>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 453 NSSAGLIPPGGASSDQGEPAPQGGAEHFGRRAQQPQDTPREPMTAH 316
           N+  G  PP G  S    PAP   A H  ++ QQPQ  P+     H
Sbjct: 455 NTHPGPFPPTGGQSTAHPPAP---AHHHHQQQQQPQPQPQPQQHHH 497

>SSXT_MOUSE (Q62280) SSXT protein (SYT protein) (Synovial sarcoma-associated|
           Ss18-alpha)
          Length = 418

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
 Frame = -2

Query: 465 HGQFNSSAGLIPPGGASSDQGEPAPQG-------GAEHFGRRAQQPQDTPRE 331
           H Q  S    +PPGGA   QG+ AP G       G+   G+R   P   P++
Sbjct: 207 HQQPPSQQYNMPPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQ 258

>RPTN_HUMAN (Q6XPR3) Repetin|
          Length = 784

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -2

Query: 423 GASSDQGEPAPQGGAEHFGRRAQQPQ-----DTPREPMTAHFLRRDR 298
           G SS  G+P  Q  + H+G+  +Q Q      T R+  ++H+ + DR
Sbjct: 374 GQSSHYGQPDTQDQSSHYGQTDRQDQSSHYGQTERQGQSSHYSQMDR 420



 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -2

Query: 423 GASSDQGEPAPQGGAEHFGRRAQQPQ-----DTPREPMTAHFLRRDR 298
           G SS  G+P  QG   H+G+  +Q Q      T R+  ++H+ + D+
Sbjct: 434 GQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDK 480

>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1262

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 453 NSSAGLIPPGGASSDQGEPAPQGGAEH 373
           + S  + PPG A+     PAP+GG EH
Sbjct: 2   SGSKSVSPPGYAAQTAASPAPRGGPEH 28

>LEG3_HUMAN (P17931) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29) (L-31)
           (Galactoside-binding protein) (GALBP)
          Length = 249

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 409 SGRASPAGWRGAFRPTGSTASGYS*GANDGALP-SP*PGAVP 287
           SG  +P GW GA+    + A GY   +  GA P    PGA P
Sbjct: 13  SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYP 54

>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 453 NSSAGLIPPGGASSDQGEPAPQGGAEHFGRRAQQPQD--TPREP 328
           +S A +IPP    + +  P      E   R++Q P +  TPREP
Sbjct: 544 SSPAPIIPPSSDGNTEAGPESSIQGERHDRKSQSPNECLTPREP 587

>APOE_RAT (P02650) Apolipoprotein E precursor (Apo-E)|
          Length = 312

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 367 AEMLRATLRGWLA-LI*GGATRWNETSTAVKLSVAPRRIASSTISLQ 504
           AE+ +A ++GW   L+     +W      ++ SVA   IAS+T+ L+
Sbjct: 264 AEIFQARIKGWFEPLVEDMQRQWANLMEKIQASVATNSIASTTVPLE 310

>HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain-binding protein-related) (RAB-R)
          Length = 481

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 462 GQFNSSAGLIPPGGASSDQGEPAPQGGAE--HFGRRAQQPQDTP 337
           G  +S  G +PP G +S Q +P P G ++   FG     P   P
Sbjct: 268 GPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQP 311

>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1264

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 453 NSSAGLIPPGGASSDQGEPAPQGGAEH 373
           + S G+ PPG A+     PA +GG EH
Sbjct: 2   SGSKGVSPPGYAAQTAAAPASRGGPEH 28


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,076,465
Number of Sequences: 219361
Number of extensions: 1531863
Number of successful extensions: 5265
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5237
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)