ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart15a02 |
|---|---|
| Clone Library Name | barley_pub |
>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)| (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 Score = 68.6 bits (166), Expect = 7e-12 Identities = 28/31 (90%), Positives = 31/31 (100%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MFNENQKD+GVEQNWGLFYPNMQHVYPI+F Sbjct: 282 AMFNENQKDSGVEQNWGLFYPNMQHVYPINF 312
>E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GVI precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) Length = 321 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MFNENQK GVEQN+G+F P+M VY + F Sbjct: 286 AMFNENQKPEGVEQNFGMFQPDMSQVYHVDF 316
>E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) Length = 316 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNG-VEQNWGLFYPNMQHVYPISF 365 +MFNEN+K VE+N+GLF+PN Q VYP +F Sbjct: 283 AMFNENRKPGDEVERNFGLFFPNKQPVYPTTF 314
>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 370 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+ENQK +E+++G+FYPN Q YP F Sbjct: 316 AMFDENQKSPELEKHFGVFYPNKQKKYPFGF 346
>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4| glucanase) Length = 370 Score = 38.5 bits (88), Expect = 0.008 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q YP+SF Sbjct: 316 AMFDENNKNPELEKHFGLFSPNKQPKYPLSF 346
>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII) ((1->3)-beta-glucanase isoenzyme GIII) (Beta-1,3-endoglucanase GIII) Length = 330 Score = 37.7 bits (86), Expect = 0.014 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNG-VEQNWGLFYPNMQHVYPISF 365 +MFNEN KD +E+N+GLF PNM Y I+F Sbjct: 299 AMFNENLKDGDELEKNFGLFKPNMSPAYAITF 330
>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) Length = 327 Score = 37.7 bits (86), Expect = 0.014 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDN-GVEQNWGLFYPNMQHVYPISF 365 +MFNENQK E+++GLFYPN + VY I+F Sbjct: 277 AMFNENQKPGLETERHFGLFYPNKRPVYHINF 308
>E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) Length = 350 Score = 37.4 bits (85), Expect = 0.018 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN+K +E++WGLF P Q Y ISF Sbjct: 319 AMFDENRKTPELEKHWGLFSPTKQPKYQISF 349
>E13H_TOBAC (P36401) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q'| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) Length = 339 Score = 37.0 bits (84), Expect = 0.024 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 ++F+E+QKD +E+++GLF NMQ Y ISF Sbjct: 308 ALFDEDQKDPEIEKHFGLFSANMQPKYQISF 338
>E13A_ARATH (P33157) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Pathogenesis-related protein 2) (PR-2) (Beta-1,3-glucanase 2) Length = 339 Score = 37.0 bits (84), Expect = 0.024 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN+K+ E+ WGLF+P+ Q Y ++F Sbjct: 308 AMFDENKKEPTYEKFWGLFHPDRQSKYEVNF 338
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 36.2 bits (82), Expect = 0.041 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = -2 Query: 454 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF**GSS 350 ++NE+++ V E+NWG+ +PN VYP+S GSS Sbjct: 317 LYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSS 352
>E13B_PHAVU (P23535) Glucan endo-1,3-beta-glucosidase, basic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 348 Score = 35.8 bits (81), Expect = 0.054 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+ENQK +E+++GLF P+ + YP F Sbjct: 285 AMFDENQKSPEIEKHFGLFKPSKEKKYPFGF 315
>E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) [Contains: Glucan endo-1,3-beta-glucosidase minor form 3; Glucan endo Length = 374 Score = 35.0 bits (79), Expect = 0.092 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN+K VE+++GLF+PN Y ++F Sbjct: 321 AMFDENKKQPEVEKHFGLFFPNKWQKYNLNF 351
>E13E_TOBAC (P23546) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GGIB50 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLA) Length = 370 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y I+F Sbjct: 317 AMFDENNKNPELEKHFGLFSPNKQPKYNINF 347
>E13B_TOBAC (P15797) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 371 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y I+F Sbjct: 318 AMFDENNKNPELEKHFGLFSPNKQPKYNINF 348
>E13F_TOBAC (P27666) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLB) Length = 370 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y ++F Sbjct: 317 AMFDENNKNPELEKHFGLFSPNKQPKYNLNF 347
>E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 365 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y ++F Sbjct: 317 AMFDENNKNPELEKHFGLFSPNKQPKYNLNF 347
>E132_SOLTU (P52401) Glucan endo-1,3-beta-glucosidase, basic isoform 2| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 363 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y ++F Sbjct: 309 AMFDENNKNPELEKHFGLFSPNKQPKYNLNF 339
>E131_SOLTU (P52400) Glucan endo-1,3-beta-glucosidase, basic isoform 1| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 337 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y ++F Sbjct: 283 AMFDENNKNPELEKHFGLFSPNKQPKYNLNF 313
>E133_SOLTU (P52402) Glucan endo-1,3-beta-glucosidase, basic isoform 3| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 328 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++GLF PN Q Y ++F Sbjct: 274 AMFDENNKNPELEKHFGLFSPNKQPKYNLNF 304
>E13C_TOBAC (P23432) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 351 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNGV-EQNWGLFYPNMQHVYPISF 365 +MF+EN+K+ V E+++GLFYPN Y ++F Sbjct: 315 AMFDENEKNGEVTEKHFGLFYPNRTAKYQLNF 346
>E13B_MAIZE (P49237) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 335 Score = 33.5 bits (75), Expect = 0.27 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNGV-EQNWGLFYPNMQHVYPISF 365 +MFNE+QK E+++GLF P+ VYPI+F Sbjct: 303 AMFNEDQKTGAESERHFGLFNPDKSPVYPINF 334
>E13B_LYCES (Q01413) Glucan endo-1,3-beta-glucosidase B precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase B) ((1->3)-beta-glucanase B) (Basic beta-1,3-glucanase) (Beta-1,3-endoglucanase B) Length = 360 Score = 33.1 bits (74), Expect = 0.35 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYPNMQHVYPISF 365 +MF+EN K+ +E+++G+F PN Q Y ++F Sbjct: 309 AMFDENNKNPELEKHFGMFSPNKQPKYNLNF 339
>E13D_TOBAC (P23433) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 351 Score = 32.7 bits (73), Expect = 0.45 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNGV-EQNWGLFYPNMQHVYPISF 365 +MF+EN+K + E+++GLFYPN Y ++F Sbjct: 315 AMFDENEKQGEITEKHFGLFYPNRAAKYQLNF 346
>E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 347 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNGVEQNWGLFYP-NMQHVYPISF 365 +MF+ENQK E+ WGLF P Q Y I+F Sbjct: 315 AMFDENQKQPEFEKFWGLFSPITKQPKYSINF 346
>E13A_HORVU (P34742) Glucan endo-1,3-beta-glucosidase GI (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GI) ((1->3)-beta-glucanase isoenzyme GI) (Beta-1,3-endoglucanase GI) Length = 310 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -2 Query: 457 SMFNENQKDNGV-EQNWGLFYPNMQHVYPISF 365 +MFNEN K + E+++GLF P+ YPI F Sbjct: 278 AMFNENFKTGELTEKHFGLFNPDKSPAYPIRF 309
>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)| Length = 804 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 286 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 179 A I +CT GLG+ W +TA + VV+AC +P Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 29.3 bits (64), Expect = 5.0 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -2 Query: 454 MFNENQKDNGV-EQNWGLFYPNMQHVYPI 371 ++NE+ + V E+NWGLFY N VY + Sbjct: 314 LYNEDTRPGPVSEKNWGLFYTNGTPVYTL 342
>THT1_SCHPO (Q09684) Nuclear fusion protein tht1| Length = 577 Score = 29.3 bits (64), Expect = 5.0 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 131 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 235 RGS C +E+ + W+ S SH++ HL L+ Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148
>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)| Length = 310 Score = 29.3 bits (64), Expect = 5.0 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -2 Query: 184 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 47 VPV+++F+ +AY +D ++ YTH+ P FK+S+K Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,822,710 Number of Sequences: 219361 Number of extensions: 1159044 Number of successful extensions: 2503 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2503 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
