ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sem... 28 8.8

>SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sema G)|
          Length = 1093

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 178 CPP*RCWCCSSA*GQCSLSCDSG 110
           CP    W C +A  QCS SC  G
Sbjct: 849 CPVRGAWSCWTAWSQCSASCGGG 871


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.122    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,613,275
Number of Sequences: 219361
Number of extensions: 425409
Number of successful extensions: 1158
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
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