Clone Name | rbart14h12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete sequence Length = 31404 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 12 ctgcagcagggattgcacctcctcacgactggacccactcagtcgggtattggtaatgac 71 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 21376 ctgcagcagggattgcacctcctcacgactggactcactcagtcgggtattggtaatgac 21317 Query: 72 atccgataacgagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 131 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21316 atccgataaggagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 21257 Query: 132 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21256 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 21197 Query: 192 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21196 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 21137 Query: 252 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21136 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 21077 Query: 312 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21076 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 21017 Query: 372 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21016 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 20957 Query: 432 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20956 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 20897 Query: 492 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20896 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 20837 Query: 552 tttagtcatccctaatcctctcaccccgattgatcacct 590 ||||||||||||||||||||||||||||||||||||||| Sbjct: 20836 tttagtcatccctaatcctctcaccccgattgatcacct 20798
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 12 ctgcagcagggattgcacctcctcacgactggacccactcagtcgggtattggtaatgac 71 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2425811 ctgcagcagggattgcacctcctcacgactggactcactcagtcgggtattggtaatgac 2425752 Query: 72 atccgataacgagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 131 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425751 atccgataaggagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 2425692 Query: 132 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425691 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 2425632 Query: 192 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425631 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 2425572 Query: 252 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425571 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 2425512 Query: 312 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425511 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 2425452 Query: 372 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425451 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 2425392 Query: 432 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425391 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 2425332 Query: 492 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2425331 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 2425272 Query: 552 tttagtcatccctaatcctctcaccccgattgatcacct 590 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2425271 tttagtcatccctaatcctctcaccccgattgatcacct 2425233
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 12 ctgcagcagggattgcacctcctcacgactggacccactcagtcgggtattggtaatgac 71 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1891240 ctgcagcagggattgcacctcctcacgactggactcactcagtcgggtattggtaatgac 1891299 Query: 72 atccgataacgagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 131 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891300 atccgataaggagatcgcagcgatcgctgtaaaggttgtccccactccaaacaacaggaa 1891359 Query: 132 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891360 ttggcggcgcagcttcatggcagtcgagggttaggggggcaaccaaggctcgcgacggtg 1891419 Query: 192 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891420 gctctagcgttcgagcaactgagcaattttactgagcaggcgcggtagctcgattggctt 1891479 Query: 252 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891480 ggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatggcgtg 1891539 Query: 312 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891540 ggcagtcagtgcaatcaccggcgtctgttgcagttcaggatcggctttgagttggcgcgt 1891599 Query: 372 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891600 ggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccggttgctc 1891659 Query: 432 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891660 gcgccgtgccgtatccacaccggcagctccatcgtgagccaagaccacttcaaaaccctt 1891719 Query: 492 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891720 gcgagtcagacggcgcgacaacatatcccaattgtcttcgttgtcttctaccaacaagat 1891779 Query: 552 tttagtcatccctaatcctctcaccccgattgatcacct 590 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1891780 tttagtcatccctaatcctctcaccccgattgatcacct 1891818
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 247 ggcttggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcgctagccatg 306 |||||||| |||||||||||||| || |||||||||||| |||| || || || |||||| Sbjct: 1811452 ggcttggtatcgtagtcgtcacaaccggcggcgatcgccctttctcggtcactggccatg 1811393 Query: 307 gcgtgggcagtcagtgcaat 326 || ||||| ||||| ||||| Sbjct: 1811392 gcatgggcggtcagggcaat 1811373
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 238 agctcgattggcttggtgtcgtagtcgtcacagcccgcggcgatcgccttttcgcgatcg 297 |||||||| |||||||| |||||| | || |||||||| || | ||||| ||||| ||| Sbjct: 1190846 agctcgatgggcttggtttcgtagccatcgcagcccgccgccagcgcctgctcgcggtcg 1190787 Query: 298 ctagccatggcgtgggcagtcagtgcaat 326 || |||||||||||||| ||||| ||||| Sbjct: 1190786 ctggccatggcgtgggcggtcagggcaat 1190758
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 365 ggcgcgtggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatccg 424 ||||||| |||||||| ||||||| || |||| |||||||||||||| |||||||||| Sbjct: 2811243 ggcgcgttgcctcccacccatccaggaccggcaggctcatatccatcaggatcagatccg 2811184 Query: 425 gt 426 || Sbjct: 2811183 gt 2811182
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 376 tcccagccatccatcactggcaagctcatatccat 410 |||||||| |||||||| |||| |||||||||||| Sbjct: 367622 tcccagccgtccatcaccggcaggctcatatccat 367588
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 238 agctcgattggcttggtgtcgtagtcgtcacagcc 272 |||||||| || || |||||||||||||||||||| Sbjct: 2473955 agctcgatcggttttgtgtcgtagtcgtcacagcc 2473921 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 364 tggcgcgtggcctcccagccatccatcactggcaagctcatatccatcaaaatcagatc 422 |||||||| |||||||| || || ||||| || | |||||| ||||||||||| ||||| Sbjct: 2473829 tggcgcgtcgcctcccaaccgtcgatcaccggtaggctcatgtccatcaaaatgagatc 2473771
>ref|NM_001035273.1| Bos taurus single stranded DNA binding protein 4 (SSBP4), mRNA Length = 1714 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 363 ttggcgcgtggcctcccagccatcca 388 |||||||| ||||||||||||||||| Sbjct: 1498 ttggcgcggggcctcccagccatcca 1473
>gb|BC107552.1| Bos taurus single stranded DNA binding protein 4, mRNA (cDNA clone MGC:128808 IMAGE:7989741), complete cds Length = 1714 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 363 ttggcgcgtggcctcccagccatcca 388 |||||||| ||||||||||||||||| Sbjct: 1498 ttggcgcggggcctcccagccatcca 1473
>ref|XM_756932.1| Ustilago maydis 521 hypothetical protein (UM05878.1) partial mRNA Length = 1446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 tcgcgatcgctagccatggcg 309 ||||||||||||||||||||| Sbjct: 1135 tcgcgatcgctagccatggcg 1155
>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence Length = 191019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 taccaacaagattttagtcat 560 ||||||||||||||||||||| Sbjct: 17371 taccaacaagattttagtcat 17391
>emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment 9/24 Length = 299350 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 gcggcgatcgccttttcgcgatcgc 298 |||||||| |||||||||||||||| Sbjct: 26602 gcggcgattgccttttcgcgatcgc 26578
>emb|AJ312391.1|CTR312391 Chloroplast transformation vector pRB70 Length = 7454 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atatcgaattcctgcagcagg 21 ||||||||||||||||||||| Sbjct: 4787 atatcgaattcctgcagcagg 4807
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gtcgtcacagcccgcggcga 280 |||||||||||||||||||| Sbjct: 236356 gtcgtcacagcccgcggcga 236337
>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence Length = 179839 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 acctcctcacgactggacccactc 51 ||||||||||||| |||||||||| Sbjct: 79053 acctcctcacgacaggacccactc 79076
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gcggcgatcgccttttcgcgatcg 297 ||||||||||||| |||||||||| Sbjct: 3381177 gcggcgatcgcctcttcgcgatcg 3381200
>gb|AC147078.2| Pan troglodytes BAC clone RP43-180L22 from 7, complete sequence Length = 217576 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 aaaggttgtccccactccaaacaa 125 |||| ||||||||||||||||||| Sbjct: 115707 aaagattgtccccactccaaacaa 115730
>ref|XM_842921.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0316) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gtcgtcacagcccgcggcga 280 |||||||||||||||||||| Sbjct: 1211 gtcgtcacagcccgcggcga 1192
>ref|XM_818329.1| Trypanosoma brucei TREU927 RAB-interacting protein (Tb10.389.1570) partial mRNA Length = 684 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cccactccaaacaacaggaa 131 |||||||||||||||||||| Sbjct: 504 cccactccaaacaacaggaa 485
>gb|AC034145.5| Homo sapiens BAC clone RP11-127A24 from 7, complete sequence Length = 162658 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 aaaggttgtccccactccaaacaa 125 |||| ||||||||||||||||||| Sbjct: 144752 aaagattgtccccactccaaacaa 144775
>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence Length = 139330 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 cttctaccaacaagatttta 555 |||||||||||||||||||| Sbjct: 110008 cttctaccaacaagatttta 110027
>gb|AE008835.1| Salmonella typhimurium LT2, section 139 of 220 of the complete genome Length = 21791 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 13277 atatccatcaaaatcagatc 13258
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 262213 atatccatcaaaatcagatc 262194
>emb|CR450777.5| Zebrafish DNA sequence from clone DKEY-16C7 in linkage group 8, complete sequence Length = 97291 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tggcctcccagccatccatc 390 |||||||||||||||||||| Sbjct: 21522 tggcctcccagccatccatc 21541
>dbj|AB196987.1| Thermotoga maritima gene for alpha-L-arabinofuranosidase, partial cds Length = 1452 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gtcgtcacagcccgcggcgatcgc 284 ||||||||||||| |||||||||| Sbjct: 642 gtcgtcacagcccacggcgatcgc 619
>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence Length = 126875 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 cttctaccaacaagatttta 555 |||||||||||||||||||| Sbjct: 64167 cttctaccaacaagatttta 64186
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ttcgttgtcttctaccaaca 547 |||||||||||||||||||| Sbjct: 3998962 ttcgttgtcttctaccaaca 3998981
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 2927676 atatccatcaaaatcagatc 2927657
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 259 tagtcgtcacagcccgcggcgatcgccttttcgcgatcgc 298 |||||||||||||| ||| || |||||||||||||||| Sbjct: 1796431 tagtcgtcacagccggcgaggagagccttttcgcgatcgc 1796392
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gttaggggggcaaccaaggc 180 |||||||||||||||||||| Sbjct: 1162941 gttaggggggcaaccaaggc 1162922
>gb|AF171069.1|AF171069 Salmonella typhimurium BarA sensor kinase (barA) gene, complete cds Length = 2961 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 2261 atatccatcaaaatcagatc 2242
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 2950108 atatccatcaaaatcagatc 2950089
>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete sequence Length = 314743 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 acctcctcacgactggacccactc 51 ||||||||||||| |||||||||| Sbjct: 225430 acctcctcacgacaggacccactc 225453
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 atatccatcaaaatcagatc 422 |||||||||||||||||||| Sbjct: 3068381 atatccatcaaaatcagatc 3068362
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 370 gtggcctcccagccatccatcactggca 397 ||||||| |||||| ||||||||||||| Sbjct: 1704590 gtggcctgccagccgtccatcactggca 1704563
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gtcgtcacagcccgcggcgatcgc 284 ||||||||||||| |||||||||| Sbjct: 297259 gtcgtcacagcccacggcgatcgc 297236 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,693,987 Number of Sequences: 3902068 Number of extensions: 3693987 Number of successful extensions: 59503 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58719 Number of HSP's gapped (non-prelim): 784 length of query: 590 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 567 effective length of database: 17,143,297,704 effective search space: 9720249798168 effective search space used: 9720249798168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)