ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
2ref|NM_188280.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
3dbj|AK070272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
4gb|AY106509.1| Zea mays PCO111208 mRNA sequence 168 1e-38
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
6dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
7emb|CT009689.5| Pig DNA sequence from clone CH242-266P8 on chrom... 46 0.11
8gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Can... 44 0.45
9gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cance... 44 0.45
10gb|AY842481.1| Homo sapiens growth associated protein 43 (GAP43)... 42 1.8
11gb|AC146448.4| Pan troglodytes BAC clone RP43-5H14 from 7, compl... 42 1.8
12gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complet... 42 1.8
13gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, comp... 42 1.8
14emb|BX322573.4| Human DNA sequence from clone RP11-343N7 on chro... 42 1.8
15emb|AL592294.15| Human DNA sequence from clone RP3-475G16 on chr... 42 1.8
16emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chro... 42 1.8
17emb|AL356155.10| Human DNA sequence from clone RP11-690P14 on ch... 42 1.8
18emb|AL355674.10| Human DNA sequence from clone RP11-171A24 on ch... 42 1.8
19emb|AL158044.17| Human DNA sequence from clone RP11-264C14 on ch... 42 1.8
20emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chro... 42 1.8
21emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chr... 42 1.8
22emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on ch... 42 1.8
23gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Canc... 42 1.8
24gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, compl... 42 1.8
25gb|AC012083.6| Homo sapiens 12 BAC RP11-864A19 (Roswell Park Can... 42 1.8
26gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Canc... 42 1.8
27gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complet... 42 1.8
28gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, compl... 42 1.8
29gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, compl... 42 1.8
30gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, comp... 42 1.8
31gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, com... 42 1.8
32gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, com... 42 1.8
33gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, com... 42 1.8
34gb|AC171368.3| Cavia porcellus clone CH234-176E17, complete sequ... 42 1.8
35gb|DP000004.1| Lemur catta target 1 genomic scaffold 42 1.8
36gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, comp... 42 1.8
37gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence 42 1.8
38gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-34... 42 1.8
39gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 42 1.8
40gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromo... 42 1.8
41gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, comple... 42 1.8
42gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, comple... 42 1.8
43gb|AC008938.9| Homo sapiens chromosome 16 clone CTD-2313J23, com... 42 1.8
44gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G... 42 1.8
45gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete... 42 1.8
46dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
47gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2... 42 1.8
48emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-9... 42 1.8
49emb|CR381534.20| Zebrafish DNA sequence from clone DKEY-246J7 in... 42 1.8
50emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 ... 42 1.8
51emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-8... 42 1.8
52dbj|AP003402.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
53dbj|AP001691.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.8
54dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.8
55gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chrom... 42 1.8
56gb|AC002112.1|AC002112 Genomic sequence from Human 6, complete s... 42 1.8
57dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.8
58dbj|AP000948.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.8
59gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 7.1
60gb|AC169701.1| Rhesus Macaque BAC CH250-11P19 (Children's Hospi... 40 7.1
61gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
62gb|AC004458.1| Homo sapiens BAC clone CTB-57J11 from 7, complete... 40 7.1
63gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, com... 40 7.1
64gb|AC007558.3| Homo sapiens BAC clone RP11-148A10 from 7, comple... 40 7.1
65ref|NM_214606.1| Strongylocentrotus purpuratus speract protein (... 40 7.1
66emb|AL513204.10| Human DNA sequence from clone RP11-418B8 on chr... 40 7.1
67emb|AL450423.9| Human DNA sequence from clone RP11-190J12 on chr... 40 7.1
68emb|AL512822.6| Human DNA sequence from clone RP11-553L21 on chr... 40 7.1
69emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on ch... 40 7.1
70emb|AL354749.6| Human DNA sequence from clone RP11-156D10 on chr... 40 7.1
71gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
72gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, comp... 40 7.1
73gb|AC099787.2| Homo sapiens chromosome 1 clone RP4-538N4, comple... 40 7.1
74gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, compl... 40 7.1
75emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in ... 40 7.1
76gb|AC099687.5| Homo sapiens chromosome 11, clone CTD-2507G9, com... 40 7.1
77gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, comp... 40 7.1
78gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, com... 40 7.1
79gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cance... 40 7.1
80gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, comple... 40 7.1
81gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, comp... 40 7.1
82gb|AC025472.4| Homo sapiens chromosome 5 clone RP11-15G6, comple... 40 7.1
83gb|AC013828.10| Homo sapiens chromosome , clone RP11-23B7, compl... 40 7.1
84gb|AC026199.6| Homo sapiens chromosome 3 clone RP11-507D6 map 3p... 40 7.1
85gb|AC008539.6| Homo sapiens chromosome 5 clone CTC-493L21, compl... 40 7.1
86ref|XM_625268.1| PREDICTED: Apis mellifera hypothetical protein ... 40 7.1
87dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
88gb|AC105384.3| Homo sapiens BAC clone RP11-89B16 from 4, complet... 40 7.1
89gb|AC017080.8| Homo sapiens BAC clone RP11-469G4 from 2, complet... 40 7.1
90gb|AC069247.5|AC069247 Homo sapiens chromosome 3 clone RP11-489O... 40 7.1
91gb|AC025752.8| Homo sapiens chromosome 5 clone CTC-430J12, compl... 40 7.1
92gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Canc... 40 7.1
93dbj|AK071184.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
94emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-3... 40 7.1
95dbj|AP003028.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.1
96emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chr... 40 7.1
97gb|AC066585.6| Homo sapiens chromosome 3 clone RP11-24B16 map 3p... 40 7.1
98gb|J02896.1|SUSSPERA S.purpuratus speract egg protein mRNA, comp... 40 7.1 
>dbj|AK104558.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H08, full
           insert sequence
          Length = 1102

 Score =  268 bits (135), Expect = 2e-68
 Identities = 238/272 (87%), Gaps = 4/272 (1%)
 Strand = Plus / Minus

                                                                       
Query: 251 tttgagacacctgggatagttgatggatcaactaggtagacaggaattcaatcagtcgcc 310
           ||||||||| ||||||||| |||||| ||| |||| |||    | |||||||||||||||
Sbjct: 850 tttgagacagctgggatagatgatgggtcatctagatag----gtattcaatcagtcgcc 795

                                                                       
Query: 311 tgtcaagatcaaagtgctggcagagaagcttcttggtaacttttggcacgaatacttttg 370
           ||||||| || ||||||||||||||||| ||||| |||| ||||||||| ||||||||||
Sbjct: 794 tgtcaaggtcgaagtgctggcagagaagtttctttgtaatttttggcacaaatacttttg 735

                                                                       
Query: 371 ttccgtttccgatttctgggagccgagcaacttcagtcgccttgtcaaacagtatataag 430
            | | ||   |||||||||||  || ||||||||||| ||||||||||| ||||||||||
Sbjct: 734 attcattcatgatttctgggaatcgtgcaacttcagtggccttgtcaaagagtatataag 675

                                                                       
Query: 431 tgggaagatgatcccacatggatattccaaacctcgctgcagcatttggaaaatgcccta 490
           |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
Sbjct: 674 tgggaagatgatcccacatggatattccaaactttgctgcagcatttggaaaatgcccaa 615

                                           
Query: 491 tatcaactaatccaaaagaaatgttcttgtta 522
            ||||| || |||||| |||||||||||||||
Sbjct: 614 gatcaattattccaaacgaaatgttcttgtta 583



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 67/79 (84%), Gaps = 2/79 (2%)
 Strand = Plus / Minus

                                                                       
Query: 151 aaacccattgaataaaacaagcttggaagatacccccgtgaagtactcgcttccacacaa 210
           |||| ||| ||||||||||||||| |||||||||||| ||||||  | ||| || |||||
Sbjct: 960 aaactcatagaataaaacaagctt-gaagataccccc-tgaagtgattgctgccgcacaa 903

                              
Query: 211 ctgtctggtccatttatct 229
           ||||| ||| |||| ||||
Sbjct: 902 ctgtccggttcattcatct 884
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>ref|NM_188280.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score =  262 bits (132), Expect = 1e-66
 Identities = 210/236 (88%)
 Strand = Plus / Minus

                                                                       
Query: 287 tagacaggaattcaatcagtcgcctgtcaagatcaaagtgctggcagagaagcttcttgg 346
           |||| ||| |||||||||||||||||||||| || ||||||||||||||||| ||||| |
Sbjct: 775 tagataggtattcaatcagtcgcctgtcaaggtcgaagtgctggcagagaagtttctttg 716

                                                                       
Query: 347 taacttttggcacgaatacttttgttccgtttccgatttctgggagccgagcaacttcag 406
           ||| ||||||||| |||||||||| | | ||   |||||||||||  || ||||||||||
Sbjct: 715 taatttttggcacaaatacttttgattcattcatgatttctgggaatcgtgcaacttcag 656

                                                                       
Query: 407 tcgccttgtcaaacagtatataagtgggaagatgatcccacatggatattccaaacctcg 466
           | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 655 tggccttgtcaaagagtatataagtgggaagatgatcccacatggatattccaaactttg 596

                                                                   
Query: 467 ctgcagcatttggaaaatgccctatatcaactaatccaaaagaaatgttcttgtta 522
           |||||||||||||||||||||| | ||||| || |||||| |||||||||||||||
Sbjct: 595 ctgcagcatttggaaaatgcccaagatcaattattccaaacgaaatgttcttgtta 540
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>dbj|AK070272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043M23, full
           insert sequence
          Length = 1167

 Score =  260 bits (131), Expect = 4e-66
 Identities = 237/272 (87%), Gaps = 4/272 (1%)
 Strand = Plus / Minus

                                                                       
Query: 251 tttgagacacctgggatagttgatggatcaactaggtagacaggaattcaatcagtcgcc 310
           ||||||||| ||||||||| |||||| ||| |||| |||    | |||||||||||||||
Sbjct: 864 tttgagacagctgggatagatgatgggtcatctagatag----gtattcaatcagtcgcc 809

                                                                       
Query: 311 tgtcaagatcaaagtgctggcagagaagcttcttggtaacttttggcacgaatacttttg 370
           ||||||| || ||||||||||||||||| ||||| |||| ||||||||| ||||||||||
Sbjct: 808 tgtcaaggtcgaagtgctggcagagaagtttctttgtaatttttggcacaaatacttttg 749

                                                                       
Query: 371 ttccgtttccgatttctgggagccgagcaacttcagtcgccttgtcaaacagtatataag 430
            | | ||   |||||||||||  || ||||||||||| ||||||||||| |||| |||||
Sbjct: 748 attcattcatgatttctgggaatcgtgcaacttcagtggccttgtcaaagagtacataag 689

                                                                       
Query: 431 tgggaagatgatcccacatggatattccaaacctcgctgcagcatttggaaaatgcccta 490
           |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
Sbjct: 688 tgggaagatgatcccacatggatattccaaactttgctgcagcatttggaaaatgcccaa 629

                                           
Query: 491 tatcaactaatccaaaagaaatgttcttgtta 522
            ||||| || |||||| |||||||||||||||
Sbjct: 628 gatcaattattccaaacgaaatgttcttgtta 597



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 67/79 (84%), Gaps = 2/79 (2%)
 Strand = Plus / Minus

                                                                       
Query: 151 aaacccattgaataaaacaagcttggaagatacccccgtgaagtactcgcttccacacaa 210
           |||| ||| ||||||||||||||| |||||||||||| ||||||  | ||| || |||||
Sbjct: 974 aaactcatagaataaaacaagctt-gaagataccccc-tgaagtgattgctgccgcacaa 917

                              
Query: 211 ctgtctggtccatttatct 229
           ||||| ||| |||| ||||
Sbjct: 916 ctgtccggttcattcatct 898
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>gb|AY106509.1| Zea mays PCO111208 mRNA sequence
          Length = 874

 Score =  168 bits (85), Expect = 1e-38
 Identities = 169/197 (85%)
 Strand = Plus / Minus

                                                                       
Query: 325 tgctggcagagaagcttcttggtaacttttggcacgaatacttttgttccgtttccgatt 384
           |||||||| ||||| ||||| |||||||||||||| |||||||||| | |  ||  ||||
Sbjct: 874 tgctggcaaagaagtttcttagtaacttttggcacaaatacttttgattcacttgtgatt 815

                                                                       
Query: 385 tctgggagccgagcaacttcagtcgccttgtcaaacagtatataagtgggaagatgatcc 444
           ||||| | ||||| |||||||||| |||||||||||| ||| |||||||| |||||||||
Sbjct: 814 tctggaaaccgagaaacttcagtcaccttgtcaaacaatatgtaagtggggagatgatcc 755

                                                                       
Query: 445 cacatggatattccaaacctcgctgcagcatttggaaaatgccctatatcaactaatcca 504
           ||||||||||| |||||| | |||||||||||||| |||||||| |  |||| |  ||||
Sbjct: 754 cacatggatatcccaaactttgctgcagcatttgggaaatgcccaaggtcaattgttcca 695

                            
Query: 505 aaagaaatgttcttgtt 521
           ||||| |||||||||||
Sbjct: 694 aaagagatgttcttgtt 678
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                           
Query: 443     cccacatggatattccaaacctcgctgcagcatttggaaaatgccctatatcaactaatc 502
               |||||||||||||||||||| | ||||||||||||||||||||||| | ||||| || ||
Sbjct: 5436144 cccacatggatattccaaactttgctgcagcatttggaaaatgcccaagatcaattattc 5436203

                                   
Query: 503     caaaagaaatgttcttgtta 522
               |||| |||||||||||||||
Sbjct: 5436204 caaacgaaatgttcttgtta 5436223



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                           
Query: 346     gtaacttttggcacgaatacttttgttccgtttccgatttctgggagccgagcaacttca 405
               |||| ||||||||| |||||||||| | | ||   |||||||||||  || |||||||||
Sbjct: 5435902 gtaatttttggcacaaatacttttgattcattcatgatttctgggaatcgtgcaacttca 5435961

                                                     
Query: 406     gtcgccttgtcaaacagtatataagtgggaagatgatc 443
               || ||||||||||| |||||||||||||||||||||||
Sbjct: 5435962 gtggccttgtcaaagagtatataagtgggaagatgatc 5435999



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 287     tagacaggaattcaatcagtcgcctgtcaagatcaaagtgctggcagagaagcttct 343
               |||| ||| |||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 5434862 tagataggtattcaatcagtcgcctgtcaaggtcgaagtgctggcagagaagtttct 5434918



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 67/79 (84%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                           
Query: 151     aaacccattgaataaaacaagcttggaagatacccccgtgaagtactcgcttccacacaa 210
               |||| ||| ||||||||||||||| |||||||||||| ||||||  | ||| || |||||
Sbjct: 5434636 aaactcatagaataaaacaagctt-gaagataccccc-tgaagtgattgctgccgcacaa 5434693

                                  
Query: 211     ctgtctggtccatttatct 229
               ||||| ||| |||| ||||
Sbjct: 5434694 ctgtccggttcattcatct 5434712
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1015E06
          Length = 164583

 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                         
Query: 443   cccacatggatattccaaacctcgctgcagcatttggaaaatgccctatatcaactaatc 502
             |||||||||||||||||||| | ||||||||||||||||||||||| | ||||| || ||
Sbjct: 32984 cccacatggatattccaaactttgctgcagcatttggaaaatgcccaagatcaattattc 33043

                                 
Query: 503   caaaagaaatgttcttgtta 522
             |||| |||||||||||||||
Sbjct: 33044 caaacgaaatgttcttgtta 33063



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                         
Query: 346   gtaacttttggcacgaatacttttgttccgtttccgatttctgggagccgagcaacttca 405
             |||| ||||||||| |||||||||| | | ||   |||||||||||  || |||||||||
Sbjct: 32742 gtaatttttggcacaaatacttttgattcattcatgatttctgggaatcgtgcaacttca 32801

                                                   
Query: 406   gtcgccttgtcaaacagtatataagtgggaagatgatc 443
             || ||||||||||| |||||||||||||||||||||||
Sbjct: 32802 gtggccttgtcaaagagtatataagtgggaagatgatc 32839



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 287   tagacaggaattcaatcagtcgcctgtcaagatcaaagtgctggcagagaagcttct 343
             |||| ||| |||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 31702 tagataggtattcaatcagtcgcctgtcaaggtcgaagtgctggcagagaagtttct 31758



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 67/79 (84%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                         
Query: 151   aaacccattgaataaaacaagcttggaagatacccccgtgaagtactcgcttccacacaa 210
             |||| ||| ||||||||||||||| |||||||||||| ||||||  | ||| || |||||
Sbjct: 31476 aaactcatagaataaaacaagctt-gaagataccccc-tgaagtgattgctgccgcacaa 31533

                                
Query: 211   ctgtctggtccatttatct 229
             ||||| ||| |||| ||||
Sbjct: 31534 ctgtccggttcattcatct 31552
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>emb|CT009689.5| Pig DNA sequence from clone CH242-266P8 on chromosome 17, complete
             sequence
          Length = 38080

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 313   tcaagatcaaagtgctggcagag 335
             |||||||||||||||||||||||
Sbjct: 14385 tcaagatcaaagtgctggcagag 14407
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>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 170799

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 314   caagatcaaagtgctggcagag 335
             ||||||||||||||||||||||
Sbjct: 40061 caagatcaaagtgctggcagag 40040
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>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179223

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 314   caagatcaaagtgctggcagag 335
             ||||||||||||||||||||||
Sbjct: 95221 caagatcaaagtgctggcagag 95200
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>gb|AY842481.1| Homo sapiens growth associated protein 43 (GAP43) gene, complete cds
          Length = 100848

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 24823 caagatcaaagtgctggcaga 24803
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>gb|AC146448.4| Pan troglodytes BAC clone RP43-5H14 from 7, complete sequence
          Length = 203611

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 176238 caagatcaaagtgctggcaga 176258
to top
>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence
          Length = 143427

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 314  caagatcaaagtgctggcaga 334
            |||||||||||||||||||||
Sbjct: 7760 caagatcaaagtgctggcaga 7740
to top
>gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, complete sequence
          Length = 183734

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 180576 caagatcaaagtgctggcaga 180596
to top
>emb|BX322573.4| Human DNA sequence from clone RP11-343N7 on chromosome X, complete
             sequence
          Length = 72675

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 68136 caagatcaaagtgctggcaga 68156
to top
>emb|AL592294.15| Human DNA sequence from clone RP3-475G16 on chromosome 1 Contains the 5'
              end of one variant of the ZSWIM5 gene for zinc finger SWIM
              domain containing 5 and four CpG islands, complete sequence
          Length = 177710

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 156146 caagatcaaagtgctggcaga 156126
to top
>emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chromosome 6, complete
              sequence
          Length = 157588

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 153519 caagatcaaagtgctggcaga 153499
to top
>emb|AL356155.10| Human DNA sequence from clone RP11-690P14 on chromosome 10 Contains
            the 3' end of a novel gene, the 5' end of a novel gene
            (FLJ39150, FLJ34077), the gene for a novel cyclin type
            protein (FLJ35041, FLJ10895) and two CpG islands,
            complete sequence
          Length = 73041

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 314  caagatcaaagtgctggcaga 334
            |||||||||||||||||||||
Sbjct: 2001 caagatcaaagtgctggcaga 2021
to top
>emb|AL355674.10| Human DNA sequence from clone RP11-171A24 on chromosome 9 Contains the
             5' end of the RORB gene for RAR-related orphan receptor B
             protein (RZRB, ROR-BETA), two novel genes and two CpG
             islands, complete sequence
          Length = 174874

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 97588 caagatcaaagtgctggcaga 97568
to top
>emb|AL158044.17| Human DNA sequence from clone RP11-264C14 on chromosome 10 Contains the
             5' end of the gene for a novel protein (MGC10848), the
             ITIH2 gene for inter-alpha (globulin) inhibitor, H2
             polypeptide (H2P), the KIN gene for KIN, antigenic
             determinant of recA protein homolog (mouse), the 3' end of
             the ATP5C1 gene for ATP synthase, H+ transporting,
             mitochondrial F1 complex, gamma polypeptide 1
             (ATP5C,ATP5CL1), a novel gene and two CpG islands,
             complete sequence
          Length = 174361

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 74721 caagatcaaagtgctggcaga 74701
to top
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part
             of a novel gene and a CpG island, complete sequence
          Length = 120529

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 39663 caagatcaaagtgctggcaga 39643
to top
>emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chromosome 6 Contains the 3'
              end of the SCA1 gene for spinocerebellar ataxia
              1n(olivopontocerebellar ataxia 1, autosomal dominant,
              ataxin 1), complete sequence
          Length = 113802

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 109530 caagatcaaagtgctggcaga 109510
to top
>emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on chromosome 1 Contains part
              of the gene for ortholog of human amyotrophic lateral
              sclerosis 2 (juvenile) chromosome region candidate 19
              (ALS2CR19) and a novel gene, complete sequence
          Length = 155204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    tagacaggaattcaatcagtc 307
              |||||||||||||||||||||
Sbjct: 124720 tagacaggaattcaatcagtc 124740
to top
>gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 48042 caagatcaaagtgctggcaga 48022
to top
>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence
          Length = 180483

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 50558 caagatcaaagtgctggcaga 50538
to top
>gb|AC012083.6| Homo sapiens 12 BAC RP11-864A19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166257

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 20123 caagatcaaagtgctggcaga 20143
to top
>gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114428

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 28603 caagatcaaagtgctggcaga 28623
to top
>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence
          Length = 110883

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 55240 caagatcaaagtgctggcaga 55260
to top
>gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, complete sequence
          Length = 168008

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 113871 caagatcaaagtgctggcaga 113891
to top
>gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, complete sequence
          Length = 168433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 89566 caagatcaaagtgctggcaga 89586
to top
>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence
          Length = 163962

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 314  caagatcaaagtgctggcaga 334
            |||||||||||||||||||||
Sbjct: 9063 caagatcaaagtgctggcaga 9043
to top
>gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, complete sequence
          Length = 149059

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 73686 caagatcaaagtgctggcaga 73666



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 10332 aagatcaaagtgctggcaga 10313
to top
>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence
          Length = 173368

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 71677 caagatcaaagtgctggcaga 71697
to top
>gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, complete sequence
          Length = 207256

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    tcaagatcaaagtgctggcag 333
              |||||||||||||||||||||
Sbjct: 153607 tcaagatcaaagtgctggcag 153587
to top
>gb|AC171368.3| Cavia porcellus clone CH234-176E17, complete sequence
          Length = 179405

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 475    tttggaaaatgccctatatca 495
              |||||||||||||||||||||
Sbjct: 128339 tttggaaaatgccctatatca 128359
to top
>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 653756 caagatcaaagtgctggcaga 653776
to top
>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 37133 caagatcaaagtgctggcaga 37113
to top
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence
          Length = 171058

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 151491 caagatcaaagtgctggcaga 151511
to top
>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence
          Length = 165591

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 42250 caagatcaaagtgctggcaga 42270
to top
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 716934 caagatcaaagtgctggcaga 716954
to top
>gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromosome unknown, complete
             sequence
          Length = 165832

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 18197 caagatcaaagtgctggcaga 18217
to top
>gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, complete sequence
          Length = 156618

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 102385 caagatcaaagtgctggcaga 102365
to top
>gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, complete sequence
          Length = 176982

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 151809 caagatcaaagtgctggcaga 151789
to top
>gb|AC008938.9| Homo sapiens chromosome 16 clone CTD-2313J23, complete sequence
          Length = 99486

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 313   tcaagatcaaagtgctggcag 333
             |||||||||||||||||||||
Sbjct: 16770 tcaagatcaaagtgctggcag 16750
to top
>gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G24, complete sequence
          Length = 163384

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 99590 caagatcaaagtgctggcaga 99570
to top
>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence
          Length = 157285

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 54595 caagatcaaagtgctggcaga 54615
to top
>dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-159N11, complete
              sequence
          Length = 177031

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 163385 caagatcaaagtgctggcaga 163405
to top
>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
              gene, partial cds, complete sequence
          Length = 188078

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 119832 caagatcaaagtgctggcaga 119812
to top
>emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-908D14 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169496

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 108876 caagatcaaagtgctggcaga 108896
to top
>emb|CR381534.20| Zebrafish DNA sequence from clone DKEY-246J7 in linkage group 20,
              complete sequence
          Length = 151308

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 412    ttgtcaaacagtatataagtgggaa 436
              |||||||||||||| ||||||||||
Sbjct: 115845 ttgtcaaacagtatctaagtgggaa 115821
to top
>emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 in linkage group 12,
              complete sequence
          Length = 183614

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 412    ttgtcaaacagtatataagtgggaa 436
              |||||||||||||| ||||||||||
Sbjct: 175756 ttgtcaaacagtatctaagtgggaa 175780
to top
>emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-860P2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201587

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 70369 caagatcaaagtgctggcaga 70389
to top
>dbj|AP003402.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-661I21, complete
            sequence
          Length = 187946

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 314  caagatcaaagtgctggcaga 334
            |||||||||||||||||||||
Sbjct: 9275 caagatcaaagtgctggcaga 9295
to top
>dbj|AP001691.1| Homo sapiens genomic DNA, chromosome 21q, section 35/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 161593 caagatcaaagtgctggcaga 161573
to top
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 218554 caagatcaaagtgctggcaga 218574
to top
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete
              sequence
          Length = 198239

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    caagatcaaagtgctggcaga 334
              |||||||||||||||||||||
Sbjct: 104140 caagatcaaagtgctggcaga 104120
to top
>gb|AC002112.1|AC002112 Genomic sequence from Human 6, complete sequence
          Length = 115967

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 31682 caagatcaaagtgctggcaga 31702
to top
>dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B697O17,
             LL56-APP region, complete sequence
          Length = 96067

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 40419 caagatcaaagtgctggcaga 40439
to top
>dbj|AP000948.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B53P19,
             LL56-APP region, complete sequence
          Length = 79834

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   caagatcaaagtgctggcaga 334
             |||||||||||||||||||||
Sbjct: 63413 caagatcaaagtgctggcaga 63393
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 373     ccgtttccgatttctgggag 392
               ||||||||||||||||||||
Sbjct: 1027136 ccgtttccgatttctgggag 1027117
to top
>gb|AC169701.1| Rhesus Macaque  BAC CH250-11P19 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 166264

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 115232 caagatcaaagtgctggcag 115251
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 168     caagcttggaagataccccc 187
               ||||||||||||||||||||
Sbjct: 2141972 caagcttggaagataccccc 2141953
to top
>gb|AC004458.1| Homo sapiens BAC clone CTB-57J11 from 7, complete sequence
          Length = 168056

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 155480 caagatcaaagtgctggcag 155499
to top
>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    atgatcccacatggatattc 457
              ||||||||||||||||||||
Sbjct: 115093 atgatcccacatggatattc 115112
to top
>gb|AC007558.3| Homo sapiens BAC clone RP11-148A10 from 7, complete sequence
          Length = 120141

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 27193 aagatcaaagtgctggcaga 27174
to top
>ref|NM_214606.1| Strongylocentrotus purpuratus speract protein (LOC373457), mRNA
          Length = 2150

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 300 aatcagtcgcctgtcaagatcaaa 323
           ||||||||| ||||||||||||||
Sbjct: 582 aatcagtcgtctgtcaagatcaaa 605
to top
>emb|AL513204.10| Human DNA sequence from clone RP11-418B8 on chromosome 10 Contains part
             of the NRG3 gene for neuregulin 3, complete sequence
          Length = 111173

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 89634 caagatcaaagtgctggcag 89615
to top
>emb|AL450423.9| Human DNA sequence from clone RP11-190J12 on chromosome 13, complete
             sequence
          Length = 116969

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 18348 caagatcaaagtgctggcag 18329
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>emb|AL512822.6| Human DNA sequence from clone RP11-553L21 on chromosome 1 Contains
            part of a novel gene, complete sequence
          Length = 56870

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  aagatcaaagtgctggcaga 334
            ||||||||||||||||||||
Sbjct: 4275 aagatcaaagtgctggcaga 4256
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>emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on chromosome 9 Contains the
              SPIN gene for spindlin, a heterogeneous nuclear
              ribonucleoprotein A1 (HNRPA1) pseudogene and a CpG island,
              complete sequence
          Length = 179155

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    gaccaaaacccattgaataaaaca 169
              ||||||||| ||||||||||||||
Sbjct: 170942 gaccaaaactcattgaataaaaca 170965
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>emb|AL354749.6| Human DNA sequence from clone RP11-156D10 on chromosome 10 Contains
             part of the NRG3 gene for neuregulin 3, complete sequence
          Length = 196000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 15357 caagatcaaagtgctggcag 15338
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   caagcttggaagataccccc 187
             ||||||||||||||||||||
Sbjct: 32266 caagcttggaagataccccc 32247
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>gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, complete sequence
          Length = 179246

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tcaagatcaaagtgctggca 332
              ||||||||||||||||||||
Sbjct: 132305 tcaagatcaaagtgctggca 132286
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>gb|AC099787.2| Homo sapiens chromosome 1 clone RP4-538N4, complete sequence
          Length = 177329

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 120846 caagatcaaagtgctggcag 120827
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>gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, complete sequence
          Length = 159964

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 159438 caagatcaaagtgctggcag 159457
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>emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in linkage group 14,
             complete sequence
          Length = 170416

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   cttgtcaaacagtatataag 430
             ||||||||||||||||||||
Sbjct: 56350 cttgtcaaacagtatataag 56369
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>gb|AC099687.5| Homo sapiens chromosome 11, clone CTD-2507G9, complete sequence
          Length = 167577

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   tcaagatcaaagtgctggca 332
             ||||||||||||||||||||
Sbjct: 28302 tcaagatcaaagtgctggca 28321
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>gb|AC112516.2| Homo sapiens chromosome 3 clone RP11-350F11, complete sequence
          Length = 184868

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 86964 aagatcaaagtgctggcaga 86945
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>gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, complete sequence
          Length = 185315

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 87790 aagatcaaagtgctggcaga 87809
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>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181345

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 114279 caagatcaaagtgctggcag 114260
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>gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, complete sequence
          Length = 169597

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 315  aagatcaaagtgctggcaga 334
            ||||||||||||||||||||
Sbjct: 9825 aagatcaaagtgctggcaga 9844
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>gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, complete sequence
          Length = 164479

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    tcaagatcaaagtgctggca 332
              ||||||||||||||||||||
Sbjct: 147459 tcaagatcaaagtgctggca 147478
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>gb|AC025472.4| Homo sapiens chromosome 5 clone RP11-15G6, complete sequence
          Length = 171744

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 160656 caagatcaaagtgctggcag 160637
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>gb|AC013828.10| Homo sapiens chromosome , clone RP11-23B7, complete sequence
          Length = 143577

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aagatcaaagtgctggcaga 334
              ||||||||||||||||||||
Sbjct: 115377 aagatcaaagtgctggcaga 115358
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>gb|AC026199.6| Homo sapiens chromosome 3 clone RP11-507D6 map 3p, complete sequence
          Length = 201531

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 14274 aagatcaaagtgctggcaga 14293
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>gb|AC008539.6| Homo sapiens chromosome 5 clone CTC-493L21, complete sequence
          Length = 138633

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    tcaagatcaaagtgctggca 332
              ||||||||||||||||||||
Sbjct: 126629 tcaagatcaaagtgctggca 126648
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>ref|XM_625268.1| PREDICTED: Apis mellifera hypothetical protein LOC551946
           (LOC551946), mRNA
          Length = 1000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tgttccgtttccgatttctg 388
           ||||||||||||||||||||
Sbjct: 155 tgttccgtttccgatttctg 136
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 168     caagcttggaagataccccc 187
               ||||||||||||||||||||
Sbjct: 2141984 caagcttggaagataccccc 2141965
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>gb|AC105384.3| Homo sapiens BAC clone RP11-89B16 from 4, complete sequence
          Length = 155324

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 94169 caagatcaaagtgctggcag 94150
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>gb|AC017080.8| Homo sapiens BAC clone RP11-469G4 from 2, complete sequence
          Length = 184012

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 90530 caagatcaaagtgctggcag 90511
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>gb|AC069247.5|AC069247 Homo sapiens chromosome 3 clone RP11-489O22 map 3p, complete sequence
          Length = 180234

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aagatcaaagtgctggcaga 334
              ||||||||||||||||||||
Sbjct: 116753 aagatcaaagtgctggcaga 116734
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>gb|AC025752.8| Homo sapiens chromosome 5 clone CTC-430J12, complete sequence
          Length = 189154

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    caagatcaaagtgctggcag 333
              ||||||||||||||||||||
Sbjct: 134053 caagatcaaagtgctggcag 134034
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>gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188894

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 10542 aagatcaaagtgctggcaga 10523
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>dbj|AK071184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082N23, full
           insert sequence
          Length = 1432

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 caagcttggaagataccccc 187
           ||||||||||||||||||||
Sbjct: 880 caagcttggaagataccccc 899
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>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206533

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   caagatcaaagtgctggcag 333
             ||||||||||||||||||||
Sbjct: 60555 caagatcaaagtgctggcag 60574
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>dbj|AP003028.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-446B2, complete
             sequence
          Length = 176320

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 33498 aagatcaaagtgctggcaga 33517
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>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete
             sequence
          Length = 231530

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   atcccacatggatattccaa 460
             ||||||||||||||||||||
Sbjct: 86921 atcccacatggatattccaa 86940
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>gb|AC066585.6| Homo sapiens chromosome 3 clone RP11-24B16 map 3p, complete sequence
          Length = 134862

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aagatcaaagtgctggcaga 334
             ||||||||||||||||||||
Sbjct: 56423 aagatcaaagtgctggcaga 56404
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>gb|J02896.1|SUSSPERA S.purpuratus speract egg protein mRNA, complete cds
          Length = 2150

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 300 aatcagtcgcctgtcaagatcaaa 323
           ||||||||| ||||||||||||||
Sbjct: 582 aatcagtcgtctgtcaagatcaaa 605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,170,556
Number of Sequences: 3902068
Number of extensions: 5170556
Number of successful extensions: 75556
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75257
Number of HSP's gapped (non-prelim): 294
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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