>ref|NM_188721.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1380

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 141  taaatccacccatgtatcgaagatgagcagagtgcttgcatgccgactcccaagaagtcc 200
            |||||||||||||||||||| || ||||| |||||||||| ||| || |||||||| |||
Sbjct: 1379 taaatccacccatgtatcgacgacgagcacagtgcttgcacgccaacgcccaagaaatcc 1320

                                 
Query: 201  ctagtctcctccctcccgacg 221
            ||||| ||||| |||||||||
Sbjct: 1319 ctagtttcctctctcccgacg 1299



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 258  acgtcgtacggcacgttcccggtggccgccgtgagctcgctcattgcgc 306
            |||||||| |||||||| |||| |||| |||||||||||||||||||||
Sbjct: 1253 acgtcgtaaggcacgttgccggcggcccccgtgagctcgctcattgcgc 1205

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                           
Query: 141     taaatccacccatgtatcgaagatgagcagagtgcttgcatgccgactcccaagaagtcc 200
               |||||||||||||||||||| || ||||| |||||||||| ||| || |||||||| |||
Sbjct: 7848678 taaatccacccatgtatcgacgacgagcacagtgcttgcacgccaacgcccaagaaatcc 7848619

                                    
Query: 201     ctagtctcctccctcccgacg 221
               ||||| ||||| |||||||||
Sbjct: 7848618 ctagtttcctctctcccgacg 7848598



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                
Query: 258     acgtcgtacggcacgttcccggtggccgccgtgagctcgctcattgcgc 306
               |||||||| |||||||| |||| |||| |||||||||||||||||||||
Sbjct: 7848552 acgtcgtaaggcacgttgccggcggcccccgtgagctcgctcattgcgc 7848504

>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                         
Query: 141   taaatccacccatgtatcgaagatgagcagagtgcttgcatgccgactcccaagaagtcc 200
             |||||||||||||||||||| || ||||| |||||||||| ||| || |||||||| |||
Sbjct: 43624 taaatccacccatgtatcgacgacgagcacagtgcttgcacgccaacgcccaagaaatcc 43565

                                  
Query: 201   ctagtctcctccctcccgacg 221
             ||||| ||||| |||||||||
Sbjct: 43564 ctagtttcctctctcccgacg 43544



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 258   acgtcgtacggcacgttcccggtggccgccgtgagctcgctcattgcgc 306
             |||||||| |||||||| |||| |||| |||||||||||||||||||||
Sbjct: 43498 acgtcgtaaggcacgttgccggcggcccccgtgagctcgctcattgcgc 43450

>dbj|AK107468.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B01, full
            insert sequence
          Length = 1783

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 141  taaatccacccatgtatcgaagatgagcagagtgcttgcatgccgactcccaagaagtcc 200
            |||||||||||||||||||| || ||||| |||||||||| ||| || |||||||| |||
Sbjct: 1628 taaatccacccatgtatcgacgacgagcacagtgcttgcacgccaacgcccaagaaatcc 1569

                                 
Query: 201  ctagtctcctccctcccgacg 221
            ||||| ||||| |||||||||
Sbjct: 1568 ctagtttcctctctcccgacg 1548



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 258  acgtcgtacggcacgttcccggtggccgccgtgagctcgctcattgcgc 306
            |||||||| |||||||| |||| |||| |||||||||||||||||||||
Sbjct: 1502 acgtcgtaaggcacgttgccggcggcccccgtgagctcgctcattgcgc 1454

>gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete sequence
          Length = 31404

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 310  ggtcgatcgcattgtgctggctcgcg 335
            ||||||||||| ||||||||||||||
Sbjct: 6841 ggtcgatcgcaatgtgctggctcgcg 6866

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 310     ggtcgatcgcattgtgctggctcgcg 335
               ||||||||||| ||||||||||||||
Sbjct: 2411269 ggtcgatcgcaatgtgctggctcgcg 2411294

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 310     ggtcgatcgcattgtgctggctcgcg 335
               ||||||||||| ||||||||||||||
Sbjct: 1905781 ggtcgatcgcaatgtgctggctcgcg 1905756

>ref|XM_419242.1| PREDICTED: Gallus gallus similar to troponin I slow skeletal muscle
           isoform (LOC421161), mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 ggctcgcgccgaaaggagct 347
           ||||||||||||||||||||
Sbjct: 124 ggctcgcgccgaaaggagct 143

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 245     cgccgacgagaacacgtcgt 264
               ||||||||||||||||||||
Sbjct: 2976868 cgccgacgagaacacgtcgt 2976887

>gb|AC102771.13| Mus musculus chromosome 1, clone RP23-175K23, complete sequence
          Length = 226416

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   tccctagtctcctccctccc 217
             ||||||||||||||||||||
Sbjct: 51896 tccctagtctcctccctccc 51915

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 245     cgccgacgagaacacgtcgt 264
               ||||||||||||||||||||
Sbjct: 1155571 cgccgacgagaacacgtcgt 1155590

>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
             complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   tctcctccctcccgacggcg 224
             ||||||||||||||||||||
Sbjct: 50066 tctcctccctcccgacggcg 50085

>gb|DQ397596.1| Cenarchaeum symbiosum clone C05E01, complete sequence
          Length = 42625

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 370  cgttgatccgcccggcggagttgg 393
            |||||||||||||||||| |||||
Sbjct: 3608 cgttgatccgcccggcggtgttgg 3631

>emb|BX324190.13| Zebrafish DNA sequence from clone CH211-220I18 in linkage group 23,
              complete sequence
          Length = 217060

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    actaaatccacccatgtatc 158
              ||||||||||||||||||||
Sbjct: 173140 actaaatccacccatgtatc 173121

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     cgccgacgagaacacgtcgt 264
               ||||||||||||||||||||
Sbjct: 1472345 cgccgacgagaacacgtcgt 1472326

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 205      tctcctccctcccgacggcg 224
                ||||||||||||||||||||
Sbjct: 19268234 tctcctccctcccgacggcg 19268253

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     tctcctccctcccgacggcg 224
               ||||||||||||||||||||
Sbjct: 5489397 tctcctccctcccgacggcg 5489416

>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 117585

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    tctcctccctcccgacggcg 224
              ||||||||||||||||||||
Sbjct: 108780 tctcctccctcccgacggcg 108761

>gb|AY105960.1| Zea mays PCO106742 mRNA sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 catgcatgatgaacatgcat 128
           ||||||||||||||||||||
Sbjct: 666 catgcatgatgaacatgcat 647

>gb|DQ309031.1| Bifidobacterium breve strain DSMZ 20213 bile salt hydrolase gene,
           complete cds
          Length = 951

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 catgatgaacatgcatgcca 132
           ||||||||||||||||||||
Sbjct: 496 catgatgaacatgcatgcca 477

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     tctcctccctcccgacggcg 224
               ||||||||||||||||||||
Sbjct: 5489386 tctcctccctcccgacggcg 5489405

>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 160556

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   tctcctccctcccgacggcg 224
             ||||||||||||||||||||
Sbjct: 42202 tctcctccctcccgacggcg 42221

>emb|Z78439.1|PBZ78439 P.barbatum 5.8S rRNA gene and ITS1 and ITS2 DNA
          Length = 592

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 gcccggcggagttgggcgcc 398
           ||||||||||||||||||||
Sbjct: 146 gcccggcggagttgggcgcc 165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,251,414
Number of Sequences: 3902068
Number of extensions: 2251414
Number of successful extensions: 34393
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34189
Number of HSP's gapped (non-prelim): 204
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)