ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart13g02 |
|---|---|
| Clone Library Name | barley_pub |
>HMT1_MAIZE (Q9FUN0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (ZmHMT-1) Length = 323 Score = 145 bits (365), Expect = 9e-35 Identities = 66/78 (84%), Positives = 72/78 (92%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 I +F+KQT+KAIAVYPNSGEVWDGRAKRWLPVEC G KSFDA+A+RWQEAGASL+GGCCR Sbjct: 245 ICEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKRWQEAGASLIGGCCR 304 Query: 365 TTPSTIRAVSKALKSRNG 312 TTPSTIRAVSK LK R G Sbjct: 305 TTPSTIRAVSKILKGRTG 322
>HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (AtHMT-1) Length = 326 Score = 114 bits (284), Expect = 2e-25 Identities = 49/76 (64%), Positives = 60/76 (78%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 IR F K T+KAI VYPNSGEVWDG+AK+WLP +CFG F+ A +W++ GA L+GGCCR Sbjct: 251 IRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCR 310 Query: 365 TTPSTIRAVSKALKSR 318 TTPSTI A+S+ LK R Sbjct: 311 TTPSTINAISRDLKRR 326
>HMT3_ARATH (Q8LAX0) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (AtHMT-3) Length = 347 Score = 85.5 bits (210), Expect = 9e-17 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 I ++ T K I VYPNSGEV+DG K+W+ E + F + +W++AGASL GGCCR Sbjct: 261 IISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSKWRDAGASLFGGCCR 320 Query: 365 TTPSTIRAVSKAL 327 TTP+TIRA++K L Sbjct: 321 TTPNTIRAIAKVL 333
>HMT2_ARATH (Q9M1W4) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (AtHMT-2) Length = 333 Score = 81.6 bits (200), Expect = 1e-15 Identities = 37/79 (46%), Positives = 50/79 (63%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 + + +K T K I VYPNSGE +D K W+ G + F + +W +AG SL+GGCCR Sbjct: 255 VLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCR 314 Query: 365 TTPSTIRAVSKALKSRNGL 309 TTP+TIRA+ K L +R L Sbjct: 315 TTPTTIRAIHKRLVNRRSL 333
>SMTA_ASTBI (P56707) Selenocysteine methyltransferase (EC 2.1.1.-)| (SECYS-methyltransferase) (SECYS-MT) Length = 338 Score = 74.3 bits (181), Expect = 2e-13 Identities = 36/71 (50%), Positives = 43/71 (60%) Frame = -1 Query: 533 KKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCRTTPS 354 KK T K I +YPNSGE +D K W + F + +W E+GASLVGGCCRTTP Sbjct: 259 KKVTAKPIVIYPNSGETYDAIRKEWGQNSGVTDEDFVSYVDKWCESGASLVGGCCRTTPD 318 Query: 353 TIRAVSKALKS 321 TIR + K L S Sbjct: 319 TIRGIYKILSS 329
>HMT3_MAIZE (Q9FUM8) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (ZmHMT-3) Length = 338 Score = 74.3 bits (181), Expect = 2e-13 Identities = 33/73 (45%), Positives = 45/73 (61%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 I +K T+K I +YPNSGE +DG K W+ F + W + GA+L+GGCCR Sbjct: 254 ILSIRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCR 313 Query: 365 TTPSTIRAVSKAL 327 TTP+TIRA+ + L Sbjct: 314 TTPNTIRAIHRTL 326
>HMT2_MAIZE (Q9FUM9) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) Length = 339 Score = 73.6 bits (179), Expect = 3e-13 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 I +K T+K I +YPNSGE +DG K W+ F + W + GA L+GGCCR Sbjct: 254 ILSIRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAVLIGGCCR 313 Query: 365 TTPSTIRAVSKAL-KSRN 315 TTP+TIRA+ + L KS N Sbjct: 314 TTPNTIRAIHRTLNKSPN 331
>HMT4_MAIZE (Q9FUM7) Homocysteine S-methyltransferase 4 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 4) (SMM:Hcy S-methyltransferase 4) (ZmHMT-4) Length = 342 Score = 72.4 bits (176), Expect = 8e-13 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVE-CFGRKSFDAMARRWQEAGASLVGGCC 369 I KK T K I VYPNSGE + W+ + G F + W+ AGA+L+GGCC Sbjct: 255 ILSIKKVTSKPIVVYPNSGETYVAETNEWVDSDGATGTDDFVSRVGEWRRAGAALIGGCC 314 Query: 368 RTTPSTIRAVSKALK 324 RT+P+T+RA+++A++ Sbjct: 315 RTSPATVRAIARAVR 329
>SAM4_YEAST (Q08985) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (S-adenosylmethionine metabolism protein 4) Length = 325 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = -1 Query: 515 AIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCRTTPSTIRAVS 336 A+ YPNSGEV+D K WLP S+D + +++ +GA ++GGCCRT+P I+ +S Sbjct: 260 ALLAYPNSGEVYDTEKKIWLP-NSDKLNSWDTVVKQYISSGARIIGGCCRTSPKDIQEIS 318 Query: 335 KALK 324 A+K Sbjct: 319 AAVK 322
>YM99_YEAST (Q04898) Hypothetical protein YMR321c| Length = 105 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = -1 Query: 515 AIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCRTTPSTIRAVS 336 A+ YPNSGEV+D K WLP S+D + +++ +GA ++GGCCRT+P I+ +S Sbjct: 40 ALLAYPNSGEVYDTEKKIWLP-NSDKLNSWDTVVKQYISSGARIIGGCCRTSPKDIQEIS 98 Query: 335 KALK 324 A+K Sbjct: 99 AAVK 102
>MMUM_ECOLI (Q47690) Homocysteine S-methyltransferase (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase) Length = 310 Score = 53.1 bits (126), Expect = 5e-07 Identities = 27/58 (46%), Positives = 36/58 (62%) Frame = -1 Query: 512 IAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCRTTPSTIRAV 339 + VYPNSGE +D +K W + D + + WQ AGA L+GGCCRTTP+ I A+ Sbjct: 250 LVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQ-WQAAGARLIGGCCRTTPADIAAL 306
>MHT1_YEAST (Q12525) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) Length = 324 Score = 48.1 bits (113), Expect = 2e-05 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = -1 Query: 512 IAVYPNSGEVWDGRAKRW-LPVECFGRKSFDAMARRWQEAGASLVGGCCRTTPSTIRAVS 336 + VYPNSGE+++ + K W P ++ +++ + GA ++GGCCRT+P I ++ Sbjct: 260 LLVYPNSGEIYNPKEKTWHRPTNKLD--DWETTVKKFVDNGARIIGGCCRTSPKDIAEIA 317 Query: 335 KAL 327 A+ Sbjct: 318 SAV 320
>METH_SALTY (P37586) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDA-----MARRWQEAG-ASL 384 +++ + E + +PN+G LP FG DA R W EAG ++ Sbjct: 257 VQELSRIAECYVTAHPNAG----------LP-NAFGEYDLDADTMAKQIREWAEAGFLNI 305 Query: 383 VGGCCRTTPSTIRAVSKAL 327 VGGCC TTP I A+S+A+ Sbjct: 306 VGGCCGTTPEHIAAMSRAV 324
>METH_ECOLI (P13009) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12-dependent isozyme) (MS) Length = 1226 Score = 41.2 bits (95), Expect = 0.002 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDA-----MARRWQEAG-ASL 384 +++ + E + +PN+G LP FG DA R W +AG ++ Sbjct: 257 VQELSRIAECYVTAHPNAG----------LP-NAFGEYDLDADTMAKQIREWAQAGFLNI 305 Query: 383 VGGCCRTTPSTIRAVSKALK 324 VGGCC TTP I A+S+A++ Sbjct: 306 VGGCCGTTPQHIAAMSRAVE 325
>METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1206 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/77 (35%), Positives = 38/77 (49%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 +R K ++V PN+G G P++ + +A+A E G SLVGGCC Sbjct: 244 LRHLSKHARIPVSVMPNAGLPVLGAKGAEYPLQ--PDELAEALAGFIAEFGLSLVGGCCG 301 Query: 365 TTPSTIRAVSKALKSRN 315 TTP IR V+ A+ N Sbjct: 302 TTPDHIREVAAAVARCN 318
>METH_VIBCH (Q9KUW9) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 38.5 bits (88), Expect = 0.012 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDA--MARR---WQEAG-ASL 384 + + + +E ++ +PN+G LP FG A MA W +AG +L Sbjct: 259 VEELSRISECYVSAHPNAG----------LP-NAFGEYDLSAEEMAEHIAEWAQAGFLNL 307 Query: 383 VGGCCRTTPSTIRAVSKALK 324 VGGCC TTP I A++KA++ Sbjct: 308 VGGCCGTTPEHIAAIAKAVE 327
>METH_MYCTU (O33259) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1192 Score = 38.5 bits (88), Expect = 0.012 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASLVGGCCR 366 +R + ++V PN+G G P+ + +A+A E G SLVGGCC Sbjct: 242 LRHLSRHARIPVSVMPNAGLPVLGAKGAEYPL--LPDELAEALAGFIAEFGLSLVGGCCG 299 Query: 365 TTPSTIRAVSKAL 327 TTP+ IR V+ A+ Sbjct: 300 TTPAHIREVAAAV 312
>METH_VIBVY (Q7MHB1) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 34.7 bits (78), Expect = 0.18 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSF--DAMA---RRWQEAG-ASL 384 + + + +E ++ +PN+G LP FG + MA + W ++G +L Sbjct: 259 VEELSRISETFVSTHPNAG----------LP-NAFGEYDLSPEEMAEHVKEWAQSGFLNL 307 Query: 383 VGGCCRTTPSTIRAVSKALKSRN 315 +GGCC TTP IR ++ A++ + Sbjct: 308 IGGCCGTTPEHIRHMAMAVEGES 330
>METH_VIBPA (Q87L95) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 34.7 bits (78), Expect = 0.18 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSF--DAMA---RRWQEAG-ASL 384 + + + +E ++ +PN+G LP FG + MA + W +G +L Sbjct: 259 VEELSRISESFVSAHPNAG----------LP-NAFGEYDLSPEDMAEHVKEWASSGFLNL 307 Query: 383 VGGCCRTTPSTIRAVSKALK 324 +GGCC TTP IR +++A++ Sbjct: 308 IGGCCGTTPEHIRQMAQAVE 327
>METH_VIBVU (Q8DCJ7) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 34.3 bits (77), Expect = 0.23 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSF--DAMA---RRWQEAG-ASL 384 + + + +E ++ +PN+G LP FG + MA + W ++G +L Sbjct: 259 VEELSRISETFVSTHPNAG----------LP-NAFGEYDLSPEEMAEHVKEWAQSGFLNL 307 Query: 383 VGGCCRTTPSTIRAVSKALK 324 +GGCC TTP IR ++ A++ Sbjct: 308 IGGCCGTTPEHIRHMAMAVE 327
>EXO84_KLULA (Q6CNM8) Exocyst complex component EXO84| Length = 720 Score = 33.5 bits (75), Expect = 0.40 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +3 Query: 126 NDIVIFLST--STYTRIHDDWITSAQFLSVHVSSTHHQTFYTSSGQHTLIRNRDSELLKK 299 ND+V+ + S T + + + ++V V S H +F S+ QHTL R+RD ++ K Sbjct: 341 NDVVLIAAPKPSKQTELTVSRFSPLRDVTVEVQSEHELSFNFSNKQHTLYRHRDPQVFSK 400
>METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS) Length = 1249 Score = 32.3 bits (72), Expect = 0.89 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFG-----RKSFDAMARRWQEAGASLV 381 + + K ++ I YPN+G LP G + D + ++ +++ Sbjct: 260 VDNMSKWSDSFIICYPNAG----------LPNALGGYDETPEEMADVLREFARDGLVNII 309 Query: 380 GGCCRTTPSTIRAVSKALK 324 GGCC TTP I A+ KA++ Sbjct: 310 GGCCGTTPDHINAMYKAVQ 328
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 32.3 bits (72), Expect = 0.89 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -3 Query: 456 AGGVLRPQELRRDGEEVAGGRRQPGGRMLPHDAVDHPGGV 337 AGG RP+ R G AGG +PGG P PGG+ Sbjct: 392 AGGAPRPEGQREGGYRPAGGPPRPGGAPRPGGFGGAPGGM 431
>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS) Length = 1265 Score = 31.6 bits (70), Expect = 1.5 Identities = 11/23 (47%), Positives = 19/23 (82%) Frame = -1 Query: 389 SLVGGCCRTTPSTIRAVSKALKS 321 ++VGGCC +TP IR +++A+K+ Sbjct: 318 NIVGGCCGSTPDHIREIAEAVKN 340
>NOS_DROME (Q27571) Nitric-oxide synthase (EC 1.14.13.39) (dNOS)| Length = 1349 Score = 31.6 bits (70), Expect = 1.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -3 Query: 408 VAGGRRQPGGRMLPHDAVDHPGGVQGAQ 325 ++G GG P VDHPGG QGAQ Sbjct: 70 LSGNPNGGGGDSSPSHEVDHPGGAQGAQ 97
>METH_VIBF1 (Q5E814) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Frame = -1 Query: 545 IRDFKKQTEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSF--DAMARR---WQEAG-ASL 384 + D + +E ++ +PN+G LP FG + MA W +G +L Sbjct: 260 VSDLSRISECYVSAHPNAG----------LP-NAFGEYDLSPEDMAEHVAEWASSGFLNL 308 Query: 383 VGGCCRTTPSTIRAVS 336 +GGCC TTP IR ++ Sbjct: 309 IGGCCGTTPEHIRQMA 324
>METH_VIBFI (Q9AJQ8) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 29.6 bits (65), Expect = 5.8 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Frame = -1 Query: 407 WQEAG-ASLVGGCCRTTPSTIRAVS 336 W +G +L+GGCC TTP IR ++ Sbjct: 300 WASSGFLNLIGGCCGTTPEHIRQMA 324
>EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)| Length = 561 Score = 29.6 bits (65), Expect = 5.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 405 PPPRHRVEALAAEALHRQPPLGSPVPD 485 PPP HR +AE+L R+P PVP+ Sbjct: 288 PPPPHRPRLPSAESLSRRPLPALPVPE 314
>ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 933 Score = 29.6 bits (65), Expect = 5.8 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Frame = -3 Query: 417 GEEVAGGRRQPGGRMLPHDAVDHPGG-VQG-AQEQERAVVISSSEVQSRGFV*ACVVLRR 244 G ++GGR +PGG M+ D V PGG +G Q + V+++ +++ A +L+ Sbjct: 23 GIAISGGRDRPGGSMVVSDVV--PGGPAEGRLQTGDHIVMVNGVSMENATSAFAIQILKT 80 Query: 243 C 241 C Sbjct: 81 C 81
>BHMT_RAT (O09171) Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)| Length = 407 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 416 ARRWQEAGASLVGGCCRTTPSTIRAVSKALKSRNG 312 AR G +GGCC P IRA+++ L G Sbjct: 285 AREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERG 319
>BHMT_MOUSE (O35490) Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)| Length = 407 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 416 ARRWQEAGASLVGGCCRTTPSTIRAVSKALKSRNG 312 AR G +GGCC P IRA+++ L G Sbjct: 285 AREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERG 319
>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF| 1) (6-deoxyerythronolide B synthase I) (DEBS 1) Length = 3491 Score = 29.3 bits (64), Expect = 7.6 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -1 Query: 515 AIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMARRWQEAGASL 384 ++ V+P G W+G A+ LPV F + A + AG S+ Sbjct: 2507 SVFVFPGQGAQWEGMARELLPVPVFAESIAECDAVLSEVAGFSV 2550
>BHMT_HUMAN (Q93088) Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)| Length = 406 Score = 29.3 bits (64), Expect = 7.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 416 ARRWQEAGASLVGGCCRTTPSTIRAVSKALKSRNG 312 AR G +GGCC P IRA+++ L G Sbjct: 285 AREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERG 319
>ALF_STRCO (Q9X8R6) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 343 Score = 29.3 bits (64), Expect = 7.6 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = -3 Query: 540 RLQEANGEGDRGVPEQRRGLGRESQAVAAGG-VLRPQELRRDGEEVAGGRRQPGGRMLPH 364 R EA G G++G G G VLRP+ L+ E +A QP G P Sbjct: 189 RTVEALGLGEKGRYLLAASFGNVHGVYKPGNVVLRPELLKELNEGIASKYGQPAGSK-PF 247 Query: 363 DAVDHPGGVQGAQE 322 D V H G A+E Sbjct: 248 DFVFHGGSGSTAEE 261
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 411 EVAGGRRQPGGRMLPHDAVDHPGGVQGAQEQERAVVISSSEVQSRG 274 + A GRR G LP P G +G ER VV+ + + +RG Sbjct: 1340 DAAVGRRVGAGPGLPERGEQRPVGRRGPVGHEREVVVGGAALPARG 1385
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 29.3 bits (64), Expect = 7.6 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = -3 Query: 531 EANGEGDRGVPEQRRGLGRESQAVAAGGVLRPQELRRDGEEVAGGRRQPGGRMLPHDAVD 352 ++ G+G R P G + A P R +GGR PGG P A Sbjct: 449 QSQGQGQRKHPYGHPGNAPSFPSDHANPGFNPYGAARPAGRPSGGRPGPGGNRGPASANR 508 Query: 351 HPGGVQG 331 PGG G Sbjct: 509 GPGGPGG 515
>METH_SYNY3 (Q55786) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1195 Score = 29.3 bits (64), Expect = 7.6 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 Query: 404 QEAGASLVGGCCRTTPSTIRAVSKALK 324 ++ G ++GGCC T P I+A++ K Sbjct: 284 EDLGVQVIGGCCGTRPDHIKALADIAK 310
>PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/65 (30%), Positives = 25/65 (38%) Frame = -3 Query: 522 GEGDRGVPEQRRGLGRESQAVAAGGVLRPQELRRDGEEVAGGRRQPGGRMLPHDAVDHPG 343 G G G P Q G G ++ + GG G AGG GG +L + G Sbjct: 143 GNGGSGAPGQPGGAGGDAGLIGNGGTGGKGGDGLVGSGAAGGVGGRGGWLLGNGGTGGAG 202 Query: 342 GVQGA 328 G GA Sbjct: 203 GAAGA 207
>PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/65 (30%), Positives = 25/65 (38%) Frame = -3 Query: 522 GEGDRGVPEQRRGLGRESQAVAAGGVLRPQELRRDGEEVAGGRRQPGGRMLPHDAVDHPG 343 G G G P Q G G ++ + GG G AGG GG +L + G Sbjct: 143 GNGGSGAPGQPGGAGGDAGLIGNGGTGGKGGDGLVGSGAAGGVGGRGGWLLGNGGTGGAG 202 Query: 342 GVQGA 328 G GA Sbjct: 203 GAAGA 207
>BHMT_PONPY (Q5RFG2) Betaine--homocysteine S-methyltransferase (EC 2.1.1.5)| Length = 406 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 416 ARRWQEAGASLVGGCCRTTPSTIRAVSKALKSRNG 312 AR G +GGCC P IRA+++ L G Sbjct: 285 AREAYNMGIRYIGGCCGFEPYHIRAIAEELAPERG 319
>LOXL1_HUMAN (Q08397) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 1) (LOL) Length = 574 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 486 GLGRESQAVAAGGVLRPQELRRDGEEVAGGRRQP 385 G+G + AVA+ GV+ P + R EE GG P Sbjct: 211 GVGAGAAAVASAGVIYPYQPRARYEEYGGGEELP 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,787,410 Number of Sequences: 219361 Number of extensions: 1498197 Number of successful extensions: 4034 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 3906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4022 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
