>HHCM_HUMAN (Q05877) Hepatocellular carcinoma protein HHCM (HHC(M))|
          Length = 467

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = +1

Query: 1   EKKWGMLSLYISFHAKTRNSNLFCCVC**QRDTYHMNINTNTLSSYSNIKMQ-------N 159
           E  W    L ++ H + + +++ CC    Q   YH+N  T +L+++   + Q       N
Sbjct: 301 ELMWKPQPLQVALHLQHKPNHINCCKTKLQHSPYHLN-KTQSLTTFKTPRTQSKITSTKN 359

Query: 160 ETKLRSQGSFLCVSSVCSIT 219
           +  L  QG +  V++   +T
Sbjct: 360 QENLNEQGKWQSVAASAEMT 379

>IF2P_METJA (Q57710) Probable translation initiation factor IF-2 [Contains: Mja|
            infB intein (Mja IF2 intein)]
          Length = 1155

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 325  LVDSFFQKRNTFTCLIEIICVAFRSMRRILQEDAFELYYTQMI 197
            L D  F++++   C +E++C   R    +++ED  +L Y + I
Sbjct: 1031 LPDCIFRQKDPAICGVEVLCGTLRVGAPLMREDGMQLGYVREI 1073

>L1CAM_MOUSE (P11627) Neural cell adhesion molecule L1 precursor (N-CAM L1)|
          Length = 1260

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 308  PETKY-FYLFD*DHMRCL*EHEENITRGCIRVILHTDDTHKNEPWDLSFVSFCILILLYD 132
            P+TKY  +L      + L  H +  T G   V + T  +  +E W ++FVS  IL+LL  
Sbjct: 1084 PDTKYEIHLIK---EKVLLHHLDVKTNGTGPVRVSTTGSFASEGWFIAFVSAIILLLLI- 1139

Query: 131  DKVLVLIFI 105
              +L+L FI
Sbjct: 1140 --LLILCFI 1146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,033,044
Number of Sequences: 219361
Number of extensions: 822220
Number of successful extensions: 1931
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)