Clone Name | rbart13h08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 109 bits (55), Expect = 9e-21 Identities = 142/171 (83%) Strand = Plus / Minus Query: 337 aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396 |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct: 1154 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 1095 Query: 397 tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456 ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| Sbjct: 1094 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 1035 Query: 457 ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507 ||||| |||||||| || ||| |||||||| |||||||||||||||||| Sbjct: 1034 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 984
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 9e-21 Identities = 142/171 (83%) Strand = Plus / Plus Query: 337 aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396 |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct: 3959135 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 3959194 Query: 397 tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456 ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| Sbjct: 3959195 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 3959254 Query: 457 ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507 ||||| |||||||| || ||| |||||||| |||||||||||||||||| Sbjct: 3959255 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 3959305 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 167 catgttcgttggcttaattaccaacaagaataa 199 ||||||||||||||||||||||||||||||||| Sbjct: 3958959 catgttcgttggcttaattaccaacaagaataa 3958991
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 109 bits (55), Expect = 9e-21 Identities = 142/171 (83%) Strand = Plus / Plus Query: 337 aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396 |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct: 2790 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 2849 Query: 397 tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456 ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| Sbjct: 2850 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 2909 Query: 457 ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507 ||||| |||||||| || ||| |||||||| |||||||||||||||||| Sbjct: 2910 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 2960 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 167 catgttcgttggcttaattaccaacaagaataa 199 ||||||||||||||||||||||||||||||||| Sbjct: 2614 catgttcgttggcttaattaccaacaagaataa 2646
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 109 bits (55), Expect = 9e-21 Identities = 142/171 (83%) Strand = Plus / Plus Query: 337 aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396 |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct: 65011 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 65070 Query: 397 tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456 ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| Sbjct: 65071 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 65130 Query: 457 ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507 ||||| |||||||| || ||| |||||||| |||||||||||||||||| Sbjct: 65131 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 65181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 167 catgttcgttggcttaattaccaacaagaataa 199 ||||||||||||||||||||||||||||||||| Sbjct: 64835 catgttcgttggcttaattaccaacaagaataa 64867
>dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O16, full insert sequence Length = 1713 Score = 109 bits (55), Expect = 9e-21 Identities = 142/171 (83%) Strand = Plus / Minus Query: 337 aggagtatcctgaggctgttgagcccgtcggccgaaatgctccgcgccaccctgcggggc 396 |||||| |||| | |||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct: 1320 aggagtgtcctcaagctgttcagcccctcagccgaaatgctgcgcgccaccctaccgggt 1261 Query: 397 tggctcgccctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaa 456 ||||| | |||| ||| ||||| ||| |||||||||| ||||||| ||| || ||||| Sbjct: 1260 cggctcactctgacctggggaggagcctccaggtggaaggagaccaacaccgcggttaag 1201 Query: 457 ttgtccgtggcgccccgtcgtatcgcctcctcgacgatctccctgcagcag 507 ||||| |||||||| || ||| |||||||| |||||||||||||||||| Sbjct: 1200 ttgtcggtggcgcctcgctttattgcctcctcaacgatctccctgcagcag 1150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 167 catgttcgttggcttaattaccaacaagaataa 199 ||||||||||||||||||||||||||||||||| Sbjct: 1496 catgttcgttggcttaattaccaacaagaataa 1464
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 406 ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465 |||| ||||||||| ||| || ||||||||||||||| ||| || |||| ||||| | | Sbjct: 34048331 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 34048272 Query: 466 gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506 || || || | ||| |||||||||||||||| | ||||||| Sbjct: 34048271 gcccctcgccttattgcctcctcgacgatctgcttgcagca 34048231
>dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_D07 Length = 110585 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 406 ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465 |||| ||||||||| ||| || ||||||||||||||| ||| || |||| ||||| | | Sbjct: 75606 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 75547 Query: 466 gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506 || || || | ||| |||||||||||||||| | ||||||| Sbjct: 75546 gcccctcgccttattgcctcctcgacgatctgcttgcagca 75506
>dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F12, full insert sequence Length = 1660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 406 ctgatctgaggaggcgccaccaggtggaatgagaccagcactgctgttaaattgtccgtg 465 |||| ||||||||| ||| || ||||||||||||||| ||| || |||| ||||| | | Sbjct: 1216 ctgagctgaggaggggcctcctggtggaatgagaccatcaccgccgttaggttgtctgag 1157 Query: 466 gcgccccgtcgtatcgcctcctcgacgatctccctgcagca 506 || || || | ||| |||||||||||||||| | ||||||| Sbjct: 1156 gcccctcgccttattgcctcctcgacgatctgcttgcagca 1116
>ref|NM_120130.1| Arabidopsis thaliana unknown protein AT4G39690 mRNA, complete cds Length = 2376 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 1757 cgccaccaggtggaatgagac 1737
>emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chromosome Xq21.1-21.31 Contains the 5' end of the RPS6KA6 gene for ribosomal protein S6 kinase (90kD) polypeptide 6 and a CpG island, complete sequence Length = 143220 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atgaaaacagggaaatgtata 84 ||||||||||||||||||||| Sbjct: 77230 atgaaaacagggaaatgtata 77250
>gb|BT000714.1| Arabidopsis thaliana clone RAFL09-88-P19 (R19802) unknown protein (At4g39690) mRNA, complete cds Length = 2296 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 1736 cgccaccaggtggaatgagac 1716
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 141431 cgccaccaggtggaatgagac 141411
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 116217 cgccaccaggtggaatgagac 116197
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project) Length = 88343 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 24401 cgccaccaggtggaatgagac 24381
>gb|AY124859.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, complete cds Length = 1953 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 1672 cgccaccaggtggaatgagac 1652
>gb|AF361810.1| Arabidopsis thaliana AT4g39690/T19P19_80 mRNA, complete cds Length = 2377 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgccaccaggtggaatgagac 440 ||||||||||||||||||||| Sbjct: 1757 cgccaccaggtggaatgagac 1737
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 gctccgcgccaccctgcggggctgg 399 |||| |||||||||||||||||||| Sbjct: 882390 gctcagcgccaccctgcggggctgg 882414
>ref|NM_003039.1| Homo sapiens solute carrier family 2 (facilitated glucose/fructose transporter), member 5 (SLC2A5), mRNA Length = 2218 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 1905 ggtaacataacaacaacagt 1924
>gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosome 12, complete sequence Length = 160191 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gcacacagcctctcctccag 118 |||||||||||||||||||| Sbjct: 35039 gcacacagcctctcctccag 35058
>gb|BC073131.1| Homo sapiens zinc finger, A20 domain containing 2, mRNA (cDNA clone MGC:87987 IMAGE:6137219), complete cds Length = 2218 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1967 tatttacagatgaaaacagg 1948
>gb|BC001820.2| Homo sapiens solute carrier family 2 (facilitated glucose/fructose transporter), member 5, mRNA (cDNA clone MGC:3654 IMAGE:2966459), complete cds Length = 2213 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 1881 ggtaacataacaacaacagt 1900
>gb|BC001692.2| Homo sapiens solute carrier family 2 (facilitated glucose/fructose transporter), member 5, mRNA (cDNA clone MGC:1619 IMAGE:2966459), complete cds Length = 2213 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 1881 ggtaacataacaacaacagt 1900
>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 agccactgcctcaacaacaatggg 224 ||||||||||||||| |||||||| Sbjct: 194433 agccactgcctcaaccacaatggg 194456
>ref|XM_001000581.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2, transcript variant 4 (Za20d2), mRNA Length = 5021 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2430 tatttacagatgaaaacagg 2411
>ref|XM_001000565.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2, transcript variant 2 (Za20d2), mRNA Length = 4569 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1978 tatttacagatgaaaacagg 1959
>ref|XM_001000597.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2, transcript variant 3 (Za20d2), mRNA Length = 4692 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2101 tatttacagatgaaaacagg 2082
>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence Length = 245390 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 111215 tatttacagatgaaaacagg 111196
>gb|AC145552.3| Mus musculus BAC clone RP24-573I22 from chromosome Y, complete sequence Length = 146775 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 aatggggtaacataacaaca 238 |||||||||||||||||||| Sbjct: 49528 aatggggtaacataacaaca 49547
>gb|AC144624.3| Mus musculus BAC clone RP24-190P7 from chromosome Y, complete sequence Length = 166431 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 aatggggtaacataacaaca 238 |||||||||||||||||||| Sbjct: 54794 aatggggtaacataacaaca 54775
>emb|Z83111.1|CEF57G8 Caenorhabditis elegans Cosmid F57G8, complete sequence Length = 26581 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaaaacagggaaatgtata 84 |||||||||||||||||||| Sbjct: 17311 tgaaaacagggaaatgtata 17330
>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence Length = 165496 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ataacaacaacagtgaagca 249 |||||||||||||||||||| Sbjct: 122349 ataacaacaacagtgaagca 122330
>ref|XM_533526.2| PREDICTED: Canis familiaris similar to Zinc finger A20 domain containing protein 2 (Zinc finger protein 216), transcript variant 1 (LOC476324), mRNA Length = 2181 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1943 tatttacagatgaaaacagg 1924
>ref|XM_853718.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain containing protein 2 (Zinc finger protein 216), transcript variant 4 (LOC476324), mRNA Length = 2056 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1818 tatttacagatgaaaacagg 1799
>ref|XM_853680.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain containing protein 2 (Zinc finger protein 216), transcript variant 3 (LOC476324), mRNA Length = 2152 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1914 tatttacagatgaaaacagg 1895
>ref|XM_844335.1| PREDICTED: Canis familiaris similar to Zinc finger A20 domain containing protein 2 (Zinc finger protein 216), transcript variant 2 (LOC476324), mRNA Length = 2248 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2010 tatttacagatgaaaacagg 1991
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence Length = 225423 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 219601 tatttacagatgaaaacagg 219620
>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33 Contains the SLC2A5 gene for solute carrier family 2 (facilitated glucose/fructose transporter) member 5, two novel genes and two CpG islands, complete sequence Length = 139111 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 95859 ggtaacataacaacaacagt 95878
>emb|AL136160.18| Human DNA sequence from clone RP11-16L6 on chromosome 13q12.3-13.3 Contains part of a novel gene, a glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudogene and a novel pseudogene, complete sequence Length = 155430 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agacatataaaatttcagtt 31 |||||||||||||||||||| Sbjct: 37658 agacatataaaatttcagtt 37677
>emb|AL135924.11| Human DNA sequence from clone RP11-63P12 on chromosome 9q21.11-21.33 Contains the ZNF216 gene for zinc finger protein 216, a novel gene (FLJ37891), an (NM23B) expressed in non-metastatic cells 2 (NME2) pseudogene, a novel gene, the 3' end of the GDA gene for guanine deaminase and a CpG island, complete sequence Length = 162985 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 51749 tatttacagatgaaaacagg 51730
>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the 5' end of the CD3Z gene for CD3Z antigen zeta polypeptide (TiT3 complex), an aldo-keto reductase family 1 member D1 (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1) pseudogene, the CREG gene for cellular repressor of E1A-stimulated genes, a ribosomal protein S18 (RPS18) pseudogene, a novel gene, the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 215861 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gggaaatgtataatggtacaacaa 96 |||||||||| ||||||||||||| Sbjct: 175466 gggaaatgtaaaatggtacaacaa 175443
>ref|NM_009551.2| Mus musculus zinc finger, A20 domain containing 2 (Za20d2), mRNA Length = 2835 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2347 tatttacagatgaaaacagg 2328
>gb|U11843.1|HUGLUT6 Homo sapiens fructose transporter (GLU) gene, exons 5 through 10 and complete cds Length = 3165 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 2993 ggtaacataacaacaacagt 3012
>gb|DQ397836.1| Cenarchaeum symbiosum clone C02H06, complete sequence Length = 39848 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 taggccccgacaatcttatt 58 |||||||||||||||||||| Sbjct: 33505 taggccccgacaatcttatt 33524
>gb|DQ397834.1| Cenarchaeum symbiosum clone C02E12, complete sequence Length = 39848 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 taggccccgacaatcttatt 58 |||||||||||||||||||| Sbjct: 6344 taggccccgacaatcttatt 6325
>emb|CR624137.1| full-length cDNA clone CS0DF016YE09 of Fetal brain of Homo sapiens (human) Length = 1798 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1588 tatttacagatgaaaacagg 1569
>emb|CR612072.1| full-length cDNA clone CS0DL004YJ19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1528 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1283 tatttacagatgaaaacagg 1264
>dbj|AK131911.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310021N08 product:zinc finger protein 216, full insert sequence Length = 2559 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2342 tatttacagatgaaaacagg 2323
>gb|AC160824.2| Xenopus tropicalis Irx5 gene, complete cds, complete sequence Length = 73293 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 acagatgaaaacagggaaat 79 |||||||||||||||||||| Sbjct: 4022 acagatgaaaacagggaaat 4041
>ref|NM_074727.2| Caenorhabditis elegans Serpentine Receptor, class H family member (srh-167) (srh-167) mRNA, complete cds Length = 996 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tgaaaacagggaaatgtata 84 |||||||||||||||||||| Sbjct: 573 tgaaaacagggaaatgtata 592
>dbj|AK076397.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732491G13 product:zinc finger protein 216, full insert sequence Length = 2835 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2347 tatttacagatgaaaacagg 2328
>ref|XM_215251.3| PREDICTED: Rattus norvegicus zinc finger protein 216 (predicted) (Zfp216_predicted), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2723 tatttacagatgaaaacagg 2704
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 agcaccggcacggcacccgg 301 |||||||||||||||||||| Sbjct: 12705 agcaccggcacggcacccgg 12686
>emb|BX649046.1|HSM809197 Homo sapiens mRNA; cDNA DKFZp779D0520 (from clone DKFZp779D0520) Length = 2236 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1991 tatttacagatgaaaacagg 1972
>emb|BX648551.1|HSM808699 Homo sapiens mRNA; cDNA DKFZp779J1631 (from clone DKFZp779J1631) Length = 5763 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 5394 tatttacagatgaaaacagg 5375
>dbj|AK025782.1| Homo sapiens cDNA: FLJ22129 fis, clone HEP19575, highly similar to AF062347 Homo sapiens zinc finger protein 216 splice variant 2 (ZNF216) mRNA Length = 2347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2066 tatttacagatgaaaacagg 2047
>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence Length = 175641 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacacagcctctcctccag 118 |||||||||||||||||||| Sbjct: 9721 gcacacagcctctcctccag 9702
>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20, complete sequence Length = 170767 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtacaacaaaggcacacagc 107 |||||||||||||||||||| Sbjct: 14052 gtacaacaaaggcacacagc 14071
>gb|AF062072.1|AF062072 Homo sapiens zinc finger protein 216 (ZNF216) gene, complete cds Length = 11019 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 10787 tatttacagatgaaaacagg 10768
>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213239 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tatttacagatgaaaacagggaaa 78 ||||||||||||||| |||||||| Sbjct: 114538 tatttacagatgaaatcagggaaa 114561
>gb|AF062347.1|AF062347 Homo sapiens zinc finger protein 216 splice variant 2 (ZNF216) mRNA, complete cds Length = 2273 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2041 tatttacagatgaaaacagg 2022
>gb|AF062346.1|AF062346 Homo sapiens zinc finger protein 216 splice variant 1 (ZNF216) mRNA, complete cds Length = 2418 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2186 tatttacagatgaaaacagg 2167
>gb|AF062071.1|AF062071 Mus musculus zinc finger protein ZNF216 mRNA, complete cds Length = 2167 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 1938 tatttacagatgaaaacagg 1919
>emb|AL928987.13| Mouse DNA sequence from clone RP23-55M21 on chromosome 2, complete sequence Length = 150363 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ataacaacaacagtgaagca 249 |||||||||||||||||||| Sbjct: 117347 ataacaacaacagtgaagca 117366
>gb|BC080270.1| Mus musculus cDNA clone IMAGE:6816490, containing frame-shift errors Length = 2572 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2327 tatttacagatgaaaacagg 2308
>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence Length = 198038 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 56116 tatttacagatgaaaacagg 56135
>ref|NM_006007.1| Homo sapiens zinc finger, A20 domain containing 2 (ZA20D2), mRNA Length = 2425 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 2193 tatttacagatgaaaacagg 2174
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ctggctcgccctgatctgag 415 |||||||||||||||||||| Sbjct: 103421 ctggctcgccctgatctgag 103440
>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete sequence Length = 165908 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 taaaatttcagttgcactga 38 |||||||||||||||||||| Sbjct: 80234 taaaatttcagttgcactga 80253
>gb|M55531.1|HUMGLUT5 Human glucose transport-like 5 (GLUT5) mRNA, complete cds Length = 2218 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggtaacataacaacaacagt 243 |||||||||||||||||||| Sbjct: 1905 ggtaacataacaacaacagt 1924
>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete sequence Length = 78456 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tatttacagatgaaaacagg 74 |||||||||||||||||||| Sbjct: 28402 tatttacagatgaaaacagg 28383 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,465,370 Number of Sequences: 3902068 Number of extensions: 4465370 Number of successful extensions: 138563 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138342 Number of HSP's gapped (non-prelim): 221 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)