ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds 283 2e-73
2gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog m... 270 4e-69
3gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, com... 194 2e-46
4gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds 125 1e-25
5gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, com... 80 7e-12
6gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds 80 7e-12
7gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete... 56 1e-04
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 1e-04
9gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 56 1e-04
10gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 56 1e-04
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
12gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 56 1e-04
13dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
14emb|AJ295940.1|FPR295940 Festuca pratensis mRNA for beta expansi... 46 0.099
15gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, compl... 42 1.6
16gb|AC022439.5| Homo sapiens chromosome 5 clone RP11-184A13, comp... 42 1.6
17gb|AF097145.1|AF097145 Omaspides bistriata 12S small subunit rib... 42 1.6
18emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansi... 40 6.1
19gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosom... 40 6.1
20gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, com... 40 6.1
21emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 i... 40 6.1
22emb|AL033392.5|HS403M6 Human DNA sequence from clone RP3-403M6 o... 40 6.1
23gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.1
24emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on ch... 40 6.1
25emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA 40 6.1
26emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for t... 40 6.1
27emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete s... 40 6.1
28gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell... 40 6.1
29gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome ... 40 6.1
30emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 i... 40 6.1
31gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, com... 40 6.1
32gb|AC157756.1| Mus musculus 10 BAC RP24-377M12 (Roswell Park Can... 40 6.1
33gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 ... 40 6.1
34emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 i... 40 6.1
35gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, co... 40 6.1
36emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 ... 40 6.1

>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds
          Length = 1132

 Score =  283 bits (143), Expect = 2e-73
 Identities = 224/251 (89%)
 Strand = Plus / Minus

                                                                       
Query: 203 tagtacctagcaataacttaaaatccttcgatcctcgtaaatagggaacctccagatgac 262
           |||| ||| |||||||||||||| | || |||||||  ||||||||| | | | ||||||
Sbjct: 945 tagtgcctggcaataacttaaaaccattagatcctcacaaatagggatcatgctgatgac 886

                                                                       
Query: 263 accaaaatgattaactcggcatcgatcggagaagtgctcaggtaagccaatcaatagaac 322
           ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 885 accaaaatgattaactcggcatcgatcggagaagtacgcacgtaagccaatcaatagaac 826

                                                                       
Query: 323 tggatgttagaccagtaggctttggcctgctgccaatatgccgggatggcattgttggcc 382
           |||| ||| ||||||||||| | | || |||||||||| |||||||||||||||||||||
Sbjct: 825 tggaggttggaccagtaggcatggtccggctgccaataagccgggatggcattgttggcc 766

                                                                       
Query: 383 accagcatctttccggtgtcggtggcgatgcgtatggagaatggcccctgcagcgggcgg 442
           |||||| |||||||||| ||| ||| |||||| |||| ||||||||||||||||||||||
Sbjct: 765 accagcgtctttccggtatcgctggtgatgcggatggcgaatggcccctgcagcgggcgg 706

                      
Query: 443 ttggtgtccat 453
           |||||||||||
Sbjct: 705 ttggtgtccat 695



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 70/77 (90%), Gaps = 6/77 (7%)
 Strand = Plus / Minus

                                                                        
Query: 55   atcaggtatggaactg--atagtggccggggtagcacatggacggatgctactccacttg 112
            |||||| |||||||||  ||||||||||||||||||||||||    ||||||||||||||
Sbjct: 1132 atcaggcatggaactgcgatagtggccggggtagcacatgga----tgctactccacttg 1077

                             
Query: 113  cctagctccttacattt 129
            |||||||||||||||||
Sbjct: 1076 cctagctccttacattt 1060



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>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds
          Length = 1232

 Score =  270 bits (136), Expect = 4e-69
 Identities = 214/240 (89%)
 Strand = Plus / Minus

                                                                       
Query: 214 aataacttaaaatccttcgatcctcgtaaatagggaacctccagatgacaccaaaatgat 273
           |||||||||||||| ||||||| ||||||||||||| | ||| |||||||||||||||||
Sbjct: 964 aataacttaaaatcattcgatcatcgtaaatagggatcatcctgatgacaccaaaatgat 905

                                                                       
Query: 274 taactcggcatcgatcggagaagtgctcaggtaagccaatcaatagaactggatgttaga 333
           |||| | ||||||||||||||||| | || |||||| ||||| |||||||||| ||| ||
Sbjct: 904 taacccagcatcgatcggagaagtacgcacgtaagcaaatcagtagaactggaggttgga 845

                                                                       
Query: 334 ccagtaggctttggcctgctgccaatatgccgggatggcattgttggccaccagcatctt 393
           ||| ||||| | | ||||||||||||| |||||||||||||||||||| |||||| ||||
Sbjct: 844 ccaataggcatggtcctgctgccaataagccgggatggcattgttggcgaccagcgtctt 785

                                                                       
Query: 394 tccggtgtcggtggcgatgcgtatggagaatggcccctgcagcgggcggttggtgtccat 453
           |||||| ||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 784 tccggtatcgctggtgatgcggatggagaatggcccctgcaccgggcggttggtgtccat 725



 Score =  119 bits (60), Expect = 8e-24
 Identities = 106/120 (88%), Gaps = 6/120 (5%)
 Strand = Plus / Minus

                                                                        
Query: 12   catccatttgaattaatttataatttcgatttgatcacactctatcaggtatggaactg- 70
            |||||||||||||||||||||||  |  ||| ||||||||| ||||||| ||||||||| 
Sbjct: 1193 catccatttgaattaatttataagcttaattggatcacactttatcaggcatggaactgc 1134

                                                                        
Query: 71   -atagtggccggggtagcacatggacggatgctactccacttgcctagctccttacattt 129
             ||||||||||||||||||||||||    || ||||||||||||||||||||||||||||
Sbjct: 1133 gatagtggccggggtagcacatgga----tgatactccacttgcctagctccttacattt 1078



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>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds
          Length = 939

 Score =  194 bits (98), Expect = 2e-46
 Identities = 137/150 (91%)
 Strand = Plus / Minus

                                                                       
Query: 304 gtaagccaatcaatagaactggatgttagaccagtaggctttggcctgctgccaatatgc 363
           ||||||||||||||||||||||| ||| ||||||||||| | | || |||||||||| ||
Sbjct: 869 gtaagccaatcaatagaactggaggttggaccagtaggcatggtccggctgccaataagc 810

                                                                       
Query: 364 cgggatggcattgttggccaccagcatctttccggtgtcggtggcgatgcgtatggagaa 423
           ||||||||||||||||||||||||| |||||||||| ||| ||| |||||| |||| |||
Sbjct: 809 cgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgcggatggcgaa 750

                                         
Query: 424 tggcccctgcagcgggcggttggtgtccat 453
           ||||||||||||||||||||||||||||||
Sbjct: 749 tggcccctgcagcgggcggttggtgtccat 720



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 tcaggacacacaatcgacga 185
           ||||||||||||||||||||
Sbjct: 928 tcaggacacacaatcgacga 909



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>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds
          Length = 1078

 Score =  125 bits (63), Expect = 1e-25
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 311 aatcaatagaactggatgttagaccagtaggctttggcctgctgccaatatgccgggatg 370
           |||||||||||||||| ||| |||||||| || ||| || || |||| || |||||||||
Sbjct: 845 aatcaatagaactggacgttggaccagtaagcattgtccggccgccagtacgccgggatg 786

                                                                       
Query: 371 gcattgttggccaccagcatctttccggtgtcggtggcgatgcgtatggagaatggcccc 430
            ||||||||||||| ||| |||| |||| |||| ||| ||| || |||||||| ||||||
Sbjct: 785 acattgttggccacaagcgtcttcccggagtcgctggtgatacgcatggagaagggcccc 726

                                  
Query: 431 tgcagcgggcggttggtgtccat 453
           |||||||||||| ||||||||||
Sbjct: 725 tgcagcgggcggctggtgtccat 703



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>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
          Length = 1013

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 362 gccgggatggcattgttggccaccagcatctttccggtgtcggtggcgatgcgtatggag 421
           ||||||||| ||||||||||||||||| |||| |||| |||| ||| |||||| ||||||
Sbjct: 810 gccgggatgacattgttggccaccagcttcttgccggagtcgctggtgatgcgcatggag 751

                                           
Query: 422 aatggcccctgcagcgggcggttggtgtccat 453
           || |||||||| ||  || |||||| ||||||
Sbjct: 750 aagggcccctggaggcggtggttggagtccat 719



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>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
          Length = 1056

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 362 gccgggatggcattgttggccaccagcatctttccggtgtcggtggcgatgcgtatggag 421
           ||||||||| ||||||||||||||||| |||| |||| |||| ||| |||||| ||||||
Sbjct: 842 gccgggatgacattgttggccaccagcttcttgccggagtcgctggtgatgcgcatggag 783

                                           
Query: 422 aatggcccctgcagcgggcggttggtgtccat 453
           || |||||||| ||  || |||||| ||||||
Sbjct: 782 aagggcccctggaggcggtggttggagtccat 751



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>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds
          Length = 1210

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 409 gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
           |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 938 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 895



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 409    gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
              |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 169334 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 169291



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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 409  gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
            |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 6401 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 6358



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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 409    gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
              |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 103334 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 103291



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 409    gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
              |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 169334 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 169291



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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 409   gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
             |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 93332 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 93375



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>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full
           insert sequence
          Length = 1027

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 409 gatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 452
           |||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 746 gatgcggagggagaagggcccctgcagcgggtggttggtgtcca 703



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>emb|AJ295940.1|FPR295940 Festuca pratensis mRNA for beta expansin B1 (expB1 gene)
          Length = 1224

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 302 aggtaagccaatcaatagaactg 324
           |||||||||||||||||||||||
Sbjct: 868 aggtaagccaatcaatagaactg 846



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>gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, complete sequence
          Length = 130307

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     catttgaattaatttataatt 36
              |||||||||||||||||||||
Sbjct: 119462 catttgaattaatttataatt 119482



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>gb|AC022439.5| Homo sapiens chromosome 5 clone RP11-184A13, complete sequence
          Length = 134576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     catttgaattaatttataatt 36
              |||||||||||||||||||||
Sbjct: 119571 catttgaattaatttataatt 119551



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>gb|AF097145.1|AF097145 Omaspides bistriata 12S small subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 483

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  atttgaattaatttataattt 37
           |||||||||||||||||||||
Sbjct: 351 atttgaattaatttataattt 331



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>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene)
          Length = 1194

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 374 ttgttggccaccagcatctttccggtgtcggtggcgatgcgtatggagaatggcccctgc 433
           |||||||| || |||  ||| |||| |||| ||| |||||| |||||||||||| |||| 
Sbjct: 831 ttgttggcgacgagctgcttgccggagtcgctggtgatgcgcatggagaatggcgcctgg 772

                               
Query: 434 agcgggcggttggtgtccat 453
           ||  || |||||| ||||||
Sbjct: 771 agacggtggttggagtccat 752



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>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete
             sequence
          Length = 184128

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   aaagtagtacctagcaataa 218
             ||||||||||||||||||||
Sbjct: 18075 aaagtagtacctagcaataa 18056



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>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence
          Length = 218079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    aaagtagtacctagcaataa 218
              ||||||||||||||||||||
Sbjct: 117254 aaagtagtacctagcaataa 117235



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>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16,
             complete sequence
          Length = 91165

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    atccatttgaattaatttat 32
             ||||||||||||||||||||
Sbjct: 67726 atccatttgaattaatttat 67707



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>emb|AL033392.5|HS403M6 Human DNA sequence from clone RP3-403M6 on chromosome 6q24.1-25.3
             Contains part of the AKAP12 gene for A kinase (PRKA)
             anchor protein (gravin) 12, complete sequence
          Length = 86329

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cttcatccatttgaattaat 28
             ||||||||||||||||||||
Sbjct: 55823 cttcatccatttgaattaat 55842



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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 429     cctgcagcgggcggttggtg 448
               ||||||||||||||||||||
Sbjct: 3548740 cctgcagcgggcggttggtg 3548759



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>emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on chromosome 13 Contains 2
             novel genes, the UCHL3 gene for ubiquitin
             carboxyl-terminal esterase L3 (ubiquitin thiolesterase),
             the 5' end of the LMO7 gene for LIM domain only 7
             (KIAA0858) and 2 CpG islands, complete sequence
          Length = 183358

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 13    atccattt-gaattaatttataatttcgattt 43
             |||||||| ||||||||||||||||| |||||
Sbjct: 90495 atccatttagaattaatttataattttgattt 90526



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>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttataatttcgatttgatca 48
             ||||||||||||||||||||
Sbjct: 41566 ttataatttcgatttgatca 41547



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>emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for tRNA-Ser(UGA),
            tRNA-Gly(GCC), tRNA-Met(CAU), ORF701, ORF702 and ORF703
          Length = 3381

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   ttataatttcgatttgatca 48
            ||||||||||||||||||||
Sbjct: 1788 ttataatttcgatttgatca 1769



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>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 141662 tttgaattaatttataattt 141643



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>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168583

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 139358 tttgaattaatttataattt 139377



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>gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome 15, complete sequence
          Length = 196863

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    gaccagtaggctttggcctg 351
              ||||||||||||||||||||
Sbjct: 181178 gaccagtaggctttggcctg 181159



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>emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 in linkage group 10,
             complete sequence
          Length = 228624

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     cataaacttcatccatttgaattaattt 30
             ||||||||||| ||||||| ||||||||
Sbjct: 98523 cataaacttcagccatttgcattaattt 98496



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>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds
          Length = 1034

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 419 gagaatggcccctgcagcgggcgg 442
           ||||| ||||||||||||||||||
Sbjct: 846 gagaagggcccctgcagcgggcgg 823



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>gb|AC157756.1| Mus musculus 10 BAC RP24-377M12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180821

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    agatgacaccaaaatgatta 275
              ||||||||||||||||||||
Sbjct: 125506 agatgacaccaaaatgatta 125525



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>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete
              sequence
          Length = 283075

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 119551 tttgaattaatttataattt 119570



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>emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 in linkage group 10,
              complete sequence
          Length = 137433

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 3      cataaacttcatccatttgaattaattt 30
              ||||||||||| ||||||| ||||||||
Sbjct: 126876 cataaacttcagccatttgcattaattt 126849



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>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence
          Length = 228289

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   gaccagtaggctttggcctg 351
             ||||||||||||||||||||
Sbjct: 31122 gaccagtaggctttggcctg 31103



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>emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 in linkage group 10,
             complete sequence
          Length = 175059

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     cataaacttcatccatttgaattaattt 30
             ||||||||||| ||||||| ||||||||
Sbjct: 75447 cataaacttcagccatttgcattaattt 75420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,380,778
Number of Sequences: 3902068
Number of extensions: 3380778
Number of successful extensions: 65298
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65193
Number of HSP's gapped (non-prelim): 103
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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