ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predic... 109 9e-21
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
3dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
4dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 109 9e-21
5dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 9e-21
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9ref|NM_120130.1| Arabidopsis thaliana unknown protein AT4G39690 ... 42 1.7
10emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chro... 42 1.7
11gb|BT000714.1| Arabidopsis thaliana clone RAFL09-88-P19 (R19802)... 42 1.7
12emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, ... 42 1.7
13emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, B... 42 1.7
14emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, B... 42 1.7
15gb|AY124859.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, co... 42 1.7
16gb|AF361810.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, co... 42 1.7
17gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
18ref|NM_003039.1| Homo sapiens solute carrier family 2 (facilitat... 40 6.9
19gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosom... 40 6.9
20gb|BC073131.1| Homo sapiens zinc finger, A20 domain containing 2... 40 6.9
21gb|BC001820.2| Homo sapiens solute carrier family 2 (facilitated... 40 6.9
22gb|BC001692.2| Homo sapiens solute carrier family 2 (facilitated... 40 6.9
23gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, co... 40 6.9
24ref|XM_001000581.1| PREDICTED: Mus musculus zinc finger, A20 dom... 40 6.9
25ref|XM_001000565.1| PREDICTED: Mus musculus zinc finger, A20 dom... 40 6.9
26ref|XM_001000597.1| PREDICTED: Mus musculus zinc finger, A20 dom... 40 6.9
27gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 40 6.9
28gb|AC145552.3| Mus musculus BAC clone RP24-573I22 from chromosom... 40 6.9
29gb|AC144624.3| Mus musculus BAC clone RP24-190P7 from chromosome... 40 6.9
30emb|Z83111.1|CEF57G8 Caenorhabditis elegans Cosmid F57G8, comple... 40 6.9
31gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome... 40 6.9
32ref|XM_533526.2| PREDICTED: Canis familiaris similar to Zinc fin... 40 6.9
33ref|XM_853718.1| PREDICTED: Canis familiaris similar to Zinc fin... 40 6.9
34ref|XM_853680.1| PREDICTED: Canis familiaris similar to Zinc fin... 40 6.9
35ref|XM_844335.1| PREDICTED: Canis familiaris similar to Zinc fin... 40 6.9
36gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 40 6.9
37emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chr... 40 6.9
38emb|AL136160.18| Human DNA sequence from clone RP11-16L6 on chro... 40 6.9
39emb|AL135924.11| Human DNA sequence from clone RP11-63P12 on chr... 40 6.9
40emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 o... 40 6.9
41ref|NM_009551.2| Mus musculus zinc finger, A20 domain containing... 40 6.9
42gb|U11843.1|HUGLUT6 Homo sapiens fructose transporter (GLU) gene... 40 6.9
43gb|DQ397836.1| Cenarchaeum symbiosum clone C02H06, complete sequ... 40 6.9
44gb|DQ397834.1| Cenarchaeum symbiosum clone C02E12, complete sequ... 40 6.9
45emb|CR624137.1| full-length cDNA clone CS0DF016YE09 of Fetal bra... 40 6.9
46emb|CR612072.1| full-length cDNA clone CS0DL004YJ19 of B cells (... 40 6.9
47dbj|AK131911.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 6.9
48gb|AC160824.2| Xenopus tropicalis Irx5 gene, complete cds, compl... 40 6.9
49ref|NM_074727.2| Caenorhabditis elegans Serpentine Receptor, cla... 40 6.9
50dbj|AK076397.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 6.9
51ref|XM_215251.3| PREDICTED: Rattus norvegicus zinc finger protei... 40 6.9
52gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ... 40 6.9
53emb|BX649046.1|HSM809197 Homo sapiens mRNA; cDNA DKFZp779D0520 (... 40 6.9
54emb|BX648551.1|HSM808699 Homo sapiens mRNA; cDNA DKFZp779J1631 (... 40 6.9
55dbj|AK025782.1| Homo sapiens cDNA: FLJ22129 fis, clone HEP19575,... 40 6.9
56gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, compl... 40 6.9
57emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 i... 40 6.9
58gb|AF062072.1|AF062072 Homo sapiens zinc finger protein 216 (ZNF... 40 6.9
59emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-9... 40 6.9
60gb|AF062347.1|AF062347 Homo sapiens zinc finger protein 216 spli... 40 6.9
61gb|AF062346.1|AF062346 Homo sapiens zinc finger protein 216 spli... 40 6.9
62gb|AF062071.1|AF062071 Mus musculus zinc finger protein ZNF216 m... 40 6.9
63emb|AL928987.13| Mouse DNA sequence from clone RP23-55M21 on chr... 40 6.9
64gb|BC080270.1| Mus musculus cDNA clone IMAGE:6816490, containing... 40 6.9
65gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome... 40 6.9
66ref|NM_006007.1| Homo sapiens zinc finger, A20 domain containing... 40 6.9
67emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chro... 40 6.9
68emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on ch... 40 6.9
69gb|M55531.1|HUMGLUT5 Human glucose transport-like 5 (GLUT5) mRNA... 40 6.9
70emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chr... 40 6.9

>ref|XM_476319.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1167

 Score =  109 bits (55), Expect = 9e-21
 Identities = 142/171 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396
            |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 1154 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 1095

                                                                        
Query: 397  tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456
             ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| 
Sbjct: 1094 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 1035

                                                               
Query: 457  ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507
            ||||| |||||||| ||   ||| |||||||| ||||||||||||||||||
Sbjct: 1034 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 984



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  109 bits (55), Expect = 9e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                           
Query: 337     aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396
               |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 3959135 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 3959194

                                                                           
Query: 397     tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456
                ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| 
Sbjct: 3959195 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 3959254

                                                                  
Query: 457     ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507
               ||||| |||||||| ||   ||| |||||||| ||||||||||||||||||
Sbjct: 3959255 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 3959305



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                
Query: 167     catgttcgttggcttaattaccaacaagaataa 199
               |||||||||||||||||||||||||||||||||
Sbjct: 3958959 catgttcgttggcttaattaccaacaagaataa 3958991



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>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0019L07
          Length = 131650

 Score =  109 bits (55), Expect = 9e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                        
Query: 337  aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396
            |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 2790 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 2849

                                                                        
Query: 397  tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456
             ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| 
Sbjct: 2850 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 2909

                                                               
Query: 457  ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507
            ||||| |||||||| ||   ||| |||||||| ||||||||||||||||||
Sbjct: 2910 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 2960



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 167  catgttcgttggcttaattaccaacaagaataa 199
            |||||||||||||||||||||||||||||||||
Sbjct: 2614 catgttcgttggcttaattaccaacaagaataa 2646



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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score =  109 bits (55), Expect = 9e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                         
Query: 337   aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396
             |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 65011 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 65070

                                                                         
Query: 397   tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456
              ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| 
Sbjct: 65071 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 65130

                                                                
Query: 457   ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507
             ||||| |||||||| ||   ||| |||||||| ||||||||||||||||||
Sbjct: 65131 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 65181



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                              
Query: 167   catgttcgttggcttaattaccaacaagaataa 199
             |||||||||||||||||||||||||||||||||
Sbjct: 64835 catgttcgttggcttaattaccaacaagaataa 64867



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>dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O16, full
            insert sequence
          Length = 1713

 Score =  109 bits (55), Expect = 9e-21
 Identities = 142/171 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396
            |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| 
Sbjct: 1320 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 1261

                                                                        
Query: 397  tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456
             ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| 
Sbjct: 1260 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 1201

                                                               
Query: 457  ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507
            ||||| |||||||| ||   ||| |||||||| ||||||||||||||||||
Sbjct: 1200 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 1150



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 167  catgttcgttggcttaattaccaacaagaataa 199
            |||||||||||||||||||||||||||||||||
Sbjct: 1496 catgttcgttggcttaattaccaacaagaataa 1464



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                            
Query: 406      ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465
                |||| ||||||||| ||| || ||||||||||||||| ||| || ||||  ||||| | |
Sbjct: 34048331 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 34048272

                                                         
Query: 466      gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506
                || || || | ||| |||||||||||||||| | |||||||
Sbjct: 34048271 gcccctcgccttattgcctcctcgacgatctgcttgcagca 34048231



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>dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_D07
          Length = 110585

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 406   ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465
             |||| ||||||||| ||| || ||||||||||||||| ||| || ||||  ||||| | |
Sbjct: 75606 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 75547

                                                      
Query: 466   gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506
             || || || | ||| |||||||||||||||| | |||||||
Sbjct: 75546 gcccctcgccttattgcctcctcgacgatctgcttgcagca 75506



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>dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F12, full
            insert sequence
          Length = 1660

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 406  ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465
            |||| ||||||||| ||| || ||||||||||||||| ||| || ||||  ||||| | |
Sbjct: 1216 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 1157

                                                     
Query: 466  gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506
            || || || | ||| |||||||||||||||| | |||||||
Sbjct: 1156 gcccctcgccttattgcctcctcgacgatctgcttgcagca 1116



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>ref|NM_120130.1| Arabidopsis thaliana unknown protein AT4G39690 mRNA, complete cds
          Length = 2376

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  cgccaccaggtggaatgagac 440
            |||||||||||||||||||||
Sbjct: 1757 cgccaccaggtggaatgagac 1737



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>emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chromosome Xq21.1-21.31
             Contains the 5' end of the RPS6KA6 gene for ribosomal
             protein S6 kinase (90kD) polypeptide 6 and a CpG island,
             complete sequence
          Length = 143220

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    atgaaaacagggaaatgtata 84
             |||||||||||||||||||||
Sbjct: 77230 atgaaaacagggaaatgtata 77250



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>gb|BT000714.1| Arabidopsis thaliana clone RAFL09-88-P19 (R19802) unknown protein
            (At4g39690) mRNA, complete cds
          Length = 2296

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  cgccaccaggtggaatgagac 440
            |||||||||||||||||||||
Sbjct: 1736 cgccaccaggtggaatgagac 1716



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>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    cgccaccaggtggaatgagac 440
              |||||||||||||||||||||
Sbjct: 141431 cgccaccaggtggaatgagac 141411



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>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project)
          Length = 129047

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    cgccaccaggtggaatgagac 440
              |||||||||||||||||||||
Sbjct: 116217 cgccaccaggtggaatgagac 116197



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>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project)
          Length = 88343

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 420   cgccaccaggtggaatgagac 440
             |||||||||||||||||||||
Sbjct: 24401 cgccaccaggtggaatgagac 24381



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>gb|AY124859.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, complete cds
          Length = 1953

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  cgccaccaggtggaatgagac 440
            |||||||||||||||||||||
Sbjct: 1672 cgccaccaggtggaatgagac 1652



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>gb|AF361810.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, complete cds
          Length = 2377

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  cgccaccaggtggaatgagac 440
            |||||||||||||||||||||
Sbjct: 1757 cgccaccaggtggaatgagac 1737



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 375    gctccgcgccaccctgcggggctgg 399
              |||| ||||||||||||||||||||
Sbjct: 882390 gctcagcgccaccctgcggggctgg 882414



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>ref|NM_003039.1| Homo sapiens solute carrier family 2 (facilitated glucose/fructose
            transporter), member 5 (SLC2A5), mRNA
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ggtaacataacaacaacagt 243
            ||||||||||||||||||||
Sbjct: 1905 ggtaacataacaacaacagt 1924



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>gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosome 12, complete
             sequence
          Length = 160191

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcacacagcctctcctccag 118
             ||||||||||||||||||||
Sbjct: 35039 gcacacagcctctcctccag 35058



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>gb|BC073131.1| Homo sapiens zinc finger, A20 domain containing 2, mRNA (cDNA clone
            MGC:87987 IMAGE:6137219), complete cds
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1967 tatttacagatgaaaacagg 1948



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>gb|BC001820.2| Homo sapiens solute carrier family 2 (facilitated glucose/fructose
            transporter), member 5, mRNA (cDNA clone MGC:3654
            IMAGE:2966459), complete cds
          Length = 2213

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ggtaacataacaacaacagt 243
            ||||||||||||||||||||
Sbjct: 1881 ggtaacataacaacaacagt 1900



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>gb|BC001692.2| Homo sapiens solute carrier family 2 (facilitated glucose/fructose
            transporter), member 5, mRNA (cDNA clone MGC:1619
            IMAGE:2966459), complete cds
          Length = 2213

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ggtaacataacaacaacagt 243
            ||||||||||||||||||||
Sbjct: 1881 ggtaacataacaacaacagt 1900



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>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    agccactgcctcaacaacaatggg 224
              ||||||||||||||| ||||||||
Sbjct: 194433 agccactgcctcaaccacaatggg 194456



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>ref|XM_001000581.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2,
            transcript variant 4 (Za20d2), mRNA
          Length = 5021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2430 tatttacagatgaaaacagg 2411



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>ref|XM_001000565.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2,
            transcript variant 2 (Za20d2), mRNA
          Length = 4569

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1978 tatttacagatgaaaacagg 1959



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>ref|XM_001000597.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2,
            transcript variant 3 (Za20d2), mRNA
          Length = 4692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2101 tatttacagatgaaaacagg 2082



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>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tatttacagatgaaaacagg 74
              ||||||||||||||||||||
Sbjct: 111215 tatttacagatgaaaacagg 111196



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>gb|AC145552.3| Mus musculus BAC clone RP24-573I22 from chromosome Y, complete sequence
          Length = 146775

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   aatggggtaacataacaaca 238
             ||||||||||||||||||||
Sbjct: 49528 aatggggtaacataacaaca 49547



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>gb|AC144624.3| Mus musculus BAC clone RP24-190P7 from chromosome Y, complete sequence
          Length = 166431

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   aatggggtaacataacaaca 238
             ||||||||||||||||||||
Sbjct: 54794 aatggggtaacataacaaca 54775



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>emb|Z83111.1|CEF57G8 Caenorhabditis elegans Cosmid F57G8, complete sequence
          Length = 26581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tgaaaacagggaaatgtata 84
             ||||||||||||||||||||
Sbjct: 17311 tgaaaacagggaaatgtata 17330



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>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ataacaacaacagtgaagca 249
              ||||||||||||||||||||
Sbjct: 122349 ataacaacaacagtgaagca 122330



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>ref|XM_533526.2| PREDICTED: Canis familiaris similar to Zinc finger A20 domain
            containing protein 2 (Zinc finger protein 216),
            transcript variant 1 (LOC476324), mRNA
          Length = 2181

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1943 tatttacagatgaaaacagg 1924



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>ref|XM_853718.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain
            containing protein 2 (Zinc finger protein 216),
            transcript variant 4 (LOC476324), mRNA
          Length = 2056

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1818 tatttacagatgaaaacagg 1799



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>ref|XM_853680.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain
            containing protein 2 (Zinc finger protein 216),
            transcript variant 3 (LOC476324), mRNA
          Length = 2152

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1914 tatttacagatgaaaacagg 1895



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>ref|XM_844335.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain
            containing protein 2 (Zinc finger protein 216),
            transcript variant 2 (LOC476324), mRNA
          Length = 2248

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2010 tatttacagatgaaaacagg 1991



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>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     tatttacagatgaaaacagg 74
              ||||||||||||||||||||
Sbjct: 219601 tatttacagatgaaaacagg 219620



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>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33
             Contains the SLC2A5 gene for solute carrier family 2
             (facilitated glucose/fructose transporter) member 5, two
             novel genes and two CpG islands, complete sequence
          Length = 139111

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ggtaacataacaacaacagt 243
             ||||||||||||||||||||
Sbjct: 95859 ggtaacataacaacaacagt 95878



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>emb|AL136160.18| Human DNA sequence from clone RP11-16L6 on chromosome 13q12.3-13.3
             Contains part of a novel gene,  a
             glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
             pseudogene and a novel pseudogene, complete sequence
          Length = 155430

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    agacatataaaatttcagtt 31
             ||||||||||||||||||||
Sbjct: 37658 agacatataaaatttcagtt 37677



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>emb|AL135924.11| Human DNA sequence from clone RP11-63P12 on chromosome 9q21.11-21.33
             Contains the ZNF216 gene for zinc finger protein 216, a
             novel gene (FLJ37891), an (NM23B) expressed in
             non-metastatic cells 2 (NME2) pseudogene, a novel gene,
             the 3' end of the GDA gene for guanine deaminase and a CpG
             island, complete sequence
          Length = 162985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tatttacagatgaaaacagg 74
             ||||||||||||||||||||
Sbjct: 51749 tatttacagatgaaaacagg 51730



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>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
              5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
              (TiT3 complex), an aldo-keto reductase family 1 member D1
              (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
              pseudogene, the CREG gene for cellular repressor of
              E1A-stimulated genes, a ribosomal protein S18 (RPS18)
              pseudogene, a novel gene, the 5' end of the gene for a
              novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     gggaaatgtataatggtacaacaa 96
              |||||||||| |||||||||||||
Sbjct: 175466 gggaaatgtaaaatggtacaacaa 175443



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>ref|NM_009551.2| Mus musculus zinc finger, A20 domain containing 2 (Za20d2), mRNA
          Length = 2835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2347 tatttacagatgaaaacagg 2328



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>gb|U11843.1|HUGLUT6 Homo sapiens fructose transporter (GLU) gene, exons 5 through 10 and
            complete cds
          Length = 3165

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ggtaacataacaacaacagt 243
            ||||||||||||||||||||
Sbjct: 2993 ggtaacataacaacaacagt 3012



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>gb|DQ397836.1| Cenarchaeum symbiosum clone C02H06, complete sequence
          Length = 39848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    taggccccgacaatcttatt 58
             ||||||||||||||||||||
Sbjct: 33505 taggccccgacaatcttatt 33524



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>gb|DQ397834.1| Cenarchaeum symbiosum clone C02E12, complete sequence
          Length = 39848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   taggccccgacaatcttatt 58
            ||||||||||||||||||||
Sbjct: 6344 taggccccgacaatcttatt 6325



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>emb|CR624137.1| full-length cDNA clone CS0DF016YE09 of Fetal brain of Homo sapiens
            (human)
          Length = 1798

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1588 tatttacagatgaaaacagg 1569



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>emb|CR612072.1| full-length cDNA clone CS0DL004YJ19 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1528

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1283 tatttacagatgaaaacagg 1264



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>dbj|AK131911.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310021N08 product:zinc finger protein
            216, full insert sequence
          Length = 2559

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2342 tatttacagatgaaaacagg 2323



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>gb|AC160824.2| Xenopus tropicalis Irx5 gene, complete cds, complete sequence
          Length = 73293

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   acagatgaaaacagggaaat 79
            ||||||||||||||||||||
Sbjct: 4022 acagatgaaaacagggaaat 4041



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>ref|NM_074727.2| Caenorhabditis elegans Serpentine Receptor, class H family member
           (srh-167) (srh-167) mRNA, complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  tgaaaacagggaaatgtata 84
           ||||||||||||||||||||
Sbjct: 573 tgaaaacagggaaatgtata 592



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>dbj|AK076397.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732491G13 product:zinc finger protein
            216, full insert sequence
          Length = 2835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2347 tatttacagatgaaaacagg 2328



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>ref|XM_215251.3| PREDICTED: Rattus norvegicus zinc finger protein 216 (predicted)
            (Zfp216_predicted), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2723 tatttacagatgaaaacagg 2704



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>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   agcaccggcacggcacccgg 301
             ||||||||||||||||||||
Sbjct: 12705 agcaccggcacggcacccgg 12686



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>emb|BX649046.1|HSM809197 Homo sapiens mRNA; cDNA DKFZp779D0520 (from clone DKFZp779D0520)
          Length = 2236

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1991 tatttacagatgaaaacagg 1972



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>emb|BX648551.1|HSM808699 Homo sapiens mRNA; cDNA DKFZp779J1631 (from clone DKFZp779J1631)
          Length = 5763

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 5394 tatttacagatgaaaacagg 5375



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>dbj|AK025782.1| Homo sapiens cDNA: FLJ22129 fis, clone HEP19575, highly similar to
            AF062347 Homo sapiens zinc finger protein 216 splice
            variant 2 (ZNF216) mRNA
          Length = 2347

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2066 tatttacagatgaaaacagg 2047



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>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence
          Length = 175641

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gcacacagcctctcctccag 118
            ||||||||||||||||||||
Sbjct: 9721 gcacacagcctctcctccag 9702



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>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20,
             complete sequence
          Length = 170767

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gtacaacaaaggcacacagc 107
             ||||||||||||||||||||
Sbjct: 14052 gtacaacaaaggcacacagc 14071



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>gb|AF062072.1|AF062072 Homo sapiens zinc finger protein 216 (ZNF216) gene, complete cds
          Length = 11019

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tatttacagatgaaaacagg 74
             ||||||||||||||||||||
Sbjct: 10787 tatttacagatgaaaacagg 10768



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>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 213239

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     tatttacagatgaaaacagggaaa 78
              ||||||||||||||| ||||||||
Sbjct: 114538 tatttacagatgaaatcagggaaa 114561



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>gb|AF062347.1|AF062347 Homo sapiens zinc finger protein 216 splice variant 2 (ZNF216) mRNA,
            complete cds
          Length = 2273

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2041 tatttacagatgaaaacagg 2022



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>gb|AF062346.1|AF062346 Homo sapiens zinc finger protein 216 splice variant 1 (ZNF216) mRNA,
            complete cds
          Length = 2418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2186 tatttacagatgaaaacagg 2167



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>gb|AF062071.1|AF062071 Mus musculus zinc finger protein ZNF216 mRNA, complete cds
          Length = 2167

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 1938 tatttacagatgaaaacagg 1919



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>emb|AL928987.13| Mouse DNA sequence from clone RP23-55M21 on chromosome 2, complete
              sequence
          Length = 150363

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    ataacaacaacagtgaagca 249
              ||||||||||||||||||||
Sbjct: 117347 ataacaacaacagtgaagca 117366



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>gb|BC080270.1| Mus musculus cDNA clone IMAGE:6816490, containing frame-shift errors
          Length = 2572

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2327 tatttacagatgaaaacagg 2308



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>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence
          Length = 198038

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    tatttacagatgaaaacagg 74
             ||||||||||||||||||||
Sbjct: 56116 tatttacagatgaaaacagg 56135



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>ref|NM_006007.1| Homo sapiens zinc finger, A20 domain containing 2 (ZA20D2), mRNA
          Length = 2425

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tatttacagatgaaaacagg 74
            ||||||||||||||||||||
Sbjct: 2193 tatttacagatgaaaacagg 2174



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>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete
              sequence
          Length = 178227

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    ctggctcgccctgatctgag 415
              ||||||||||||||||||||
Sbjct: 103421 ctggctcgccctgatctgag 103440



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>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
             sequence
          Length = 165908

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    taaaatttcagttgcactga 38
             ||||||||||||||||||||
Sbjct: 80234 taaaatttcagttgcactga 80253



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>gb|M55531.1|HUMGLUT5 Human glucose transport-like 5 (GLUT5) mRNA, complete cds
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ggtaacataacaacaacagt 243
            ||||||||||||||||||||
Sbjct: 1905 ggtaacataacaacaacagt 1924



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>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete
             sequence
          Length = 78456

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tatttacagatgaaaacagg 74
             ||||||||||||||||||||
Sbjct: 28402 tatttacagatgaaaacagg 28383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,465,370
Number of Sequences: 3902068
Number of extensions: 4465370
Number of successful extensions: 138563
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138342
Number of HSP's gapped (non-prelim): 221
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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