Clone Name | rbart15a08 |
---|---|
Clone Library Name | barley_pub |
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 43.1 bits (100), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTD +RYAAM+PECKRDRDV Sbjct: 274 CTDHDRYAAMAPECKRDRDV 293
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 36.6 bits (83), Expect = 0.017 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTDR+RY+ + PEC RDRD+ Sbjct: 273 CTDRKRYSQVPPECTRDRDI 292
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 35.4 bits (80), Expect = 0.037 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTDR+RY + PEC +DRD+ Sbjct: 276 CTDRKRYPTLPPECTKDRDI 295
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 34.7 bits (78), Expect = 0.064 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTDR RY + PEC+R+RD+ Sbjct: 274 CTDRTRYPQLPPECRRNRDI 293
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 33.9 bits (76), Expect = 0.11 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTDR R+ M EC+RDRDV Sbjct: 276 CTDRTRFPVMPAECRRDRDV 295
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 33.5 bits (75), Expect = 0.14 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTDR R+ PEC+RDRD+ Sbjct: 274 CTDRVRFPVPPPECRRDRDI 293
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 33.5 bits (75), Expect = 0.14 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRD 236 CTDR R+ M ECKRDRD Sbjct: 277 CTDRTRFPVMPAECKRDRD 295
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 32.7 bits (73), Expect = 0.24 Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%) Frame = -3 Query: 292 CTDRERYAAMSP-ECKRDRDV 233 CTD +RY +SP ECKRDRD+ Sbjct: 275 CTDTKRYPHISPPECKRDRDI 295
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 32.0 bits (71), Expect = 0.41 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 292 CTDRERYAAMSPECKRDRDV 233 CTD+ RY PEC +DRD+ Sbjct: 277 CTDKARYPVPPPECTKDRDI 296
>SWC4_CRYNE (Q5KG22) SWR1-complex protein 4| Length = 463 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -3 Query: 280 ERYAAMSPEC-KRDRDV*A*YTLLTTTDVKDRYYSSC 173 +RYA +SPE KR R V D+KDRYY+ C Sbjct: 162 DRYAYVSPEGEKRKRSV---------EDMKDRYYTIC 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,751,368 Number of Sequences: 219361 Number of extensions: 499827 Number of successful extensions: 1090 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1088 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)