ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart14g01 |
|---|---|
| Clone Library Name | barley_pub |
>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 76.6 bits (187), Expect = 5e-14 Identities = 42/84 (50%), Positives = 51/84 (60%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V L G V+ A++ DLILMD+ +P MDG A + P QQTPVIA+TAHAMA Sbjct: 694 VELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMA 753 Query: 335 SDREKAIAAGCDDYDTKPIELPRL 264 +EK + AG DY KPIE RL Sbjct: 754 GQKEKLLGAGMSDYLAKPIEEERL 777
>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 76.6 bits (187), Expect = 5e-14 Identities = 42/84 (50%), Positives = 51/84 (60%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V L G V+ A++ DLILMD+ +P MDG A + P QQTPVIA+TAHAMA Sbjct: 694 VELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMA 753 Query: 335 SDREKAIAAGCDDYDTKPIELPRL 264 +EK + AG DY KPIE RL Sbjct: 754 GQKEKLLGAGMSDYLAKPIEEERL 777
>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 76.6 bits (187), Expect = 5e-14 Identities = 42/84 (50%), Positives = 51/84 (60%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V L G V+ A++ DLILMD+ +P MDG A + P QQTPVIA+TAHAMA Sbjct: 694 VELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMA 753 Query: 335 SDREKAIAAGCDDYDTKPIELPRL 264 +EK + AG DY KPIE RL Sbjct: 754 GQKEKLLGAGMSDYLAKPIEEERL 777
>PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell| differentiation-controlling protein) [Includes: Diguanylate cyclase (EC 4.6.1.-) (DGC)] Length = 454 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/103 (36%), Positives = 61/103 (59%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L +LT + +EV A DG + A R+ PD+IL+D+ +P MDG+ R+LK DP + Sbjct: 17 LLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRH 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 PV+ +TA DR + + +G D+ TKPI+ L +++ L Sbjct: 77 IPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSL 119 Score = 35.4 bits (80), Expect = 0.14 Identities = 18/75 (24%), Positives = 39/75 (52%) Frame = -3 Query: 458 DLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPI 279 DL++++ + DG T L+++ +Q PV+A+ KA+ G +D ++PI Sbjct: 197 DLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPI 256 Query: 278 ELPRLLSKIAQLLER 234 + L +++ ++R Sbjct: 257 DPQELSARVKTQIQR 271
>PILH_PSEAE (P43501) Protein pilH| Length = 121 Score = 75.5 bits (184), Expect = 1e-13 Identities = 40/103 (38%), Positives = 61/103 (59%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L+ L + G +V+ A +G GV AR+E+PD++LMD+ +P ++G++ATRQL D E Sbjct: 17 LTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAI 76 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 PVI +T +D+ G DY TKP++ LL I +L Sbjct: 77 PVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVL 119
>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 75.1 bits (183), Expect = 2e-13 Identities = 41/84 (48%), Positives = 51/84 (60%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V L G V+ A++ DLILMD+ +P MDG A + P +QTPVIA+TAHAMA Sbjct: 694 VELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQRQTPVIAVTAHAMA 753 Query: 335 SDREKAIAAGCDDYDTKPIELPRL 264 +EK + AG DY KPIE RL Sbjct: 754 GQKEKLLGAGMSDYLAKPIEEERL 777
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 3/85 (3%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQT--PVIAL 354 G EVV G A V+ ++E DL+LMD+ +P MDG +AT ++A + E Q+ P++AL Sbjct: 680 GAEVVAVEGGYAAVNAVQQEAFDLVLMDVQMPGMDGRQATEAIRAWEAERNQSSLPIVAL 739 Query: 353 TAHAMASDREKAIAAGCDDYDTKPI 279 TAHAMA+++ + +G DDY TKPI Sbjct: 740 TAHAMANEKRSLLQSGMDDYLTKPI 764
>PRRA_MYCTU (P0A5Z6) Transcriptional regulatory protein prrA| Length = 233 Score = 73.2 bits (178), Expect = 6e-13 Identities = 40/105 (38%), Positives = 57/105 (54%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L R L GFEV A DGA + +A +PD I++D+++PV+DG L+A Sbjct: 23 LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDV 80 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV L+A + DR + AG DDY KP L L++++ LL R Sbjct: 81 PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>PRRA_MYCBO (P0A5Z7) Transcriptional regulatory protein prrA| Length = 233 Score = 73.2 bits (178), Expect = 6e-13 Identities = 40/105 (38%), Positives = 57/105 (54%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L R L GFEV A DGA + +A +PD I++D+++PV+DG L+A Sbjct: 23 LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMD--NDV 80 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV L+A + DR + AG DDY KP L L++++ LL R Sbjct: 81 PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory protein phoB| Length = 227 Score = 72.8 bits (177), Expect = 8e-13 Identities = 37/106 (34%), Positives = 57/106 (53%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +GFEV G + PDL+++D LP + G E R+L+ PE ++ Sbjct: 17 LLRYNLEAEGFEVDTILRGDEAEIRLQERLPDLLILDWMLPGVSGIELCRRLRQRPETER 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA S+R + +A G DDY KP P L++++ +L R Sbjct: 77 LPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRR 122
>COPR_PSESM (Q02540) Transcriptional activator protein copR| Length = 227 Score = 72.8 bits (177), Expect = 8e-13 Identities = 41/105 (39%), Positives = 55/105 (52%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L + L GF V G VD A E DL+++D+ +P +DGWE R+L+ Q Sbjct: 16 LQQGLREAGFNVDRVVTGTDAVDQALNEAYDLLILDVMMPGLDGWEVIRRLRTAG--QPV 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA DR K + G DDY KP L LL+++ LL R Sbjct: 74 PVLFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLLRR 118
>IRLR_BURPS (O31395) Transcriptional activator protein irlR| Length = 229 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/105 (36%), Positives = 54/105 (51%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L + LT GF DG G+ A E+ DLI++D+ LP DGW +L+ T Sbjct: 16 LRKGLTEAGFIADWVEDGVTGLHQAETEEYDLIILDVMLPGHDGWTVLERLR---RAHST 72 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA DR K + G DDY KP + L++++ +L R Sbjct: 73 PVLFLTARDDVGDRVKGLELGADDYVVKPFDFVELVARVRSILRR 117
>YYCF_BACSU (P37478) Transcriptional regulatory protein yycF| Length = 235 Score = 71.6 bits (174), Expect = 2e-12 Identities = 40/106 (37%), Positives = 58/106 (54%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L ++G+EV AHDG V+ QPDLIL+D+ LP DG E R+++ ++ Sbjct: 17 ILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDM-- 74 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA D+ + G DDY TKP LL+++ L R Sbjct: 75 -PIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRR 119
>PRRA_MYCLE (Q50136) Transcriptional regulatory protein prrA| Length = 233 Score = 71.6 bits (174), Expect = 2e-12 Identities = 40/105 (38%), Positives = 56/105 (53%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L R L GFEV A DGA + A +PD I++D+++PV+DG L+A Sbjct: 23 LERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPVLDGVSVVTALRAMD--NDV 80 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV L+A + DR + AG DDY KP L L++++ LL R Sbjct: 81 PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>CZCR_RALME (Q44006) Transcriptional activator protein czcR| Length = 225 Score = 69.7 bits (169), Expect = 7e-12 Identities = 37/105 (35%), Positives = 58/105 (55%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L + L+ GF V +A++G G+ A D+I++D+ LP MDGW + +++ E T Sbjct: 16 LQKGLSESGFVVDIANNGGDGLHMAEETDYDVIILDVMLPGMDGWTVIKSIRSKSE---T 72 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA +DR + G DDY KP LL++I + L + Sbjct: 73 PVLFLTALDDVADRVRGFELGADDYLVKPFAFAELLARIRRCLRQ 117
>YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 240 Score = 69.3 bits (168), Expect = 9e-12 Identities = 35/106 (33%), Positives = 62/106 (58%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RL+ G++V+ A DG + +RE P+L+++D+ +P +DG+ ++L+ + ++ Sbjct: 18 ILETRLSIIGYDVISAADGEEALSIFKREHPNLVVLDLMMPKLDGYGVCQELRKESDV-- 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA + SDR + G DDY KP L ++I +L R Sbjct: 76 -PIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRR 120
>YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG| Length = 228 Score = 69.3 bits (168), Expect = 9e-12 Identities = 38/106 (35%), Positives = 57/106 (53%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +G+ V + H+G G+D A L+L+D+ LP + G E R+L+ Q Sbjct: 18 VLQLELEYEGYSVTIKHNGTEGLDAAAEGGYSLVLLDVMLPGLSGLEVLRRLRKTDS--Q 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TPVI LTA D+ + G +DY TKP E+ LL++I L + Sbjct: 76 TPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEELLARIRAALRQ 121
>PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR| Length = 226 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/105 (33%), Positives = 58/105 (55%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L + L +G++ L ++G G+ A + Q DLI++D+ LP +DGW+ L+ + Sbjct: 17 LQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDGWQIISALRESG--HEE 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA D+ K + G DDY KP + L++++ LL R Sbjct: 75 PVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRR 119
>ARLR_STAAW (P0C001) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>ARLR_STAAU (Q9KJN4) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>ARLR_STAAS (Q6G9E6) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>ARLR_STAAR (Q6GGZ3) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>ARLR_STAAM (P0C000) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>ARLR_STAAC (Q5HG04) Response regulator arlR| Length = 219 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>PHOP_BACSU (P13792) Alkaline phosphatase synthesis transcriptional regulatory| protein phoP Length = 240 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/106 (33%), Positives = 58/106 (54%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R G++V+ A DG + A E+PDLI++D+ LP +DG E +QL+ + Sbjct: 17 LLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLR--QQKLM 74 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA D+ + G DDY TKP + +++ +L R Sbjct: 75 FPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR 120
>ARLR_STAAN (Q99U73) Response regulator arlR| Length = 214 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/105 (34%), Positives = 59/105 (56%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LT + + V +DG G+D A DLI++D+ LP ++G E R+++ + Q T Sbjct: 17 LELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIR---QQQST 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA + D+ + G DDY KP ++ LL++I +L R Sbjct: 74 PIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 239 Score = 68.2 bits (165), Expect = 2e-11 Identities = 36/106 (33%), Positives = 60/106 (56%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RL+ G+EVV A DG + + E P+L+++D+ +P +DG+ ++L+ + ++ Sbjct: 20 ILETRLSMIGYEVVTAADGEEALTIFQLEHPNLVVLDVMMPKLDGYGVCQELRKESDI-- 77 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA +DR + G DDY KP L ++I LL R Sbjct: 78 -PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122
>CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR| Length = 227 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/105 (36%), Positives = 56/105 (53%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L++ LT GF V LA +G G A DLI++D+ LP ++GW+ R L++ + Sbjct: 16 LTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRS--ANKGM 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA R K + G DDY KP LL+++ LL R Sbjct: 74 PILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR| Length = 227 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/105 (36%), Positives = 56/105 (53%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L++ LT GF V LA +G G A DLI++D+ LP ++GW+ R L++ + Sbjct: 16 LTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRS--ANKGM 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA R K + G DDY KP LL+++ LL R Sbjct: 74 PILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR| Length = 227 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/105 (36%), Positives = 56/105 (53%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L++ LT GF V LA +G G A DLI++D+ LP ++GW+ R L++ + Sbjct: 16 LTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRS--ANKGM 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA R K + G DDY KP LL+++ LL R Sbjct: 74 PILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>PFER_PSEAE (Q04803) Transcriptional activator protein pfeR| Length = 305 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/105 (36%), Positives = 54/105 (51%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L R+GF V + DG+ G++ A RE DL+L+D+ LP +DG L+ + Q T Sbjct: 93 LDAHFRRRGFRVTVCGDGSHGLEAAGREAFDLVLLDIMLPGLDGLALLESLRRE---QAT 149 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ ++A DR G DDY KP L L ++ LL R Sbjct: 150 PVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARTDALLRR 194
>YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 254 Score = 67.0 bits (162), Expect = 4e-11 Identities = 34/106 (32%), Positives = 60/106 (56%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RL+ G+ VV A DG ++ +E PD++++D+ +P +DG+ ++++ D ++ Sbjct: 29 ILETRLSMIGYFVVTASDGEEALNLFHQEMPDVVILDIMMPKLDGYGVCQEIRKDSDV-- 86 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA +DR + G DDY KP L ++I +L R Sbjct: 87 -PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
>SILR_SALTY (Q9ZHD3) Probable transcriptional regulatory protein silR| Length = 228 Score = 67.0 bits (162), Expect = 4e-11 Identities = 38/105 (36%), Positives = 56/105 (53%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 LS+ LT GF V A +G G A + DL+++D+ LP ++GW+ R L++ + Sbjct: 16 LSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRSAG--KGM 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA R K + G DDY KP LL+++ LL R Sbjct: 74 PVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 243 Score = 66.6 bits (161), Expect = 6e-11 Identities = 35/106 (33%), Positives = 59/106 (55%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RLT G+EV+ A +G + R+E P L+++D+ +P +DG+ ++L+ + ++ Sbjct: 20 ILETRLTIIGYEVITASNGEEALIIFRKEYPSLVVLDVMMPKLDGYGVCQELRKESDV-- 77 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA DR + G DDY KP L ++I +L R Sbjct: 78 -PIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>YCF29_PORPU (P51343) Probable transcriptional regulator ycf29| Length = 209 Score = 66.6 bits (161), Expect = 6e-11 Identities = 37/101 (36%), Positives = 56/101 (55%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L +GF V +A +G A + + DLI+ D+ +P++DG+E +L+ +L + PVI Sbjct: 22 LIDQGFNVDIALNGLEAFQLANKYKFDLIISDIIMPIIDGYELLEKLRKIDKLAKIPVIF 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA M DR K GC Y +KP + L+S I L+ R Sbjct: 82 LTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKNLIYR 122
>AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1| Length = 225 Score = 65.9 bits (159), Expect = 1e-10 Identities = 38/105 (36%), Positives = 58/105 (55%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L LTR+G V A G G+ R ++PDLI++D+ LP +DG+E R+++ Q Sbjct: 17 LELSLTRQGHRVATAASGEDGLKLLREQRPDLIVLDVMLPGIDGFEVCRRIR---RTDQL 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA D + +G DDY KP++ L ++I +L R Sbjct: 74 PIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRR 118
>YXDJ_BACSU (P42421) Sensory transduction protein yxdJ| Length = 229 Score = 65.9 bits (159), Expect = 1e-10 Identities = 36/106 (33%), Positives = 61/106 (57%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L + G++ V+A D A +D RE+PD++L+D++LP DG+ RQ++ + Sbjct: 16 LLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIR---QHST 72 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +P+I ++A + D+ AI G DDY KP +L+KI + R Sbjct: 73 SPIIFISARSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRR 118
>YEDW_ECOLI (P76340) Probable transcriptional regulatory protein yedW| Length = 223 Score = 65.5 bits (158), Expect = 1e-10 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 +++ L+ G+ + DG G+ A ++ LI++D+ LP MDGW+ + L+ +QT Sbjct: 16 VTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRT---AKQT 72 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI-AQL 243 PVI LTA DR + + +G +DY KP LL+++ AQL Sbjct: 73 PVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQL 115
>PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/101 (34%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + GF+ V A D + V+ PDLIL+D LP G + + LK + + PV+ Sbjct: 22 LEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVM 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA DR + + G DDY TKP L+++I ++ R Sbjct: 82 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/101 (34%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + GF+ V A D + V+ PDLIL+D LP G + + LK + + PV+ Sbjct: 22 LEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVM 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA DR + + G DDY TKP L+++I ++ R Sbjct: 82 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/101 (34%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + GF+ V A D + V+ PDLIL+D LP G + + LK + + PV+ Sbjct: 22 LEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVM 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA DR + + G DDY TKP L+++I ++ R Sbjct: 82 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/101 (34%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + GF+ V A D + V+ PDLIL+D LP G + + LK + + PV+ Sbjct: 22 LEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVM 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA DR + + G DDY TKP L+++I ++ R Sbjct: 82 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>CPXR_SHIFL (P0AE90) Transcriptional regulatory protein cpxR| Length = 232 Score = 65.1 bits (157), Expect = 2e-10 Identities = 42/112 (37%), Positives = 60/112 (53%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +GF V++AHDG +D + DL+L+D+ +P +G + LKA + Q Sbjct: 16 LLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNGIDT---LKALRQTHQ 71 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 TPVI LTA DR + G DDY KP L+++I +L R SH E Sbjct: 72 TPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR-SHWSE 122
>CPXR_ECOLI (P0AE88) Transcriptional regulatory protein cpxR| Length = 232 Score = 65.1 bits (157), Expect = 2e-10 Identities = 42/112 (37%), Positives = 60/112 (53%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +GF V++AHDG +D + DL+L+D+ +P +G + LKA + Q Sbjct: 16 LLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNGIDT---LKALRQTHQ 71 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 TPVI LTA DR + G DDY KP L+++I +L R SH E Sbjct: 72 TPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR-SHWSE 122
>CPXR_ECO57 (P0AE89) Transcriptional regulatory protein cpxR| Length = 232 Score = 65.1 bits (157), Expect = 2e-10 Identities = 42/112 (37%), Positives = 60/112 (53%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +GF V++AHDG +D + DL+L+D+ +P +G + LKA + Q Sbjct: 16 LLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNGIDT---LKALRQTHQ 71 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 TPVI LTA DR + G DDY KP L+++I +L R SH E Sbjct: 72 TPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR-SHWSE 122
>TCTD_SALTY (P22104) Transcriptional regulatory protein tctD| Length = 224 Score = 65.1 bits (157), Expect = 2e-10 Identities = 38/105 (36%), Positives = 55/105 (52%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L + L + GF V DG A E L ++D+++P MDG E ++L+ Q Sbjct: 16 LEKALVQNGFAVDCVFDGLAADHLLHSEMYALAVLDINMPGMDGLEVVQRLRKRG--QTL 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA + +DR K + G DDY KP EL L +++ LL R Sbjct: 74 PVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALLRR 118
>YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ| Length = 227 Score = 64.7 bits (156), Expect = 2e-10 Identities = 36/99 (36%), Positives = 51/99 (51%) Frame = -3 Query: 530 RKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALT 351 ++GFE HDG G E DLI++D+ LP MDG R+++ E P+I LT Sbjct: 22 KEGFEAEFVHDGLEGYQRFTEENWDLIILDIMLPSMDGVTICRKIR---ETSTVPIIMLT 78 Query: 350 AHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A SD+ G DDY TKP L+++I ++ R Sbjct: 79 AKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVIRR 117
>YSO1_PLEBO (P51586) Hypothetical 14.6 kDa protein in sodA1 3'region (ORF131)| Length = 131 Score = 64.7 bits (156), Expect = 2e-10 Identities = 34/102 (33%), Positives = 59/102 (57%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L +G V +A + + RE P L++ D+++P MDG+E +++ P+ + Sbjct: 21 LLRFMLEDEGAIVTVAPNAKEALSLLERELPKLLVSDVAMPEMDGFELIGRVRELPKGET 80 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 246 P IALTA+A DR+ A+ +G +DY TKP++ L+ + Q Sbjct: 81 LPAIALTAYAREEDRQAALRSGFNDYLTKPVDPLELIRLVQQ 122
>PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 64.7 bits (156), Expect = 2e-10 Identities = 35/101 (34%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + GF+ V A D + V+ PDLIL+D LP G + + LK + + PV+ Sbjct: 22 LEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGLQFIKLLKREAMTRDIPVVM 81 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA DR + + G DDY TKP L+++I ++ R Sbjct: 82 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 255 Score = 63.9 bits (154), Expect = 4e-10 Identities = 33/106 (31%), Positives = 61/106 (57%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RL+ G+EV+ A DG + + +E P+L+++D+ +P +DG+ ++++ + ++ Sbjct: 22 ILETRLSIIGYEVLTAPDGRSALFLFHKEHPNLVVLDVMMPKIDGYGVCQEIRKESDI-- 79 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA +DR + G DDY KP L ++I +L R Sbjct: 80 -PIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRR 124
>REGX3_MYCTU (Q11156) Sensory transduction protein regX3| Length = 227 Score = 63.5 bits (153), Expect = 5e-10 Identities = 35/101 (34%), Positives = 53/101 (52%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L ++GFE + DG A + R D++L+D+ LP M G + +QL+A PVI Sbjct: 21 LRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA---RSSVPVIM 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +TA D+ + G DDY TKP L+++I +L R Sbjct: 78 VTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>REGX3_MYCBO (O07130) Sensory transduction protein regX3| Length = 227 Score = 63.5 bits (153), Expect = 5e-10 Identities = 35/101 (34%), Positives = 53/101 (52%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L ++GFE + DG A + R D++L+D+ LP M G + +QL+A PVI Sbjct: 21 LRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA---RSSVPVIM 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +TA D+ + G DDY TKP L+++I +L R Sbjct: 78 VTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>REGX3_MYCSM (Q9F868) Sensory transduction protein regX3| Length = 228 Score = 63.5 bits (153), Expect = 5e-10 Identities = 34/101 (33%), Positives = 53/101 (52%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L ++GFE + DG + + R D++L+D+ LP M G + +QL+A PVI Sbjct: 21 LRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSGTDVCKQLRA---RSSVPVIM 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +TA D+ + G DDY TKP L+++I +L R Sbjct: 78 VTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyrophosphate-lyase| 2) (Adenylyl cyclase 2) (AC2) Length = 352 Score = 63.2 bits (152), Expect = 6e-10 Identities = 33/97 (34%), Positives = 54/97 (55%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G+EV+ D ++ + QP ++L D+ +P +DG E +LK P +Q PVI LTA+ Sbjct: 31 GYEVMCFQDPYEALEQVGKVQPAIVLSDLDMPGIDGLELCWRLKESPS-RQVPVIILTAN 89 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 ++R K + AG DDY K + L ++I ++ R Sbjct: 90 DSEAERVKGLRAGADDYVNKSASMAELSARIESVMRR 126
>MTRA_MYCTU (P0A5Z4) DNA-binding response regulator mtrA| Length = 225 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/106 (33%), Positives = 56/106 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 ML+ L +GF+ + DG + R +PDL+L+D+ LP M+G + R L+AD Sbjct: 17 MLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD---SG 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA D + +G DDY KP + L++++ L R Sbjct: 74 VPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119
>MTRA_MYCPA (Q93CB8) DNA-binding response regulator mtrA| Length = 225 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/106 (33%), Positives = 56/106 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 ML+ L +GF+ + DG + R +PDL+L+D+ LP M+G + R L+AD Sbjct: 17 MLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD---SG 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA D + +G DDY KP + L++++ L R Sbjct: 74 VPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119
>MTRA_MYCLE (Q9CCJ2) DNA-binding response regulator mtrA| Length = 225 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/106 (33%), Positives = 56/106 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 ML+ L +GF+ + DG + R +PDL+L+D+ LP M+G + R L+AD Sbjct: 17 MLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD---SG 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA D + +G DDY KP + L++++ L R Sbjct: 74 VPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119
>MTRA_MYCBO (P0A5Z5) DNA-binding response regulator mtrA| Length = 225 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/106 (33%), Positives = 56/106 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 ML+ L +GF+ + DG + R +PDL+L+D+ LP M+G + R L+AD Sbjct: 17 MLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD---SG 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA D + +G DDY KP + L++++ L R Sbjct: 74 VPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119
>EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 62.8 bits (151), Expect = 8e-10 Identities = 35/103 (33%), Positives = 61/103 (59%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R+L G++V A DG + + DL++ D+++P MDG+E TR+L+ + Sbjct: 973 LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLR--EQNSS 1030 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 P+ LTA+A A++REK ++ G + KP+ L L + ++QL Sbjct: 1031 LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQL 1073
>YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2)| Length = 444 Score = 62.8 bits (151), Expect = 8e-10 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQ 375 +L RLT +G+ VV A GA G+ RE+ DL++ D+ + MDG + ++ K P + Sbjct: 20 LLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGM- 78 Query: 374 QTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PVI LTAH D A G + TKP++ L I LE+ Sbjct: 79 --PVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQ 123
>YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA| Length = 444 Score = 62.8 bits (151), Expect = 8e-10 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQ 375 +L RLT +G+ VV A GA G+ RE+ DL++ D+ + MDG + ++ K P + Sbjct: 20 LLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGM- 78 Query: 374 QTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PVI LTAH D A G + TKP++ L I LE+ Sbjct: 79 --PVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQ 123
>ATOC_ECOLI (Q06065) Acetoacetate metabolism regulatory protein atoC| (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) Length = 461 Score = 62.4 bits (150), Expect = 1e-09 Identities = 36/112 (32%), Positives = 61/112 (54%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 MLS +GFE A++G + PD++LMD+ +P MDG +A +++++ + Sbjct: 19 MLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHE--TR 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 TPVI +TA+A +A+ G DY KP +L L + + L+ S ++E Sbjct: 77 TPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKE 128
>CREB_ECOLI (P08368) Transcriptional regulatory protein creB| Length = 229 Score = 62.0 bits (149), Expect = 1e-09 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVI 360 L ++GF V + G +D AR++ PD++++D+ LP + G+E RQL A P L PV+ Sbjct: 23 LQQEGFAVEVFERGLPVLDKARKQVPDVMILDVGLPDISGFELCRQLLALHPAL---PVL 79 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA + DR + G DDY KP + +++ LL R Sbjct: 80 FLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR 121
>QSEB_HAEIN (P45337) Transcriptional regulatory protein qseB| Length = 221 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/101 (32%), Positives = 54/101 (53%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 LT+ GF V DG G+ D +++D++LP +DG E +Q +++ Q PV+ Sbjct: 20 LTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNH--QDVPVLI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA +R K + +G DDY KP L + +++ L+ R Sbjct: 78 LTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118
>SRRA_STAAW (Q7A0U4) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAU (Q9L524) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAS (Q6G972) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAR (Q6GGK6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAN (Q7A5H6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAM (Q7A2R6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAC (Q5HFT0) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 35/106 (33%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ FE+ A +G + A IL+D+ LP MDG + +L+ E +Q Sbjct: 17 LLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLR---EHKQ 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + +G DDY KP ++ ++ LL R Sbjct: 74 TPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>CHVI_AGRTU (Q07783) Transcriptional regulatory protein chvI| Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 37/109 (33%), Positives = 55/109 (50%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 +S L R+G+ V DGA+ VD P L + D+ +P MDG E R+L+ ++ Sbjct: 17 VSIALEREGYRVETYTDGASAVDGLIARPPQLAIFDIKMPRMDGMELLRRLRQKSDI--- 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHR 222 PVI LT+ D + G DD+ TKP L+ ++ +L R S R Sbjct: 74 PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRASSR 122
>EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 60.1 bits (144), Expect = 5e-09 Identities = 34/103 (33%), Positives = 60/103 (58%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R+L G++V A DG + + DL++ D+++P +DG+E TR+L+ + Sbjct: 973 LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNVDGFELTRKLR--EQNSS 1030 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 P+ LTA+A A++REK + G + KP+ L L + ++QL Sbjct: 1031 LPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQL 1073
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 59.7 bits (143), Expect = 7e-09 Identities = 31/107 (28%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L+ +L G++ A+DG ++ + D++L D+++P MDG+ T++++ +L Sbjct: 839 LLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRLTQRIR---QLGL 895 Query: 371 T-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 T PV+ +TA+A+A ++++ + +G D +KP+ L L +A ER Sbjct: 896 TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALKQTLAVYAER 942
>MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe suppressor 4)| Length = 522 Score = 59.7 bits (143), Expect = 7e-09 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 26/128 (20%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ- 375 +L + ++ +A DG ++ +++ LILMD+ LP M G E T++++ L Sbjct: 376 ILETFMKKRNISSEVAKDGLEALEKWKKKSFHLILMDIQLPTMSGIEVTQEIRRLERLNA 435 Query: 374 -----------------------QTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELP 270 Q+PVI ALTA ++ +DR +A+AAGC+D+ TKP+ L Sbjct: 436 IGVGAPKLTQPIPEKDQLNENKFQSPVIIVALTASSLMADRNEALAAGCNDFLTKPVSLV 495 Query: 269 RLLSKIAQ 246 L KI + Sbjct: 496 WLEKKITE 503
>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC| 2.7.13.3) (Mcs4-associated kinase 1) (His-Asp phosphorelay kinase phk3) Length = 1639 Score = 59.3 bits (142), Expect = 9e-09 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 6/110 (5%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPD---LILMDMSLPVMDGWEA---TRQLKA 390 ++SR L R G + + DG V+ +RE+P+ LILMD+ +PVMDG++A R+ + Sbjct: 1520 VISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPVMDGYQACNEIRKYEL 1579 Query: 389 DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 + + + P++AL+A+A+ +G D Y KPI L L I+ +L Sbjct: 1580 ENDYPKVPIVALSANALPHVVLSCKDSGFDSYLAKPITLQHLSLIISGIL 1629
>DLTR_STRA5 (P0A4I0) Transcriptional regulatory protein dltR| Length = 224 Score = 59.3 bits (142), Expect = 9e-09 Identities = 34/95 (35%), Positives = 51/95 (53%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L KG+ V LA DG G++ DL+L+D+ LP G ++++ +TP+I Sbjct: 20 LADKGYSVDLAFDGDDGLEYILTGLYDLVLLDIMLPKRSGLSVLKRVREAG--LETPIIF 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 LTA + D+ + G DDY TKP E LL++I Sbjct: 78 LTAKSQTYDKVNGLDLGADDYITKPFEADELLARI 112
>DLTR_STRA3 (P0A4H9) Transcriptional regulatory protein dltR| Length = 224 Score = 59.3 bits (142), Expect = 9e-09 Identities = 34/95 (35%), Positives = 51/95 (53%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L KG+ V LA DG G++ DL+L+D+ LP G ++++ +TP+I Sbjct: 20 LADKGYSVDLAFDGDDGLEYILTGLYDLVLLDIMLPKRSGLSVLKRVREAG--LETPIIF 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 LTA + D+ + G DDY TKP E LL++I Sbjct: 78 LTAKSQTYDKVNGLDLGADDYITKPFEADELLARI 112
>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/107 (28%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L+ +L G++ A+DG ++ + D++L D+++P MDG+ T++++ +L Sbjct: 839 LLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRLTQRIR---QLGL 895 Query: 371 T-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 T PV+ +TA+A+A ++++ + +G D +KP+ L L +A ER Sbjct: 896 TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLAVYAER 942
>YRKP_BACSU (P54443) Hypothetical sensory transduction protein yrkP| Length = 231 Score = 58.5 bits (140), Expect = 2e-08 Identities = 32/106 (30%), Positives = 56/106 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L LTR G+EV+ A DG + + DL+++D+ +P + G E + ++ + Sbjct: 17 LLEESLTRAGYEVLRAKDGKRALQLVN-DSLDLVILDIMMPGISGIETCQHIRKSSNV-- 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P++ LTA + D+ + + AG DDY TKP L +++ L R Sbjct: 74 -PILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEELHARVIAQLRR 118
>PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 58.5 bits (140), Expect = 2e-08 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 M++ L G+E + A + +PDLIL+D LP G E R+LK D Sbjct: 18 MIAVALEMAGYECLEAENTQQAHAVIVDRKPDLILLDWMLPGTSGIELARRLKRDELTVD 77 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA ++ + + G DDY TKP L++++ +L R Sbjct: 78 IPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRR 123
>RESD_BACSU (P35163) Transcriptional regulatory protein resD| Length = 240 Score = 58.5 bits (140), Expect = 2e-08 Identities = 34/106 (32%), Positives = 54/106 (50%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ + + A +G + DLIL+D+ +P DG E RQ++ E + Sbjct: 21 LLRMYLERENYAIDEAENGDEAIAKGLEANYDLILLDLMMPGTDGIEVCRQIR---EKKA 77 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I LTA ++R + AG DDY KP ++ ++ LL R Sbjct: 78 TPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRR 123
>CHEY_BACSU (P24072) Chemotaxis protein cheY homolog| Length = 119 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ 375 M+ L + GFEVV A +GA V+ + PDL+ MD+++P MDG A +++K Sbjct: 16 MIKDILVKNGFEVVAEAENGAQAVEKYKEHSPDLVTMDITMPEMDGITALKEIKQID--A 73 Query: 374 QTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 Q +I +A S AI AG D+ KP + R+L I + L Sbjct: 74 QARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTL 118
>TCSA_EMENI (Q9P896) Two-component system protein A (EC 2.7.13.3)| Length = 719 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Frame = -3 Query: 506 AHDGAAGVDTARRE--QPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMAS 333 A +GA V R++ D+ILMD+S+PV+DG AT Q++ D L P+IA+T +AM Sbjct: 590 AWNGAEAVRMVRQKPLSYDIILMDVSMPVLDGLAATEQIR-DMGLTM-PIIAITGNAMKG 647 Query: 332 DREKAIAAGCDDYDTKPIELPRLL 261 D E IA G DD KP+ +LL Sbjct: 648 DAETYIAQGMDDCICKPVHRDQLL 671
>CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (Response| regulator sokA) Length = 231 Score = 57.8 bits (138), Expect = 3e-08 Identities = 33/101 (32%), Positives = 51/101 (50%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L +GF V G GVD + DLIL+D++LP M G + R L+ TP++ Sbjct: 20 LKSEGFNVYTTDLGEEGVDLGKIYDYDLILLDLNLPDMSGIDVLRTLRV--AKINTPIMI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 L+ + + K A G DDY TKP ++++I ++ R Sbjct: 78 LSGSSEIDTKVKTFAGGADDYMTKPFHKDEMIARIHAVVRR 118
>RPRY_BACFR (Q9AE24) Transcriptional regulatory protein rprY| Length = 236 Score = 57.8 bits (138), Expect = 3e-08 Identities = 33/106 (31%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L KG+ L DG AG + + DL + D+ +P DG+ ++++A + Sbjct: 22 LLREYLQAKGYSAELYPDGEAGFKAFLKNKYDLCVFDVMMPKKDGFTLAQEVRAANA--E 79 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA + D + G DDY TKP + L +I +L R Sbjct: 80 IPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRR 125
>KDPE_ECOLI (P21866) KDP operon transcriptional regulatory protein kdpE| Length = 225 Score = 57.8 bits (138), Expect = 3e-08 Identities = 39/112 (34%), Positives = 55/112 (49%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L L G V A G+ A +PDLI++D+ LP DG E R L+ + Sbjct: 17 LRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLR---QWSAV 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI L+A + SD+ A+ AG DDY +KP + L +++ L R S P Sbjct: 74 PVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAP 125
>YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL| Length = 226 Score = 57.4 bits (137), Expect = 3e-08 Identities = 32/106 (30%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 M+ LT++GF +V A DG G+ ++ DL+L+D+ LP ++G + LK E Sbjct: 12 MVDHYLTKEGFGIVHAFDGEEGIRLFQQGSYDLVLLDIMLPKLNGMDF---LKIIREKSN 68 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ ++A D+ + G DDY KP + L +++ + R Sbjct: 69 IPVLMISAKDGDVDKALGLGFGADDYIAKPFSMIELTARVKAAIRR 114
>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 949 Score = 57.4 bits (137), Expect = 3e-08 Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L+ +L G++ A+DG ++ + D++L D+++P MDG+ T++++ +L Sbjct: 839 LLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIR---QLGL 895 Query: 371 T-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 T PVI +TA+A+A ++++ + +G D +KP+ L + + ER Sbjct: 896 TLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 942
>TORR_ECOLI (P38684) TorCAD operon transcriptional regulatory protein torR| Length = 230 Score = 57.0 bits (136), Expect = 5e-08 Identities = 35/105 (33%), Positives = 55/105 (52%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L T++G+ V + GA + + + DLIL+D++LP +G TR L+ E Sbjct: 18 LQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALR---ERSTV 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +I +T + DR + G DDY TKP+EL L+ ++ LL R Sbjct: 75 GIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 119
>TORR_ECO57 (P58357) TorCAD operon transcriptional regulatory protein torR| Length = 230 Score = 56.6 bits (135), Expect = 6e-08 Identities = 35/105 (33%), Positives = 55/105 (52%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L T++G+ V + GA + + + DLIL+D++LP +G TR L+ E Sbjct: 18 LQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALR---ERSTV 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +I +T + DR + G DDY TKP+EL L+ ++ LL R Sbjct: 75 GIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 119
>RCAC_FREDI (Q01473) Protein rcaC| Length = 651 Score = 56.6 bits (135), Expect = 6e-08 Identities = 29/97 (29%), Positives = 55/97 (56%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 GF+V D + PD +++D+++P ++G+E + L++DP Q+ PV+ L+ Sbjct: 549 GFKVTTLADPQQFWTVLQAVTPDALVLDVNMPQINGFELCQLLRSDPHWQRLPVLFLSVL 608 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 + + +A A G DDY KP++ L ++I + L+R Sbjct: 609 TDPTTQNQAFAVGGDDYLCKPVKGVELANRILRRLQR 645 Score = 55.8 bits (133), Expect = 1e-07 Identities = 35/115 (30%), Positives = 59/115 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L++ LT + V + DG G + DLI++D+ LP +DG ++ +A Sbjct: 15 VLTKNLTTHHYIVDVVKDGEMGWTYGSTFEYDLIILDIMLPNLDGISLCKRFRAQG--YT 72 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWL 207 P++ LTA + + + + AG DDY KP + L+++I LL R S+ P L Sbjct: 73 VPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIELIARIRALLRRGSNNPFPLL 127
>CHVI_RHIME (P50350) Transcriptional regulatory protein chvI| Length = 240 Score = 56.6 bits (135), Expect = 6e-08 Identities = 34/109 (31%), Positives = 56/109 (51%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 +S L +G++V DGA+ ++ P L + D+ +P MDG E R+L+ +L Sbjct: 17 VSIALEAEGYKVETYTDGASALEGLLARPPQLAIFDIKMPRMDGMELLRRLRQKSDL--- 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHR 222 PVI LT+ D + G DD+ TKP L+ ++ +L R ++R Sbjct: 74 PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRAANR 122
>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 55.8 bits (133), Expect = 1e-07 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQQTPVI 360 L + G V +A G A ++ + + DL+L+D+ LP M G + +R+L K P P++ Sbjct: 545 LEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLV 604 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 ALTA+ + D+++ + AG DD +KP+ +P L + I Sbjct: 605 ALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639
>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 55.8 bits (133), Expect = 1e-07 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQQTPVI 360 L + G V +A G A ++ + + DL+L+D+ LP M G + +R+L K P P++ Sbjct: 545 LEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLV 604 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 ALTA+ + D+++ + AG DD +KP+ +P L + I Sbjct: 605 ALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639
>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 55.8 bits (133), Expect = 1e-07 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQQTPVI 360 L + G V +A G A ++ + + DL+L+D+ LP M G + +R+L K P P++ Sbjct: 545 LEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLV 604 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 ALTA+ + D+++ + AG DD +KP+ +P L + I Sbjct: 605 ALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639
>PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory protein phoB| Length = 231 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/106 (32%), Positives = 54/106 (50%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 M++ L++K ++V+ A D ++ + E P LIL+D LP G + + +K Sbjct: 17 MIALFLSQKYYDVIEASDFKTAINKIK-ENPKLILLDWMLPGRSGIQFIQYIKKQESYAA 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA + D + AG DDY TKP LL++I + R Sbjct: 76 IPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRR 121
>CHEB_ARCFU (O29221) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 349 Score = 55.5 bits (132), Expect = 1e-07 Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 3/104 (2%) Frame = -3 Query: 536 LTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVI 360 LT+ G EVV A +G V+ A + +PD+I +D+++P MDG A LK E Q TPV+ Sbjct: 20 LTKAGIEVVDTAKNGREAVEKALKLKPDVITLDINMPEMDGLTA---LKLIMEKQPTPVV 76 Query: 359 ALTAHAMASDRE--KAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 L++ RE +A+ G D+ TKP LS +AQ L R Sbjct: 77 MLSSLTKEGARETLEALKIGAVDFVTKPDGALVDLSSVAQELVR 120
>YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29| Length = 210 Score = 55.5 bits (132), Expect = 1e-07 Identities = 33/101 (32%), Positives = 49/101 (48%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 LT GF V + D +R++ DLI+ D+ +P M G+ QL+ + + PVI Sbjct: 21 LTEIGFHVEESTCVDQAWDILKRKKIDLIICDIIMPGMGGFNFLHQLRLNTDYCTLPVIL 80 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LT + DR GCD Y +KP + L+ I +L R Sbjct: 81 LTTRGLTQDRIIGYKTGCDSYISKPFNIEELVVIIEGVLNR 121
>CHEB_HALMA (Q5V0B3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 369 Score = 55.1 bits (131), Expect = 2e-07 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 8/112 (7%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ 375 ++S L+ G +VV A DG V +PD++ MD+ +PVM+G EAT ++ A+ Sbjct: 19 VISDILSDGGIDVVAQARDGEEAVSAVIEHRPDVVTMDVEMPVMNGIEATERIMAE---S 75 Query: 374 QTPVIALTAHA--MASDREKAIAAGCDDYDTKP-----IELPRLLSKIAQLL 240 TPV+ L+AH A +A+ G D+ TKP +E+ RL ++ +++ Sbjct: 76 PTPVLMLSAHTDENADVTFEALDKGAVDFFTKPGGEVSMEMSRLKDQLVEMV 127
>YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 249 Score = 55.1 bits (131), Expect = 2e-07 Identities = 31/106 (29%), Positives = 54/106 (50%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L RLT G+ V A +G + DLI++D+ +P +DG+ ++++ + ++ Sbjct: 26 ILQTRLTLLGYSVSTACNGEEALKIFTTHSIDLIILDVMMPKLDGYGVCQEIRKESDI-- 83 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I LTA D+ + G DDY KP L ++I +L R Sbjct: 84 -PIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>CIAR_STRR6 (P0A4H8) Transcriptional regulatory protein ciaR| Length = 224 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/95 (34%), Positives = 49/95 (51%) Frame = -3 Query: 518 EVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAM 339 +V+ DG G+ A DLIL+D+ LP +G++ ++L+ TPV+ +TA Sbjct: 26 DVMQVFDGEEGLYEAESGVYDLILLDLMLPEKNGFQVLKELREKGIT--TPVLIMTAKES 83 Query: 338 ASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 D+ G DDY TKP L L +I LL+R Sbjct: 84 LDDKGHGFELGADDYLTKPFYLEELKMRIQALLKR 118
>CIAR_STRPN (P0A4H7) Transcriptional regulatory protein ciaR| Length = 224 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/95 (34%), Positives = 49/95 (51%) Frame = -3 Query: 518 EVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAM 339 +V+ DG G+ A DLIL+D+ LP +G++ ++L+ TPV+ +TA Sbjct: 26 DVMQVFDGEEGLYEAESGVYDLILLDLMLPEKNGFQVLKELREKGIT--TPVLIMTAKES 83 Query: 338 ASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 D+ G DDY TKP L L +I LL+R Sbjct: 84 LDDKGHGFELGADDYLTKPFYLEELKMRIQALLKR 118
>GTCR_ANEMI (Q44929) Response regulator gtcR| Length = 242 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/113 (28%), Positives = 59/113 (52%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L L R+ + ++ A+DG + R+ DL ++D+ +P +DG++ ++L + +L Sbjct: 17 LLKLFLERESYRIIEAYDGEQAWNYIRQHPVDLAIIDIMMPALDGFQLIKRLTNEYKL-- 74 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI L+A SD+ + G DD+ +KP +++I L R EP Sbjct: 75 -PVIILSAKNRDSDKILGLGLGADDFISKPFNPLEAVARIQAQLRRAFEFNEP 126
>SPHR_SYNP7 (P39663) Alkaline phosphatase synthesis transcriptional regulatory| protein sphR Length = 257 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 9/115 (7%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARR---------EQPDLILMDMSLPVMDGWEATRQ 399 M++ L ++GF V +A DG ++ R E PDL+++D+ LP ++G + R Sbjct: 38 MVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDLMLPAVNGLDFCRL 97 Query: 398 LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 L+ P++ L+A +DR + G DDY TKP L+++ LL R Sbjct: 98 LRRQGVT--VPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARCRALLRR 150
>SP0A_CLODI (P52938) Stage 0 sporulation protein A homolog| Length = 274 Score = 53.9 bits (128), Expect = 4e-07 Identities = 35/130 (26%), Positives = 60/130 (46%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 +A DG +D ++ QPDL+++D+ +P +DG +L + +I L+A Sbjct: 39 IAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKI 98 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQFLLFGV 150 + AI G D Y KP + +++I +L+ + EP P P ++ R + V Sbjct: 99 TQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQVEP--KPRPVQETQMTRSDFVKNV 156 Query: 149 GTTFTAIAAI 120 G T I I Sbjct: 157 GNIETEITNI 166
>DCTR_BACME (P39486) Probable C4-dicarboxylate response regulator dctR| Length = 228 Score = 53.9 bits (128), Expect = 4e-07 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Frame = -3 Query: 527 KGFEVVLA-HDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALT 351 +GF V+ A +G GV ++ QPDL ++DM +P DG +Q++A+ +T VIA+T Sbjct: 29 EGFTVIAAASNGLEGVQLIKQHQPDLTIIDMYMPSQDGLTTLQQIRANG--YKTDVIAVT 86 Query: 350 AHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 246 A + K + G DY KP + R+ + Q Sbjct: 87 AASDIETVRKVLQYGAVDYIMKPFKFERMKQALEQ 121
>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)| Length = 777 Score = 53.5 bits (127), Expect = 5e-07 Identities = 28/80 (35%), Positives = 42/80 (52%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G V A DG + DLIL D+ +P +DG+ R+LK+ P + + PVI L++ Sbjct: 682 GHSVEEAQDGEEAYVKVQNNTYDLILTDVQMPKLDGFSLARRLKSTPAVARIPVIILSSL 741 Query: 344 AMASDREKAIAAGCDDYDTK 285 A D+ + + AG D Y K Sbjct: 742 ASPEDKRRGLDAGADAYLVK 761
>REGX3_MYCLE (P54884) Sensory transduction protein regX3| Length = 198 Score = 53.5 bits (127), Expect = 5e-07 Identities = 30/89 (33%), Positives = 46/89 (51%) Frame = -3 Query: 500 DGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREK 321 DG A + R D++L+D+ LP M G + +QL+ + PVI +TA D+ Sbjct: 4 DGPAALAEFDRSGADIVLLDLMLPGMSGTDVYKQLRVRSSV---PVIMVTARDSEIDKVV 60 Query: 320 AIAAGCDDYDTKPIELPRLLSKIAQLLER 234 + G DDY TKP L+++I +L R Sbjct: 61 GLELGADDYVTKPYSARELIARIRAVLRR 89
>QSEB_SALTY (P66795) Transcriptional regulatory protein qseB| Length = 219 Score = 53.5 bits (127), Expect = 5e-07 Identities = 30/101 (29%), Positives = 53/101 (52%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L++ GF V +G G + D +++D++LP MDG + R+ + + Q PV+ Sbjct: 20 LSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGK--QEPVLI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA ++R + + G DDY KP L + +++ L+ R Sbjct: 78 LTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRR 118
>QSEB_SALTI (P66796) Transcriptional regulatory protein qseB| Length = 219 Score = 53.5 bits (127), Expect = 5e-07 Identities = 30/101 (29%), Positives = 53/101 (52%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L++ GF V +G G + D +++D++LP MDG + R+ + + Q PV+ Sbjct: 20 LSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGK--QEPVLI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA ++R + + G DDY KP L + +++ L+ R Sbjct: 78 LTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRR 118
>SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1| Length = 712 Score = 53.1 bits (126), Expect = 7e-07 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 26/114 (22%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLK--------------------- 393 LA +G V+ + LI MD+ LPV+ G EA +Q++ Sbjct: 532 LAKNGQEAVNIWKEGGLHLIFMDLQLPVLSGIEAAKQIRDFEKQNGIGIQKSLNNSHSNL 591 Query: 392 ---ADPELQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 246 Q PVI ALTA D+ KA+ +GC+DY TKP+ L L KI + Sbjct: 592 EKGTSKRFSQAPVIIVALTASNSQMDKRKALLSGCNDYLTKPVNLHWLSKKITE 645
>PHOP_SHIFL (Q83RR0) Virulence transcriptional regulatory protein phoP| Length = 223 Score = 53.1 bits (126), Expect = 7e-07 Identities = 39/171 (22%), Positives = 73/171 (42%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G +V A D PD+ ++D+ LP DG R+ +++ P++ LTA Sbjct: 24 GHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSNDV--SLPILVLTAR 81 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQF 165 D+ + ++AG DDY TKP + +++++ L+ R S + P RR+ Sbjct: 82 ESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRREL 141 Query: 164 LLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 + TA + +I N S + L + +++ T+D+ Sbjct: 142 SINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 192
>PHOP_ECOL6 (Q8CXZ9) Transcriptional regulatory protein phoP| Length = 223 Score = 53.1 bits (126), Expect = 7e-07 Identities = 39/171 (22%), Positives = 73/171 (42%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G +V A D PD+ ++D+ LP DG R+ +++ P++ LTA Sbjct: 24 GHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSNDV--SLPILVLTAR 81 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQF 165 D+ + ++AG DDY TKP + +++++ L+ R S + P RR+ Sbjct: 82 ESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRREL 141 Query: 164 LLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 + TA + +I N S + L + +++ T+D+ Sbjct: 142 SINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 192
>PILG_PSEAE (P46384) Protein pilG| Length = 135 Score = 53.1 bits (126), Expect = 7e-07 Identities = 29/95 (30%), Positives = 47/95 (49%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L + G +V+ A DG + P++I +D+ +P +DG++ +K + + TPVI Sbjct: 27 LKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIM 86 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 L++ D+ K G D Y TKP LL I Sbjct: 87 LSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAI 121
>QSEB_ECOLI (P52076) Transcriptional regulatory protein qseB| Length = 219 Score = 53.1 bits (126), Expect = 7e-07 Identities = 30/101 (29%), Positives = 52/101 (51%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L++ GF V G G + D +++D++LP MDG + R+ + Q+ PV+ Sbjct: 20 LSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKG--QREPVLI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA ++R + + G DDY KP L + +++ L+ R Sbjct: 78 LTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRR 118
>ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR| Length = 443 Score = 52.8 bits (125), Expect = 8e-07 Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVIALTA 348 G+ V LA++G ++ R + DL+L D+ + MDG E +++K +P + PV+ +TA Sbjct: 29 GYRVALANNGLQALEKVREKVFDLVLCDIRMAEMDGIETLKEIKTFNPSI---PVLIMTA 85 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 ++ +A+ +G DY KP++ +L +++ L Sbjct: 86 YSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEAL 121
>PHOP_ECOLI (P23836) Transcriptional regulatory protein phoP| Length = 223 Score = 52.8 bits (125), Expect = 8e-07 Identities = 35/150 (23%), Positives = 68/150 (45%) Frame = -3 Query: 461 PDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKP 282 PD+ ++D+ LP DG R+ +++ P++ LTA D+ + ++AG DDY TKP Sbjct: 45 PDIAIVDLGLPDEDGLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKP 102 Query: 281 IELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQFLLFGVGTTFTAIAAISLSDVI 102 + +++++ L+ R S + P RR+ + TA + +I Sbjct: 103 FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLI 162 Query: 101 TNTRLSESSREEVQSLLQEFDIKLIETVDL 12 N S + L + +++ T+D+ Sbjct: 163 RNNGKVVSKDSLMLQLYPDAELRESHTIDV 192
>QSEB_ECO57 (Q8XBS3) Transcriptional regulatory protein qseB| Length = 219 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/101 (29%), Positives = 51/101 (50%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L++ GF V G G + D +++D++LP MDG + R+ + Q+ PV+ Sbjct: 20 LSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKG--QREPVLI 77 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA +R + + G DDY KP L + +++ L+ R Sbjct: 78 LTARDALEERVEGLRLGADDYLCKPFALIEVAARLEALMRR 118
>PETR_RHOCA (P31079) Protein petR| Length = 245 Score = 52.4 bits (124), Expect = 1e-06 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAG--VDTARREQPDLILMDMSLPVMDGWEATRQLKADPEL 378 +L + L R GF V D A + T + +LI++D+ +P DG TR L+ Sbjct: 21 LLQKFLIRNGFLVTAGRDAAHARRLFTLSGLEFNLIVLDVMMPGEDGLSLTRDLRTK--- 77 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDY--DTKPIELPRLLSKIAQLLER 234 TP++ LTA +R + + AG DDY KP E LL +I +L R Sbjct: 78 MATPILLLTARGETRERIEGLEAGADDYLFTPKPFEPKELLLRINAILRR 127
>PHOP_SALTY (P14146) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/179 (22%), Positives = 75/179 (41%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L +L G +V A D PD+ ++D+ LP DG R+ ++ Sbjct: 17 LKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSSDV--SL 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PST 189 PV+ LTA D+ + +++G DDY TKP + +++++ L+ R S + P Sbjct: 75 PVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRRNSGLASQVINIPPFQ 134 Query: 188 AMKLRRQFLLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 RR+ + TA + +I N S + L + +++ T+D+ Sbjct: 135 VDLSRRELSVNEEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 193
>PHOP_SALTI (Q8Z7H2) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/179 (22%), Positives = 75/179 (41%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L +L G +V A D PD+ ++D+ LP DG R+ ++ Sbjct: 17 LKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSSDV--SL 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PST 189 PV+ LTA D+ + +++G DDY TKP + +++++ L+ R S + P Sbjct: 75 PVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRRNSGLASQVINISPFQ 134 Query: 188 AMKLRRQFLLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 RR+ + TA + +I N S + L + +++ T+D+ Sbjct: 135 VDLSRRELSVNEEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 193
>PHOP_SALPA (Q5PMJ1) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/179 (22%), Positives = 75/179 (41%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L +L G +V A D PD+ ++D+ LP DG R+ ++ Sbjct: 17 LKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSSDV--SL 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PST 189 PV+ LTA D+ + +++G DDY TKP + +++++ L+ R S + P Sbjct: 75 PVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRRNSGLASQVINIPPFQ 134 Query: 188 AMKLRRQFLLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 RR+ + TA + +I N S + L + +++ T+D+ Sbjct: 135 VDLSRRELSVNEEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 193
>OMPR_SHIFL (P0AA21) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>OMPR_SALTY (P0AA19) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>OMPR_SALTI (P0AA20) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>OMPR_ECOLI (P0AA16) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>OMPR_ECOL6 (P0AA17) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>OMPR_ECO57 (P0AA18) Transcriptional regulatory protein ompR| Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT +GF+V + RE L+++D+ LP DG R+L++ + Sbjct: 19 LLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS--QSNP 76 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I +TA DR + G DDY KP LL++I +L R Sbjct: 77 MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>LUXO_VIBVY (Q7MM78) Regulatory protein luxO| Length = 453 Score = 52.0 bits (123), Expect = 1e-06 Identities = 28/87 (32%), Positives = 43/87 (49%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G ++ + G +D+ + PDLIL+D+ LP M G + +KA P+I +TAH Sbjct: 20 GIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASH--PDVPIIFMTAH 77 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRL 264 +A+ G D+ KP E RL Sbjct: 78 GSIDTAVEAMRHGSQDFLIKPCEADRL 104
>LUXO_VIBVU (Q8CWJ5) Regulatory protein luxO| Length = 453 Score = 52.0 bits (123), Expect = 1e-06 Identities = 28/87 (32%), Positives = 43/87 (49%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G ++ + G +D+ + PDLIL+D+ LP M G + +KA P+I +TAH Sbjct: 20 GIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASH--PDVPIIFMTAH 77 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRL 264 +A+ G D+ KP E RL Sbjct: 78 GSIDTAVEAMRHGSQDFLIKPCEADRL 104
>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein| POS9) Length = 622 Score = 51.6 bits (122), Expect = 2e-06 Identities = 35/117 (29%), Positives = 59/117 (50%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 + S+ L + G V + DG + + T + + DL+LMD+ +P +DG AT +++ + Sbjct: 391 LCSKFLRKYGCTVQVVSDGLSAISTLEKYRYDLVLMDIVMPNLDGATATSIVRSFD--NE 448 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP 201 TP+IA+T + M D + G +D KP L S + + L+ E LPP Sbjct: 449 TPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSILIRYLKDRIPLCEQQLPP 505
>CUTR_STRLI (P0A4I2) Transcriptional regulatory protein cutR (Defective melC1| suppressor protein) Length = 217 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPEL-QQTPVI 360 L R+ V + +DGAA ++ D++++D LP++ G + R++ EL T V+ Sbjct: 20 LRREAMAVDVVYDGAAALERIGVNDYDVVVLDRDLPLVHGDDVCRKIV---ELGMPTRVL 76 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA SDR + + G DDY KP L++++ L R Sbjct: 77 MLTASGDVSDRVEGLEIGADDYLPKPFAFSELIARVRALGRR 118
>CUTR_STRCO (P0A4I1) Transcriptional regulatory protein cutR (Defective melC1| suppressor protein) Length = 217 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPEL-QQTPVI 360 L R+ V + +DGAA ++ D++++D LP++ G + R++ EL T V+ Sbjct: 20 LRREAMAVDVVYDGAAALERIGVNDYDVVVLDRDLPLVHGDDVCRKIV---ELGMPTRVL 76 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 LTA SDR + + G DDY KP L++++ L R Sbjct: 77 MLTASGDVSDRVEGLEIGADDYLPKPFAFSELIARVRALGRR 118
>LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 51.6 bits (122), Expect = 2e-06 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = -3 Query: 500 DGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREK 321 DG ++ + DLILMD LP M G EATR+++ +L TP+ A TA A S +++ Sbjct: 765 DGTQALEKLKEHAFDLILMDNQLPKMGGIEATREIRETLKL-GTPIYACTADAQESTKQE 823 Query: 320 AIAAGCDDYDTKPIE 276 ++AG + KPI+ Sbjct: 824 FLSAGANRVIVKPIK 838
>LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 51.6 bits (122), Expect = 2e-06 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = -3 Query: 500 DGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREK 321 DG ++ + DLILMD LP M G EATR+++ +L TP+ A TA A S +++ Sbjct: 765 DGTQALEKLKEHAFDLILMDNQLPKMGGIEATREIRETLKL-GTPIYACTADAQESTKQE 823 Query: 320 AIAAGCDDYDTKPIE 276 ++AG + KPI+ Sbjct: 824 FLSAGANRVIVKPIK 838
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 6/102 (5%) Frame = -3 Query: 551 MLSRRLTRKGFE-VVLAHDGAAGVD-----TARREQPDLILMDMSLPVMDGWEATRQLKA 390 ++ R L +G E + LA DG D T++ E ++I MD+ +P +DG +T+ ++ Sbjct: 1102 VIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRR 1161 Query: 389 DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 264 D +P++ALTA A S+ ++ + +G + + +KPI+ P+L Sbjct: 1162 DLGYT-SPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKL 1202
>NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein| Length = 469 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/113 (26%), Positives = 52/113 (46%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R LT G G +D + PD++L D+ +P MDG +Q+K + Sbjct: 18 VLERALTGAGLSCTTFESGNEVLDALTTKTPDVLLSDIRMPGMDGLALLKQIKQRHPM-- 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI +TAH+ A G DY KP ++ ++ + + + +++P Sbjct: 76 LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAISHYQEQQQP 128
>ZRAR_SALTY (P25852) Transcriptional regulatory protein zraR| Length = 441 Score = 51.2 bits (121), Expect = 2e-06 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVIALTA 348 G+ V LA+ G + R + DL+L D+ + MDG +++KA +P + P++ +TA Sbjct: 29 GYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMDGIATLKEIKALNPAI---PILIMTA 85 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 + +A+ AG DY KP++ RL + + L +H RE Sbjct: 86 FSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL---AHTRE 126
>ZRAR_SALTI (Q8Z333) Transcriptional regulatory protein zraR| Length = 441 Score = 51.2 bits (121), Expect = 2e-06 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVIALTA 348 G+ V LA+ G + R + DL+L D+ + MDG +++KA +P + P++ +TA Sbjct: 29 GYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMDGIATLKEIKALNPAI---PILIMTA 85 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 + +A+ AG DY KP++ RL + + L +H RE Sbjct: 86 FSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL---AHTRE 126
>SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F (EC 2.7.-.-)| (Stage 0 sporulation protein F) Length = 124 Score = 50.8 bits (120), Expect = 3e-06 Identities = 27/104 (25%), Positives = 54/104 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L+ ++G++ A +G +D +E+PDL+L+DM +P MDG E +++K E Sbjct: 18 LLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDE--N 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 VI +TA+ +++ G + KP ++ + + + L Sbjct: 76 IRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL 119
>VANR_ENTFA (Q47744) Regulatory protein vanRB| Length = 220 Score = 50.8 bits (120), Expect = 3e-06 Identities = 31/101 (30%), Positives = 51/101 (50%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 L +EV DG L+++D+ LP M+G E R+ +A + TP++ Sbjct: 22 LAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHELLREFRAQND---TPILM 78 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +TA + ++ +A A DDY TKP ++ LL ++ LL R Sbjct: 79 MTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR 119
>NTRC_ECOLI (P0AFB8) Nitrogen regulation protein NR(I)| Length = 469 Score = 50.4 bits (119), Expect = 4e-06 Identities = 29/113 (25%), Positives = 53/113 (46%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R L G +GA ++ + PD++L D+ +P MDG +Q+K + Sbjct: 18 VLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPM-- 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI +TAH+ A G DY KP ++ ++ + + + +++P Sbjct: 76 LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQP 128
>NTRC_ECO57 (P0AFB9) Nitrogen regulation protein NR(I)| Length = 469 Score = 50.4 bits (119), Expect = 4e-06 Identities = 29/113 (25%), Positives = 53/113 (46%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R L G +GA ++ + PD++L D+ +P MDG +Q+K + Sbjct: 18 VLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPM-- 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI +TAH+ A G DY KP ++ ++ + + + +++P Sbjct: 76 LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQP 128
>CHEB_NATPD (Q3IRR4) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 355 Score = 50.4 bits (119), Expect = 4e-06 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ 375 ++S L G VV A +G +GV+ R +PD++ MD+ +P MDG EAT ++ + Sbjct: 20 VISDMLDDAGITVVATASNGESGVEAVRTHEPDVVTMDLKMPGMDGIEATGRIMDE---C 76 Query: 374 QTPVIALTAHA--MASDREKAIAAGCDDYDTKP 282 TPV+ L+AHA A +A+ G D+ KP Sbjct: 77 PTPVLVLSAHADDGAELTFEAMDEGAVDFFKKP 109
>PHOP_SALCH (Q57QC3) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 50.4 bits (119), Expect = 4e-06 Identities = 40/179 (22%), Positives = 74/179 (41%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 L +L G +V D PD+ ++D+ LP DG R+ ++ Sbjct: 17 LKVQLQDSGHQVDATEDAREADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSSDI--SL 74 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PST 189 PV+ LTA D+ + +++G DDY TKP + +++++ L+ R S + P Sbjct: 75 PVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRRNSGLASQVINIPPFQ 134 Query: 188 AMKLRRQFLLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 RR+ + TA + +I N S + L + +++ T+D+ Sbjct: 135 VDLSRRELSVNEEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 193
>ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR| Length = 441 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVIALTA 348 G+ V LA+ G ++ R + DL+L D+ + MDG +++KA +P + PV+ +TA Sbjct: 29 GYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAI---PVLIMTA 85 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 ++ +A+ G DY KP++ L + + + L Sbjct: 86 YSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>CHEB_RHILO (Q98PD1) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 339 Score = 50.1 bits (118), Expect = 6e-06 Identities = 22/41 (53%), Positives = 32/41 (78%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 +A +G V+ RR+ PDLILMD+++PVMDG EATR++ A+ Sbjct: 31 IATNGREAVEVCRRDLPDLILMDLAMPVMDGVEATRRIMAE 71
>CPXR_HAEIN (P44895) Transcriptional regulatory protein cpxR homolog| Length = 227 Score = 50.1 bits (118), Expect = 6e-06 Identities = 31/106 (29%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +LS L +GF+V A++G + E L+L+D+ +P ++G E ++++ ++ Sbjct: 16 LLSTLLELEGFDVETANNGLEALQKLN-ESYKLVLLDVMMPKLNGIETLKEIR---KVSN 71 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 PV+ LTA DR + G DD KP L+++I +L R Sbjct: 72 VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRR 117
>PHOP_ECO57 (Q8X738) Transcriptional regulatory protein phoP| Length = 223 Score = 50.1 bits (118), Expect = 6e-06 Identities = 38/171 (22%), Positives = 72/171 (42%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G +V A D PD+ ++D+ LP DG + +++ P++ LTA Sbjct: 24 GHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLSLICRWRSNDV--SLPILVLTAR 81 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQF 165 D+ + ++AG DDY TKP + +++++ L+ R S + P RR+ Sbjct: 82 ESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRREL 141 Query: 164 LLFGVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETVDL 12 + TA + +I N S + L + +++ T+D+ Sbjct: 142 SINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDV 192
>LUXO_VIBPA (Q87MX7) Regulatory protein luxO| Length = 453 Score = 50.1 bits (118), Expect = 6e-06 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQQTPVI 360 LT G ++ + G +++ PDLIL+D+ LP M G + + K+ P++ P+I Sbjct: 16 LTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSHPDV---PII 72 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRL 264 +TAH +A+ G D+ KP E RL Sbjct: 73 FMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104
>LUXO_VIBHA (P54299) Luminescence regulatory protein luxO| Length = 453 Score = 50.1 bits (118), Expect = 6e-06 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL-KADPELQQTPVI 360 LT G ++ + G +++ PDLIL+D+ LP M G + + K+ P++ P+I Sbjct: 16 LTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSHPDV---PII 72 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRL 264 +TAH +A+ G D+ KP E RL Sbjct: 73 FMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104
>BAER_ECOLI (P69228) Transcriptional regulatory protein baeR| Length = 240 Score = 50.1 bits (118), Expect = 6e-06 Identities = 27/86 (31%), Positives = 46/86 (53%) Frame = -3 Query: 473 RREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDY 294 R+ PDLIL+D+ LP DG R+++ ++ P++ +TA DR + G DDY Sbjct: 51 RQTPPDLILLDLMLPGTDGLTLCREIRRFSDI---PIVMVTAKIEEIDRLLGLEIGADDY 107 Query: 293 DTKPIELPRLLSKIAQLLER*SHRRE 216 KP +++++ +L R +RE Sbjct: 108 ICKPYSPREVVARVKTILRRCKPQRE 133
>BAER_ECOL6 (P69229) Transcriptional regulatory protein baeR| Length = 240 Score = 50.1 bits (118), Expect = 6e-06 Identities = 27/86 (31%), Positives = 46/86 (53%) Frame = -3 Query: 473 RREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDY 294 R+ PDLIL+D+ LP DG R+++ ++ P++ +TA DR + G DDY Sbjct: 51 RQTPPDLILLDLMLPGTDGLTLCREIRRFSDI---PIVMVTAKIEEIDRLLGLEIGADDY 107 Query: 293 DTKPIELPRLLSKIAQLLER*SHRRE 216 KP +++++ +L R +RE Sbjct: 108 ICKPYSPREVVARVKTILRRCKPQRE 133
>NTRC_PROVU (P28787) Nitrogen regulation protein NR(I)| Length = 473 Score = 49.7 bits (117), Expect = 7e-06 Identities = 31/113 (27%), Positives = 52/113 (46%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R +TR+G + EQPD++L D+ +P MDG + +K + Sbjct: 18 VLERAITREGMLCRAFEHANDVLKALNSEQPDVLLSDIRMPDMDGLSLLKIIKE--QYPT 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI +TAH+ A G DY KP ++ L+ I + + +++P Sbjct: 76 LPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLALIERAITHYREQKQP 128
>ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR| Length = 441 Score = 49.7 bits (117), Expect = 7e-06 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPELQQTPVIALTA 348 G+ V LA+ G ++ R DL+L D+ + MDG +++KA +P + PV+ +TA Sbjct: 29 GYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIATLKEIKALNPAI---PVLIMTA 85 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 ++ +A+ G DY KP++ L + + + L Sbjct: 86 YSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121
>SP0A_BACAN (P52928) Stage 0 sporulation protein A| Length = 264 Score = 49.7 bits (117), Expect = 7e-06 Identities = 25/88 (28%), Positives = 48/88 (54%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A++G ++ + +QPD++++D+ +P +DG +++ L+Q VI LTA Sbjct: 35 AYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQPSVIMLTAFGQEDVT 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQL 243 +KA+ G + KP ++ L S I Q+ Sbjct: 95 KKAVDLGASYFILKPFDMENLTSHIRQV 122
>LUXO1_VIBCH (Q9KT84) Regulatory protein luxO| Length = 455 Score = 49.7 bits (117), Expect = 7e-06 Identities = 27/91 (29%), Positives = 45/91 (49%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 LT ++ + G +++ R +PDLIL+D+ LP M G + +K + P++ Sbjct: 16 LTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVK--EKSPDVPIVF 73 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRL 264 +TAH +A+ G D+ KP E RL Sbjct: 74 MTAHGSIDTAVEAMRHGAQDFLIKPCEADRL 104
>CHEB_DESPS (Q6AJV3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 364 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Frame = -3 Query: 524 GFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA 348 G EV+ +AH+G +D R +PDLI +D+ +PVM+G E LK P+ +++ Sbjct: 28 GIEVIGVAHNGKIALDKIRLSKPDLITLDIEMPVMNGIELLEHLKDIPDAPGAVMLSTLT 87 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIA 249 + KA+ G D+ KP E +K A Sbjct: 88 SDGSRMTMKALELGAFDFILKPQEKTPAANKAA 120
>CHEY_THEMA (Q56312) Chemotaxis protein cheY| Length = 120 Score = 49.3 bits (116), Expect = 9e-06 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Frame = -3 Query: 551 MLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQ-LKADPEL 378 ML +T+ G+EV A +G V+ + +PD++ MD+++P M+G +A ++ +K DP Sbjct: 17 MLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNA 76 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 + A+ AM + AI AG D+ KP + R++ + Sbjct: 77 KIIVCSAMGQQAMVIE---AIKAGAKDFIVKPFQPSRVVEAL 115
>CHEY_TREPA (P96126) Chemotaxis protein cheY| Length = 144 Score = 49.3 bits (116), Expect = 9e-06 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%) Frame = -3 Query: 536 LTRKGFEVV-LAHDGAAGVDTARREQP--DLILMDMSLPVMDGWEATRQ-LKADPELQQT 369 LT +G+EV A DG GV+ + P DL+ MD+++P MDG A + L+ D + Sbjct: 44 LTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMDGITALEKILEFD---KNA 100 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 237 V+ ++A +KA+ G +Y KP++ ++L +IA +L+ Sbjct: 101 KVVIISALGKEELVKKALLLGAKNYIVKPLDRKKVLERIASVLK 144
>VRAR_STAES (Q8CNP9) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T++ EVV +GA+G D A +PDLILMD+ + MDG EAT ++K D L Q V Sbjct: 24 TQEDIEVV--GEGASGKDAITKAHELKPDLILMDLLMDDMDGVEATTEIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ +G D Y K Sbjct: 80 VMLTSFIEDKEVYRALDSGVDSYILK 105
>VRAR_STAEQ (Q5HN50) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T++ EVV +GA+G D A +PDLILMD+ + MDG EAT ++K D L Q V Sbjct: 24 TQEDIEVV--GEGASGKDAITKAHELKPDLILMDLLMDDMDGVEATTEIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ +G D Y K Sbjct: 80 VMLTSFIEDKEVYRALDSGVDSYILK 105
>VRAR_STAAW (Q7A0I0) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAU (P0C0Z1) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAS (Q6G850) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAR (Q6GFH3) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAN (Q7A4R9) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAM (Q7A2Q1) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>VRAR_STAAC (Q5HEP0) Response regulator protein vraR| Length = 209 Score = 49.3 bits (116), Expect = 9e-06 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 533 TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPV 363 T+ EVV +GA+G + A +PDLILMD+ + MDG EAT Q+K D L Q V Sbjct: 24 TQSDIEVV--GEGASGKEAIAKAHELKPDLILMDLLMDDMDGVEATTQIKKD--LPQIKV 79 Query: 362 IALTAHAMASDREKAIAAGCDDYDTK 285 + LT+ + +A+ AG D Y K Sbjct: 80 LMLTSFIEDKEVYRALDAGVDSYILK 105
>CHEY_PSEAE (Q51455) Chemotaxis protein cheY| Length = 124 Score = 49.3 bits (116), Expect = 9e-06 Identities = 28/91 (30%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG + D ++ D ++P M G + R ++AD L+ PV+ +TA A Sbjct: 31 ADDGTTALPMLHSGNFDFLVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQI 90 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +A AG + Y KP L KI ++ ER Sbjct: 91 IEAAQAGVNGYVVKPFTAQVLKEKIEKIFER 121
>CHEY_YEREN (Q93P00) Chemotaxis protein cheY| Length = 128 Score = 48.9 bits (115), Expect = 1e-05 Identities = 27/91 (29%), Positives = 44/91 (48%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ R D ++ D ++P MDG + + ++AD L PV+ +TA A + Sbjct: 35 AEDGVDALNKLRTGGFDFVVSDWNMPNMDGLDLLKTIRADGALGTLPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>SP0A_BACTU (P0A4I4) Stage 0 sporulation protein A| Length = 264 Score = 48.5 bits (114), Expect = 2e-05 Identities = 25/88 (28%), Positives = 47/88 (53%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A++G ++ +QPD++++D+ +P +DG +++ L+Q VI LTA Sbjct: 35 AYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQPSVIMLTAFGQEDVT 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQL 243 +KA+ G + KP ++ L S I Q+ Sbjct: 95 KKAVDLGASYFILKPFDMENLTSHIRQV 122
>SP0A_BACCR (P0A4I3) Stage 0 sporulation protein A| Length = 264 Score = 48.5 bits (114), Expect = 2e-05 Identities = 25/88 (28%), Positives = 47/88 (53%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A++G ++ +QPD++++D+ +P +DG +++ L+Q VI LTA Sbjct: 35 AYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQPSVIMLTAFGQEDVT 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQL 243 +KA+ G + KP ++ L S I Q+ Sbjct: 95 KKAVDLGASYFILKPFDMENLTSHIRQV 122
>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC| 2.7.13.3) (Mcs4-associated kinase 2) (His-Asp phosphorelay kinase phk1) Length = 2310 Score = 48.1 bits (113), Expect = 2e-05 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 9/115 (7%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQ---PDLILMDMSLPVMDGWEATRQLKADPE 381 +L+++L+ GF+V A DG V +Q +I D +P+ DG EA ++A Sbjct: 2193 LLTKQLSNLGFQVHAAVDGVELVKMYEAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYER 2252 Query: 380 LQQT----PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ--LLER 234 PVIALTA S +++ + G + Y TKP +L++ + + LLE+ Sbjct: 2253 ENNCSTPIPVIALTADIQKSAKQRCLEVGMNFYLTKPFTQKQLVNAVREFVLLEK 2307
>RPFG_XANC8 (Q4UU85) Response regulator rpfG| Length = 378 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/74 (35%), Positives = 41/74 (55%) Frame = -3 Query: 458 DLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPI 279 DL+L+D +P MDG E R+L+ P + P+I +T R+ A+ AG D+ KPI Sbjct: 75 DLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDFLVKPI 134 Query: 278 ELPRLLSKIAQLLE 237 L ++ + LL+ Sbjct: 135 RPRELRARCSNLLQ 148
>CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY| Length = 128 Score = 47.8 bits (112), Expect = 3e-05 Identities = 26/91 (28%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ R D ++ D ++P MDG + + ++ D L PV+ +TA A + Sbjct: 35 AEDGVDALNKLRAGGFDFVVSDWNMPNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEB_VIBF1 (Q5E3S1) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 376 Score = 47.8 bits (112), Expect = 3e-05 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQ-LKADPELQQTPVIALTA--HAM 339 +A +G V+ A+ +PD+I MD+ +PVMDG A R+ +KA P TP + ++ H Sbjct: 33 VAVNGKEAVEKAKSLKPDVITMDIEMPVMDGISAVREIMKACP----TPTLMFSSLTHDG 88 Query: 338 ASDREKAIAAGCDDYDTKPIE---------LPRLLSKIAQLLER*SHRREPWLPP*PSTA 186 A A+ AG D+ K E + L +IA++ + S R P L ++ Sbjct: 89 AKATLDALDAGALDFLPKKFEDIARNRDEAVSLLQKRIAEIARKKSFMRRPVLSSQSTST 148 Query: 185 MKLRRQFLLFGVGTTFTAIAAISLSDV 105 ++ R TT TA +A++ S V Sbjct: 149 VESR-------TATTRTATSALTASPV 168
>CHVI_RHISN (P50351) Transcriptional regulatory protein chvI| Length = 238 Score = 47.8 bits (112), Expect = 3e-05 Identities = 34/110 (30%), Positives = 54/110 (49%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 +S L +G++V D +A ++ P L + D+ +P MDG E R+L+ +L Sbjct: 17 VSIALEAEGYKVETYTDRSA-LEGLLARPPHLAIFDIKMPRMDGMELLRRLRQKSDL--- 72 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRR 219 PVI LT+ D + G DD+ TKP L+ ++ +L R S R Sbjct: 73 PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRASGPR 122
>VRAR_STAS1 (Q49YS9) Response regulator protein vraR| Length = 209 Score = 47.8 bits (112), Expect = 3e-05 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = -3 Query: 497 GAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKA 318 G ++ A +PDLILMD+ + MDG EAT Q+K D L V+ LT++ ++ +A Sbjct: 37 GKDAIEKAHELKPDLILMDLLMDDMDGVEATEQVKKD--LPNIKVVMLTSYIEDNEVYRA 94 Query: 317 IAAGCDDYDTK 285 + +G D Y K Sbjct: 95 LDSGVDSYILK 105
>PMRA_PECCC (Q70FH0) Transcriptional regulatory protein pmrA| Length = 222 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%) Frame = -3 Query: 539 RLTRKGFEVVLAHDGAAGVDTARREQPD---------LILMDMSLPVMDGWEATRQLKAD 387 +L ++G + L+H+G A ++ D L+++D+ LP DG + + + Sbjct: 10 KLLQEGLLLALSHEGYACDCAGTAKEADALIGSAHYSLVILDLGLPDDDGLALLSRWRKN 69 Query: 386 PELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 Q PV+ LTA DR + G DDY KP L L +++ L+ R Sbjct: 70 N--YQHPVLILTARDKVDDRVSGLDVGADDYLAKPFALTELQARVRALIRR 118
>BASR_SALTY (P36556) Transcriptional regulatory protein basR/pmrA| Length = 222 Score = 47.8 bits (112), Expect = 3e-05 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%) Frame = -3 Query: 488 GVDTARREQPDL-------ILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 GV TAR + L +++D+ LP DG +++ + PV+ LTAH +D Sbjct: 29 GVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLTRIRQ--KKYTLPVLILTAHDTLND 86 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 216 R + G DDY KP L L ++I LL R +++ E Sbjct: 87 RITGLDVGADDYLVKPFALEELHARIRALLRRHNNQGE 124
>CCDB_BACSU (P45709) Protein ccdB| Length = 120 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQ-LKADPELQQTPVIALTAHAMASD 330 A DG D ++ +PDL+ MD+++PV +G +A R L DP+ + VI TA Sbjct: 32 AADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAK---VIMCTAMRQQRI 88 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 +AI G D+ KP E ++L +++++ Sbjct: 89 VTEAIELGAKDFIVKPFEETKVLEAVSRVM 118
>BCER_BACHD (Q9K621) Sensory transduction protein bceR| Length = 231 Score = 47.4 bits (111), Expect = 4e-05 Identities = 26/105 (24%), Positives = 53/105 (50%) Frame = -3 Query: 548 LSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQT 369 + RL++ ++V + ++ +PDL+++D+ LP DG+ R ++ + Sbjct: 17 IKERLSQWSYDVFGVSNFEKVIEEFTSLKPDLVIIDIQLPKFDGFHWCRMIR---QHSNV 73 Query: 368 PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 P+I L++ +D ++ G DD+ KP L++KI +L R Sbjct: 74 PIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILRR 118
>VRAR_STAHJ (Q4L7J5) Response regulator protein vraR| Length = 209 Score = 47.4 bits (111), Expect = 4e-05 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Frame = -3 Query: 518 EVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA 348 ++ + +G +G D A +PDLILMD+ + MDG EAT Q+K D L V+ LT+ Sbjct: 27 DIEIVGEGESGKDAIAKAHELKPDLILMDLLMDDMDGVEATTQIKKD--LPHIKVVMLTS 84 Query: 347 HAMASDREKAIAAGCDDYDTK 285 + +A+ AG D Y K Sbjct: 85 FIEDKEVYRALDAGVDSYILK 105
>SP0A_MOOTA (P52941) Stage 0 sporulation protein A homolog| Length = 256 Score = 47.0 bits (110), Expect = 5e-05 Identities = 23/89 (25%), Positives = 49/89 (55%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 +AH+G ++ + ++PD++++D+ +P +DG +L+ + ++ LTA S Sbjct: 34 VAHNGQETLELIQEQEPDIVILDIIMPHLDGIGVLEKLQVLNFEPRPKIVILTALGQESM 93 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQL 243 +++ G D Y KP +L L +++ QL Sbjct: 94 TMRSVELGADYYILKPFDLEVLGNRLRQL 122
>CHEB1_RALEJ (Q46V28) Chemotaxis response regulator protein-glutamate| methylesterase 1 (EC 3.1.1.61) Length = 341 Score = 47.0 bits (110), Expect = 5e-05 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Frame = -3 Query: 521 FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 FE+V +A DG V A PD+ILMD+ +PVMDG EATR++ A P++ +T Sbjct: 26 FEIVWVAGDGEQAVQLAASHTPDVILMDLLMPVMDGVEATRRIMA---ATPCPIVVVTTD 82 Query: 344 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 + + A G D ++ P L A+L Sbjct: 83 LGRNATQVFDAMGHGAIDA--VDTPTLTESDAKL 114
>CHEY_LISMO (P0A4H5) Chemotaxis protein cheY| Length = 119 Score = 47.0 bits (110), Expect = 5e-05 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPEL 378 M+ + FEVV A +G V +PD++ +D+++P MDG EA Q+ A DP Sbjct: 16 MIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDIVTLDITMPEMDGLEALAQIMAKDPSA 75 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 + A+ M D AI G D+ KP + R+L + Sbjct: 76 KVIMCSAMGQQGMVVD---AIKKGAKDFIVKPFQADRVLEAL 114
>CHEY_LISIN (P0A4H6) Chemotaxis protein cheY| Length = 119 Score = 47.0 bits (110), Expect = 5e-05 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKA-DPEL 378 M+ + FEVV A +G V +PD++ +D+++P MDG EA Q+ A DP Sbjct: 16 MIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDIVTLDITMPEMDGLEALAQIMAKDPSA 75 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 + A+ M D AI G D+ KP + R+L + Sbjct: 76 KVIMCSAMGQQGMVVD---AIKKGAKDFIVKPFQADRVLEAL 114
>CHEY_SALTY (P0A2D5) Chemotaxis protein cheY| Length = 128 Score = 47.0 bits (110), Expect = 5e-05 Identities = 26/91 (28%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + I+ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_SALTI (P0A2D6) Chemotaxis protein cheY| Length = 128 Score = 47.0 bits (110), Expect = 5e-05 Identities = 26/91 (28%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + I+ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY| Length = 128 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + ++ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGFGFVISDWNMPNMDGLELLKTIRADAGMASMPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLGKIFEK 125
>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3) (NHK1| protein) (SLN1 homolog) Length = 1070 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%) Frame = -3 Query: 521 FEVVLAHDGAAGVDTARREQP-----DLILMDMSLPVMDGWEATRQLKADPELQQTPVIA 357 ++V + DG DT + DLI MD+ +P +DG E+TR ++ P++A Sbjct: 958 YDVTVVKDGQEAYDTVKANMEEGKVFDLIFMDIQMPNLDGIESTRLIRQMG--CSAPIVA 1015 Query: 356 LTAHAMASDREKAIAAGCDDYDTKPIELPRL 264 L+A + S+ + + +G D + +KPI P L Sbjct: 1016 LSAFSEDSNIKDCMNSGMDMFISKPIRRPAL 1046
>NTRC_SALTY (P41789) Nitrogen regulation protein NR(I)| Length = 469 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/113 (24%), Positives = 51/113 (45%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 +L R L G +G + + PD++L D+ +P MDG +Q+K + Sbjct: 18 VLERALAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPM-- 75 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREP 213 PVI +TAH+ A G DY KP ++ ++ + + + +++P Sbjct: 76 LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQP 128
>CHEY_SHIFL (P0AE69) Chemotaxis protein cheY| Length = 128 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + ++ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ECOLI (P0AE67) Chemotaxis protein cheY| Length = 128 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + ++ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ECO57 (P0AE68) Chemotaxis protein cheY| Length = 128 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + ++ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>SP0A_CLOPA (P52940) Stage 0 sporulation protein A homolog| Length = 273 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTP-VIALTAHAM 339 V +A DG + ++PDL+++D+ +P MDG +L A+ + P VI L+A Sbjct: 34 VGIAKDGIEALKLIEEKKPDLVILDIIMPNMDGLVVLEKL-ANINIDPVPNVIVLSAVGQ 92 Query: 338 ASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 ++AI G D Y KP ++ +I Q+ Sbjct: 93 DKITQRAITLGADYYVVKPFDMDVFTKRIRQM 124
>SP0A_BREPA (P52929) Stage 0 sporulation protein A (Fragment)| Length = 212 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/90 (27%), Positives = 46/90 (51%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 +A++G V + PD++++D+ +P +DG Q++A Q +I LTA Sbjct: 34 VAYNGNEVVRLLQERVPDVLILDIIMPHLDGLAVLEQIQAMRLSPQPKIIMLTAFGQEEI 93 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 +KA+ G Y KP ++ L +I Q++ Sbjct: 94 TKKAVELGAAYYILKPFDMEVLAQRIRQII 123
>SPAR_BACSU (P33112) Subtilin biosynthesis regulatory protein spaR| Length = 220 Score = 46.2 bits (108), Expect = 8e-05 Identities = 26/75 (34%), Positives = 41/75 (54%) Frame = -3 Query: 458 DLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPI 279 DLIL+D+ +P +DG+E +Q++ L P++ LTA K + G DDY TKP Sbjct: 46 DLILLDVMMPDIDGFELCKQIRP---LVDCPILFLTAKTEEEAIVKGLITGGDDYITKPF 102 Query: 278 ELPRLLSKIAQLLER 234 + L +++ L R Sbjct: 103 GVRELSARVNAHLRR 117
>CHEB_HALSA (Q9HQW6) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 347 Score = 46.2 bits (108), Expect = 8e-05 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 17/153 (11%) Frame = -3 Query: 551 MLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ 375 ++S L G +VV A +GA +D QPD+I MD+ +P MDG EAT ++ + Q Sbjct: 16 VISDILEDGGVDVVGTAENGARALDAVTDVQPDVITMDVEMPEMDGIEATAEIMRE---Q 72 Query: 374 QTPVIALTAHAM--ASDREKAIAAGCDDYDTKP------------IELPRLLSKIAQLLE 237 TP++ ++A A +A+ G D KP EL + ++A Sbjct: 73 PTPILMVSALTTEDADATLEAMEKGAIDTFAKPGGTISTELSGHSEELVAAVERVASADP 132 Query: 236 R*SH--RREPWLPP*PSTAMKLRRQFLLFGVGT 144 H EP PP +T+ LL G T Sbjct: 133 TAGHDVEMEPASPPDATTSEYADNPTLLIGAST 165
>NISR_LACLA (Q07597) Nisin biosynthesis regulatory protein nisR| Length = 229 Score = 46.2 bits (108), Expect = 8e-05 Identities = 27/106 (25%), Positives = 55/106 (51%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQ 372 ++ L + +EV + + +D + DLIL+D+ + ++G E ++++ + Sbjct: 17 LMKTALEMRNYEVATHQNISLPLDITDFQGFDLILLDIMMSNIEGTEICKRIRREIS--- 73 Query: 371 TPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 TP+I ++A D + G DDY TKP L +L++K+ ++R Sbjct: 74 TPIIFVSAKDTEEDIINGLGIGGDDYITKPFSLKQLVAKVEANIKR 119
>SP0A_BACSU (P06534) Stage 0 sporulation protein A| Length = 267 Score = 46.2 bits (108), Expect = 8e-05 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Frame = -3 Query: 530 RKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIAL 354 ++ EV+ +A++G + + + PD++++D+ +P +DG +L+ +Q VI L Sbjct: 26 QEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQPNVIML 85 Query: 353 TAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 TA +KA+ G + KP ++ L+ I Q+ Sbjct: 86 TAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQV 122
>CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY| Length = 128 Score = 46.2 bits (108), Expect = 8e-05 Identities = 25/91 (27%), Positives = 43/91 (47%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG ++ + ++ D ++P MDG E + ++AD + PV+ +TA A + Sbjct: 35 AEDGLDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 A AG Y KP L K+ ++ E+ Sbjct: 95 IAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog| Length = 130 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = -3 Query: 551 MLSRRLTRKGFEVVL-AHDGAAGVDT-ARREQPDLILMDMSLPVMDGWEATRQLKADPEL 378 ++ LTR G + VL A G D + E +++ D ++P M+G E ++++A+ + Sbjct: 15 IIKNTLTRLGHDDVLEAEHGVEAWDLLTKNEDVKVLITDWNMPEMNGLELVKKVRAEKKY 74 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 + P+I +T ++ A+ AG ++Y KP L K+ +L Sbjct: 75 EDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDVL 120
>CHEB3_PSEPK (Q88MS5) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 337 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/43 (51%), Positives = 30/43 (69%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 V +A +GA V + PDLILMD+ +PVMDG EATR++ A+ Sbjct: 29 VWVASNGAEAVQRCTEQLPDLILMDLIMPVMDGVEATRRIMAE 71
>RCP1_SYNY3 (Q55169) Response regulator rcp1| Length = 147 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%) Frame = -3 Query: 518 EVVLAHDGAAGVDTARRE-------QPDLILMDMSLPVMDGWEATRQLKADPELQQTPVI 360 E+++ DG A + +++ +P+LIL+D++LP DG E ++K +P+L++ PV+ Sbjct: 36 ELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVV 95 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 LT D + + Y TK L L + Sbjct: 96 VLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMV 131
>LIAR_BACSU (O32197) Sensory transduction protein liaR| Length = 211 Score = 45.8 bits (107), Expect = 1e-04 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 15/116 (12%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A DG+ GV A PD+ILMD+ + MDG EAT+Q+ EL +I LT+ Sbjct: 33 ASDGSEGVRLAVELSPDVILMDLVMEGMDGIEATKQICR--ELSDPKIIVLTSFIDDDKV 90 Query: 326 EKAIAAGCDDY---DTKPIEL-----------PRLLSKIA-QLLER*SHRREPWLP 204 I AG Y +K E+ P+L SK+A ++L R H E LP Sbjct: 91 YPVIEAGALSYLLKTSKAAEIADAIRAASKGEPKLESKVAGKVLSRLRHSGENALP 146
>CHEB_SYMTH (Q67P67) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 362 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAM--AS 333 A DG G++ + QPD++ +D+ +P +DG+ R++ A + TPV+ +++H A Sbjct: 40 ARDGQDGLEKVLQLQPDVVTLDIEMPRLDGYGTLREIMA---RRPTPVVMVSSHTREGAE 96 Query: 332 DREKAIAAGCDDYDTKP 282 +A+A G D+ KP Sbjct: 97 ATIRALALGAVDFVAKP 113
>TRPO_PSEAE (P24908) Putative transcriptional regulator| Length = 207 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = -3 Query: 530 RKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIAL 354 R GF +V A +GA + AR++ PDL ++D+ +P +DG E +LK+ T V+ L Sbjct: 23 RDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKS--LKLDTKVLVL 80 Query: 353 TAHAMASDREKAIAAGCDDYDTKPIELPRLL 261 T A + + AG + +K L LL Sbjct: 81 TRQNPAQFAPRCLQAGAMGFVSKRENLSELL 111
>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Frame = -3 Query: 605 RIRXXXXXXXXXXXXXXDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 426 R+R +L R L + G +V+ + +D E D +++D+ +P Sbjct: 409 RVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPG 468 Query: 425 MDGWEATRQLKADPE--LQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 M+G + +QL+ ++ TPV+ L+A AG + KP+ +LL + Sbjct: 469 MNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTL 528 Query: 251 AQL 243 A L Sbjct: 529 ADL 531
>SP0A_CLOBE (P52936) Stage 0 sporulation protein A homolog (Fragment)| Length = 223 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTP-VIALTAHAMAS 333 +A DG+ ++ +PDL+++D+ +P +DG +L +L++ P +I L+A Sbjct: 36 IAKDGSEALELIVERKPDLVILDIIMPHLDGLGVLEKLNT-MQLEKVPRIIILSAVGQDK 94 Query: 332 DREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 ++AI G D Y KP ++ +I ++ Sbjct: 95 ITQQAITLGADYYTVKPFDMEVFTKRIREM 124
>NARP_ECOLI (P31802) Nitrate/nitrite response regulator protein narP| Length = 215 Score = 45.1 bits (105), Expect = 2e-04 Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Frame = -3 Query: 524 GFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA 348 G EVV A DGA+ +D A R D+IL+D+++ M G + L+ D Q +I LT Sbjct: 31 GSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQ--IIILTV 88 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 +SD I AG D Y K + LL I Sbjct: 89 SDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120
>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 45.1 bits (105), Expect = 2e-04 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Frame = -3 Query: 605 RIRXXXXXXXXXXXXXXDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 426 R+R +L R L + G +V+ + +D E D +++D+ +P Sbjct: 409 RVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPG 468 Query: 425 MDGWEATRQLKADPE--LQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 M+G + +QL+ ++ TPV+ L+A AG + KP+ +LL + Sbjct: 469 MNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKLLDTL 528 Query: 251 AQL 243 A L Sbjct: 529 ADL 531
>CHEB3_PSESM (Q886S8) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTP--VIALTAHAMA 336 +A +GA V + + PDLILMD+ +PVMDG EATR++ A +TP ++ +T Sbjct: 31 VAANGADAVQRSIEQTPDLILMDLIMPVMDGVEATRRIMA-----ETPCAIVIVTVDREQ 85 Query: 335 SDREKAIAAG---CDDYDTKPIELPRLLSKIAQLLER 234 + R A G D DT I P A LL + Sbjct: 86 NMRRVFEAMGHGALDVVDTPAIGGPNPREAAAPLLRK 122
>CHEB3_PSE14 (Q48F23) Chemotaxis response regulator protein-glutamate| methylesterase 3 (EC 3.1.1.61) Length = 336 Score = 45.1 bits (105), Expect = 2e-04 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTP--VIALTAHAMA 336 +A +GA V + PDLILMD+ +PVMDG EATR++ A +TP ++ +T Sbjct: 31 VASNGADAVQRCVEQTPDLILMDLIMPVMDGVEATRRIMA-----ETPCAIVIVTVDREQ 85 Query: 335 SDREKAIAAG---CDDYDTKPIELPRLLSKIAQLLER 234 + R A G D DT I P A LL + Sbjct: 86 NMRRVFEAMGHGALDVVDTPAIGGPNPKEAAAPLLRK 122
>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD---PE 381 +L ++L G V+ A G A + R D+++ D ++P + G+E R+++A P Sbjct: 987 LLRQQLDYLGQRVIAADSGEAALALWREHAFDVVITDCNMPGISGYELARRIRAAEAAPG 1046 Query: 380 LQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +T I TA A + ++ AAG DD KPI + L ++ + + R Sbjct: 1047 YGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVAR 1097
>CHEB_METMP (P62647) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 365 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V A DG + ++ +P++I MD+ +P+M+G +AT+Q+ A + TP++ L+A Sbjct: 32 VATAKDGKEAFELVKKLEPNVITMDVEMPIMNGIDATKQIMA---YKPTPILMLSAVTKQ 88 Query: 335 SDRE--KAIAAGCDDYDTKP 282 KA+ G D+ KP Sbjct: 89 GSEATLKALDNGAVDFIEKP 108
>CHEB2_BURS3 (Q393F2) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 339 Score = 45.1 bits (105), Expect = 2e-04 Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 11/141 (7%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 +A DG VD PDL+LMD+ +P +DG ATR++ A V A + +S Sbjct: 31 VATDGDEAVDFCVAHPPDLVLMDLVMPKVDGVAATRRIMARAPCAILVVTASVSANTSSV 90 Query: 329 REKAIAAGCDDYDTKPIEL--------PRLLSKIAQLLER*SHRREPWLPP*PSTAMKLR 174 E A D DT + L LL+KI Q+ R +PP P+ R Sbjct: 91 YEAMGAGALDAVDTPTLALGLSTDASPQALLAKIDQIGRLLESRTAALVPPGPAPE---R 147 Query: 173 RQFLLFGVGTTF---TAIAAI 120 Q L +G + TA+ A+ Sbjct: 148 GQPTLVAIGASAGGPTALTAL 168
>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)| (EC 3.1.3.-) Length = 849 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -3 Query: 536 LTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQ-QTPVI 360 L + G + A++G V+ + DLILMD+ +PVM+G++A++++K EL QTP++ Sbjct: 740 LNQLGVNSLQANNGENAVEVFKANHVDLILMDVQMPVMNGFDASQRIK---ELSPQTPIV 796 Query: 359 ALTAHA 342 AL+ + Sbjct: 797 ALSGES 802
>BCER_BACSU (O34951) Sensory transduction protein bceR| Length = 231 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/105 (24%), Positives = 50/105 (47%) Frame = -3 Query: 539 RLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVI 360 RLT ++V D + + PD +++D+ LP DG+ R +++ + P++ Sbjct: 20 RLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNV---PIL 76 Query: 359 ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SH 225 L++ +D ++ G DD+ KP L++KI + R H Sbjct: 77 FLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHH 121
>SP0A_CLOAB (P58253) Stage 0 sporulation protein A homolog| Length = 281 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/91 (25%), Positives = 44/91 (48%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 V +A DG + ++PDL+++D+ +P +DG +L +I L+A Sbjct: 34 VGIAKDGVEALKLIENKKPDLVVLDIIMPRLDGLGVLEKLNNKDAENLPRIIVLSAVGQD 93 Query: 335 SDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 ++AI G D Y KP ++ ++I ++ Sbjct: 94 KITQRAITLGADYYVVKPFDMDVFTNRIREM 124
>CHEB1_VIBVY (Q7MIQ5) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 376 Score = 44.7 bits (104), Expect = 2e-04 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA--HAMA 336 +A +G V+ A+R +PD+I MD+ +PVMDG A R++ A TP++ ++ H A Sbjct: 33 VAVNGKEAVEKAKRLKPDVITMDIEMPVMDGISAVREIMAS---VPTPILMFSSLTHDGA 89 Query: 335 SDREKAIAAGCDDYDTKPIE 276 A+ AG D+ K E Sbjct: 90 KATLDALDAGALDFLPKKFE 109
>CHEB1_VIBVU (Q8DB67) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 376 Score = 44.7 bits (104), Expect = 2e-04 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA--HAMA 336 +A +G V+ A+R +PD+I MD+ +PVMDG A R++ A TP++ ++ H A Sbjct: 33 VAVNGKEAVEKAKRLKPDVITMDIEMPVMDGISAVREIMAS---VPTPILMFSSLTHDGA 89 Query: 335 SDREKAIAAGCDDYDTKPIE 276 A+ AG D+ K E Sbjct: 90 KATLDALDAGALDFLPKKFE 109
>HNR_SHIFL (P0AEV3) Protein hnr| Length = 337 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G VLA DG ++ PDL++ D+++P M+G + ++ + QTPV+ ++A Sbjct: 31 GATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISAT 88 Query: 344 AMASDREKAIAAGCDDYDTKPIE 276 +D KA+ G +D KP++ Sbjct: 89 ENMADIAKALRLGVEDVLLKPVK 111
>HNR_ECOLI (P0AEV1) Protein hnr| Length = 337 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G VLA DG ++ PDL++ D+++P M+G + ++ + QTPV+ ++A Sbjct: 31 GATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISAT 88 Query: 344 AMASDREKAIAAGCDDYDTKPIE 276 +D KA+ G +D KP++ Sbjct: 89 ENMADIAKALRLGVEDVLLKPVK 111
>HNR_ECO57 (P0AEV2) Protein hnr| Length = 337 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/83 (30%), Positives = 45/83 (54%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 G VLA DG ++ PDL++ D+++P M+G + ++ + QTPV+ ++A Sbjct: 31 GATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISAT 88 Query: 344 AMASDREKAIAAGCDDYDTKPIE 276 +D KA+ G +D KP++ Sbjct: 89 ENMADIAKALRLGVEDVLLKPVK 111
>CSSR_BACSU (O32192) Transcriptional regulatory protein cssR| Length = 225 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 4/109 (3%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQ---PDLILMDMSLPVMDGWEATRQLKA-DP 384 +L++ L +G+ + G + AR++ P L ++D+ LP DG+ +++KA DP Sbjct: 17 LLTKYLENEGWNITSFTKG----EDARKKMTPSPHLWILDIMLPDTDGYTLIKEIKAKDP 72 Query: 383 ELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 237 ++ PVI ++A DR + G +DY +KP L+ ++ +LL+ Sbjct: 73 DV---PVIFISARDADIDRVLGLELGSNDYISKPFLPRELIIRVQKLLQ 118
>CHEB2_PSEU2 (Q4ZWW3) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 336 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 +A +GA V + PDLILMD+ +PVMDG EATR++ A+ Sbjct: 31 VASNGADAVQRCVEQTPDLILMDLIMPVMDGVEATRRIMAE 71
>CHEB1_PSEPF (Q3KHF6) Chemotaxis response regulator protein-glutamate| methylesterase 1 (EC 3.1.1.61) Length = 336 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 V +A +GA V PDLILMD+ +PVMDG EATR++ A+ Sbjct: 29 VWVASNGAEAVRLCAENTPDLILMDLIMPVMDGVEATRRIMAE 71
>SP0A_BACME (P52932) Stage 0 sporulation protein A (Fragment)| Length = 212 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Frame = -3 Query: 530 RKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIAL 354 ++ EV+ +A++G + + + PD++++D+ +P +DG QLK + VI L Sbjct: 26 QEDMEVIGVAYNGQECLSILKDKNPDVLVLDIIMPHLDGLAVLGQLKEMKKENYPNVIML 85 Query: 353 TAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 243 TA +KA+ G + KP ++ L++ I Q+ Sbjct: 86 TAFGQEDVTKKAVDLGAAYFILKPFDMENLVNHIRQV 122
>PILR_PSEAE (Q00934) Type 4 fimbriae expression regulatory protein pilR| Length = 445 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/77 (36%), Positives = 40/77 (51%) Frame = -3 Query: 470 REQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYD 291 RE DL L DM LP G + + ++ QTPV +TA+ +A+ AG D+ Sbjct: 45 REPFDLCLTDMRLPDGSGLDLVQYIQQ--RHPQTPVAMITAYGSLDTAIQALKAGAFDFL 102 Query: 290 TKPIELPRLLSKIAQLL 240 TKP++L RL +A L Sbjct: 103 TKPVDLGRLRELVATAL 119
>SP0A_BACST (P52934) Stage 0 sporulation protein A| Length = 259 Score = 44.3 bits (103), Expect = 3e-04 Identities = 25/88 (28%), Positives = 45/88 (51%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDR 327 A++G + ++PD++L+D+ +P +DG +++A E Q VI LTA Sbjct: 34 AYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFE-HQPNVIMLTAFGQEDVT 92 Query: 326 EKAIAAGCDDYDTKPIELPRLLSKIAQL 243 +KA+ G + KP ++ L I Q+ Sbjct: 93 KKAVELGASYFILKPFDMENLAHHIRQV 120
>YDFI_BACSU (P96686) Sensory transduction protein ydfI| Length = 213 Score = 43.9 bits (102), Expect = 4e-04 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -3 Query: 506 AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 345 A +G V A +PD+ILMD+ +P M G EA +Q+K E TP+I LT + Sbjct: 33 AENGKVAVRLADELEPDIILMDLYMPEMSGLEAIKQIK---EKHDTPIIILTTY 83
>ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7| Length = 206 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/92 (22%), Positives = 50/92 (54%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 L DG G + + +LI+ D S+P + G++ +++K ++ PV+ +++ + Sbjct: 63 LGLDGGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPR 122 Query: 329 REKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 ++ + G +++ KP++L + +I QL+ R Sbjct: 123 IQECLKEGAEEFLLKPVKLAD-VKRIKQLIMR 153
>ARCA_HAEIN (P44918) Aerobic respiration control protein arcA homolog| Length = 236 Score = 43.9 bits (102), Expect = 4e-04 Identities = 29/98 (29%), Positives = 46/98 (46%) Frame = -3 Query: 527 KGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA 348 +G++V A +G +L++MD++LP +G R+L+ + L P+I LT Sbjct: 26 EGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLLARELREELSL---PLIFLTG 82 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 D+ + G DDY TKP L + LL R Sbjct: 83 RDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120
>SP0A_BACSH (P42012) Stage 0 sporulation protein A| Length = 263 Score = 43.9 bits (102), Expect = 4e-04 Identities = 40/166 (24%), Positives = 72/166 (43%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMA 336 + A +G + PD++L+D+ +P +DG + + + VI LTA Sbjct: 32 IATASNGKVCLQMLEEYTPDILLLDIIMPHLDGLAVLEAMYQNDRMSSIQVIMLTAFGQE 91 Query: 335 SDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQFLLF 156 ++A+ G + KP E +L+ KI + + + P+T KL + L Sbjct: 92 DVMKQAVDLGASYFMLKPFEFDQLVQKILHCAGQKASIPKKASVLQPTTPQKLNQHQL-- 149 Query: 155 GVGTTFTAIAAISLSDVITNTRLSESSREEVQSLLQEFDIKLIETV 18 +T TAI I V + + RE +Q + + DI+L+ +V Sbjct: 150 --DSTITAI--IKEIGVPAHIKGYSYLREAIQMVFE--DIELLGSV 189
>Y0G0_VIBCH (Q9KL96) Hypothetical response regulatory protein VCA0850| Length = 261 Score = 43.9 bits (102), Expect = 4e-04 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVI-ALTAHAM 339 V A +G + + QPD++ +D+ +P MDG E R+L P++ I A +A+ Sbjct: 35 VASAENGQIALQAIEQHQPDVVFLDIRMPKMDGIEVARRLLQQPKVPLVVFITAYDEYAV 94 Query: 338 ASDREKAIAAGCDDYDTKPIELPRLLS---KIAQLLER 234 ++ AI DY KP+ RL S K+ Q L R Sbjct: 95 SAFETHAI-----DYLLKPLSSSRLASCCEKLQQQLRR 127
>CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 335 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 V +A +GA V + PD++LMD+ +PVMDG EATR++ A+ Sbjct: 29 VWVASNGAEAVTQCAADTPDVVLMDLLMPVMDGVEATRRIMAE 71
>CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog| Length = 124 Score = 43.5 bits (101), Expect = 5e-04 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLA--HDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPEL 378 ++ L+R G+E VL H A +++ D ++P M+G + ++++AD Sbjct: 15 IIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRF 74 Query: 377 QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 ++ P+I +T ++ A+ AG ++Y KP L K+ +L Sbjct: 75 KEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 120
>CHEV_BACSU (P37599) Chemotaxis protein cheV| Length = 303 Score = 43.5 bits (101), Expect = 5e-04 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = -3 Query: 482 DTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGC 303 +T +Q D+I+ D+ +P MDG T+ LK +P+ PV+ ++ R + G Sbjct: 222 ETDLSKQIDMIITDIEMPKMDGHRLTKLLKENPKSSDVPVMIFSSLITDDLRHRGEVVGA 281 Query: 302 DDYDTKPIELPRLLSKI 252 D+ +KP E+ L+ K+ Sbjct: 282 DEQISKP-EISDLIKKV 297
>DEGU_BREBE (P54662) Transcriptional regulatory protein degU| Length = 236 Score = 43.5 bits (101), Expect = 5e-04 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Frame = -3 Query: 521 FEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTP---VIAL 354 FEVV DG V+ + PD+ILMD+++P ++G EATR L +Q+ P V+ L Sbjct: 35 FEVVADGEDGENAVELVEKYNPDVILMDINMPKVNGVEATRDL-----IQRYPDVKVLVL 89 Query: 353 TAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 252 + H S + G Y K ++ L+ + Sbjct: 90 SIHDDESYVTHVLKTGASGYLLKEMDADALIEAV 123
>LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 43.5 bits (101), Expect = 5e-04 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = -3 Query: 524 GFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVI--ALT 351 G +V DG ++ + DL+LMD LP +DG E TR +K ++ PV+ A T Sbjct: 753 GLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIK---KVLHLPVVVYACT 809 Query: 350 AHAMASDREKAIAAGCDDYDTKPIE 276 A + R+ AG + KP++ Sbjct: 810 ADGLEETRQAFFHAGAEYVLVKPLK 834
>DCTR_BACHD (Q9K998) Probable C4-dicarboxylate response regulator dctR| Length = 230 Score = 43.1 bits (100), Expect = 7e-04 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Frame = -3 Query: 524 GFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA 348 GF +V G G+ R QPDLIL+D+ +P DG +Q++ + +IA+TA Sbjct: 31 GFTIVGTTATGEEGMVKTRELQPDLILLDIFMPKQDGLSFIKQIR--EQYIDVDIIAVTA 88 Query: 347 HAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 237 + + G DY KP RL + + Q E Sbjct: 89 ANDTKTIKTLLRYGVMDYLVKPFTFERLKAALTQYEE 125
>CHEB1_VIBPA (Q87MK5) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 369 Score = 43.1 bits (100), Expect = 7e-04 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTA--HAMA 336 +A +G V+ A+ +PD+I MD+ +PVMDG A R++ A TP++ ++ H A Sbjct: 33 VAVNGREAVEKAKALKPDVITMDIEMPVMDGITAVREIMA---ASPTPILMFSSLTHDGA 89 Query: 335 SDREKAIAAGCDDYDTKPIE---------LPRLLSKIAQLLER*SHRREPWLPP*PSTA 186 A+ AG D+ K E + L ++ Q+ + + R P P +T+ Sbjct: 90 KATLDALDAGALDFLPKKFEDIARNRDEAVSLLQQRVIQIASKRAFMRRPVARPAAATS 148
>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)| Length = 539 Score = 43.1 bits (100), Expect = 7e-04 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 5/108 (4%) Frame = -3 Query: 548 LSRRLTRKGF-----EVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADP 384 LSRR+T K +V +A DG V+ A DLILMD LP +DG T ++ Sbjct: 378 LSRRMTIKFLTSFDCQVDVAVDGIGAVNKANAGGFDLILMDFILPNLDGLSVTCLIRQYD 437 Query: 383 ELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 240 TP++A+T++ +D G D KP LL + + L Sbjct: 438 --HNTPILAITSNISMNDAVTYFNHGVTDLLVKPFTKLTLLQLLKKQL 483
>CHEB1_VIBCH (Q9KQD8) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 377 Score = 43.1 bits (100), Expect = 7e-04 Identities = 28/78 (35%), Positives = 42/78 (53%) Frame = -3 Query: 509 LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASD 330 +A +G V+ A R +PD+I MD+ +PVMDG A R++ A+ + +LT H A Sbjct: 33 VAVNGKEAVEKAARLKPDVITMDIEMPVMDGISAVREIMANNPVPILMFSSLT-HDGAKA 91 Query: 329 REKAIAAGCDDYDTKPIE 276 A+ AG D+ K E Sbjct: 92 TLDALDAGALDFLPKKFE 109
>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 43.1 bits (100), Expect = 7e-04 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD---PE 381 +L ++L G VV A G A + D+++ D ++P ++G+E R+++A P Sbjct: 987 LLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNMPGINGYELARRIRAAEAAPG 1046 Query: 380 LQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +T I TA A + ++ AAG DD KPI + L ++ + R Sbjct: 1047 YGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAAR 1097
>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 43.1 bits (100), Expect = 7e-04 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Frame = -3 Query: 551 MLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD---PE 381 +L ++L G VV A G A + D+++ D ++P ++G+E R+++A P Sbjct: 987 LLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNMPGINGYELARRIRAAEAAPG 1046 Query: 380 LQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 234 +T I TA A + ++ AAG DD KPI + L ++ + R Sbjct: 1047 YGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAAR 1097
>CHEB1_PSEF5 (Q4KHL8) Chemotaxis response regulator protein-glutamate| methylesterase 1 (EC 3.1.1.61) Length = 336 Score = 43.1 bits (100), Expect = 7e-04 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = -3 Query: 515 VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKAD 387 V +A +GA V PDLILMD+ +PVMDG EATR++ A+ Sbjct: 29 VWVATNGAEAVKYCAELTPDLILMDLIMPVMDGVEATRRIMAE 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,076,591 Number of Sequences: 219361 Number of extensions: 1792350 Number of successful extensions: 7177 Number of sequences better than 10.0: 473 Number of HSP's better than 10.0 without gapping: 6662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7022 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
