ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart14c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell differ... 85 2e-16
2PILH_PSEAE (P43501) Protein pilH 84 3e-16
3BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase... 84 3e-16
4BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase... 84 3e-16
5BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase... 84 3e-16
6GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3) 83 8e-16
7BARA_SHIFL (P59342) Signal transduction histidine-protein kinase... 82 1e-15
8PRRA_MYCTU (P0A5Z6) Transcriptional regulatory protein prrA 82 1e-15
9PRRA_MYCBO (P0A5Z7) Transcriptional regulatory protein prrA 82 1e-15
10YYCF_BACSU (P37478) Transcriptional regulatory protein yycF 82 2e-15
11PRRA_MYCLE (Q50136) Transcriptional regulatory protein prrA 82 2e-15
12ARLR_STAAW (P0C001) Response regulator arlR 80 4e-15
13ARLR_STAAU (Q9KJN4) Response regulator arlR 80 4e-15
14ARLR_STAAS (Q6G9E6) Response regulator arlR 80 4e-15
15ARLR_STAAR (Q6GGZ3) Response regulator arlR 80 4e-15
16ARLR_STAAM (P0C000) Response regulator arlR 80 4e-15
17ARLR_STAAC (Q5HG04) Response regulator arlR 80 4e-15
18ARLR_STAAN (Q99U73) Response regulator arlR 80 4e-15
19YXDJ_BACSU (P42421) Sensory transduction protein yxdJ 80 4e-15
20PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory... 80 5e-15
21YEDW_ECOLI (P76340) Probable transcriptional regulatory protein ... 79 8e-15
22IRLR_BURPS (O31395) Transcriptional activator protein irlR 79 8e-15
23PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR 79 1e-14
24COPR_PSESM (Q02540) Transcriptional activator protein copR 79 1e-14
25PHOP_BACSU (P13792) Alkaline phosphatase synthesis transcription... 78 2e-14
26REGX3_MYCSM (Q9F868) Sensory transduction protein regX3 78 2e-14
27REGX3_MYCTU (Q11156) Sensory transduction protein regX3 78 2e-14
28REGX3_MYCBO (O07130) Sensory transduction protein regX3 78 2e-14
29CZCR_RALME (Q44006) Transcriptional activator protein czcR 77 3e-14
30CPXR_SHIFL (P0AE90) Transcriptional regulatory protein cpxR 77 3e-14
31CPXR_ECOLI (P0AE88) Transcriptional regulatory protein cpxR 77 3e-14
32CPXR_ECO57 (P0AE89) Transcriptional regulatory protein cpxR 77 3e-14
33YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG 77 3e-14
34CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR 77 3e-14
35CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR 77 3e-14
36CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR 77 3e-14
37YSO1_PLEBO (P51586) Hypothetical 14.6 kDa protein in sodA1 3'reg... 77 4e-14
38SILR_SALTY (Q9ZHD3) Probable transcriptional regulatory protein ... 77 4e-14
39YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (O... 75 1e-13
40YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ 74 3e-13
41YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (O... 74 4e-13
42TCTD_SALTY (P22104) Transcriptional regulatory protein tctD 74 4e-13
43YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (O... 74 4e-13
44PFER_PSEAE (Q04803) Transcriptional activator protein pfeR 74 4e-13
45AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1 74 4e-13
46YRKP_BACSU (P54443) Hypothetical sensory transduction protein yrkP 74 5e-13
47YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (O... 73 6e-13
48PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory... 72 1e-12
49PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory... 72 1e-12
50PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory... 72 1e-12
51PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory... 72 1e-12
52PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory... 72 1e-12
53MTRA_MYCTU (P0A5Z4) DNA-binding response regulator mtrA 70 4e-12
54MTRA_MYCPA (Q93CB8) DNA-binding response regulator mtrA 70 4e-12
55MTRA_MYCLE (Q9CCJ2) DNA-binding response regulator mtrA 70 4e-12
56MTRA_MYCBO (P0A5Z5) DNA-binding response regulator mtrA 70 4e-12
57MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe... 70 5e-12
58ATOC_ECOLI (Q06065) Acetoacetate metabolism regulatory protein a... 70 5e-12
59YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (O... 70 7e-12
60YCF29_PORPU (P51343) Probable transcriptional regulator ycf29 69 9e-12
61CREB_ECOLI (P08368) Transcriptional regulatory protein creB 69 9e-12
62EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3) 69 1e-11
63YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2) 69 1e-11
64YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA 69 1e-11
65MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase m... 69 1e-11
66QSEB_HAEIN (P45337) Transcriptional regulatory protein qseB 68 3e-11
67KDPE_ECOLI (P21866) KDP operon transcriptional regulatory protei... 68 3e-11
68RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular ... 67 4e-11
69CHVI_AGRTU (Q07783) Transcriptional regulatory protein chvI 67 4e-11
70DLTR_STRA5 (P0A4I0) Transcriptional regulatory protein dltR 67 6e-11
71DLTR_STRA3 (P0A4H9) Transcriptional regulatory protein dltR 67 6e-11
72RPRY_BACFR (Q9AE24) Transcriptional regulatory protein rprY 67 6e-11
73RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular ... 66 7e-11
74SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1... 66 7e-11
75RESD_BACSU (P35163) Transcriptional regulatory protein resD 66 7e-11
76SRRA_STAAW (Q7A0U4) Transcriptional regulatory protein srrA (Sta... 66 7e-11
77SRRA_STAAU (Q9L524) Transcriptional regulatory protein srrA (Sta... 66 7e-11
78SRRA_STAAS (Q6G972) Transcriptional regulatory protein srrA (Sta... 66 7e-11
79SRRA_STAAR (Q6GGK6) Transcriptional regulatory protein srrA (Sta... 66 7e-11
80SRRA_STAAN (Q7A5H6) Transcriptional regulatory protein srrA (Sta... 66 7e-11
81SRRA_STAAM (Q7A2R6) Transcriptional regulatory protein srrA (Sta... 66 7e-11
82SRRA_STAAC (Q5HFT0) Transcriptional regulatory protein srrA (Sta... 66 7e-11
83EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3) 66 7e-11
84CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (R... 66 1e-10
85RCAC_FREDI (Q01473) Protein rcaC 65 1e-10
86CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyroph... 65 1e-10
87RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Ca... 65 2e-10
88PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory... 65 2e-10
89YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL 64 3e-10
90LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ... 64 3e-10
91LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ... 64 3e-10
92SPHR_SYNP7 (P39663) Alkaline phosphatase synthesis transcription... 64 5e-10
93SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1 64 5e-10
94CHVI_RHIME (P50350) Transcriptional regulatory protein chvI 63 6e-10
95ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein a... 63 6e-10
96ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein a... 63 6e-10
97ARCB_ECO57 (P58363) Aerobic respiration control sensor protein a... 63 6e-10
98PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory... 63 6e-10
99TCSA_EMENI (Q9P896) Two-component system protein A (EC 2.7.13.3) 63 8e-10
100SP0A_CLODI (P52938) Stage 0 sporulation protein A homolog 62 1e-09
101CHEY_BACSU (P24072) Chemotaxis protein cheY homolog 62 1e-09
102QSEB_SALTY (P66795) Transcriptional regulatory protein qseB 62 1e-09
103QSEB_SALTI (P66796) Transcriptional regulatory protein qseB 62 1e-09
104TORR_ECOLI (P38684) TorCAD operon transcriptional regulatory pro... 62 1e-09
105TORR_ECO57 (P58357) TorCAD operon transcriptional regulatory pro... 62 2e-09
106CPXR_HAEIN (P44895) Transcriptional regulatory protein cpxR homolog 62 2e-09
107GTCR_ANEMI (Q44929) Response regulator gtcR 61 2e-09
108QSEB_ECOLI (P52076) Transcriptional regulatory protein qseB 61 3e-09
109QSEB_ECO57 (Q8XBS3) Transcriptional regulatory protein qseB 60 4e-09
110YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (O... 60 4e-09
111PHOP_SALTY (P14146) Virulence transcriptional regulatory protein... 60 7e-09
112PHOP_SALTI (Q8Z7H2) Virulence transcriptional regulatory protein... 60 7e-09
113PHOP_SALPA (Q5PMJ1) Virulence transcriptional regulatory protein... 60 7e-09
114SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitiv... 60 7e-09
115CUTR_STRLI (P0A4I2) Transcriptional regulatory protein cutR (Def... 60 7e-09
116CUTR_STRCO (P0A4I1) Transcriptional regulatory protein cutR (Def... 60 7e-09
117ZRAR_SALTY (P25852) Transcriptional regulatory protein zraR 59 9e-09
118ZRAR_SALTI (Q8Z333) Transcriptional regulatory protein zraR 59 9e-09
119ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR 59 9e-09
120VANR_ENTFA (Q47744) Regulatory protein vanRB 59 9e-09
121PETR_RHOCA (P31079) Protein petR 59 1e-08
122CIAR_STRR6 (P0A4H8) Transcriptional regulatory protein ciaR 58 2e-08
123CIAR_STRPN (P0A4H7) Transcriptional regulatory protein ciaR 58 2e-08
124YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29 58 2e-08
125OMPR_SHIFL (P0AA21) Transcriptional regulatory protein ompR 58 2e-08
126OMPR_SALTY (P0AA19) Transcriptional regulatory protein ompR 58 2e-08
127OMPR_SALTI (P0AA20) Transcriptional regulatory protein ompR 58 2e-08
128OMPR_ECOLI (P0AA16) Transcriptional regulatory protein ompR 58 2e-08
129OMPR_ECOL6 (P0AA17) Transcriptional regulatory protein ompR 58 2e-08
130OMPR_ECO57 (P0AA18) Transcriptional regulatory protein ompR 58 2e-08
131BCER_BACHD (Q9K621) Sensory transduction protein bceR 58 2e-08
132PHOP_SALCH (Q57QC3) Virulence transcriptional regulatory protein... 58 3e-08
133BAER_ECOLI (P69228) Transcriptional regulatory protein baeR 58 3e-08
134BAER_ECOL6 (P69229) Transcriptional regulatory protein baeR 58 3e-08
135PHOP_SHIFL (Q83RR0) Virulence transcriptional regulatory protein... 58 3e-08
136PHOP_ECOL6 (Q8CXZ9) Transcriptional regulatory protein phoP 58 3e-08
137PHOP_ECOLI (P23836) Transcriptional regulatory protein phoP 57 3e-08
138CHEB_ARCFU (O29221) Chemotaxis response regulator protein-glutam... 57 3e-08
139BCER_BACSU (O34951) Sensory transduction protein bceR 57 3e-08
140ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR 57 4e-08
141SP0A_BACAN (P52928) Stage 0 sporulation protein A 57 4e-08
142PILG_PSEAE (P46384) Protein pilG 57 4e-08
143SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F ... 57 6e-08
144CHEB_HALMA (Q5V0B3) Chemotaxis response regulator protein-glutam... 57 6e-08
145ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR 56 8e-08
146LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ... 56 8e-08
147NISR_LACLA (Q07597) Nisin biosynthesis regulatory protein nisR 56 8e-08
148SP0A_BACTU (P0A4I4) Stage 0 sporulation protein A 56 1e-07
149SP0A_BACCR (P0A4I3) Stage 0 sporulation protein A 56 1e-07
150TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC... 56 1e-07
151FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.... 55 1e-07
152DCTR_BACME (P39486) Probable C4-dicarboxylate response regulator... 55 1e-07
153PHOP_ECO57 (Q8X738) Transcriptional regulatory protein phoP 55 2e-07
154CHEY_PSEAE (Q51455) Chemotaxis protein cheY 54 3e-07
155BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC ... 54 3e-07
156CHVI_RHISN (P50351) Transcriptional regulatory protein chvI 54 3e-07
157LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ... 54 4e-07
158LUXO_VIBVY (Q7MM78) Regulatory protein luxO 54 5e-07
159LUXO_VIBVU (Q8CWJ5) Regulatory protein luxO 54 5e-07
160CHEB_HALSA (Q9HQW6) Chemotaxis response regulator protein-glutam... 54 5e-07
161CHEB_NATPD (Q3IRR4) Chemotaxis response regulator protein-glutam... 54 5e-07
162CHEY_TREPA (P96126) Chemotaxis protein cheY 54 5e-07
163REGX3_MYCLE (P54884) Sensory transduction protein regX3 54 5e-07
164VRAR_STAES (Q8CNP9) Response regulator protein vraR 53 6e-07
165VRAR_STAEQ (Q5HN50) Response regulator protein vraR 53 6e-07
166VRAR_STAAW (Q7A0I0) Response regulator protein vraR 53 6e-07
167VRAR_STAAU (P0C0Z1) Response regulator protein vraR 53 6e-07
168VRAR_STAAS (Q6G850) Response regulator protein vraR 53 6e-07
169VRAR_STAAR (Q6GFH3) Response regulator protein vraR 53 6e-07
170VRAR_STAAN (Q7A4R9) Response regulator protein vraR 53 6e-07
171VRAR_STAAM (Q7A2Q1) Response regulator protein vraR 53 6e-07
172VRAR_STAAC (Q5HEP0) Response regulator protein vraR 53 6e-07
173SPAR_BACSU (P33112) Subtilin biosynthesis regulatory protein spaR 53 6e-07
174LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ... 53 6e-07
175CHEY_LISMO (P0A4H5) Chemotaxis protein cheY 53 6e-07
176CHEY_LISIN (P0A4H6) Chemotaxis protein cheY 53 6e-07
177NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein 53 6e-07
178SP0A_MOOTA (P52941) Stage 0 sporulation protein A homolog 53 8e-07
179CHEY_THEMA (Q56312) Chemotaxis protein cheY 53 8e-07
180SP0A_CLOPA (P52940) Stage 0 sporulation protein A homolog 53 8e-07
181RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3) 53 8e-07
182PILR_PSEAE (Q00934) Type 4 fimbriae expression regulatory protei... 53 8e-07
183MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase m... 52 1e-06
184CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog 52 1e-06
185RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3) 52 1e-06
186CSSR_BACSU (O32192) Transcriptional regulatory protein cssR 52 1e-06
187BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC ... 52 1e-06
188BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC ... 52 1e-06
189NTRC_ECOLI (P0AFB8) Nitrogen regulation protein NR(I) 52 1e-06
190NTRC_ECO57 (P0AFB9) Nitrogen regulation protein NR(I) 52 1e-06
191LUXO_VIBPA (Q87MX7) Regulatory protein luxO 52 1e-06
192LUXO_VIBHA (P54299) Luminescence regulatory protein luxO 52 1e-06
193HNR_SHIFL (P0AEV3) Protein hnr 52 1e-06
194HNR_ECOLI (P0AEV1) Protein hnr 52 1e-06
195HNR_ECO57 (P0AEV2) Protein hnr 52 1e-06
196SP0A_BACSU (P06534) Stage 0 sporulation protein A 52 1e-06
197LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN... 52 1e-06
198LUXO1_VIBCH (Q9KT84) Regulatory protein luxO 52 2e-06
199NTRC_PROVU (P28787) Nitrogen regulation protein NR(I) 52 2e-06
200VRAR_STAHJ (Q4L7J5) Response regulator protein vraR 52 2e-06
201CHEY_YEREN (Q93P00) Chemotaxis protein cheY 52 2e-06
202PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response re... 52 2e-06
203VRAR_STAS1 (Q49YS9) Response regulator protein vraR 51 2e-06
204SP0A_BACME (P52932) Stage 0 sporulation protein A (Fragment) 51 2e-06
205PMRA_PECCC (Q70FH0) Transcriptional regulatory protein pmrA 51 2e-06
206BASR_SALTY (P36556) Transcriptional regulatory protein basR/pmrA 51 2e-06
207TRPO_PSEAE (P24908) Putative transcriptional regulator 51 3e-06
208SP0A_BREPA (P52929) Stage 0 sporulation protein A (Fragment) 51 3e-06
209RSTA_ECOLI (P52108) Transcriptional regulatory protein rstA 51 3e-06
210CHEY_SALTY (P0A2D5) Chemotaxis protein cheY 51 3e-06
211CHEY_SALTI (P0A2D6) Chemotaxis protein cheY 51 3e-06
212CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY 51 3e-06
213SP0A_CLOAB (P58253) Stage 0 sporulation protein A homolog 51 3e-06
214SP0A_CLOBE (P52936) Stage 0 sporulation protein A homolog (Fragm... 51 3e-06
215CHEB_RHILO (Q98PD1) Chemotaxis response regulator protein-glutam... 51 3e-06
216CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY 50 4e-06
217CHEY_SHIFL (P0AE69) Chemotaxis protein cheY 50 4e-06
218CHEY_ECOLI (P0AE67) Chemotaxis protein cheY 50 4e-06
219CHEY_ECO57 (P0AE68) Chemotaxis protein cheY 50 4e-06
220ARCA_HAEIN (P44918) Aerobic respiration control protein arcA hom... 50 4e-06
221CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog 50 5e-06
222CCDB_BACSU (P45709) Protein ccdB 50 5e-06
223CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY 50 5e-06
224VANR_ENTFC (Q06239) Regulatory protein vanR 50 5e-06
225CHEB_DESPS (Q6AJV3) Chemotaxis response regulator protein-glutam... 50 5e-06
226RCP1_SYNY3 (Q55169) Response regulator rcp1 50 7e-06
227CHEY_HELPY (P71403) Chemotaxis protein cheY homolog 49 9e-06
228LIAR_BACSU (O32197) Sensory transduction protein liaR 49 1e-05
229SP0A_BACST (P52934) Stage 0 sporulation protein A 49 1e-05
230CHEB_VIBF1 (Q5E3S1) Chemotaxis response regulator protein-glutam... 49 1e-05
231RSSB_SERMA (Q8GP20) Swarming motility regulation protein rssB 49 2e-05
232SP0F_BACTK (P52942) Sporulation initiation phosphotransferase F ... 49 2e-05
233GACA_PSEU2 (Q52376) Response regulator gacA (Global activator) 49 2e-05
234NTRC_SALTY (P41789) Nitrogen regulation protein NR(I) 49 2e-05
235ARCA_SHIFL (P0A9Q4) Aerobic respiration control protein arcA 48 2e-05
236ARCA_ECOLI (P0A9Q1) Aerobic respiration control protein arcA (Dy... 48 2e-05
237ARCA_ECOL6 (P0A9Q2) Aerobic respiration control protein arcA 48 2e-05
238ARCA_ECO57 (P0A9Q3) Aerobic respiration control protein arcA 48 2e-05
239RPFG_XANC8 (Q4UU85) Response regulator rpfG 48 2e-05
240CHEB_SYMTH (Q67P67) Chemotaxis response regulator protein-glutam... 48 3e-05
241DCTR_BACSU (P96602) Probable C4-dicarboxylate response regulator... 48 3e-05
242ACTR_RHIME (Q52913) Acid tolerance regulatory protein actR 48 3e-05
243GACA_PSEVI (P95582) Response regulator gacA (Global activator) 47 4e-05
244GACA_PSEAE (Q51373) Response regulator gacA (Global activator) 47 4e-05
245CHEV_BACSU (P37599) Chemotaxis protein cheV 47 4e-05
246SP0A_BACCI (P52931) Stage 0 sporulation protein A (Fragment) 47 5e-05
247CHEB1_RALEJ (Q46V28) Chemotaxis response regulator protein-gluta... 47 5e-05
248CHEB1_VIBVY (Q7MIQ5) Chemotaxis response regulator protein-gluta... 47 5e-05
249CHEB1_VIBVU (Q8DB67) Chemotaxis response regulator protein-gluta... 47 5e-05
250CHEB3_PSESM (Q886S8) Chemotaxis response regulator protein-gluta... 47 5e-05
251CHEB3_PSE14 (Q48F23) Chemotaxis response regulator protein-gluta... 47 6e-05
252DCTR_BACHD (Q9K998) Probable C4-dicarboxylate response regulator... 46 8e-05
253CHEB1_DESDG (Q311M8) Chemotaxis response regulator protein-gluta... 46 8e-05
254YDFI_BACSU (P96686) Sensory transduction protein ydfI 46 8e-05
255CHEB2_PSEU2 (Q4ZWW3) Chemotaxis response regulator protein-gluta... 46 8e-05
256BASR_ECOLI (P30843) Transcriptional regulatory protein basR/pmrA 46 1e-04
257CHEB1_GEOSL (P62638) Chemotaxis response regulator protein-gluta... 46 1e-04
258NARP_ECOLI (P31802) Nitrate/nitrite response regulator protein narP 46 1e-04
259YPH5_THIVI (P45365) Hypothetical 76.5 kDa protein in phbC 3'regi... 46 1e-04
260CHEB3_PSEPK (Q88MS5) Chemotaxis response regulator protein-gluta... 46 1e-04
261CHEB1_PSEPF (Q3KHF6) Chemotaxis response regulator protein-gluta... 46 1e-04
262CHEB_METMP (P62647) Chemotaxis response regulator protein-glutam... 46 1e-04
263FIXJ_BRAJA (P23221) Transcriptional regulatory protein fixJ 45 1e-04
264CHEB1_VIBPA (Q87MK5) Chemotaxis response regulator protein-gluta... 45 1e-04
265CHEB1_VIBCH (Q9KQD8) Chemotaxis response regulator protein-gluta... 45 1e-04
266ARR10_ARATH (O49397) Two-component response regulator ARR10 (Rec... 45 1e-04
267CHEB2_BURS3 (Q393F2) Chemotaxis response regulator protein-gluta... 45 2e-04
268APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1... 45 2e-04
269DEGU_BREBE (P54662) Transcriptional regulatory protein degU 45 2e-04
270CHEB1_PSEF5 (Q4KHL8) Chemotaxis response regulator protein-gluta... 45 2e-04
271CHEB2_RHOCE (P72253) Chemotaxis response regulator protein-gluta... 45 2e-04
272CHEB1_PSEAE (O87125) Chemotaxis response regulator protein-gluta... 45 2e-04
273CHEB2_CHRVO (Q7NZB3) Chemotaxis response regulator protein-gluta... 45 2e-04
274ARR21_ARATH (Q9LYP5) Putative two-component response regulator A... 45 2e-04
275CHEB2_CAUCR (Q9AAK0) Chemotaxis response regulator protein-gluta... 45 2e-04
276REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase re... 44 3e-04
277SP0A_BACSH (P42012) Stage 0 sporulation protein A 44 3e-04
278PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95... 44 3e-04
279ARR17_ARATH (Q9FPR6) Two-component response regulator ARR17 44 3e-04
280NTRC_RHOCA (P09432) Nitrogen regulation protein ntrC 44 3e-04
281NTRX_AZOCA (Q04849) Nitrogen assimilation regulatory protein ntrX 44 3e-04
282PATA_ANASP (P39048) Protein patA (PAT-1) 44 3e-04
283ARR12_ARATH (P62598) Two-component response regulator ARR12 44 4e-04
284ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1) 44 4e-04
285ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm... 44 4e-04
286CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-gluta... 44 4e-04
287ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7 44 4e-04
288Y0G0_VIBCH (Q9KL96) Hypothetical response regulatory protein VCA... 44 4e-04
289REGA_RHOSU (O82868) Photosynthetic apparatus regulatory protein ... 44 5e-04
290Y2151_LEPIN (P24086) Hypothetical protein LA_2151 (ORF 2) 44 5e-04
291Y1769_LEPIC (Q72RH6) Hypothetical protein LIC_11769 44 5e-04
292UVRY_SHIFL (P0AED6) Response regulator uvrY 44 5e-04
293UVRY_ECOLI (P0AED5) Response regulator uvrY 44 5e-04
294UVRY_ECOL6 (P66797) Response regulator uvrY 44 5e-04
295UVRY_ECO57 (P66798) Response regulator uvrY 44 5e-04
296REGA_RHOCA (P42508) Photosynthetic apparatus regulatory protein ... 44 5e-04
297ALGB_PSESM (Q88AQ2) Alginate biosynthesis transcriptional regula... 44 5e-04
298ALGB_PSEPK (Q88RJ6) Alginate biosynthesis transcriptional regula... 44 5e-04
299CHEB3_VIBCH (Q9KS59) Chemotaxis response regulator protein-gluta... 44 5e-04
300MAK3_SCHPO (O74539) Peroxide stress-activated histidine kinase m... 44 5e-04
301CHEB_COLP3 (Q485K0) Chemotaxis response regulator protein-glutam... 43 7e-04
302CHEB_BACLD (Q65JK6) Chemotaxis response regulator protein-glutam... 43 7e-04
303ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.13.3) (NT-ETR1) 43 7e-04
304CHEB2_AZOBR (Q8VL08) Chemotaxis response regulator protein-gluta... 43 9e-04
305CHEB2_BURPS (Q63J47) Chemotaxis response regulator protein-gluta... 43 9e-04
306CHEB2_BURP1 (Q3JJY2) Chemotaxis response regulator protein-gluta... 43 9e-04
307CHEB2_BURMA (Q4V2X4) Chemotaxis response regulator protein-gluta... 43 9e-04
308ARR1_ARATH (Q940D0) Two-component response regulator ARR1 43 9e-04
309NARL_SHIFL (P0AF31) Nitrate/nitrite response regulator protein narL 43 9e-04
310NARL_ECOLI (P0AF28) Nitrate/nitrite response regulator protein narL 43 9e-04
311NARL_ECOL6 (P0AF29) Nitrate/nitrite response regulator protein narL 43 9e-04
312NARL_ECO57 (P0AF30) Nitrate/nitrite response regulator protein narL 43 9e-04
313ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3 43 9e-04
314CHEB2_DESVH (P62637) Chemotaxis response regulator protein-gluta... 42 0.001
315GACA_PSEFL (P32967) Response regulator gacA (Global activator) (... 42 0.001
316ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Rec... 42 0.001
317CHEB2_XANOR (Q5GYV8) Chemotaxis response regulator protein-gluta... 42 0.001
318CHEB2_XANC8 (Q4UU97) Chemotaxis response regulator protein-gluta... 42 0.001
319CHEB1_XANCP (Q8P9J7) Chemotaxis response regulator protein-gluta... 42 0.001
320CHEB1_XANC5 (Q3BUA2) Chemotaxis response regulator protein-gluta... 42 0.001
321CHEB1_XANAC (Q8PLB4) Chemotaxis response regulator protein-gluta... 42 0.001
322DCTD_RHIME (P13632) C4-dicarboxylate transport transcriptional r... 42 0.001
323CHEB1_METMA (Q8Q009) Chemotaxis response regulator protein-gluta... 42 0.001
324ARR4_ARATH (O82798) Two-component response regulator ARR4 (Respo... 42 0.001
325ARR15_ARATH (Q7G8V2) Two-component response regulator ARR15 42 0.001
326CHEB1_PSEPK (Q88EW5) Chemotaxis response regulator protein-gluta... 42 0.002
327CHEB1_BURS3 (Q394I6) Chemotaxis response regulator protein-gluta... 42 0.002
328CHEB_THEMA (Q9WYN9) Chemotaxis response regulator protein-glutam... 41 0.003
329CHEB_BACSU (Q05522) Chemotaxis response regulator protein-glutam... 41 0.003
330NTRC_RHIME (P10577) Nitrogen assimilation regulatory protein 41 0.003
331ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6 41 0.003
332CHEB2_PSEF5 (Q4KG36) Chemotaxis response regulator protein-gluta... 41 0.003
333CHEB1_PSEPU (O52262) Chemotaxis response regulator protein-gluta... 41 0.003
334ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18 41 0.003
335ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Respo... 41 0.003
336CHEB2_CARHZ (Q3ADA6) Chemotaxis response regulator protein-gluta... 41 0.003
337CHEB2_PSEPF (Q3KFZ6) Chemotaxis response regulator protein-gluta... 41 0.003
338APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9... 40 0.004
339DEGU_BACSU (P13800) Transcriptional regulatory protein degU (Pro... 40 0.004
340CHEB_IDILO (Q5QZQ3) Chemotaxis response regulator protein-glutam... 40 0.004
341MALR_BACSU (O05251) Transcriptional regulatory protein malR (Mal... 40 0.004
342CHEB_NITWN (Q3SVA1) Chemotaxis response regulator protein-glutam... 40 0.006
343REGA_RHOS4 (Q53228) Photosynthetic apparatus regulatory protein ... 40 0.006
344ETR1_PASED (Q9ZWL6) Ethylene receptor (EC 2.7.13.3) (PE-ETR1) 40 0.006
345DCTD_RHILE (P10046) C4-dicarboxylate transport transcriptional r... 40 0.006
346CHEB_PYRKO (Q5JF95) Chemotaxis response regulator protein-glutam... 40 0.006
347ETR1_MALDO (O81122) Ethylene receptor (EC 2.7.13.3) 40 0.007
348ALGB_PSEAE (P23747) Alginate biosynthesis transcriptional regula... 40 0.007
349YXJL_BACSU (P55184) Hypothetical sensory transduction protein yxjL 40 0.007
350ARR16_ARATH (Q9SHC2) Two-component response regulator ARR16 40 0.007
351FIXJ_RHIME (P10958) Transcriptional regulatory protein fixJ 40 0.007
352ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14 40 0.007
353APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3... 40 0.007
354BVGA_BORPE (P0A4H2) Virulence factors putative positive transcri... 40 0.007
355BVGA_BORPA (P0A4H4) Virulence factors putative positive transcri... 40 0.007
356BVGA_BORBR (P0A4H3) Virulence factors putative positive transcri... 40 0.007
357ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Recei... 40 0.007
358CHEB_PSEHT (Q3IDZ3) Chemotaxis response regulator protein-glutam... 40 0.007
359APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5... 40 0.007
360CHEB2_PHOPR (Q6LTM2) Chemotaxis response regulator protein-gluta... 40 0.007
361CHEB3_SHEON (Q8EEQ0) Chemotaxis response regulator protein-gluta... 40 0.007
362CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-gluta... 39 0.010
363CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-gluta... 39 0.010
364PGTA_SALTY (P06184) Phosphoglycerate transport system transcript... 39 0.010
365CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-gluta... 39 0.010
366CHEB_BACHD (Q9KA55) Chemotaxis response regulator protein-glutam... 39 0.010
367CHEB_TREPA (O83639) Chemotaxis response regulator protein-glutam... 39 0.010
368ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.13.3) (LeETR2) 39 0.013
369Y8J3_VIBVU (Q8D4U6) Hypothetical response regulatory protein VV2... 39 0.013
370CHEB2_RHOPA (P62644) Chemotaxis response regulator protein-gluta... 39 0.013
371CHEB1_LEPIN (Q8F6P9) Chemotaxis response regulator protein-gluta... 39 0.013
372CHEB1_LEPIC (P62641) Chemotaxis response regulator protein-gluta... 39 0.013
373NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein 39 0.016
374CHEB_OCEIH (Q8EQW0) Chemotaxis response regulator protein-glutam... 39 0.016
375CHEB3_RHOSH (O33558) Chemotaxis response regulator protein-gluta... 38 0.021
376PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1 (... 38 0.021
377ETR1_PRUPE (Q9M7M1) Ethylene receptor (EC 2.7.13.3) 38 0.021
378Y4XI_RHISN (P55701) Probable transcriptional regulatory protein ... 38 0.028
379CHEB1_RHOS4 (Q3J653) Chemotaxis response regulator protein-gluta... 38 0.028
380CHEB3_GEOSL (P62640) Chemotaxis response regulator protein-gluta... 37 0.037
381CHEB2_BRAJA (Q89T55) Chemotaxis response regulator protein-gluta... 37 0.037
382FIMZ_SALTY (P26319) Fimbriae Z protein 37 0.037
383CHEB1_METAC (Q8TLG9) Chemotaxis response regulator protein-gluta... 37 0.037
384CHEB2_RHOS4 (Q3J1W3) Chemotaxis response regulator protein-gluta... 37 0.037
385CHEB1_DECAR (Q47I43) Chemotaxis response regulator protein-gluta... 37 0.037
386CHEB_THETN (Q8RAZ3) Chemotaxis response regulator protein-glutam... 37 0.037
387Y4021_VIBPA (Q87K77) Hypothetical response regulatory protein VP... 37 0.037
388CHEB2_XANCP (Q8P7A6) Chemotaxis response regulator protein-gluta... 37 0.037
389CHEB2_RHOSH (Q8KLS5) Chemotaxis response regulator protein-gluta... 37 0.037
390CHEB1_XANC8 (Q4UWU6) Chemotaxis response regulator protein-gluta... 37 0.037
391YCF29_GUITH (O78417) Probable transcriptional regulator ycf29 37 0.048
392ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3) 37 0.048
393PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73... 37 0.048
394CHEB3_CHRVO (Q7NSI8) Chemotaxis response regulator protein-gluta... 37 0.048
395CHEB1_XANOR (Q5H2V2) Chemotaxis response regulator protein-gluta... 37 0.048
396CHEB1_SHEON (Q8ECD7) Chemotaxis response regulator protein-gluta... 37 0.048
397CHEB_PYRAB (Q9UYF3) Chemotaxis response regulator protein-glutam... 37 0.048
398ARR22_ARATH (Q9M8Y4) Two-component response regulator ARR22 37 0.048
399NODW_BRAJA (P15940) Nodulation protein W 37 0.062
400CHEB_PYRHO (O58192) Chemotaxis response regulator protein-glutam... 37 0.062
401ARR8_ARATH (O80365) Two-component response regulator ARR8 (Respo... 37 0.062
402CHEB_TREDE (P62646) Chemotaxis response regulator protein-glutam... 36 0.081
403ARR19_ARATH (Q9M9B9) Putative two-component response regulator A... 36 0.081
404CHEB_GEOKA (Q5L0L0) Chemotaxis response regulator protein-glutam... 36 0.081
405CHEB_THIDA (Q3SIG0) Chemotaxis response regulator protein-glutam... 36 0.081
406RRF1_DESVH (P33394) Protein rrf1 36 0.081
407DCTR_RHOCA (P37740) C4-dicarboxylate transport transcriptional r... 36 0.11
408TORS_ECOLI (P39453) Sensor protein torS (EC 2.7.13.3) 36 0.11
409ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1) 36 0.11
410LYTR_STRA5 (Q8E217) Sensory transduction protein lytR 36 0.11
411LYTR_STRA3 (Q8E7H3) Sensory transduction protein lytR 36 0.11
412ARR9_ARATH (O80366) Two-component response regulator ARR9 (Respo... 35 0.14
413MOXX_PARDE (P29904) Methanol utilization control regulatory prot... 35 0.14
414CHEB_PELCD (Q3A5A8) Chemotaxis response regulator protein-glutam... 35 0.14
415CHEB2_XANC5 (Q3BR57) Chemotaxis response regulator protein-gluta... 35 0.14
416CHEB2_XANAC (Q8PIM5) Chemotaxis response regulator protein-gluta... 35 0.14
417ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2) 35 0.18
418ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3) 35 0.18
419CHEB1_CHRVO (Q7NV40) Chemotaxis response regulator protein-gluta... 35 0.18
420CHEB1_PHOPR (Q6LU34) Chemotaxis response regulator protein-gluta... 35 0.24
421PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37... 35 0.24
422APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7... 34 0.31
423CHEB2_METMA (Q8PX96) Chemotaxis response regulator protein-gluta... 34 0.31
424CHEB_RALSO (Q8XQ83) Chemotaxis response regulator protein-glutam... 34 0.31
425CHEB2_DECAR (Q47GX7) Chemotaxis response regulator protein-gluta... 34 0.31
426CHEB3_RHOPA (P62645) Chemotaxis response regulator protein-gluta... 34 0.40
427CHEB2_METAC (Q8TUQ0) Chemotaxis response regulator protein-gluta... 34 0.40
428CHEB1_CARHZ (Q3ADG9) Chemotaxis response regulator protein-gluta... 33 0.53
429YCCH_BACSU (P70955) Hypothetical sensory transduction protein yccH 33 0.53
430H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein typ... 33 0.53
431LYTR_STRMU (Q8DVB7) Sensory transduction protein lytR 33 0.53
432CHEB2_SHEON (Q8EF61) Chemotaxis response regulator protein-gluta... 33 0.53
433CHEB1_PSEU2 (Q4ZYD3) Chemotaxis response regulator protein-gluta... 33 0.53
434ARR13_ARATH (Q9ZVD3) Putative two-component response regulator A... 33 0.53
435FIMZ_ECOLI (P0AEL8) Fimbriae Z protein 33 0.69
436FIMZ_ECO57 (P0AEL9) Fimbriae Z protein 33 0.69
437MOAA_SYNPW (Q9EYN8) Molybdenum cofactor biosynthesis protein A 33 0.69
438CHEB_SHISS (Q3Z2R1) Chemotaxis response regulator protein-glutam... 33 0.90
439CHEB_SHIFL (Q83R52) Chemotaxis response regulator protein-glutam... 33 0.90
440CHEB_SHIBS (Q322K2) Chemotaxis response regulator protein-glutam... 33 0.90
441CHEB_SALTY (P04042) Chemotaxis response regulator protein-glutam... 33 0.90
442CHEB_SALTI (Q8Z5V2) Chemotaxis response regulator protein-glutam... 33 0.90
443CHEB_SALPA (Q5PMY3) Chemotaxis response regulator protein-glutam... 33 0.90
444CHEB_SALCH (Q57N81) Chemotaxis response regulator protein-glutam... 33 0.90
445CHEB_ECOLI (P07330) Chemotaxis response regulator protein-glutam... 33 0.90
446CHEB_ECOL6 (Q8FGP5) Chemotaxis response regulator protein-glutam... 33 0.90
447CHEB_ECO57 (Q8XCF9) Chemotaxis response regulator protein-glutam... 33 0.90
448CHEB3_BRAJA (Q89SQ1) Chemotaxis response regulator protein-gluta... 33 0.90
449CHEB2_PSESM (Q888V8) Chemotaxis response regulator protein-gluta... 33 0.90
450CHEB1_PSE14 (Q48ND9) Chemotaxis response regulator protein-gluta... 33 0.90
451CHEB2_VIBVU (Q8D4X6) Chemotaxis response regulator protein-gluta... 32 1.2
452CHEB_ENTCL (Q9FAD8) Chemotaxis response regulator protein-glutam... 32 1.2
453AGMR_PSEAE (P29369) Glycerol metabolism activator (Protein agmR) 32 1.2
454ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1) 32 1.2
455CHEB_CLOAB (Q97GZ3) Chemotaxis response regulator protein-glutam... 32 1.2
456CHEB2_VIBVY (Q7MBQ5) Chemotaxis response regulator protein-gluta... 32 1.2
457FIXJ_AZOCA (P26487) Transcriptional regulatory protein fixJ 32 1.5
458CHEB_PHOLL (Q7N5T1) Chemotaxis response regulator protein-glutam... 32 1.5
459CHEB_BORPE (Q7VZ94) Chemotaxis response regulator protein-glutam... 32 1.5
460CHEB_BORPA (Q7WAA4) Chemotaxis response regulator protein-glutam... 32 1.5
461CHEB_BORBR (Q7WJE7) Chemotaxis response regulator protein-glutam... 32 1.5
462CHEB1_DESVH (P62636) Chemotaxis response regulator protein-gluta... 32 1.5
463SUC4_ARATH (Q9FE59) Sucrose transport protein SUC4 (Sucrose perm... 32 2.0
464LYTT_BACAN (Q81JL3) Sensory transduction protein lytT 32 2.0
465CHEB_NITEU (Q820K0) Chemotaxis response regulator protein-glutam... 32 2.0
466CHEB2_RALEJ (Q46PH7) Chemotaxis response regulator protein-gluta... 32 2.0
467LAT_HUMAN (O43561) Linker for activation of T-cells family membe... 31 2.6
468CHEB2_PSEAE (Q9I6V9) Chemotaxis response regulator protein-gluta... 31 2.6
469CHEB1_BURPS (Q63PS2) Chemotaxis response regulator protein-gluta... 31 2.6
470CHEB_METBF (Q46DT6) Chemotaxis response regulator protein-glutam... 31 2.6
471CHEB1_BURP1 (Q3JY65) Chemotaxis response regulator protein-gluta... 31 2.6
472CHEB1_BURMA (Q62G12) Chemotaxis response regulator protein-gluta... 31 2.6
473LYTT_BACCR (Q814J1) Sensory transduction protein lytT 31 2.6
474CHEB3_BURS3 (Q39KQ1) Chemotaxis response regulator protein-gluta... 31 3.4
475AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein 31 3.4
476CHEB2_DESDG (Q30ZJ5) Chemotaxis response regulator protein-gluta... 31 3.4
477MURD_RICCN (Q92I60) UDP-N-acetylmuramoylalanine--D-glutamate lig... 30 4.5
478CHEB1_AGRT5 (O85128) Chemotaxis response regulator protein-gluta... 30 4.5
479EGR1_HUMAN (P18146) Early growth response protein 1 (EGR-1) (Kro... 30 5.8
480KRA61_RABIT (Q02957) Keratin, glycine/tyrosine-rich of hair 30 5.8
481FTSQ_CAUCR (O68326) Cell division protein ftsQ homolog 30 5.8
482HOXA_BRAJA (P31908) Hydrogenase transcriptional regulatory prote... 30 5.8
483MDR21_ARATH (Q9LSJ2) Putative multidrug resistance protein 21 (P... 30 5.8
484NAS29_CAEEL (Q20958) Zinc metalloproteinase nas-29 precursor (EC... 30 5.8
485CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-gluta... 30 7.6
486SPL7_ARATH (Q8S9G8) Squamosa promoter-binding-like protein 7 30 7.6
487TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ... 30 7.6
488NET2_HUMAN (O00634) Netrin-2-like protein precursor 30 7.6
489CITB_KLEPN (P52688) Transcriptional regulatory protein citB 29 10.0
490ALGR_PSEAE (P26275) Positive alginate biosynthesis regulatory pr... 29 10.0
491HCLS1_MOUSE (P49710) Hematopoietic lineage cell-specific protein... 29 10.0
492BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO d... 29 10.0
493PHYB_ARATH (P14713) Phytochrome B 29 10.0

>PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell|
           differentiation-controlling protein) [Includes:
           Diguanylate cyclase (EC 4.6.1.-) (DGC)]
          Length = 454

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 44/116 (37%), Positives = 70/116 (60%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D E N  +L  +LT + +EV  A DG   +  A R+ PD+IL+D+ +P MDG+ 
Sbjct: 4   RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFT 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
             R+LK DP  +  PV+ +TA     DR + + +G  D+ TKPI+   L +++  L
Sbjct: 64  VCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSL 119



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 29/124 (23%), Positives = 60/124 (48%)
 Frame = -2

Query: 604 GLGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 425
           GLG  ++L+V+DNE     ++  L  +   V+ +    A +        DL++++ +   
Sbjct: 151 GLG-GRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAGG--PVDLVIVNAAAKN 207

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
            DG   T  L+++   +Q PV+A+          KA+  G +D  ++PI+   L +++  
Sbjct: 208 FDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKT 267

Query: 244 LLER 233
            ++R
Sbjct: 268 QIQR 271



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>PILH_PSEAE (P43501) Protein pilH|
          Length = 121

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 45/119 (37%), Positives = 70/119 (58%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M +IL+V+D+      L+  L + G +V+ A +G  GV  AR+E+PD++LMD+ +P ++G
Sbjct: 1   MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
           ++ATRQL  D E    PVI +T     +D+      G  DY TKP++   LL  I  +L
Sbjct: 61  FQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVL 119



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>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC|
            2.7.13.3)
          Length = 918

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 50/113 (44%), Positives = 64/113 (56%)
 Frame = -2

Query: 601  LGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVM 422
            L MT ++ V+DN  N  ++   L      V L   G   V+ A++   DLILMD+ +P M
Sbjct: 666  LAMT-VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDM 724

Query: 421  DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            DG  A   +   P  QQTPVIA+TAHAMA  +EK + AG  DY  KPIE  RL
Sbjct: 725  DGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERL 777



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>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC|
            2.7.13.3)
          Length = 918

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 50/113 (44%), Positives = 64/113 (56%)
 Frame = -2

Query: 601  LGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVM 422
            L MT ++ V+DN  N  ++   L      V L   G   V+ A++   DLILMD+ +P M
Sbjct: 666  LAMT-VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDM 724

Query: 421  DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            DG  A   +   P  QQTPVIA+TAHAMA  +EK + AG  DY  KPIE  RL
Sbjct: 725  DGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERL 777



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>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC|
            2.7.13.3)
          Length = 918

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 50/113 (44%), Positives = 64/113 (56%)
 Frame = -2

Query: 601  LGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVM 422
            L MT ++ V+DN  N  ++   L      V L   G   V+ A++   DLILMD+ +P M
Sbjct: 666  LAMT-VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDM 724

Query: 421  DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            DG  A   +   P  QQTPVIA+TAHAMA  +EK + AG  DY  KPIE  RL
Sbjct: 725  DGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERL 777



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>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)|
          Length = 907

 Score = 82.8 bits (203), Expect = 8e-16
 Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L V+DN  N  ++   L   G EVV    G A V+  ++E  DL+LMD+ +P MDG +
Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQEAFDLVLMDVQMPGMDGRQ 717

Query: 409 ATRQLKA-DPELQQT--PVIALTAHAMASDREKAIAAGCDDYDTKPI 278
           AT  ++A + E  Q+  P++ALTAHAMA+++   + +G DDY TKPI
Sbjct: 718 ATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPI 764



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>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC|
            2.7.13.3)
          Length = 918

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 49/113 (43%), Positives = 64/113 (56%)
 Frame = -2

Query: 601  LGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVM 422
            L MT ++ V+DN  N  ++   L      V L   G   V+ A++   DLILMD+ +P M
Sbjct: 666  LAMT-VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDM 724

Query: 421  DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            DG  A   +   P  +QTPVIA+TAHAMA  +EK + AG  DY  KPIE  RL
Sbjct: 725  DGIRACELIHQLPHQRQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERL 777



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>PRRA_MYCTU (P0A5Z6) Transcriptional regulatory protein prrA|
          Length = 233

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 45/124 (36%), Positives = 68/124 (54%)
 Frame = -2

Query: 604 GLGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 425
           G+   ++L+V+D+ D    L R L   GFEV  A DGA  + +A   +PD I++D+++PV
Sbjct: 4   GVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPV 63

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
           +DG      L+A       PV  L+A +   DR   + AG DDY  KP  L  L++++  
Sbjct: 64  LDGVSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKA 121

Query: 244 LLER 233
           LL R
Sbjct: 122 LLRR 125



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>PRRA_MYCBO (P0A5Z7) Transcriptional regulatory protein prrA|
          Length = 233

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 45/124 (36%), Positives = 68/124 (54%)
 Frame = -2

Query: 604 GLGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 425
           G+   ++L+V+D+ D    L R L   GFEV  A DGA  + +A   +PD I++D+++PV
Sbjct: 4   GVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPV 63

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
           +DG      L+A       PV  L+A +   DR   + AG DDY  KP  L  L++++  
Sbjct: 64  LDGVSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKA 121

Query: 244 LLER 233
           LL R
Sbjct: 122 LLRR 125



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>YYCF_BACSU (P37478) Transcriptional regulatory protein yycF|
          Length = 235

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 46/119 (38%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D +   D+L   L ++G+EV  AHDG   V+     QPDLIL+D+ LP  DG E
Sbjct: 4   KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVE 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+++   ++   P+I LTA     D+   +  G DDY TKP     LL+++   L R
Sbjct: 64  VCREVRKKYDM---PIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRR 119



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>PRRA_MYCLE (Q50136) Transcriptional regulatory protein prrA|
          Length = 233

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 45/124 (36%), Positives = 67/124 (54%)
 Frame = -2

Query: 604 GLGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPV 425
           G+   ++L+V+D+ D    L R L   GFEV  A DGA  +  A   +PD I++D+++PV
Sbjct: 4   GVSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDINMPV 63

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
           +DG      L+A       PV  L+A +   DR   + AG DDY  KP  L  L++++  
Sbjct: 64  LDGVSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKA 121

Query: 244 LLER 233
           LL R
Sbjct: 122 LLRR 125



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>ARLR_STAAW (P0C001) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAU (Q9KJN4) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAS (Q6G9E6) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAR (Q6GGZ3) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAM (P0C000) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAC (Q5HG04) Response regulator arlR|
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>ARLR_STAAN (Q99U73) Response regulator arlR|
          Length = 214

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/121 (35%), Positives = 70/121 (57%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT+IL+VED ++    L   LT + + V   +DG  G+D A     DLI++D+ LP ++G
Sbjct: 1   MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSING 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+++   + Q TP+I +TA +   D+   +  G DDY  KP ++  LL++I  +L 
Sbjct: 61  LEICRKIR---QQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>YXDJ_BACSU (P42421) Sensory transduction protein yxdJ|
          Length = 229

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 44/121 (36%), Positives = 72/121 (59%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KI++VED+ED   +L   L + G++ V+A D  A +D   RE+PD++L+D++LP  DG
Sbjct: 1   MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +   RQ++   +   +P+I ++A +   D+  AI  G DDY  KP     +L+KI   + 
Sbjct: 61  YYWCRQIR---QHSTSPIIFISARSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 227

 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 43/121 (35%), Positives = 65/121 (53%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           + KI +VED E    +L   L  +GFEV     G       +   PDL+++D  LP + G
Sbjct: 2   LPKIAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQERLPDLLILDWMLPGVSG 61

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+L+  PE ++ P+I LTA    S+R + +A G DDY  KP   P L++++  +L 
Sbjct: 62  IELCRRLRQRPETERLPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLR 121

Query: 235 R 233
           R
Sbjct: 122 R 122



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>YEDW_ECOLI (P76340) Probable transcriptional regulatory protein yedW|
          Length = 223

 Score = 79.3 bits (194), Expect = 8e-15
 Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KILL+EDN+   + +++ L+  G+ +    DG  G+  A ++   LI++D+ LP MDGW+
Sbjct: 2   KILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQ 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI-AQL 242
             + L+     +QTPVI LTA     DR + + +G +DY  KP     LL+++ AQL
Sbjct: 62  ILQTLRT---AKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQL 115



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>IRLR_BURPS (O31395) Transcriptional activator protein irlR|
          Length = 229

 Score = 79.3 bits (194), Expect = 8e-15
 Identities = 43/119 (36%), Positives = 61/119 (51%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED       L + LT  GF      DG  G+  A  E+ DLI++D+ LP  DGW 
Sbjct: 2   RILIVEDEPKTGMYLRKGLTEAGFIADWVEDGVTGLHQAETEEYDLIILDVMLPGHDGWT 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+       TPV+ LTA     DR K +  G DDY  KP +   L++++  +L R
Sbjct: 62  VLERLR---RAHSTPVLFLTARDDVGDRVKGLELGADDYVVKPFDFVELVARVRSILRR 117



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>PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR|
          Length = 226

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 41/121 (33%), Positives = 67/121 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M +IL+VED +     L + L  +G++  L ++G  G+  A + Q DLI++D+ LP +DG
Sbjct: 1   MQRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           W+    L+      + PV+ LTA     D+ K +  G DDY  KP +   L++++  LL 
Sbjct: 61  WQIISALRESG--HEEPVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLR 118

Query: 235 R 233
           R
Sbjct: 119 R 119



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>COPR_PSESM (Q02540) Transcriptional activator protein copR|
          Length = 227

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/119 (37%), Positives = 61/119 (51%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+L+ ED       L + L   GF V     G   VD A  E  DL+++D+ +P +DGWE
Sbjct: 2   KLLVAEDEPKTGIYLQQGLREAGFNVDRVVTGTDAVDQALNEAYDLLILDVMMPGLDGWE 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L+     Q  PV+ LTA     DR K +  G DDY  KP  L  LL+++  LL R
Sbjct: 62  VIRRLRTAG--QPVPVLFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLLRR 118



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>PHOP_BACSU (P13792) Alkaline phosphatase synthesis transcriptional regulatory|
           protein phoP
          Length = 240

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 42/119 (35%), Positives = 66/119 (55%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D E    +L   L R G++V+ A DG   +  A  E+PDLI++D+ LP +DG E
Sbjct: 4   KILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIE 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             +QL+   +    P++ LTA     D+   +  G DDY TKP     + +++  +L R
Sbjct: 64  VCKQLR--QQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR 120



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>REGX3_MYCSM (Q9F868) Sensory transduction protein regX3|
          Length = 228

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 43/121 (35%), Positives = 65/121 (53%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT +L+VED E   D L+  L ++GFE  +  DG + +    R   D++L+D+ LP M G
Sbjct: 1   MTSVLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +  +QL+A       PVI +TA     D+   +  G DDY TKP     L+++I  +L 
Sbjct: 61  TDVCKQLRA---RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>REGX3_MYCTU (Q11156) Sensory transduction protein regX3|
          Length = 227

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT +L+VED E   D L+  L ++GFE  +  DG A +    R   D++L+D+ LP M G
Sbjct: 1   MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +  +QL+A       PVI +TA     D+   +  G DDY TKP     L+++I  +L 
Sbjct: 61  TDVCKQLRA---RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>REGX3_MYCBO (O07130) Sensory transduction protein regX3|
          Length = 227

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT +L+VED E   D L+  L ++GFE  +  DG A +    R   D++L+D+ LP M G
Sbjct: 1   MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +  +QL+A       PVI +TA     D+   +  G DDY TKP     L+++I  +L 
Sbjct: 61  TDVCKQLRA---RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>CZCR_RALME (Q44006) Transcriptional activator protein czcR|
          Length = 225

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 41/119 (34%), Positives = 66/119 (55%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VED     + L + L+  GF V +A++G  G+  A     D+I++D+ LP MDGW 
Sbjct: 2   RVLVVEDEPRTAEYLQKGLSESGFVVDIANNGGDGLHMAEETDYDVIILDVMLPGMDGWT 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + +++  E   TPV+ LTA    +DR +    G DDY  KP     LL++I + L +
Sbjct: 62  VIKSIRSKSE---TPVLFLTALDDVADRVRGFELGADDYLVKPFAFAELLARIRRCLRQ 117



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>CPXR_SHIFL (P0AE90) Transcriptional regulatory protein cpxR|
          Length = 232

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 49/127 (38%), Positives = 70/127 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KILLV+D+ +   +L   L  +GF V++AHDG   +D    +  DL+L+D+ +P  +G
Sbjct: 1   MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +    LKA  +  QTPVI LTA     DR   +  G DDY  KP     L+++I  +L 
Sbjct: 60  IDT---LKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116

Query: 235 R*SHRRE 215
           R SH  E
Sbjct: 117 R-SHWSE 122



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>CPXR_ECOLI (P0AE88) Transcriptional regulatory protein cpxR|
          Length = 232

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 49/127 (38%), Positives = 70/127 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KILLV+D+ +   +L   L  +GF V++AHDG   +D    +  DL+L+D+ +P  +G
Sbjct: 1   MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +    LKA  +  QTPVI LTA     DR   +  G DDY  KP     L+++I  +L 
Sbjct: 60  IDT---LKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116

Query: 235 R*SHRRE 215
           R SH  E
Sbjct: 117 R-SHWSE 122



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>CPXR_ECO57 (P0AE89) Transcriptional regulatory protein cpxR|
          Length = 232

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 49/127 (38%), Positives = 70/127 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KILLV+D+ +   +L   L  +GF V++AHDG   +D    +  DL+L+D+ +P  +G
Sbjct: 1   MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLD-DSIDLLLLDVMMPKKNG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +    LKA  +  QTPVI LTA     DR   +  G DDY  KP     L+++I  +L 
Sbjct: 60  IDT---LKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116

Query: 235 R*SHRRE 215
           R SH  E
Sbjct: 117 R-SHWSE 122



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>YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG|
          Length = 228

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 44/118 (37%), Positives = 64/118 (54%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+VED E    +L   L  +G+ V + H+G  G+D A      L+L+D+ LP + G E 
Sbjct: 6   ILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAAAEGGYSLVLLDVMLPGLSGLEV 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+L+      QTPVI LTA     D+   +  G +DY TKP E+  LL++I   L +
Sbjct: 66  LRRLRKTD--SQTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEELLARIRAALRQ 121



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>CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 43/119 (36%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+L+VED +   + L++ LT  GF V LA +G  G   A     DLI++D+ LP ++GW+
Sbjct: 2   KLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L++    +  P++ LTA      R K +  G DDY  KP     LL+++  LL R
Sbjct: 62  IVRMLRS--ANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118



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>CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 43/119 (36%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+L+VED +   + L++ LT  GF V LA +G  G   A     DLI++D+ LP ++GW+
Sbjct: 2   KLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L++    +  P++ LTA      R K +  G DDY  KP     LL+++  LL R
Sbjct: 62  IVRMLRS--ANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118



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>CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 43/119 (36%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+L+VED +   + L++ LT  GF V LA +G  G   A     DLI++D+ LP ++GW+
Sbjct: 2   KLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L++    +  P++ LTA      R K +  G DDY  KP     LL+++  LL R
Sbjct: 62  IVRMLRS--ANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118



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>YSO1_PLEBO (P51586) Hypothetical 14.6 kDa protein in sodA1 3'region (ORF131)|
          Length = 131

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 41/119 (34%), Positives = 69/119 (57%)
 Frame = -2

Query: 601 LGMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVM 422
           L    IL+V+D+ D  D+L   L  +G  V +A +    +    RE P L++ D+++P M
Sbjct: 4   LAQMDILVVDDDPDTRDLLRFMLEDEGAIVTVAPNAKEALSLLERELPKLLVSDVAMPEM 63

Query: 421 DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
           DG+E   +++  P+ +  P IALTA+A   DR+ A+ +G +DY TKP++   L+  + Q
Sbjct: 64  DGFELIGRVRELPKGETLPAIALTAYAREEDRQAALRSGFNDYLTKPVDPLELIRLVQQ 122



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>SILR_SALTY (Q9ZHD3) Probable transcriptional regulatory protein silR|
          Length = 228

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 44/119 (36%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+VED+    + LS+ LT  GF V  A +G  G   A   + DL+++D+ LP ++GW+
Sbjct: 2   KILIVEDDIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L++    +  PV+ LTA      R K +  G DDY  KP     LL+++  LL R
Sbjct: 62  IIRMLRSAG--KGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118



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>YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 240

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 39/119 (32%), Positives = 69/119 (57%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+++D      +L  RL+  G++V+ A DG   +   +RE P+L+++D+ +P +DG+ 
Sbjct: 5   KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFKREHPNLVVLDLMMPKLDGYG 64

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++L+ + ++   P+I LTA +  SDR   +  G DDY  KP     L ++I  +L R
Sbjct: 65  VCQELRKESDV---PIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRR 120



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>YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ|
          Length = 227

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 43/119 (36%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL++EDN     M      ++GFE    HDG  G      E  DLI++D+ LP MDG  
Sbjct: 2   KILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQRFTEENWDLIILDIMLPSMDGVT 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+++   E    P+I LTA    SD+      G DDY TKP     L+++I  ++ R
Sbjct: 62  ICRKIR---ETSTVPIIMLTAKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVIRR 117



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>YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 254

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 38/119 (31%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+L+V+D      +L  RL+  G+ VV A DG   ++   +E PD++++D+ +P +DG+ 
Sbjct: 16  KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMPDVVILDIMMPKLDGYG 75

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++++ D ++   P+I LTA    +DR   +  G DDY  KP     L ++I  +L R
Sbjct: 76  VCQEIRKDSDV---PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131



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>TCTD_SALTY (P22104) Transcriptional regulatory protein tctD|
          Length = 224

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 43/119 (36%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++LL EDN +    L + L + GF V    DG A       E   L ++D+++P MDG E
Sbjct: 2   RLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSEMYALAVLDINMPGMDGLE 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++L+     Q  PV+ LTA +  +DR K +  G DDY  KP EL  L +++  LL R
Sbjct: 62  VVQRLRKRG--QTLPVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALLRR 118



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>YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 239

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 41/119 (34%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D      +L  RL+  G+EVV A DG   +   + E P+L+++D+ +P +DG+ 
Sbjct: 7   KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHPNLVVLDVMMPKLDGYG 66

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++L+ + ++   P+I LTA    +DR   +  G DDY  KP     L ++I  LL R
Sbjct: 67  VCQELRKESDI---PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122



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>PFER_PSEAE (Q04803) Transcriptional activator protein pfeR|
          Length = 305

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 43/119 (36%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++LLVED+    + L     R+GF V +  DG+ G++ A RE  DL+L+D+ LP +DG  
Sbjct: 79  RLLLVEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAAGREAFDLVLLDIMLPGLDGLA 138

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
               L+ +   Q TPV+ ++A     DR      G DDY  KP  L  L ++   LL R
Sbjct: 139 LLESLRRE---QATPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARTDALLRR 194



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>AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1|
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 43/121 (35%), Positives = 67/121 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  +LL+ED++     L   LTR+G  V  A  G  G+   R ++PDLI++D+ LP +DG
Sbjct: 1   MPSLLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQRPDLIVLDVMLPGIDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +E  R+++      Q P+I LTA     D    + +G DDY  KP++   L ++I  +L 
Sbjct: 61  FEVCRRIR---RTDQLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>YRKP_BACSU (P54443) Hypothetical sensory transduction protein yrkP|
          Length = 231

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 40/119 (33%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED+ED  D+L   LTR G+EV+ A DG   +     +  DL+++D+ +P + G E
Sbjct: 4   RILVVEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLV-NDSLDLVILDIMMPGISGIE 62

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + ++   +    P++ LTA +   D+ + + AG DDY TKP     L +++   L R
Sbjct: 63  TCQHIR---KSSNVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEELHARVIAQLRR 118



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>YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 243

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 40/119 (33%), Positives = 66/119 (55%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D      +L  RLT  G+EV+ A +G   +   R+E P L+++D+ +P +DG+ 
Sbjct: 7   KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFRKEYPSLVVLDVMMPKLDGYG 66

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++L+ + ++   P+I LTA     DR   +  G DDY  KP     L ++I  +L R
Sbjct: 67  VCQELRKESDV---PIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122



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>PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED     +M+   L + GF+ V A D  + V+      PDLIL+D  LP   G +
Sbjct: 4   RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + LK +   +  PV+ LTA     DR + +  G DDY TKP     L+++I  ++ R
Sbjct: 64  FIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122



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>PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED     +M+   L + GF+ V A D  + V+      PDLIL+D  LP   G +
Sbjct: 4   RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + LK +   +  PV+ LTA     DR + +  G DDY TKP     L+++I  ++ R
Sbjct: 64  FIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122



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>PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED     +M+   L + GF+ V A D  + V+      PDLIL+D  LP   G +
Sbjct: 4   RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + LK +   +  PV+ LTA     DR + +  G DDY TKP     L+++I  ++ R
Sbjct: 64  FIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122



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>PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED     +M+   L + GF+ V A D  + V+      PDLIL+D  LP   G +
Sbjct: 4   RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + LK +   +  PV+ LTA     DR + +  G DDY TKP     L+++I  ++ R
Sbjct: 64  FIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122



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>PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 41/119 (34%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED     +M+   L + GF+ V A D  + V+      PDLIL+D  LP   G +
Sbjct: 4   RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGLQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + LK +   +  PV+ LTA     DR + +  G DDY TKP     L+++I  ++ R
Sbjct: 64  FIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122



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>MTRA_MYCTU (P0A5Z4) DNA-binding response regulator mtrA|
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D+    +ML+  L  +GF+  +  DG   +   R  +PDL+L+D+ LP M+G +
Sbjct: 4   RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGID 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L+AD      P++ LTA     D    + +G DDY  KP +   L++++   L R
Sbjct: 64  VCRVLRAD---SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119



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>MTRA_MYCPA (Q93CB8) DNA-binding response regulator mtrA|
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D+    +ML+  L  +GF+  +  DG   +   R  +PDL+L+D+ LP M+G +
Sbjct: 4   RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGID 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L+AD      P++ LTA     D    + +G DDY  KP +   L++++   L R
Sbjct: 64  VCRVLRAD---SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119



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>MTRA_MYCLE (Q9CCJ2) DNA-binding response regulator mtrA|
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D+    +ML+  L  +GF+  +  DG   +   R  +PDL+L+D+ LP M+G +
Sbjct: 4   RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGID 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L+AD      P++ LTA     D    + +G DDY  KP +   L++++   L R
Sbjct: 64  VCRVLRAD---SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119



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>MTRA_MYCBO (P0A5Z5) DNA-binding response regulator mtrA|
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D+    +ML+  L  +GF+  +  DG   +   R  +PDL+L+D+ LP M+G +
Sbjct: 4   RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGID 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L+AD      P++ LTA     D    + +G DDY  KP +   L++++   L R
Sbjct: 64  VCRVLRAD---SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR 119



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>MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe suppressor 4)|
          Length = 522

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 26/140 (18%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +L+VEDN  N  +L   + ++     +A DG   ++  +++   LILMD+ LP M G E 
Sbjct: 364 VLIVEDNIINQKILETFMKKRNISSEVAKDGLEALEKWKKKSFHLILMDIQLPTMSGIEV 423

Query: 406 TRQLKADPELQ------------------------QTPVI--ALTAHAMASDREKAIAAG 305
           T++++    L                         Q+PVI  ALTA ++ +DR +A+AAG
Sbjct: 424 TQEIRRLERLNAIGVGAPKLTQPIPEKDQLNENKFQSPVIIVALTASSLMADRNEALAAG 483

Query: 304 CDDYDTKPIELPRLLSKIAQ 245
           C+D+ TKP+ L  L  KI +
Sbjct: 484 CNDFLTKPVSLVWLEKKITE 503



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>ATOC_ECOLI (Q06065) Acetoacetate metabolism regulatory protein atoC|
           (Ornithine/arginine decarboxylase inhibitor) (Ornithine
           decarboxylase antizyme)
          Length = 461

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 40/127 (31%), Positives = 71/127 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           + +IL+V+D ++   MLS     +GFE   A++G   +       PD++LMD+ +P MDG
Sbjct: 4   INRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDG 63

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            +A +++++     +TPVI +TA+A      +A+  G  DY  KP +L  L   + + L+
Sbjct: 64  IKALKEMRSHE--TRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQ 121

Query: 235 R*SHRRE 215
             S ++E
Sbjct: 122 LQSMKKE 128



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>YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 255

 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 37/119 (31%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+ +D      +L  RL+  G+EV+ A DG + +    +E P+L+++D+ +P +DG+ 
Sbjct: 9   KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLFHKEHPNLVVLDVMMPKIDGYG 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++++ + ++   P+I LTA    +DR   +  G DDY  KP     L ++I  +L R
Sbjct: 69  VCQEIRKESDI---PIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRR 124



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>YCF29_PORPU (P51343) Probable transcriptional regulator ycf29|
          Length = 209

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 40/118 (33%), Positives = 64/118 (54%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           ++LVE++      +   L  +GF V +A +G      A + + DLI+ D+ +P++DG+E 
Sbjct: 5   LMLVENDTVLSKAIQEYLIDQGFNVDIALNGLEAFQLANKYKFDLIISDIIMPIIDGYEL 64

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             +L+   +L + PVI LTA  M  DR K    GC  Y +KP +   L+S I  L+ R
Sbjct: 65  LEKLRKIDKLAKIPVIFLTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKNLIYR 122



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>CREB_ECOLI (P08368) Transcriptional regulatory protein creB|
          Length = 229

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           + LVED +   D L   L ++GF V +   G   +D AR++ PD++++D+ LP + G+E 
Sbjct: 6   VWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARKQVPDVMILDVGLPDISGFEL 65

Query: 406 TRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            RQL A  P L   PV+ LTA +   DR   +  G DDY  KP     + +++  LL R
Sbjct: 66  CRQLLALHPAL---PVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR 121



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>EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3)|
          Length = 1197

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 39/115 (33%), Positives = 68/115 (59%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
            IL+ +D+  N  +L R+L   G++V  A DG   +     +  DL++ D+++P MDG+E 
Sbjct: 961  ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFEL 1020

Query: 406  TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
            TR+L+   +    P+  LTA+A A++REK ++ G +    KP+ L  L + ++QL
Sbjct: 1021 TRKLR--EQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQL 1073



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>YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2)|
          Length = 444

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLV+D+     +L  RLT +G+ VV A  GA G+    RE+ DL++ D+ +  MDG + 
Sbjct: 8   LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQL 67

Query: 406 TRQL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++ K  P +   PVI LTAH    D   A   G   + TKP++   L   I   LE+
Sbjct: 68  FAEIQKVQPGM---PVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQ 123



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>YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA|
          Length = 444

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLV+D+     +L  RLT +G+ VV A  GA G+    RE+ DL++ D+ +  MDG + 
Sbjct: 8   LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQL 67

Query: 406 TRQL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++ K  P +   PVI LTAH    D   A   G   + TKP++   L   I   LE+
Sbjct: 68  FAEIQKVQPGM---PVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQ 123



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>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC|
            2.7.13.3) (Mcs4-associated kinase 1) (His-Asp
            phosphorelay kinase phk3)
          Length = 1639

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPD---LILMDMSLPVMDG 416
            +LL EDN  N  ++SR L R G +  +  DG   V+  +RE+P+   LILMD+ +PVMDG
Sbjct: 1508 VLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPVMDG 1567

Query: 415  WEA---TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
            ++A    R+ + + +  + P++AL+A+A+         +G D Y  KPI L  L   I+ 
Sbjct: 1568 YQACNEIRKYELENDYPKVPIVALSANALPHVVLSCKDSGFDSYLAKPITLQHLSLIISG 1627

Query: 244  LL 239
            +L
Sbjct: 1628 IL 1629



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>QSEB_HAEIN (P45337) Transcriptional regulatory protein qseB|
          Length = 221

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 39/119 (32%), Positives = 64/119 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILL+ED+    + L   LT+ GF V    DG  G+        D +++D++LP +DG E
Sbjct: 2   RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             +Q +++   Q  PV+ LTA     +R K + +G DDY  KP  L  + +++  L+ R
Sbjct: 62  VLQQWRSNH--QDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118



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>KDPE_ECOLI (P21866) KDP operon transcriptional regulatory protein kdpE|
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 45/128 (35%), Positives = 64/128 (50%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           MT +L+VED +     L   L   G  V  A     G+  A   +PDLI++D+ LP  DG
Sbjct: 1   MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R L+   +    PVI L+A +  SD+  A+ AG DDY +KP  +  L +++   L 
Sbjct: 61  IEFIRDLR---QWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR 117

Query: 235 R*SHRREP 212
           R S    P
Sbjct: 118 RHSATTAP 125



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>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 948

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 36/119 (30%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
            IL+V+D+  N  +L+ +L   G++   A+DG   ++   +   D++L D+++P MDG+  
Sbjct: 827  ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRL 886

Query: 406  TRQLKADPELQQT-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            T++++   +L  T PV+ +TA+A+A ++++ + +G D   +KP+ L  L   +A   ER
Sbjct: 887  TQRIR---QLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALKQTLAVYAER 942



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>CHVI_AGRTU (Q07783) Transcriptional regulatory protein chvI|
          Length = 241

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 42/125 (33%), Positives = 63/125 (50%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  I LV+D+ +    +S  L R+G+ V    DGA+ VD      P L + D+ +P MDG
Sbjct: 1   MQTIALVDDDRNILTSVSIALEREGYRVETYTDGASAVDGLIARPPQLAIFDIKMPRMDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+L+   ++   PVI LT+     D    +  G DD+ TKP     L+ ++  +L 
Sbjct: 61  MELLRRLRQKSDI---PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILR 117

Query: 235 R*SHR 221
           R S R
Sbjct: 118 RASSR 122



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>DLTR_STRA5 (P0A4I0) Transcriptional regulatory protein dltR|
          Length = 224

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 38/113 (33%), Positives = 61/113 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VED +   + +   L  KG+ V LA DG  G++       DL+L+D+ LP   G  
Sbjct: 2   RLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGLYDLVLLDIMLPKRSGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
             ++++      +TP+I LTA +   D+   +  G DDY TKP E   LL++I
Sbjct: 62  VLKRVREAG--LETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADELLARI 112



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>DLTR_STRA3 (P0A4H9) Transcriptional regulatory protein dltR|
          Length = 224

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 38/113 (33%), Positives = 61/113 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VED +   + +   L  KG+ V LA DG  G++       DL+L+D+ LP   G  
Sbjct: 2   RLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGLYDLVLLDIMLPKRSGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
             ++++      +TP+I LTA +   D+   +  G DDY TKP E   LL++I
Sbjct: 62  VLKRVREAG--LETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADELLARI 112



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>RPRY_BACFR (Q9AE24) Transcriptional regulatory protein rprY|
          Length = 236

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 39/119 (32%), Positives = 61/119 (51%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILL ED+E+   +L   L  KG+   L  DG AG     + + DL + D+ +P  DG+ 
Sbjct: 9   RILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGFKAFLKNKYDLCVFDVMMPKKDGFT 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++++A     + P+I LTA  +  D  +    G DDY TKP  +  L  +I  +L R
Sbjct: 69  LAQEVRA--ANAEIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRR 125



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>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 948

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 36/119 (30%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
            IL+V+D+  N  +L+ +L   G++   A+DG   ++   +   D++L D+++P MDG+  
Sbjct: 827  ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNMPNMDGYRL 886

Query: 406  TRQLKADPELQQT-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            T++++   +L  T PV+ +TA+A+A ++++ + +G D   +KP+ L  L   +A   ER
Sbjct: 887  TQRIR---QLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLAVYAER 942



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>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)|
          Length = 1220

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 40/115 (34%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVD-----TARREQPDLILMDMSLP 428
            KIL+VEDN  N +++ R L  +G E + LA DG    D     T++ E  ++I MD+ +P
Sbjct: 1089 KILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMP 1148

Query: 427  VMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
             +DG  +T+ ++ D     +P++ALTA A  S+ ++ + +G + + +KPI+ P+L
Sbjct: 1149 KVDGLLSTKMIRRDLGYT-SPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKL 1202



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>RESD_BACSU (P35163) Transcriptional regulatory protein resD|
          Length = 240

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 40/120 (33%), Positives = 62/120 (51%)
 Frame = -2

Query: 592 TKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           TKIL+V+D      +L   L R+ + +  A +G   +        DLIL+D+ +P  DG 
Sbjct: 7   TKILVVDDEARIRRLLRMYLERENYAIDEAENGDEAIAKGLEANYDLILLDLMMPGTDGI 66

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  RQ++   E + TP+I LTA    ++R +   AG DDY  KP     ++ ++  LL R
Sbjct: 67  EVCRQIR---EKKATPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRR 123



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>SRRA_STAAW (Q7A0U4) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAU (Q9L524) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAS (Q6G972) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAR (Q6GGK6) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAN (Q7A5H6) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAM (Q7A2R6) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>SRRA_STAAC (Q5HFT0) Transcriptional regulatory protein srrA (Staphylococcal|
           respiratory response protein A)
          Length = 241

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/119 (32%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+V+D +    +L   L R+ FE+  A +G    + A       IL+D+ LP MDG +
Sbjct: 4   EILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQ 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              +L+   E +QTP+I LTA    ++R +   +G DDY  KP     ++ ++  LL R
Sbjct: 64  VATKLR---EHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119



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>EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3)|
          Length = 1197

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 38/115 (33%), Positives = 67/115 (58%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
            IL+ +D+  N  +L R+L   G++V  A DG   +     +  DL++ D+++P +DG+E 
Sbjct: 961  ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNVDGFEL 1020

Query: 406  TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
            TR+L+   +    P+  LTA+A A++REK +  G +    KP+ L  L + ++QL
Sbjct: 1021 TRKLR--EQNSSLPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQL 1073



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>CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (Response|
           regulator sokA)
          Length = 231

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 37/119 (31%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++LL+ED+      +   L  +GF V     G  GVD  +    DLIL+D++LP M G +
Sbjct: 2   RVLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKIYDYDLILLDLNLPDMSGID 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R L+       TP++ L+  +    + K  A G DDY TKP     ++++I  ++ R
Sbjct: 62  VLRTLRV--AKINTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEMIARIHAVVRR 118



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>RCAC_FREDI (Q01473) Protein rcaC|
          Length = 651

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 42/128 (32%), Positives = 69/128 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KILLVED++    +L++ LT   + V +  DG  G       + DLI++D+ LP +DG  
Sbjct: 2   KILLVEDDDVLIKVLTKNLTTHHYIVDVVKDGEMGWTYGSTFEYDLIILDIMLPNLDGIS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER* 230
             ++ +A  +    P++ LTA    + + + + AG DDY  KP +   L+++I  LL R 
Sbjct: 62  LCKRFRA--QGYTVPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIELIARIRALLRRG 119

Query: 229 SHRREPWL 206
           S+   P L
Sbjct: 120 SNNPFPLL 127



 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 34/119 (28%), Positives = 67/119 (56%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+++++D++D    L   L   GF+V    D        +   PD +++D+++P ++G+E
Sbjct: 527 KVMILDDDQDWLRTLPTLLKPWGFKVTTLADPQQFWTVLQAVTPDALVLDVNMPQINGFE 586

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + L++DP  Q+ PV+ L+     + + +A A G DDY  KP++   L ++I + L+R
Sbjct: 587 LCQLLRSDPHWQRLPVLFLSVLTDPTTQNQAFAVGGDDYLCKPVKGVELANRILRRLQR 645



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>CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyrophosphate-lyase|
           2) (Adenylyl cyclase 2) (AC2)
          Length = 352

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -2

Query: 598 GMTKILLVEDNEDNWDMLSRRLTRKG--FEVVLAHDGAAGVDTARREQPDLILMDMSLPV 425
           G  ++++V+D+    D +   L   G  +EV+   D    ++   + QP ++L D+ +P 
Sbjct: 4   GHHRVMVVDDSPLACDFVKEGLEALGLGYEVMCFQDPYEALEQVGKVQPAIVLSDLDMPG 63

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
           +DG E   +LK  P  +Q PVI LTA+   ++R K + AG DDY  K   +  L ++I  
Sbjct: 64  IDGLELCWRLKESPS-RQVPVIILTANDSEAERVKGLRAGADDYVNKSASMAELSARIES 122

Query: 244 LLER 233
           ++ R
Sbjct: 123 VMRR 126



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>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 949

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 35/119 (29%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
 Frame = -2

Query: 586  ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
            IL+V+D+  N  +L+ +L   G++   A+DG   ++   +   D++L D+++P MDG+  
Sbjct: 827  ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRL 886

Query: 406  TRQLKADPELQQT-PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            T++++   +L  T PVI +TA+A+A ++++ + +G D   +KP+ L  +   +    ER
Sbjct: 887  TQRIR---QLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 942



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>PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+V+D     +M++  L   G+E + A +           +PDLIL+D  LP   G E 
Sbjct: 6   ILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVDRKPDLILLDWMLPGTSGIEL 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+LK D      P+I LTA     ++ + +  G DDY TKP     L++++  +L R
Sbjct: 66  ARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRR 123



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>YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL|
          Length = 226

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 36/117 (30%), Positives = 62/117 (52%)
 Frame = -2

Query: 583 LLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEAT 404
           +LVED+    +M+   LT++GF +V A DG  G+   ++   DL+L+D+ LP ++G +  
Sbjct: 1   MLVEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQQGSYDLVLLDIMLPKLNGMDF- 59

Query: 403 RQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             LK   E    PV+ ++A     D+   +  G DDY  KP  +  L +++   + R
Sbjct: 60  --LKIIREKSNIPVLMISAKDGDVDKALGLGFGADDYIAKPFSMIELTARVKAAIRR 114



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>LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
            (EC 3.1.3.-)
          Length = 857

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 39/105 (37%), Positives = 57/105 (54%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            K+LLVEDN  N  +L     +    V    DG   ++  +    DLILMD  LP M G E
Sbjct: 735  KVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLILMDNQLPKMGGIE 794

Query: 409  ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
            ATR+++   +L  TP+ A TA A  S +++ ++AG +    KPI+
Sbjct: 795  ATREIRETLKL-GTPIYACTADAQESTKQEFLSAGANRVIVKPIK 838



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>LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
            (EC 3.1.3.-)
          Length = 857

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 39/105 (37%), Positives = 57/105 (54%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            K+LLVEDN  N  +L     +    V    DG   ++  +    DLILMD  LP M G E
Sbjct: 735  KVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAFDLILMDNQLPKMGGIE 794

Query: 409  ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
            ATR+++   +L  TP+ A TA A  S +++ ++AG +    KPI+
Sbjct: 795  ATREIRETLKL-GTPIYACTADAQESTKQEFLSAGANRVIVKPIK 838



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>SPHR_SYNP7 (P39663) Alkaline phosphatase synthesis transcriptional regulatory|
           protein sphR
          Length = 257

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
 Frame = -2

Query: 592 TKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARR---------EQPDLILMD 440
           ++IL+VED     DM++  L ++GF V +A DG   ++  R          E PDL+++D
Sbjct: 24  SRILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLD 83

Query: 439 MSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLL 260
           + LP ++G +  R L+        P++ L+A    +DR   +  G DDY TKP     L+
Sbjct: 84  LMLPAVNGLDFCRLLRRQGVT--VPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELV 141

Query: 259 SKIAQLLER 233
           ++   LL R
Sbjct: 142 ARCRALLRR 150



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>SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1|
          Length = 712

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +L+VEDN  N  +L   L +      LA +G   V+  +     LI MD+ LPV+ G EA
Sbjct: 506 VLIVEDNVINQAILGSFLRKHKISYKLAKNGQEAVNIWKEGGLHLIFMDLQLPVLSGIEA 565

Query: 406 TRQLK------------------------ADPELQQTPVI--ALTAHAMASDREKAIAAG 305
            +Q++                              Q PVI  ALTA     D+ KA+ +G
Sbjct: 566 AKQIRDFEKQNGIGIQKSLNNSHSNLEKGTSKRFSQAPVIIVALTASNSQMDKRKALLSG 625

Query: 304 CDDYDTKPIELPRLLSKIAQ 245
           C+DY TKP+ L  L  KI +
Sbjct: 626 CNDYLTKPVNLHWLSKKITE 645



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>CHVI_RHIME (P50350) Transcriptional regulatory protein chvI|
          Length = 240

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 39/125 (31%), Positives = 64/125 (51%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  I LV+D+ +    +S  L  +G++V    DGA+ ++      P L + D+ +P MDG
Sbjct: 1   MQTIALVDDDRNILTSVSIALEAEGYKVETYTDGASALEGLLARPPQLAIFDIKMPRMDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+L+   +L   PVI LT+     D    +  G DD+ TKP     L+ ++  +L 
Sbjct: 61  MELLRRLRQKSDL---PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILR 117

Query: 235 R*SHR 221
           R ++R
Sbjct: 118 RAANR 122



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>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLVED E N  +    L + G  V +A  G A ++  +  + DL+L+D+ LP M G + 
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDI 587

Query: 406 TRQL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           +R+L K  P     P++ALTA+ +  D+++ + AG DD  +KP+ +P L + I
Sbjct: 588 SRELTKRYPREDLPPLVALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639



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>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLVED E N  +    L + G  V +A  G A ++  +  + DL+L+D+ LP M G + 
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDI 587

Query: 406 TRQL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           +R+L K  P     P++ALTA+ +  D+++ + AG DD  +KP+ +P L + I
Sbjct: 588 SRELTKRYPREDLPPLVALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639



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>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLVED E N  +    L + G  V +A  G A ++  +  + DL+L+D+ LP M G + 
Sbjct: 528 VLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDI 587

Query: 406 TRQL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           +R+L K  P     P++ALTA+ +  D+++ + AG DD  +KP+ +P L + I
Sbjct: 588 SRELTKRYPREDLPPLVALTANVL-KDKQEYLNAGMDDVLSKPLSVPALTAMI 639



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>PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 231

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 40/119 (33%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+VED     +M++  L++K ++V+ A D    ++  + E P LIL+D  LP   G +
Sbjct: 4   KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIK-ENPKLILLDWMLPGRSGIQ 62

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             + +K        P+I LTA +   D    + AG DDY TKP     LL++I  +  R
Sbjct: 63  FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRR 121



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>TCSA_EMENI (Q9P896) Two-component system protein A (EC 2.7.13.3)|
          Length = 719

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRK-GFEVVLAHDGA-AGVDTAR--REQP---DLILMDMSLP 428
           +LLVEDN  N        T + GF+ +   DGA  G +  R  R++P   D+ILMD+S+P
Sbjct: 561 VLLVEDNIVNHTRYVEAPTYQFGFQRI---DGAWNGAEAVRMVRQKPLSYDIILMDVSMP 617

Query: 427 VMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLL 260
           V+DG  AT Q++ D  L   P+IA+T +AM  D E  IA G DD   KP+   +LL
Sbjct: 618 VLDGLAATEQIR-DMGLTM-PIIAITGNAMKGDAETYIAQGMDDCICKPVHRDQLL 671



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>SP0A_CLODI (P52938) Stage 0 sporulation protein A homolog|
          Length = 274

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL--AHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           KI+L +DN+D   +L   L+ +    +L  A DG   +D  ++ QPDL+++D+ +P +DG
Sbjct: 10  KIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDG 69

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
                +L      +   +I L+A       + AI  G D Y  KP +    +++I +L+ 
Sbjct: 70  LGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVS 129

Query: 235 R*SHRREPWLPP*PSTAMKLRRQFLLFGVGTTFTAIAAI 119
               + EP   P P    ++ R   +  VG   T I  I
Sbjct: 130 NRVTQVEP--KPRPVQETQMTRSDFVKNVGNIETEITNI 166



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>CHEY_BACSU (P24072) Chemotaxis protein cheY homolog|
          Length = 119

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           +IL+V+D      M+   L + GFEVV  A +GA  V+  +   PDL+ MD+++P MDG 
Sbjct: 3   RILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHSPDLVTMDITMPEMDGI 62

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            A +++K      Q  +I  +A    S    AI AG  D+  KP +  R+L  I + L
Sbjct: 63  TALKEIKQID--AQARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTL 118



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>QSEB_SALTY (P66795) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 37/119 (31%), Positives = 64/119 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILLVED+    D +   L++ GF V    +G  G +       D +++D++LP MDG +
Sbjct: 2   RILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +   + +Q PV+ LTA    ++R + +  G DDY  KP  L  + +++  L+ R
Sbjct: 62  ILREWR--EKGKQEPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRR 118



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>QSEB_SALTI (P66796) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 37/119 (31%), Positives = 64/119 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILLVED+    D +   L++ GF V    +G  G +       D +++D++LP MDG +
Sbjct: 2   RILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVILDLTLPGMDGRD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +   + +Q PV+ LTA    ++R + +  G DDY  KP  L  + +++  L+ R
Sbjct: 62  ILREWR--EKGKQEPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALVRR 118



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>TORR_ECOLI (P38684) TorCAD operon transcriptional regulatory protein torR|
          Length = 230

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 39/118 (33%), Positives = 61/118 (51%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           I++VED       L    T++G+ V +   GA   +  + +  DLIL+D++LP  +G   
Sbjct: 5   IVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLML 64

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           TR L+   E     +I +T  +   DR   +  G DDY TKP+EL  L+ ++  LL R
Sbjct: 65  TRALR---ERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 119



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>TORR_ECO57 (P58357) TorCAD operon transcriptional regulatory protein torR|
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 39/118 (33%), Positives = 61/118 (51%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           I++VED       L    T++G+ V +   GA   +  + +  DLIL+D++LP  +G   
Sbjct: 5   IVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLML 64

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           TR L+   E     +I +T  +   DR   +  G DDY TKP+EL  L+ ++  LL R
Sbjct: 65  TRALR---ERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 119



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>CPXR_HAEIN (P44895) Transcriptional regulatory protein cpxR homolog|
          Length = 227

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 37/121 (30%), Positives = 67/121 (55%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M+K+LLV+D+ +  ++LS  L  +GF+V  A++G   +     E   L+L+D+ +P ++G
Sbjct: 1   MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLN-ESYKLVLLDVMMPKLNG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  ++++   ++   PV+ LTA     DR   +  G DD   KP     L+++I  +L 
Sbjct: 60  IETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116

Query: 235 R 233
           R
Sbjct: 117 R 117



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>GTCR_ANEMI (Q44929) Response regulator gtcR|
          Length = 242

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
 Frame = -2

Query: 595 MTKILLVEDNEDNW-DMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           M+K +L+ D+E    ++L   L R+ + ++ A+DG    +  R+   DL ++D+ +P +D
Sbjct: 1   MSKTILIADDEPEIIELLKLFLERESYRIIEAYDGEQAWNYIRQHPVDLAIIDIMMPALD 60

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
           G++  ++L  + +L   PVI L+A    SD+   +  G DD+ +KP      +++I   L
Sbjct: 61  GFQLIKRLTNEYKL---PVIILSAKNRDSDKILGLGLGADDFISKPFNPLEAVARIQAQL 117

Query: 238 ER*SHRREP 212
            R     EP
Sbjct: 118 RRAFEFNEP 126



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>QSEB_ECOLI (P52076) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 36/119 (30%), Positives = 63/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILL+ED+    D +   L++ GF V     G  G +       D +++D++LP MDG +
Sbjct: 2   RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +   + Q+ PV+ LTA    ++R + +  G DDY  KP  L  + +++  L+ R
Sbjct: 62  ILREWR--EKGQREPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRR 118



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>QSEB_ECO57 (Q8XBS3) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 36/119 (30%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILL+ED+    D +   L++ GF V     G  G +       D +++D++LP MDG +
Sbjct: 2   RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRD 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +   + Q+ PV+ LTA     +R + +  G DDY  KP  L  + +++  L+ R
Sbjct: 62  ILREWR--EKGQREPVLILTARDALEERVEGLRLGADDYLCKPFALIEVAARLEALMRR 118



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>YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 249

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 34/118 (28%), Positives = 61/118 (51%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +L+V+D  +   +L  RLT  G+ V  A +G   +        DLI++D+ +P +DG+  
Sbjct: 14  LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTHSIDLIILDVMMPKLDGYGV 73

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            ++++ + ++   P+I LTA     D+   +  G DDY  KP     L ++I  +L R
Sbjct: 74  CQEIRKESDI---PIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128



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>PHOP_SALTY (P14146) Virulence transcriptional regulatory protein phoP|
          Length = 224

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 35/121 (28%), Positives = 60/121 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M ++L+VEDN      L  +L   G +V  A D            PD+ ++D+ LP  DG
Sbjct: 1   MMRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
               R+ ++       PV+ LTA     D+ + +++G DDY TKP  +  +++++  L+ 
Sbjct: 61  LSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMR 118

Query: 235 R 233
           R
Sbjct: 119 R 119



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>PHOP_SALTI (Q8Z7H2) Virulence transcriptional regulatory protein phoP|
          Length = 224

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 35/121 (28%), Positives = 60/121 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M ++L+VEDN      L  +L   G +V  A D            PD+ ++D+ LP  DG
Sbjct: 1   MMRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
               R+ ++       PV+ LTA     D+ + +++G DDY TKP  +  +++++  L+ 
Sbjct: 61  LSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMR 118

Query: 235 R 233
           R
Sbjct: 119 R 119



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>PHOP_SALPA (Q5PMJ1) Virulence transcriptional regulatory protein phoP|
          Length = 224

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 35/121 (28%), Positives = 60/121 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M ++L+VEDN      L  +L   G +V  A D            PD+ ++D+ LP  DG
Sbjct: 1   MMRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAIVDLGLPDEDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
               R+ ++       PV+ LTA     D+ + +++G DDY TKP  +  +++++  L+ 
Sbjct: 61  LSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMR 118

Query: 235 R 233
           R
Sbjct: 119 R 119



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>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein|
           POS9)
          Length = 622

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 40/129 (31%), Positives = 67/129 (51%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +LLVED+  +  + S+ L + G  V +  DG + + T  + + DL+LMD+ +P +DG  A
Sbjct: 379 VLLVEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLEKYRYDLVLMDIVMPNLDGATA 438

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*S 227
           T  +++     +TP+IA+T + M  D    +  G +D   KP     L S + + L+   
Sbjct: 439 TSIVRSFD--NETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSILIRYLKDRI 496

Query: 226 HRREPWLPP 200
              E  LPP
Sbjct: 497 PLCEQQLPP 505



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>CUTR_STRLI (P0A4I2) Transcriptional regulatory protein cutR (Defective melC1|
           suppressor protein)
          Length = 217

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VED +   D ++  L R+   V + +DGAA ++       D++++D  LP++ G +
Sbjct: 2   RVLVVEDEQLLADAVATGLRREAMAVDVVYDGAAALERIGVNDYDVVVLDRDLPLVHGDD 61

Query: 409 ATRQLKADPEL-QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R++    EL   T V+ LTA    SDR + +  G DDY  KP     L++++  L  R
Sbjct: 62  VCRKI---VELGMPTRVLMLTASGDVSDRVEGLEIGADDYLPKPFAFSELIARVRALGRR 118



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>CUTR_STRCO (P0A4I1) Transcriptional regulatory protein cutR (Defective melC1|
           suppressor protein)
          Length = 217

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VED +   D ++  L R+   V + +DGAA ++       D++++D  LP++ G +
Sbjct: 2   RVLVVEDEQLLADAVATGLRREAMAVDVVYDGAAALERIGVNDYDVVVLDRDLPLVHGDD 61

Query: 409 ATRQLKADPEL-QQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R++    EL   T V+ LTA    SDR + +  G DDY  KP     L++++  L  R
Sbjct: 62  VCRKI---VELGMPTRVLMLTASGDVSDRVEGLEIGADDYLPKPFAFSELIARVRALGRR 118



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>ZRAR_SALTY (P25852) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
 Frame = -2

Query: 598 GMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           G   IL+V+D+  +  +L   L   G+ V LA+ G   +   R +  DL+L D+ +  MD
Sbjct: 4   GKIDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMD 63

Query: 418 GWEATRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
           G    +++KA +P +   P++ +TA +      +A+ AG  DY  KP++  RL   + + 
Sbjct: 64  GIATLKEIKALNPAI---PILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKA 120

Query: 241 LER*SHRRE 215
           L   +H RE
Sbjct: 121 L---AHTRE 126



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>ZRAR_SALTI (Q8Z333) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
 Frame = -2

Query: 598 GMTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           G   IL+V+D+  +  +L   L   G+ V LA+ G   +   R +  DL+L D+ +  MD
Sbjct: 4   GKIDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMD 63

Query: 418 GWEATRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
           G    +++KA +P +   P++ +TA +      +A+ AG  DY  KP++  RL   + + 
Sbjct: 64  GIATLKEIKALNPAI---PILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKA 120

Query: 241 LER*SHRRE 215
           L   +H RE
Sbjct: 121 L---AHTRE 126



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>ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR|
          Length = 443

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+V+D+  +  +L   L   G+ V LA++G   ++  R +  DL+L D+ +  MDG E 
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKVFDLVLCDIRMAEMDGIET 67

Query: 406 TRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            +++K  +P +   PV+ +TA++      +A+ +G  DY  KP++  +L   +++ L
Sbjct: 68  LKEIKTFNPSI---PVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEAL 121



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>VANR_ENTFA (Q47744) Regulatory protein vanRB|
          Length = 220

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 37/119 (31%), Positives = 62/119 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILLVED++   + +   L    +EV    DG             L+++D+ LP M+G E
Sbjct: 4   RILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQLVILDIMLPGMNGHE 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +A  +   TP++ +TA +   ++ +A  A  DDY TKP ++  LL ++  LL R
Sbjct: 64  LLREFRAQND---TPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR 119



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>PETR_RHOCA (P31079) Protein petR|
          Length = 245

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAG--VDTARREQPDLILMDMSLPVMDGW 413
           +L+V+D+E    +L + L R GF V    D A    + T    + +LI++D+ +P  DG 
Sbjct: 9   LLIVDDDERIRGLLQKFLIRNGFLVTAGRDAAHARRLFTLSGLEFNLIVLDVMMPGEDGL 68

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDY--DTKPIELPRLLSKIAQLL 239
             TR L+       TP++ LTA     +R + + AG DDY    KP E   LL +I  +L
Sbjct: 69  SLTRDLRTK---MATPILLLTARGETRERIEGLEAGADDYLFTPKPFEPKELLLRINAIL 125

Query: 238 ER 233
            R
Sbjct: 126 RR 127



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>CIAR_STRR6 (P0A4H8) Transcriptional regulatory protein ciaR|
          Length = 224

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
 Frame = -2

Query: 595 MTKILLVEDN----EDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLP 428
           M KILLVED+       +D L         +V+   DG  G+  A     DLIL+D+ LP
Sbjct: 1   MIKILLVEDDLGLSNSVFDFLDDFA-----DVMQVFDGEEGLYEAESGVYDLILLDLMLP 55

Query: 427 VMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIA 248
             +G++  ++L+       TPV+ +TA     D+      G DDY TKP  L  L  +I 
Sbjct: 56  EKNGFQVLKELREKGIT--TPVLIMTAKESLDDKGHGFELGADDYLTKPFYLEELKMRIQ 113

Query: 247 QLLER 233
            LL+R
Sbjct: 114 ALLKR 118



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>CIAR_STRPN (P0A4H7) Transcriptional regulatory protein ciaR|
          Length = 224

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
 Frame = -2

Query: 595 MTKILLVEDN----EDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLP 428
           M KILLVED+       +D L         +V+   DG  G+  A     DLIL+D+ LP
Sbjct: 1   MIKILLVEDDLGLSNSVFDFLDDFA-----DVMQVFDGEEGLYEAESGVYDLILLDLMLP 55

Query: 427 VMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIA 248
             +G++  ++L+       TPV+ +TA     D+      G DDY TKP  L  L  +I 
Sbjct: 56  EKNGFQVLKELREKGIT--TPVLIMTAKESLDDKGHGFELGADDYLTKPFYLEELKMRIQ 113

Query: 247 QLLER 233
            LL+R
Sbjct: 114 ALLKR 118



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>YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29|
          Length = 210

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 37/121 (30%), Positives = 58/121 (47%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  IL+++ +    + L   LT  GF V  +       D  +R++ DLI+ D+ +P M G
Sbjct: 1   MINILILDTDIGIRNSLKLYLTEIGFHVEESTCVDQAWDILKRKKIDLIICDIIMPGMGG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +    QL+ + +    PVI LT   +  DR      GCD Y +KP  +  L+  I  +L 
Sbjct: 61  FNFLHQLRLNTDYCTLPVILLTTRGLTQDRIIGYKTGCDSYISKPFNIEELVVIIEGVLN 120

Query: 235 R 233
           R
Sbjct: 121 R 121



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>OMPR_SHIFL (P0AA21) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>OMPR_SALTY (P0AA19) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>OMPR_SALTI (P0AA20) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>OMPR_ECOLI (P0AA16) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>OMPR_ECOL6 (P0AA17) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>OMPR_ECO57 (P0AA18) Transcriptional regulatory protein ompR|
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+     +L R LT +GF+V    +         RE   L+++D+ LP  DG  
Sbjct: 6   KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLS 65

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L++  +    P+I +TA     DR   +  G DDY  KP     LL++I  +L R
Sbjct: 66  ICRRLRS--QSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122



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>BCER_BACHD (Q9K621) Sensory transduction protein bceR|
          Length = 231

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 32/121 (26%), Positives = 63/121 (52%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KI+L+ED+   +  +  RL++  ++V    +    ++     +PDL+++D+ LP  DG
Sbjct: 1   MFKIMLIEDDHTLFSEIKERLSQWSYDVFGVSNFEKVIEEFTSLKPDLVIIDIQLPKFDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +   R ++   +    P+I L++    +D   ++  G DD+  KP     L++KI  +L 
Sbjct: 61  FHWCRMIR---QHSNVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILR 117

Query: 235 R 233
           R
Sbjct: 118 R 118



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>PHOP_SALCH (Q57QC3) Virulence transcriptional regulatory protein phoP|
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 34/121 (28%), Positives = 59/121 (48%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M ++L+VEDN      L  +L   G +V    D            PD+ ++D+ LP  DG
Sbjct: 1   MMRVLVVEDNALLRHHLKVQLQDSGHQVDATEDAREADYYLNEHLPDIAIVDLGLPDEDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
               R+ ++       PV+ LTA     D+ + +++G DDY TKP  +  +++++  L+ 
Sbjct: 61  LSLIRRWRSSDI--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMR 118

Query: 235 R 233
           R
Sbjct: 119 R 119



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>BAER_ECOLI (P69228) Transcriptional regulatory protein baeR|
          Length = 240

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 36/125 (28%), Positives = 58/125 (46%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED      +L   L    +   L   G   +   R+  PDLIL+D+ LP  DG  
Sbjct: 12  RILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLT 71

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER* 230
             R+++        P++ +TA     DR   +  G DDY  KP     +++++  +L R 
Sbjct: 72  LCREIR---RFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRC 128

Query: 229 SHRRE 215
             +RE
Sbjct: 129 KPQRE 133



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>BAER_ECOL6 (P69229) Transcriptional regulatory protein baeR|
          Length = 240

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 36/125 (28%), Positives = 58/125 (46%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED      +L   L    +   L   G   +   R+  PDLIL+D+ LP  DG  
Sbjct: 12  RILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLT 71

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER* 230
             R+++        P++ +TA     DR   +  G DDY  KP     +++++  +L R 
Sbjct: 72  LCREIR---RFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRC 128

Query: 229 SHRRE 215
             +RE
Sbjct: 129 KPQRE 133



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>PHOP_SHIFL (Q83RR0) Virulence transcriptional regulatory protein phoP|
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VEDN      L  ++   G +V  A D            PD+ ++D+ LP  DG  
Sbjct: 2   RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +++      P++ LTA     D+ + ++AG DDY TKP  +  +++++  L+ R
Sbjct: 62  LIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118



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>PHOP_ECOL6 (Q8CXZ9) Transcriptional regulatory protein phoP|
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VEDN      L  ++   G +V  A D            PD+ ++D+ LP  DG  
Sbjct: 2   RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +++      P++ LTA     D+ + ++AG DDY TKP  +  +++++  L+ R
Sbjct: 62  LIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118



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>PHOP_ECOLI (P23836) Transcriptional regulatory protein phoP|
          Length = 223

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 60/119 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VEDN      L  ++   G +V  A D            PD+ ++D+ LP  DG  
Sbjct: 2   RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+ +++      P++ LTA     D+ + ++AG DDY TKP  +  +++++  L+ R
Sbjct: 62  LIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118



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>CHEB_ARCFU (O29221) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 349

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           ++L+V+D+      ++  LT+ G EVV  A +G   V+ A + +PD+I +D+++P MDG 
Sbjct: 2   RVLVVDDSALVRMAVTDILTKAGIEVVDTAKNGREAVEKALKLKPDVITLDINMPEMDGL 61

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDRE--KAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            A   LK   E Q TPV+ L++      RE  +A+  G  D+ TKP      LS +AQ L
Sbjct: 62  TA---LKLIMEKQPTPVVMLSSLTKEGARETLEALKIGAVDFVTKPDGALVDLSSVAQEL 118

Query: 238 ER 233
            R
Sbjct: 119 VR 120



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>BCER_BACSU (O34951) Sensory transduction protein bceR|
          Length = 231

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 33/124 (26%), Positives = 61/124 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M K+LL+ED+E  +  +  RLT   ++V    D +  +       PD +++D+ LP  DG
Sbjct: 1   MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDG 60

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +   R +++       P++ L++    +D   ++  G DD+  KP     L++KI  +  
Sbjct: 61  FHWCRLIRS---RSNVPILFLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFR 117

Query: 235 R*SH 224
           R  H
Sbjct: 118 RVHH 121



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>ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+V+D+  +  +L   L   G+ V LA+ G   ++  R +  DL+L D+ +  MDG   
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 406 TRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            +++KA +P +   PV+ +TA++      +A+  G  DY  KP++   L + + + L
Sbjct: 68  LKEIKALNPAI---PVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121



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>SP0A_BACAN (P52928) Stage 0 sporulation protein A|
          Length = 264

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKG-FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ LV+DN++   ML   +  +   EV+  A++G   ++  + +QPD++++D+ +P +DG
Sbjct: 5   KVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +++    L+Q  VI LTA       +KA+  G   +  KP ++  L S I Q+
Sbjct: 65  LAVLEKMRHIERLRQPSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQV 122



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>PILG_PSEAE (P46384) Protein pilG|
          Length = 135

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 31/113 (27%), Positives = 56/113 (49%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K+++++D++         L + G +V+ A DG   +       P++I +D+ +P +DG++
Sbjct: 9   KVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQ 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
               +K +   + TPVI L++     D+ K    G D Y TKP     LL  I
Sbjct: 69  TCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAI 121



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>SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F (EC 2.7.-.-)|
           (Stage 0 sporulation protein F)
          Length = 124

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 32/117 (27%), Positives = 61/117 (52%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D      +L+    ++G++   A +G   +D   +E+PDL+L+DM +P MDG E
Sbjct: 5   KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIE 64

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
             +++K   E     VI +TA+      +++   G   +  KP ++  +   + + L
Sbjct: 65  ILKRMKVIDE--NIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL 119



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>CHEB_HALMA (Q5V0B3) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 369

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           + ++ +D+     ++S  L+  G +VV  A DG   V      +PD++ MD+ +PVM+G 
Sbjct: 6   RAVVADDSHFMRSVISDILSDGGIDVVAQARDGEEAVSAVIEHRPDVVTMDVEMPVMNGI 65

Query: 412 EATRQLKADPELQQTPVIALTAHA--MASDREKAIAAGCDDYDTKP-----IELPRLLSK 254
           EAT ++ A+     TPV+ L+AH    A    +A+  G  D+ TKP     +E+ RL  +
Sbjct: 66  EATERIMAE---SPTPVLMLSAHTDENADVTFEALDKGAVDFFTKPGGEVSMEMSRLKDQ 122

Query: 253 IAQLL 239
           + +++
Sbjct: 123 LVEMV 127



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>ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+V+D+  +  +L   L   G+ V LA+ G   ++  R    DL+L D+ +  MDG   
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIAT 67

Query: 406 TRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            +++KA +P +   PV+ +TA++      +A+  G  DY  KP++   L + + + L
Sbjct: 68  LKEIKALNPAI---PVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKAL 121



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>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
            (EC 3.1.3.-)
          Length = 858

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 36/105 (34%), Positives = 55/105 (52%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            K+LLVEDN  N  +L    T+   +V  A DG   ++  +    DLILMD  LP + G E
Sbjct: 735  KVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKDHSYDLILMDNQLPHLGGIE 794

Query: 409  ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
             T++++ + +L  TP+ A TA       +  + AG +    KPI+
Sbjct: 795  TTKEIRQNLKL-GTPIYACTADTAQETSDAFMEAGANYVLLKPIK 838



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>NISR_LACLA (Q07597) Nisin biosynthesis regulatory protein nisR|
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 32/119 (26%), Positives = 65/119 (54%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D+++   ++   L  + +EV    + +  +D    +  DLIL+D+ +  ++G E
Sbjct: 4   KILIVDDDQEILKLMKTALEMRNYEVATHQNISLPLDITDFQGFDLILLDIMMSNIEGTE 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++++ +     TP+I ++A     D    +  G DDY TKP  L +L++K+   ++R
Sbjct: 64  ICKRIRREIS---TPIIFVSAKDTEEDIINGLGIGGDDYITKPFSLKQLVAKVEANIKR 119



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>SP0A_BACTU (P0A4I4) Stage 0 sporulation protein A|
          Length = 264

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKG-FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ LV+DN++   ML   +  +   EV+  A++G   ++    +QPD++++D+ +P +DG
Sbjct: 5   KVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +++    L+Q  VI LTA       +KA+  G   +  KP ++  L S I Q+
Sbjct: 65  LAVLEKMRHIERLKQPSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQV 122



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>SP0A_BACCR (P0A4I3) Stage 0 sporulation protein A|
          Length = 264

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKG-FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ LV+DN++   ML   +  +   EV+  A++G   ++    +QPD++++D+ +P +DG
Sbjct: 5   KVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +++    L+Q  VI LTA       +KA+  G   +  KP ++  L S I Q+
Sbjct: 65  LAVLEKMRHIERLKQPSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQV 122



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>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3) (NHK1|
            protein) (SLN1 homolog)
          Length = 1070

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
 Frame = -2

Query: 604  GLGMTKILLVEDNEDNWDMLSRRLTRKG-FEVVLAHDGAAGVDTARREQP-----DLILM 443
            GL   + L+ EDN  N +++ R L  +  ++V +  DG    DT +         DLI M
Sbjct: 929  GLKKIRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKVFDLIFM 988

Query: 442  DMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            D+ +P +DG E+TR ++        P++AL+A +  S+ +  + +G D + +KPI  P L
Sbjct: 989  DIQMPNLDGIESTRLIRQMG--CSAPIVALSAFSEDSNIKDCMNSGMDMFISKPIRRPAL 1046



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>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)|
          Length = 777

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 51/102 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++LLV+D+          +   G  V  A DG       +    DLIL D+ +P +DG+ 
Sbjct: 660 RVLLVDDSPIARATEGALVKALGHSVEEAQDGEEAYVKVQNNTYDLILTDVQMPKLDGFS 719

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
             R+LK+ P + + PVI L++ A   D+ + + AG D Y  K
Sbjct: 720 LARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761



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>DCTR_BACME (P39486) Probable C4-dicarboxylate response regulator dctR|
          Length = 228

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTR-KGFEVVLA-HDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           +LL+ED+    ++  + + + +GF V+ A  +G  GV   ++ QPDL ++DM +P  DG 
Sbjct: 8   VLLIEDDPMVQEVNRQFIEQVEGFTVIAAASNGLEGVQLIKQHQPDLTIIDMYMPSQDGL 67

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
              +Q++A+    +T VIA+TA +      K +  G  DY  KP +  R+   + Q
Sbjct: 68  TTLQQIRANG--YKTDVIAVTAASDIETVRKVLQYGAVDYIMKPFKFERMKQALEQ 121



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>PHOP_ECO57 (Q8X738) Transcriptional regulatory protein phoP|
          Length = 223

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 32/119 (26%), Positives = 59/119 (49%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+VEDN      L  ++   G +V  A D            PD+ ++D+ LP  DG  
Sbjct: 2   RVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLS 61

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
              + +++      P++ LTA     D+ + ++AG DDY TKP  +  +++++  L+ R
Sbjct: 62  LICRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118



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>CHEY_PSEAE (Q51455) Chemotaxis protein cheY|
          Length = 124

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGF-EVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           KIL+V+D      ++   L   GF     A DG   +        D ++ D ++P M G 
Sbjct: 2   KILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSGNFDFLVTDWNMPGMTGI 61

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           +  R ++AD  L+  PV+ +TA A      +A  AG + Y  KP     L  KI ++ ER
Sbjct: 62  DLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIEKIFER 121



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>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            ++L+V+D++ N  +L ++L   G  V+ A  G A +   R    D+++ D ++P + G+E
Sbjct: 974  RVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVITDCNMPGISGYE 1033

Query: 409  ATRQLKAD---PELQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
              R+++A    P   +T  I    TA A   + ++  AAG DD   KPI +  L  ++ +
Sbjct: 1034 LARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNE 1093

Query: 244  LLER 233
             + R
Sbjct: 1094 AVAR 1097



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>CHVI_RHISN (P50351) Transcriptional regulatory protein chvI|
          Length = 238

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 39/126 (30%), Positives = 62/126 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  I LV+D+ +    +S  L  +G++V    D +A ++      P L + D+ +P MDG
Sbjct: 1   MQTIALVDDDRNILTSVSIALEAEGYKVETYTDRSA-LEGLLARPPHLAIFDIKMPRMDG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
            E  R+L+   +L   PVI LT+     D    +  G DD+ TKP     L+ ++  +L 
Sbjct: 60  MELLRRLRQKSDL---PVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILR 116

Query: 235 R*SHRR 218
           R S  R
Sbjct: 117 RASGPR 122



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>LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
            (EC 3.1.3.-)
          Length = 857

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            ++LLVEDN  N  +      + G +V    DG   ++  +    DL+LMD  LP +DG E
Sbjct: 731  RVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVE 790

Query: 409  ATRQLKADPELQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIE 275
             TR +K   ++   PV+  A TA  +   R+    AG +    KP++
Sbjct: 791  TTRTIK---KVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLK 834



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>LUXO_VIBVY (Q7MM78) Regulatory protein luxO|
          Length = 453

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 32/106 (30%), Positives = 49/106 (46%)
 Frame = -2

Query: 580 LVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATR 401
           +VED      +    L   G ++ +   G   +D+ +   PDLIL+D+ LP M G +   
Sbjct: 1   MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLH 60

Query: 400 QLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            +KA       P+I +TAH       +A+  G  D+  KP E  RL
Sbjct: 61  AVKASH--PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104



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>LUXO_VIBVU (Q8CWJ5) Regulatory protein luxO|
          Length = 453

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 32/106 (30%), Positives = 49/106 (46%)
 Frame = -2

Query: 580 LVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATR 401
           +VED      +    L   G ++ +   G   +D+ +   PDLIL+D+ LP M G +   
Sbjct: 1   MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLH 60

Query: 400 QLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            +KA       P+I +TAH       +A+  G  D+  KP E  RL
Sbjct: 61  AVKASH--PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104



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>CHEB_HALSA (Q9HQW6) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 347

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           MT+ L+V+D+     ++S  L   G +VV  A +GA  +D     QPD+I MD+ +P MD
Sbjct: 1   MTEALVVDDSHFMRTVISDILEDGGVDVVGTAENGARALDAVTDVQPDVITMDVEMPEMD 60

Query: 418 GWEATRQLKADPELQQTPVIALTAHAM--ASDREKAIAAGCDDYDTKP------------ 281
           G EAT ++  +   Q TP++ ++A     A    +A+  G  D   KP            
Sbjct: 61  GIEATAEIMRE---QPTPILMVSALTTEDADATLEAMEKGAIDTFAKPGGTISTELSGHS 117

Query: 280 IELPRLLSKIAQLLER*SH--RREPWLPP*PSTAMKLRRQFLLFGVGT 143
            EL   + ++A       H    EP  PP  +T+       LL G  T
Sbjct: 118 EELVAAVERVASADPTAGHDVEMEPASPPDATTSEYADNPTLLIGAST 165



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>CHEB_NATPD (Q3IRR4) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 355

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = -2

Query: 583 LLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           ++V+D++    ++S  L   G  VV  A +G +GV+  R  +PD++ MD+ +P MDG EA
Sbjct: 9   VVVDDSQFMRTVISDMLDDAGITVVATASNGESGVEAVRTHEPDVVTMDLKMPGMDGIEA 68

Query: 406 TRQLKADPELQQTPVIALTAHA--MASDREKAIAAGCDDYDTKP 281
           T ++  +     TPV+ L+AHA   A    +A+  G  D+  KP
Sbjct: 69  TGRIMDE---CPTPVLVLSAHADDGAELTFEAMDEGAVDFFKKP 109



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>CHEY_TREPA (P96126) Chemotaxis protein cheY|
          Length = 144

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQP--DLILMDMSLPVMD 419
           ++L+V+D+      + + LT +G+EV   A DG  GV+  +   P  DL+ MD+++P MD
Sbjct: 26  RVLVVDDSMFVSKQIGQILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMD 85

Query: 418 GWEATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
           G  A  + L+ D   +   V+ ++A       +KA+  G  +Y  KP++  ++L +IA +
Sbjct: 86  GITALEKILEFD---KNAKVVIISALGKEELVKKALLLGAKNYIVKPLDRKKVLERIASV 142

Query: 241 LE 236
           L+
Sbjct: 143 LK 144



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>REGX3_MYCLE (P54884) Sensory transduction protein regX3|
          Length = 198

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 46/89 (51%)
 Frame = -2

Query: 499 DGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREK 320
           DG A +    R   D++L+D+ LP M G +  +QL+    +   PVI +TA     D+  
Sbjct: 4   DGPAALAEFDRSGADIVLLDLMLPGMSGTDVYKQLRVRSSV---PVIMVTARDSEIDKVV 60

Query: 319 AIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            +  G DDY TKP     L+++I  +L R
Sbjct: 61  GLELGADDYVTKPYSARELIARIRAVLRR 89



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>VRAR_STAES (Q8CNP9) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRL-TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVM 422
           K+L V+D+E     +S  L T++  EVV   +GA+G D    A   +PDLILMD+ +  M
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQEDIEVV--GEGASGKDAITKAHELKPDLILMDLLMDDM 61

Query: 421 DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           DG EAT ++K D  L Q  V+ LT+     +  +A+ +G D Y  K
Sbjct: 62  DGVEATTEIKKD--LPQIKVVMLTSFIEDKEVYRALDSGVDSYILK 105



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>VRAR_STAEQ (Q5HN50) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRL-TRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVM 422
           K+L V+D+E     +S  L T++  EVV   +GA+G D    A   +PDLILMD+ +  M
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQEDIEVV--GEGASGKDAITKAHELKPDLILMDLLMDDM 61

Query: 421 DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           DG EAT ++K D  L Q  V+ LT+     +  +A+ +G D Y  K
Sbjct: 62  DGVEATTEIKKD--LPQIKVVMLTSFIEDKEVYRALDSGVDSYILK 105



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>VRAR_STAAW (Q7A0I0) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAU (P0C0Z1) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAS (Q6G850) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAR (Q6GFH3) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAN (Q7A4R9) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAM (Q7A2Q1) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>VRAR_STAAC (Q5HEP0) Response regulator protein vraR|
          Length = 209

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +GA+G +    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEVVGEGASGKEAIAKAHELKPDLILMDLLMDDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L Q  V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPQIKVLMLTSFIEDKEVYRALDAGVDSYILK 105



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>SPAR_BACSU (P33112) Subtilin biosynthesis regulatory protein spaR|
          Length = 220

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 38/121 (31%), Positives = 60/121 (49%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M KIL V+D +D   ++   L R   +V +  D   G      +  DLIL+D+ +P +DG
Sbjct: 1   MAKILAVDDEKDILVLIQNILRRDQHQVDIL-DHVHGQPPDVFQGYDLILLDVMMPDIDG 59

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLE 236
           +E  +Q++    L   P++ LTA        K +  G DDY TKP  +  L +++   L 
Sbjct: 60  FELCKQIRP---LVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHLR 116

Query: 235 R 233
           R
Sbjct: 117 R 117



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>LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
            (EC 3.1.3.-)
          Length = 859

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            K+LLVEDN  N  +L     +   +V  A DG   ++       DLILMD  LP + G E
Sbjct: 736  KVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLSDTTYDLILMDNQLPHLGGIE 795

Query: 409  ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
             T +++ +  L  TP+ A TA       +  +AAG +    KPI+
Sbjct: 796  TTHEIRQNLRL-GTPIYACTADTAKETSDAFMAAGANYVMLKPIK 839



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>CHEY_LISMO (P0A4H5) Chemotaxis protein cheY|
          Length = 119

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMD 419
           M K+L+V+D      M+   +    FEVV  A +G   V      +PD++ +D+++P MD
Sbjct: 1   MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDIVTLDITMPEMD 60

Query: 418 GWEATRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           G EA  Q+ A DP  +     A+    M  D   AI  G  D+  KP +  R+L  +
Sbjct: 61  GLEALAQIMAKDPSAKVIMCSAMGQQGMVVD---AIKKGAKDFIVKPFQADRVLEAL 114



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>CHEY_LISIN (P0A4H6) Chemotaxis protein cheY|
          Length = 119

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDTARREQPDLILMDMSLPVMD 419
           M K+L+V+D      M+   +    FEVV  A +G   V      +PD++ +D+++P MD
Sbjct: 1   MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDIVTLDITMPEMD 60

Query: 418 GWEATRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           G EA  Q+ A DP  +     A+    M  D   AI  G  D+  KP +  R+L  +
Sbjct: 61  GLEALAQIMAKDPSAKVIMCSAMGQQGMVVD---AIKKGAKDFIVKPFQADRVLEAL 114



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>NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein|
          Length = 469

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 32/121 (26%), Positives = 56/121 (46%)
 Frame = -2

Query: 574 EDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL 395
           +D+   W +L R LT  G        G   +D    + PD++L D+ +P MDG    +Q+
Sbjct: 11  DDSSIRW-VLERALTGAGLSCTTFESGNEVLDALTTKTPDVLLSDIRMPGMDGLALLKQI 69

Query: 394 KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 215
           K    +   PVI +TAH+       A   G  DY  KP ++   ++ + + +     +++
Sbjct: 70  KQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAISHYQEQQQ 127

Query: 214 P 212
           P
Sbjct: 128 P 128



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>SP0A_MOOTA (P52941) Stage 0 sporulation protein A homolog|
          Length = 256

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVV--LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+L+ +DN +  ++L      +   V+  +AH+G   ++  + ++PD++++D+ +P +DG
Sbjct: 5   KVLIADDNREFCEVLEEYFNEQEDFVLSGVAHNGQETLELIQEQEPDIVILDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +L+      +  ++ LTA    S   +++  G D Y  KP +L  L +++ QL
Sbjct: 65  IGVLEKLQVLNFEPRPKIVILTALGQESMTMRSVELGADYYILKPFDLEVLGNRLRQL 122



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>CHEY_THEMA (Q56312) Chemotaxis protein cheY|
          Length = 120

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           ++L+V+D      ML   +T+ G+EV   A +G   V+  +  +PD++ MD+++P M+G 
Sbjct: 4   RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGI 63

Query: 412 EATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
           +A ++ +K DP  +     A+   AM  +   AI AG  D+  KP +  R++  +
Sbjct: 64  DAIKEIMKIDPNAKIIVCSAMGQQAMVIE---AIKAGAKDFIVKPFQPSRVVEAL 115



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>SP0A_CLOPA (P52940) Stage 0 sporulation protein A homolog|
          Length = 273

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVV--LAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           +L+ +DN++  ++L+  L  +   VV  +A DG   +     ++PDL+++D+ +P MDG 
Sbjct: 8   VLIADDNKEFCNILNDYLLNQSDIVVVGIAKDGIEALKLIEEKKPDLVILDIIMPNMDGL 67

Query: 412 EATRQLKADPELQQTP-VIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
               +L A+  +   P VI L+A       ++AI  G D Y  KP ++     +I Q+
Sbjct: 68  VVLEKL-ANINIDPVPNVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQM 124



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>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)|
          Length = 677

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+ +D+E N  +L R L + G +V+  +     +D    E  D +++D+ +P M+G +
Sbjct: 414 RMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLD 473

Query: 409 ATRQLKADPE--LQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
             +QL+      ++ TPV+ L+A            AG   +  KP+   +LL  +A L
Sbjct: 474 MLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADL 531



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>PILR_PSEAE (Q00934) Type 4 fimbriae expression regulatory protein pilR|
          Length = 445

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 37/117 (31%), Positives = 56/117 (47%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           K L+V+D  D  ++L   L R   +   A +     +   RE  DL L DM LP   G +
Sbjct: 5   KALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLD 64

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
             + ++      QTPV  +TA+       +A+ AG  D+ TKP++L RL   +A  L
Sbjct: 65  LVQYIQQ--RHPQTPVAMITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATAL 119



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>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC|
            2.7.13.3) (Mcs4-associated kinase 2) (His-Asp
            phosphorelay kinase phk1)
          Length = 2310

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
 Frame = -2

Query: 583  LLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQ---PDLILMDMSLPVMDGW 413
            L+ EDN     +L+++L+  GF+V  A DG   V     +Q     +I  D  +P+ DG 
Sbjct: 2182 LIAEDNLIARKLLTKQLSNLGFQVHAAVDGVELVKMYEAKQFGFYSVIFADYHMPIRDGA 2241

Query: 412  EATRQLKADPELQQT----PVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
            EA   ++A           PVIALTA    S +++ +  G + Y TKP    +L++ + +
Sbjct: 2242 EAVMDIRAYERENNCSTPIPVIALTADIQKSAKQRCLEVGMNFYLTKPFTQKQLVNAVRE 2301

Query: 244  --LLER 233
              LLE+
Sbjct: 2302 FVLLEK 2307



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>CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog|
          Length = 130

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL-AHDGAAGVDT-ARREQPDLILMDMSLPVMDG 416
           K+L+V+D+     ++   LTR G + VL A  G    D   + E   +++ D ++P M+G
Sbjct: 2   KLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNEDVKVLITDWNMPEMNG 61

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            E  ++++A+ + +  P+I +T     ++   A+ AG ++Y  KP     L  K+  +L
Sbjct: 62  LELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDVL 120



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>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)|
          Length = 677

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           ++L+ +D+E N  +L R L + G +V+  +     +D    E  D +++D+ +P M+G +
Sbjct: 414 RMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLD 473

Query: 409 ATRQLKADPE--LQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
             +QL+      ++ TPV+ L+A            AG   +  KP+   +LL  +A L
Sbjct: 474 MLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKLLDTLADL 531



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>CSSR_BACSU (O32192) Transcriptional regulatory protein cssR|
          Length = 225

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQ---PDLILMDMSLPVMDG 416
           I LVED ++  ++L++ L  +G+ +     G    + AR++    P L ++D+ LP  DG
Sbjct: 5   IYLVEDEDNLNELLTKYLENEGWNITSFTKG----EDARKKMTPSPHLWILDIMLPDTDG 60

Query: 415 WEATRQLKA-DPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
           +   +++KA DP++   PVI ++A     DR   +  G +DY +KP     L+ ++ +LL
Sbjct: 61  YTLIKEIKAKDPDV---PVIFISARDADIDRVLGLELGSNDYISKPFLPRELIIRVQKLL 117

Query: 238 E 236
           +
Sbjct: 118 Q 118



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>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            ++L+V+D++ N  +L ++L   G  VV A  G A +        D+++ D ++P ++G+E
Sbjct: 974  RVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNMPGINGYE 1033

Query: 409  ATRQLKAD---PELQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
              R+++A    P   +T  I    TA A   + ++  AAG DD   KPI +  L  ++ +
Sbjct: 1034 LARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNE 1093

Query: 244  LLER 233
               R
Sbjct: 1094 AAAR 1097



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>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
 Frame = -2

Query: 589  KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
            ++L+V+D++ N  +L ++L   G  VV A  G A +        D+++ D ++P ++G+E
Sbjct: 974  RVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVITDCNMPGINGYE 1033

Query: 409  ATRQLKAD---PELQQTPVI--ALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQ 245
              R+++A    P   +T  I    TA A   + ++  AAG DD   KPI +  L  ++ +
Sbjct: 1034 LARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNE 1093

Query: 244  LLER 233
               R
Sbjct: 1094 AAAR 1097



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>NTRC_ECOLI (P0AFB8) Nitrogen regulation protein NR(I)|
          Length = 469

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 57/121 (47%)
 Frame = -2

Query: 574 EDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL 395
           +D+   W +L R L   G       +GA  ++    + PD++L D+ +P MDG    +Q+
Sbjct: 11  DDSSIRW-VLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQI 69

Query: 394 KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 215
           K    +   PVI +TAH+       A   G  DY  KP ++   ++ + + +     +++
Sbjct: 70  KQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQ 127

Query: 214 P 212
           P
Sbjct: 128 P 128



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>NTRC_ECO57 (P0AFB9) Nitrogen regulation protein NR(I)|
          Length = 469

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 57/121 (47%)
 Frame = -2

Query: 574 EDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL 395
           +D+   W +L R L   G       +GA  ++    + PD++L D+ +P MDG    +Q+
Sbjct: 11  DDSSIRW-VLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQI 69

Query: 394 KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 215
           K    +   PVI +TAH+       A   G  DY  KP ++   ++ + + +     +++
Sbjct: 70  KQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQ 127

Query: 214 P 212
           P
Sbjct: 128 P 128



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>LUXO_VIBPA (Q87MX7) Regulatory protein luxO|
          Length = 453

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = -2

Query: 580 LVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATR 401
           +VED      +    LT  G ++ +   G   +++     PDLIL+D+ LP M G +   
Sbjct: 1   MVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLH 60

Query: 400 QL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            + K+ P++   P+I +TAH       +A+  G  D+  KP E  RL
Sbjct: 61  AVKKSHPDV---PIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104



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>LUXO_VIBHA (P54299) Luminescence regulatory protein luxO|
          Length = 453

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = -2

Query: 580 LVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATR 401
           +VED      +    LT  G ++ +   G   +++     PDLIL+D+ LP M G +   
Sbjct: 1   MVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLH 60

Query: 400 QL-KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            + K+ P++   P+I +TAH       +A+  G  D+  KP E  RL
Sbjct: 61  AVKKSHPDV---PIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRL 104



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>HNR_SHIFL (P0AEV3) Protein hnr|
          Length = 337

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED +    +L    +  G   VLA DG   ++      PDL++ D+++P M+G +
Sbjct: 9   QILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLK 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
               ++   +  QTPV+ ++A    +D  KA+  G +D   KP++
Sbjct: 69  LLEHIRNRGD--QTPVLVISATENMADIAKALRLGVEDVLLKPVK 111



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>HNR_ECOLI (P0AEV1) Protein hnr|
          Length = 337

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED +    +L    +  G   VLA DG   ++      PDL++ D+++P M+G +
Sbjct: 9   QILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLK 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
               ++   +  QTPV+ ++A    +D  KA+  G +D   KP++
Sbjct: 69  LLEHIRNRGD--QTPVLVISATENMADIAKALRLGVEDVLLKPVK 111



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>HNR_ECO57 (P0AEV2) Protein hnr|
          Length = 337

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +IL+VED +    +L    +  G   VLA DG   ++      PDL++ D+++P M+G +
Sbjct: 9   QILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLK 68

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIE 275
               ++   +  QTPV+ ++A    +D  KA+  G +D   KP++
Sbjct: 69  LLEHIRNRGD--QTPVLVISATENMADIAKALRLGVEDVLLKPVK 111



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>SP0A_BACSU (P06534) Stage 0 sporulation protein A|
          Length = 267

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLT-RKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ + +DN +   +LS  +  ++  EV+ +A++G   +   + + PD++++D+ +P +DG
Sbjct: 5   KVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +L+     +Q  VI LTA       +KA+  G   +  KP ++  L+  I Q+
Sbjct: 65  LAVLERLRESDLKKQPNVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQV 122



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>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 849

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +L+V+D E    ++   L + G   + A++G   V+  +    DLILMD+ +PVM+G++A
Sbjct: 723 VLIVDDKEVQRALVQMYLNQLGVNSLQANNGENAVEVFKANHVDLILMDVQMPVMNGFDA 782

Query: 406 TRQLKADPELQ-QTPVIALTAHA 341
           ++++K   EL  QTP++AL+  +
Sbjct: 783 SQRIK---ELSPQTPIVALSGES 802



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>LUXO1_VIBCH (Q9KT84) Regulatory protein luxO|
          Length = 455

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 30/106 (28%), Positives = 50/106 (47%)
 Frame = -2

Query: 580 LVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATR 401
           +VED      +    LT    ++ +   G   +++  R +PDLIL+D+ LP M G +   
Sbjct: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60

Query: 400 QLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
            +K   +    P++ +TAH       +A+  G  D+  KP E  RL
Sbjct: 61  AVK--EKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRL 104



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>NTRC_PROVU (P28787) Nitrogen regulation protein NR(I)|
          Length = 473

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 33/121 (27%), Positives = 56/121 (46%)
 Frame = -2

Query: 574 EDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL 395
           +D+   W +L R +TR+G            +     EQPD++L D+ +P MDG    + +
Sbjct: 11  DDSSIRW-VLERAITREGMLCRAFEHANDVLKALNSEQPDVLLSDIRMPDMDGLSLLKII 69

Query: 394 KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 215
           K   +    PVI +TAH+       A   G  DY  KP ++   L+ I + +     +++
Sbjct: 70  KE--QYPTLPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLALIERAITHYREQKQ 127

Query: 214 P 212
           P
Sbjct: 128 P 128



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>VRAR_STAHJ (Q4L7J5) Response regulator protein vraR|
          Length = 209

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +G +G D    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIEIVGEGESGKDAIAKAHELKPDLILMDLLMDDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L    V+ LT+     +  +A+ AG D Y  K
Sbjct: 63  GVEATTQIKKD--LPHIKVVMLTSFIEDKEVYRALDAGVDSYILK 105



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>CHEY_YEREN (Q93P00) Chemotaxis protein cheY|
          Length = 128

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           + L+V+D      ++   L   GF  V  A DG   ++  R    D ++ D ++P MDG 
Sbjct: 6   RFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRTGGFDFVVSDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           +  + ++AD  L   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  DLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)|
          Length = 539

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 39/117 (33%), Positives = 57/117 (48%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           +ILLVED+E +  M  + LT    +V +A DG   V+ A     DLILMD  LP +DG  
Sbjct: 369 RILLVEDDELSRRMTIKFLTSFDCQVDVAVDGIGAVNKANAGGFDLILMDFILPNLDGLS 428

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            T  ++       TP++A+T++   +D       G  D   KP     LL  + + L
Sbjct: 429 VTCLIRQYD--HNTPILAITSNISMNDAVTYFNHGVTDLLVKPFTKLTLLQLLKKQL 483



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>VRAR_STAS1 (Q49YS9) Response regulator protein vraR|
          Length = 209

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDT---ARREQPDLILMDMSLPVMD 419
           K+L V+D+E     +S  L+ +  ++ +  +G +G D    A   +PDLILMD+ +  MD
Sbjct: 4   KVLFVDDHEMVRIGISSYLSTQS-DIDVVGEGKSGKDAIEKAHELKPDLILMDLLMDDMD 62

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTK 284
           G EAT Q+K D  L    V+ LT++   ++  +A+ +G D Y  K
Sbjct: 63  GVEATEQVKKD--LPNIKVVMLTSYIEDNEVYRALDSGVDSYILK 105



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>SP0A_BACME (P52932) Stage 0 sporulation protein A (Fragment)|
          Length = 212

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLT-RKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ LV+DN +   +L   ++ ++  EV+ +A++G   +   + + PD++++D+ +P +DG
Sbjct: 5   KVCLVDDNRELIGLLEDYISEQEDMEVIGVAYNGQECLSILKDKNPDVLVLDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                QLK   +     VI LTA       +KA+  G   +  KP ++  L++ I Q+
Sbjct: 65  LAVLGQLKEMKKENYPNVIMLTAFGQEDVTKKAVDLGAAYFILKPFDMENLVNHIRQV 122



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>PMRA_PECCC (Q70FH0) Transcriptional regulatory protein pmrA|
          Length = 222

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPD---------LILMDM 437
           K+L+VED+         +L ++G  + L+H+G A       ++ D         L+++D+
Sbjct: 2   KLLIVEDD---------KLLQEGLLLALSHEGYACDCAGTAKEADALIGSAHYSLVILDL 52

Query: 436 SLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLS 257
            LP  DG     + + +    Q PV+ LTA     DR   +  G DDY  KP  L  L +
Sbjct: 53  GLPDDDGLALLSRWRKNN--YQHPVLILTARDKVDDRVSGLDVGADDYLAKPFALTELQA 110

Query: 256 KIAQLLER 233
           ++  L+ R
Sbjct: 111 RVRALIRR 118



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>BASR_SALTY (P36556) Transcriptional regulatory protein basR/pmrA|
          Length = 222

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAA--GVDTARREQPDL-------ILMDM 437
           KIL+VED+          L  +G  +    +G A  GV TAR  +  L       +++D+
Sbjct: 2   KILIVEDDT---------LLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDL 52

Query: 436 SLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLS 257
            LP  DG     +++   +    PV+ LTAH   +DR   +  G DDY  KP  L  L +
Sbjct: 53  GLPDEDGLHFLTRIRQ--KKYTLPVLILTAHDTLNDRITGLDVGADDYLVKPFALEELHA 110

Query: 256 KIAQLLER*SHRRE 215
           +I  LL R +++ E
Sbjct: 111 RIRALLRRHNNQGE 124



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>TRPO_PSEAE (P24908) Putative transcriptional regulator|
          Length = 207

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           M+K+L+V+D+      +     R GF +V  A +GA  +  AR++ PDL ++D+ +P +D
Sbjct: 1   MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKID 60

Query: 418 GWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLL 260
           G E   +LK+      T V+ LT    A    + + AG   + +K   L  LL
Sbjct: 61  GLEVIARLKS--LKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKRENLSELL 111



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>SP0A_BREPA (P52929) Stage 0 sporulation protein A (Fragment)|
          Length = 212

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRK-GFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           ++LL +DN +   +L   ++ +    V+ +A++G   V   +   PD++++D+ +P +DG
Sbjct: 5   EVLLADDNREFVSLLEEYISSQYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHLDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
                Q++A     Q  +I LTA       +KA+  G   Y  KP ++  L  +I Q++
Sbjct: 65  LAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVLAQRIRQII 123



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>RSTA_ECOLI (P52108) Transcriptional regulatory protein rstA|
          Length = 242

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 33/115 (28%), Positives = 55/115 (47%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           M  I+ VED+ +   +++  L +   +V +   G    +T  RE PDL+L+D+ LP  DG
Sbjct: 4   MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDG 63

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKI 251
               R L+A       P++ LT+     +   A+  G  DY  K      LL+++
Sbjct: 64  MTICRDLRAK---WSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARL 115



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>CHEY_SALTY (P0A2D5) Chemotaxis protein cheY|
          Length = 128

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      I+ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>CHEY_SALTI (P0A2D6) Chemotaxis protein cheY|
          Length = 128

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      I+ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY|
          Length = 128

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      ++ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLGKIFEK 125



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>SP0A_CLOAB (P58253) Stage 0 sporulation protein A homolog|
          Length = 281

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVV--LAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           +L+ +DN++  ++L+  L  +   +V  +A DG   +     ++PDL+++D+ +P +DG 
Sbjct: 8   VLIADDNKEFCNILNDYLLNQSDMIVVGIAKDGVEALKLIENKKPDLVVLDIIMPRLDGL 67

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
               +L          +I L+A       ++AI  G D Y  KP ++    ++I ++
Sbjct: 68  GVLEKLNNKDAENLPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTNRIREM 124



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>SP0A_CLOBE (P52936) Stage 0 sporulation protein A homolog (Fragment)|
          Length = 223

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVV--LAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           +L+ +DN++   +L+  L  +   VV  +A DG+  ++     +PDL+++D+ +P +DG 
Sbjct: 8   VLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGSEALELIVERKPDLVILDIIMPHLDGL 67

Query: 412 EATRQLKADPELQQTP-VIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
               +L    +L++ P +I L+A       ++AI  G D Y  KP ++     +I ++
Sbjct: 68  GVLEKLNT-MQLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREM 124



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>CHEB_RHILO (Q98PD1) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 339

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVV--LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           +I +V D     ++L R +   G   V  +A +G   V+  RR+ PDLILMD+++PVMDG
Sbjct: 2   RIGVVNDMPMAVELLRRLVLSTGEHQVAWIATNGREAVEVCRRDLPDLILMDLAMPVMDG 61

Query: 415 WEATRQLKAD 386
            EATR++ A+
Sbjct: 62  VEATRRIMAE 71



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>CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY|
          Length = 128

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           + L+V+D      ++   L   GF  V  A DG   ++  R    D ++ D ++P MDG 
Sbjct: 6   RFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           +  + ++ D  L   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  DLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>CHEY_SHIFL (P0AE69) Chemotaxis protein cheY|
          Length = 128

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      ++ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>CHEY_ECOLI (P0AE67) Chemotaxis protein cheY|
          Length = 128

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      ++ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>CHEY_ECO57 (P0AE68) Chemotaxis protein cheY|
          Length = 128

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      ++ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>ARCA_HAEIN (P44918) Aerobic respiration control protein arcA homolog|
          Length = 236

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 36/119 (30%), Positives = 55/119 (46%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+VED     + L      +G++V  A +G            +L++MD++LP  +G  
Sbjct: 5   KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             R+L+ +  L   P+I LT      D+   +  G DDY TKP     L  +   LL R
Sbjct: 65  LARELREELSL---PLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120



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>CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog|
          Length = 124

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLA--HDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+L+V+D+     ++   L+R G+E VL   H   A           +++ D ++P M+G
Sbjct: 2   KLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNG 61

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            +  ++++AD   ++ P+I +T     ++   A+ AG ++Y  KP     L  K+  +L
Sbjct: 62  LDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 120



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>CCDB_BACSU (P45709) Protein ccdB|
          Length = 120

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMD 419
           MT++L+V+D +     +   L    + +   A DG    D  ++ +PDL+ MD+++PV +
Sbjct: 1   MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKN 60

Query: 418 GWEATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
           G +A R  L  DP+ +   VI  TA        +AI  G  D+  KP E  ++L  ++++
Sbjct: 61  GIKALRDILTFDPKAK---VIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRV 117

Query: 241 L 239
           +
Sbjct: 118 M 118



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>CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY|
          Length = 128

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFE-VVLAHDGAAGVDTARREQPDLILMDMSLPVMDGW 413
           K L+V+D      ++   L   GF  V  A DG   ++  +      ++ D ++P MDG 
Sbjct: 6   KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQAGGYGFVISDWNMPNMDGL 65

Query: 412 EATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
           E  + ++AD  +   PV+ +TA A   +   A  AG   Y  KP     L  K+ ++ E+
Sbjct: 66  ELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125



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>VANR_ENTFC (Q06239) Regulatory protein vanR|
          Length = 231

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 29/119 (24%), Positives = 56/119 (47%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D  +  D++   L  + + V   +     ++   + + DL ++D+ LP   G  
Sbjct: 4   KILIVDDEHEIADLVELYLKNENYTVFKYYTAKEALECIDKSEIDLAILDIMLPGTSGLT 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
             ++++   +    P+I LT      D+   +  G DDY TKP     L++++   L R
Sbjct: 64  ICQKIR---DKHTYPIIMLTGKDTEVDKITGLTIGADDYITKPFRPLELIARVKAQLRR 119



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>CHEB_DESPS (Q6AJV3) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 364

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTR-KGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           ++L+V+D      ++S  L    G EV+ +AH+G   +D  R  +PDLI +D+ +PVM+G
Sbjct: 5   RVLVVDDTILYRKIVSDLLREIPGIEVIGVAHNGKIALDKIRLSKPDLITLDIEMPVMNG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIA 248
            E    LK  P+     +++      +    KA+  G  D+  KP E     +K A
Sbjct: 65  IELLEHLKDIPDAPGAVMLSTLTSDGSRMTMKALELGAFDFILKPQEKTPAANKAA 120



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>RCP1_SYNY3 (Q55169) Response regulator rcp1|
          Length = 147

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGF--EVVLAHDGAAGVDTARRE-------QPDLILMDMS 434
           ILLVED++ +  ++   L       E+++  DG A +   +++       +P+LIL+D++
Sbjct: 11  ILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLN 70

Query: 433 LPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSK 254
           LP  DG E   ++K +P+L++ PV+ LT      D   +     + Y TK   L  L   
Sbjct: 71  LPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKM 130

Query: 253 I 251
           +
Sbjct: 131 V 131



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>CHEY_HELPY (P71403) Chemotaxis protein cheY homolog|
          Length = 124

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLA--HDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+L+V+D+     ++   L+R G+E VL   H   A           +++ D ++P M+G
Sbjct: 2   KLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNG 61

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLL 239
            +  +++++D   ++ P+I +T     ++   A+ AG ++Y  KP     L  K+  +L
Sbjct: 62  LDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 120



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>LIAR_BACSU (O32197) Sensory transduction protein liaR|
          Length = 211

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRL-TRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVM 422
           M ++LL++D+E     L+  L  +   EV+  A DG+ GV  A    PD+ILMD+ +  M
Sbjct: 1   MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60

Query: 421 DGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDY---DTKPIEL------- 272
           DG EAT+Q+    EL    +I LT+          I AG   Y    +K  E+       
Sbjct: 61  DGIEATKQICR--ELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAA 118

Query: 271 ----PRLLSKIA-QLLER*SHRREPWLP 203
               P+L SK+A ++L R  H  E  LP
Sbjct: 119 SKGEPKLESKVAGKVLSRLRHSGENALP 146



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>SP0A_BACST (P52934) Stage 0 sporulation protein A|
          Length = 259

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRK-GFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ + +DN +   +L   ++ +   EV+  A++G   +     ++PD++L+D+ +P +DG
Sbjct: 4   KVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDG 63

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +++A  E  Q  VI LTA       +KA+  G   +  KP ++  L   I Q+
Sbjct: 64  LAVLERIRAGFE-HQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQV 120



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>CHEB_VIBF1 (Q5E3S1) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 376

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTR-----KGFEVV-LAHDGAAGVDTARREQPDLILMDMSLP 428
           K+L+V+D+        RR++         EV+ +A +G   V+ A+  +PD+I MD+ +P
Sbjct: 4   KVLVVDDSS----FFRRRVSEIINSDPRLEVIDVAVNGKEAVEKAKSLKPDVITMDIEMP 59

Query: 427 VMDGWEATRQ-LKADPELQQTPVIALTA--HAMASDREKAIAAGCDDYDTKPIE------ 275
           VMDG  A R+ +KA P    TP +  ++  H  A     A+ AG  D+  K  E      
Sbjct: 60  VMDGISAVREIMKACP----TPTLMFSSLTHDGAKATLDALDAGALDFLPKKFEDIARNR 115

Query: 274 ---LPRLLSKIAQLLER*SHRREPWLPP*PSTAMKLRRQFLLFGVGTTFTAIAAISLSDV 104
              +  L  +IA++  + S  R P L    ++ ++ R         TT TA +A++ S V
Sbjct: 116 DEAVSLLQKRIAEIARKKSFMRRPVLSSQSTSTVESR-------TATTRTATSALTASPV 168



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>RSSB_SERMA (Q8GP20) Swarming motility regulation protein rssB|
          Length = 219

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 36/118 (30%), Positives = 55/118 (46%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           ILLVED+      L R L   GF +      A   +       DL+L+D++LP  DG + 
Sbjct: 3   ILLVEDDLQLGKALCRALELAGFNLCWVRLIADAENKLSSGGFDLMLLDLTLPDGDGLQK 62

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
               +A    Q  P+I LTA         ++ +G +D+  KP  LP L+S++  +  R
Sbjct: 63  LIAWRAAG--QNIPIIILTARDRIESLVNSLDSGANDFLAKPFALPELISRVKAVNRR 118



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>SP0F_BACTK (P52942) Sporulation initiation phosphotransferase F (EC 2.7.-.-)|
           (Stage 0 sporulation protein F)
          Length = 122

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 29/109 (26%), Positives = 55/109 (50%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWE 410
           KIL+V+D      +L     ++G++   A +G   +D  +++ PDL+++DM +P MDG E
Sbjct: 4   KILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVKKDNPDLVVLDMKIPGMDGIE 63

Query: 409 ATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRL 263
             +  K   E     VI ++A+      ++A   G   +  KP ++  +
Sbjct: 64  IFKACKEIDE--SIKVILMSAYGELDMIQEAKDLGALMHFAKPFDIDEI 110



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>GACA_PSEU2 (Q52376) Response regulator gacA (Global activator)|
          Length = 214

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRK-----GFEVV-LAHDGAAGVDTARREQPDLILMDMS 434
           M K+L+V+D+    D++   +TR      G +VV  A  G   +  AR  +PD++LMD+ 
Sbjct: 1   MIKVLVVDDH----DLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVK 56

Query: 433 LPVMDGWEATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLS 257
           +P + G EATR+ L++ P+++   V+A+T         + + AG   Y TK   L  ++ 
Sbjct: 57  MPGIGGLEATRKMLRSHPDIK---VVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQ 113

Query: 256 KI 251
            I
Sbjct: 114 AI 115



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>NTRC_SALTY (P41789) Nitrogen regulation protein NR(I)|
          Length = 469

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 30/121 (24%), Positives = 55/121 (45%)
 Frame = -2

Query: 574 EDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQL 395
           +D+   W +L R L   G       +G   +     + PD++L D+ +P MDG    +Q+
Sbjct: 11  DDSSIRW-VLERALAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLALLKQI 69

Query: 394 KADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*SHRRE 215
           K    +   PVI +TAH+       A   G  DY  KP ++   ++ + + +     +++
Sbjct: 70  KQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQ 127

Query: 214 P 212
           P
Sbjct: 128 P 128



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>ARCA_SHIFL (P0A9Q4) Aerobic respiration control protein arcA|
          Length = 238

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+VED     + L      +G++V  A DGA           +L++MD++LP  +G   
Sbjct: 6   ILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLL 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+L+   E     ++ LT      D+   +  G DDY TKP     L  +   LL R
Sbjct: 66  ARELR---EQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120



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>ARCA_ECOLI (P0A9Q1) Aerobic respiration control protein arcA (Dye resistance|
           protein)
          Length = 238

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+VED     + L      +G++V  A DGA           +L++MD++LP  +G   
Sbjct: 6   ILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLL 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+L+   E     ++ LT      D+   +  G DDY TKP     L  +   LL R
Sbjct: 66  ARELR---EQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120



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>ARCA_ECOL6 (P0A9Q2) Aerobic respiration control protein arcA|
          Length = 238

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+VED     + L      +G++V  A DGA           +L++MD++LP  +G   
Sbjct: 6   ILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLL 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+L+   E     ++ LT      D+   +  G DDY TKP     L  +   LL R
Sbjct: 66  ARELR---EQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120



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>ARCA_ECO57 (P0A9Q3) Aerobic respiration control protein arcA|
          Length = 238

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           IL+VED     + L      +G++V  A DGA           +L++MD++LP  +G   
Sbjct: 6   ILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLL 65

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER 233
            R+L+   E     ++ LT      D+   +  G DDY TKP     L  +   LL R
Sbjct: 66  ARELR---EQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120



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>RPFG_XANC8 (Q4UU85) Response regulator rpfG|
          Length = 378

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = -2

Query: 457 DLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPI 278
           DL+L+D  +P MDG E  R+L+  P  +  P+I +T       R+ A+ AG  D+  KPI
Sbjct: 75  DLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDFLVKPI 134

Query: 277 ELPRLLSKIAQLLE 236
               L ++ + LL+
Sbjct: 135 RPRELRARCSNLLQ 148



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>CHEB_SYMTH (Q67P67) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 362

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL--AHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           ++L+V+D+     +L+  L       V+  A DG  G++   + QPD++ +D+ +P +DG
Sbjct: 10  RVLVVDDSAFMRKVLTELLESDPLITVVGTARDGQDGLEKVLQLQPDVVTLDIEMPRLDG 69

Query: 415 WEATRQLKADPELQQTPVIALTAHAM--ASDREKAIAAGCDDYDTKP 281
           +   R++ A    + TPV+ +++H    A    +A+A G  D+  KP
Sbjct: 70  YGTLREIMA---RRPTPVVMVSSHTREGAEATIRALALGAVDFVAKP 113



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>DCTR_BACSU (P96602) Probable C4-dicarboxylate response regulator dctR|
          Length = 226

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
 Frame = -2

Query: 589 KILLVEDN----EDNWDMLSRRLTRKGFEV-VLAHDGAAGVDTARREQPDLILMDMSLPV 425
           K+LL+ED+    E N D ++   T KG  V   A +G  G+   + EQPDL+++D+ +P 
Sbjct: 7   KVLLIEDDPMVQEVNKDFIT---TVKGVTVCATAGNGEEGMKLIKEEQPDLVILDVYMPK 63

Query: 424 MDGWEATRQLKADPELQQTPVIALTAHAMASDREK---AIAAGCDDYDTKPIELPRL 263
            DG +  ++++   +  +  VI ++A   A D+E     +  G  DY  KP +L R+
Sbjct: 64  KDGIKTLQEIR--KQKLEVDVIVVSA---AKDKETISLMLQNGAVDYILKPFKLERM 115



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>ACTR_RHIME (Q52913) Acid tolerance regulatory protein actR|
          Length = 194

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 37/138 (26%), Positives = 64/138 (46%)
 Frame = -2

Query: 586 ILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGAAGVDTARREQPDLILMDMSLPVMDGWEA 407
           +L+V+D+      L+R +  +GF V +A   A G+  A+   P   ++D+ L    G + 
Sbjct: 25  LLIVDDDTAFLRRLARAMEARGFAVEIAESVAEGIAKAKTRPPKHAVIDLRLSDGSGLDV 84

Query: 406 TRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQLLER*S 227
              ++       T +I LT +   +    A+  G  DY  KP +   +L   A L++R  
Sbjct: 85  IEAIRG--RRDDTRMIVLTGYGNIATAVNAVKLGALDYLAKPADADDIL---AALIQRPG 139

Query: 226 HRREPWLPP*PSTAMKLR 173
            R EP  P  P +A ++R
Sbjct: 140 ERVEP--PENPMSADRVR 155



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>GACA_PSEVI (P95582) Response regulator gacA (Global activator)|
          Length = 214

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTRK-----GFEVV-LAHDGAAGVDTARREQPDLILMDMS 434
           M ++L+V+D+    D++   +TR      G +VV  A  G   +  AR  +PD++LMD+ 
Sbjct: 1   MIRVLVVDDH----DLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVK 56

Query: 433 LPVMDGWEATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLS 257
           +P + G EATR+ L++ P+++   V+A+T         + + AG   Y TK   L  ++ 
Sbjct: 57  MPGIGGLEATRKLLRSHPDIK---VVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQ 113

Query: 256 KI 251
            I
Sbjct: 114 AI 115



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>GACA_PSEAE (Q51373) Response regulator gacA (Global activator)|
          Length = 214

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = -2

Query: 595 MTKILLVEDNEDNWDMLSRRLTR-----KGFEVVLAHD-GAAGVDTARREQPDLILMDMS 434
           M K+L+V+D+    D++   +TR     +G +VV   D G   +  AR  +PD++LMD+ 
Sbjct: 1   MIKVLVVDDH----DLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVK 56

Query: 433 LPVMDGWEATRQ-LKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLS 257
           +P + G EATR+ L++ P+++   V+ +T         + + AG   Y TK   L  ++ 
Sbjct: 57  MPGIGGLEATRKLLRSQPDIK---VVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQ 113

Query: 256 KIAQL 242
            I Q+
Sbjct: 114 AIRQV 118



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>CHEV_BACSU (P37599) Chemotaxis protein cheV|
          Length = 303

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVLAHDGA----------AGVDTARREQPDLILMD 440
           K+++VED+     +L   L   G+  + + +            A  +T   +Q D+I+ D
Sbjct: 176 KLIIVEDSPLLMRLLQDELKEAGYNNIASFENGKEAYEYIMNLAENETDLSKQIDMIITD 235

Query: 439 MSLPVMDGWEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLL 260
           + +P MDG   T+ LK +P+    PV+  ++      R +    G D+  +KP E+  L+
Sbjct: 236 IEMPKMDGHRLTKLLKENPKSSDVPVMIFSSLITDDLRHRGEVVGADEQISKP-EISDLI 294

Query: 259 SKI 251
            K+
Sbjct: 295 KKV 297



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>SP0A_BACCI (P52931) Stage 0 sporulation protein A (Fragment)|
          Length = 210

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRL-TRKGFEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+ +V+DN +   +L   +  +   EV+ +AH+G   ++   + +PD++++D+ +P +DG
Sbjct: 5   KVCIVDDNRELVGLLEEYIDAQDDMEVIGVAHNGQECLELVEQLEPDVMVLDIIMPHIDG 64

Query: 415 WEATRQLKADPELQQTPVIALTAHAMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
                +++         VI LTA       +KA+  G   +  KP ++  L S I Q+
Sbjct: 65  LAVLERMR-QMNKPMPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMEYLASHIRQV 121



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>CHEB1_RALEJ (Q46V28) Chemotaxis response regulator protein-glutamate|
           methylesterase 1 (EC 3.1.1.61)
          Length = 341

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = -2

Query: 520 FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDGWEATRQLKADPELQQTPVIALTAH 344
           FE+V +A DG   V  A    PD+ILMD+ +PVMDG EATR++ A       P++ +T  
Sbjct: 26  FEIVWVAGDGEQAVQLAASHTPDVILMDLLMPVMDGVEATRRIMA---ATPCPIVVVTTD 82

Query: 343 AMASDREKAIAAGCDDYDTKPIELPRLLSKIAQL 242
              +  +   A G    D   ++ P L    A+L
Sbjct: 83  LGRNATQVFDAMGHGAIDA--VDTPTLTESDAKL 114



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>CHEB1_VIBVY (Q7MIQ5) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 376

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKG-FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+L+V+D+      +S  +  +   EV+ +A +G   V+ A+R +PD+I MD+ +PVMDG
Sbjct: 4   KVLVVDDSSFFRRRVSEIINAESRLEVIDVAVNGKEAVEKAKRLKPDVITMDIEMPVMDG 63

Query: 415 WEATRQLKADPELQQTPVIALTA--HAMASDREKAIAAGCDDYDTKPIE 275
             A R++ A      TP++  ++  H  A     A+ AG  D+  K  E
Sbjct: 64  ISAVREIMAS---VPTPILMFSSLTHDGAKATLDALDAGALDFLPKKFE 109



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>CHEB1_VIBVU (Q8DB67) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 376

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKG-FEVV-LAHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           K+L+V+D+      +S  +  +   EV+ +A +G   V+ A+R +PD+I MD+ +PVMDG
Sbjct: 4   KVLVVDDSSFFRRRVSEIINAESRLEVIDVAVNGKEAVEKAKRLKPDVITMDIEMPVMDG 63

Query: 415 WEATRQLKADPELQQTPVIALTA--HAMASDREKAIAAGCDDYDTKPIE 275
             A R++ A      TP++  ++  H  A     A+ AG  D+  K  E
Sbjct: 64  ISAVREIMAS---VPTPILMFSSLTHDGAKATLDALDAGALDFLPKKFE 109



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>CHEB3_PSESM (Q886S8) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 3 operon (EC 3.1.1.61)
          Length = 336

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
 Frame = -2

Query: 589 KILLVEDNEDNWDMLSRRLTRKGFEVVL--AHDGAAGVDTARREQPDLILMDMSLPVMDG 416
           KI +V D     + L R L  +    V+  A +GA  V  +  + PDLILMD+ +PVMDG
Sbjct: 2   KIAIVNDMPMAIEALRRALAFEPAHQVIWVAANGADAVQRSIEQTPDLILMDLIMPVMDG 61

Query: 415 WEATRQLKADPELQQTP--VIALTAHAMASDREKAIAAG---CDDYDTKPIELPRLLSKI 251
            EATR++ A     +TP  ++ +T     + R    A G    D  DT  I  P      
Sbjct: 62  VEATRRIMA-----ETPCAIVIVTVDREQNMRRVFEAMGHGALDVVDTPAIGGPNPREAA 116

Query: 250 AQLLER 233
           A LL +
Sbjct: 117 APLLRK 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,615,662
Number of Sequences: 219361
Number of extensions: 1917119
Number of successful extensions: 7828
Number of sequences better than 10.0: 493
Number of HSP's better than 10.0 without gapping: 7226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7636
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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