Clone Name | rbart13f07 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 121 bits (304), Expect = 9e-28 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 3/101 (2%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYD-DADCAAN--WQRQWDKWTAAYPSAQIYLGLPASEQK 312 P HV RALATG+ R+ VR Y+ D C N W+ WDKWTAAYP+ + Y+GL A ++ Sbjct: 198 PAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKS 257 Query: 311 VGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 258 HQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 104 bits (259), Expect = 1e-22 Identities = 53/113 (46%), Positives = 69/113 (61%), Gaps = 8/113 (7%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANW------QRQWDKWTAAYPSAQIYLGLPA 324 +PD +++AL T L RI VRFYDDA C+ N QW+KWTA YP + +YLGL A Sbjct: 192 FPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAA 251 Query: 323 SEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171 + K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 252 ANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 101 bits (252), Expect = 9e-22 Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 1/99 (1%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYPSAQIYLGLPAS-EQKV 309 YPD +E+ALATG+ RI VR + D C + + W+KW AA+P +++Y+GL AS EQ Sbjct: 189 YPDHRLEKALATGVFARIHVRMFGDEQCTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDS 248 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 249 AWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 78.6 bits (192), Expect = 8e-15 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 8/107 (7%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAA------NWQRQWDKWTAAYPSAQIYLGLPA 324 +PDR++ AL TGL ++V+FY++ C N W++WT + + +I+LGLPA Sbjct: 187 FPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPA 246 Query: 323 SEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + + G YV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 247 APEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 75.1 bits (183), Expect = 9e-14 Identities = 37/106 (34%), Positives = 68/106 (64%), Gaps = 7/106 (6%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPAS 321 +PD+ + AL TGL ++V+FY++ +C + N++R+W++WT+ P+ ++Y+GLPA+ Sbjct: 184 FPDKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWTSI-PAKKLYIGLPAA 242 Query: 320 EQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + G Y+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 243 KTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 72.8 bits (177), Expect = 5e-13 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 9/108 (8%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAA------NWQRQWDKWTAAYPSAQIYLGLPA 324 YPD H++ A+ TGL ++V+FY++ C N W++WT++ + Q++LG+PA Sbjct: 181 YPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSSQ-AKQVFLGVPA 239 Query: 323 SEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 S+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 240 SDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 71.6 bits (174), Expect = 1e-12 Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 8/99 (8%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYDD-----ADCAANWQRQWDKWTAAYPSAQIYLGLPASE 318 PD H++ A+ TGL ++V+FY++ AD A N W++WT A+P++++Y+GLPA+ Sbjct: 183 PDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWT-AFPTSKLYMGLPAAR 241 Query: 317 QKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210 + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 242 EAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 70.9 bits (172), Expect = 2e-12 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 8/107 (7%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYPSAQIYLGLPA 324 +PD+ AL TGL ++V+FY++ C N W++WT++ S ++GLPA Sbjct: 189 FPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGSFMGLPA 248 Query: 323 SEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 S G ++ L ++ V++++ YGGVM+W +Y D ++ YSS Sbjct: 249 SSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 70.1 bits (170), Expect = 3e-12 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 8/107 (7%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCA------ANWQRQWDKWTAAYPSAQIYLGLPA 324 +PDR + AL T ++++FY++ C+ N W+KWT + + + +LGLPA Sbjct: 190 FPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGLPA 249 Query: 323 SEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + + G Y+ P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 250 APEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 67.0 bits (162), Expect = 3e-11 Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 8/109 (7%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYDDADCAANWQR------QWDKWTAAYPSAQIYLGLPAS 321 PD H++ A+ TGL ++V+FY++ C + W++WT++ + Q++LG+PAS Sbjct: 188 PDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTSSQ-AKQLFLGVPAS 246 Query: 320 EQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180 G ++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 247 TAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 7/105 (6%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPASE 318 PD + A+ATGL ++V+FY++ C A N W++WT + QI+LGLPAS Sbjct: 186 PDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTTVQAN-QIFLGLPAST 244 Query: 317 QKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 G++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 245 DAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 62.0 bits (149), Expect = 8e-10 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 8/107 (7%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYPSAQIYLGLPA 324 +PD + AL+TGL ++V+FY++ C A N + W++W A + +I+LGLPA Sbjct: 182 FPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQWN-AIQAGKIFLGLPA 240 Query: 323 SEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 ++ G++ L V+ ++ + YGGVM+W ++ D YSS Sbjct: 241 AQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 60.1 bits (144), Expect = 3e-09 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 12/115 (10%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYDDADC---AANWQR---QWDKWT-AAYP-SAQIYLGLP 327 PD +++ A+ T IFVRFY+D C N QR W WT + YP ++L LP Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELP 252 Query: 326 ASEQKV---GYVHPKNLYYGVIQVV-QKAANYGGVMVWERYEDKRTNYSSYAIQW 174 AS+ GY+ P L V+ + Y G+ +W R DK T YS+ I++ Sbjct: 253 ASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKW------TAAYPSAQIYLGLPA 324 YPD V L + F++FY++ C+ + Q WD W + + +++LGLP Sbjct: 192 YPDASVGDLLENADIDFAFIQFYNNY-CSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPG 250 Query: 323 SEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 S G Y+ +L I + ++++GG+ +W+ Sbjct: 251 SASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 45.1 bits (105), Expect = 1e-04 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 20/107 (18%) Frame = -1 Query: 482 PDRHVERALATGLVGRIFVRFYDDADCAANWQRQW-----------DKWT-----AAYPS 351 PD+++ A++ IF++FY++ C+A ++W D W + P Sbjct: 212 PDKYLSHAISNSAFDFIFIQFYNNPSCSA---KRWVTNPKSVTYTVDDWVKYIRKSGNPL 268 Query: 350 AQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 222 A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 269 AKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWT--AAYPSAQIYLGLPASEQK 312 YPD V ++ + F++FY++ C+ N Q W+ W+ A S ++YLGLP S Sbjct: 182 YPDESVGDLMSQVDLDFAFIQFYNNY-CSLNQQFNWNSWSNYARGKSIKLYLGLPGSSSS 240 Query: 311 V--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 G+V + V+ ++ +++GG+ +W+ Sbjct: 241 AGSGFVGLSTV-QRVVASIKGDSSFGGISIWD 271
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 42.4 bits (98), Expect = 7e-04 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYPSA-----QIYLGLPAS 321 YPD + L+ + F++FY++ C+ N Q +D W+ SA ++++G+PA+ Sbjct: 189 YPDASLGDLLSKVPLDFAFIQFYNNY-CSINGQFNYDTWSKFADSAPNKNIKLFVGVPAT 247 Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 GYV L I+ ++ +++ GV +W+ Sbjct: 248 SNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 38.1 bits (87), Expect = 0.013 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 8/96 (8%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQRQWDKW------TAAYPSAQIYLGLPA 324 YPD V L + +F++FY++ + WD W + + ++++G+PA Sbjct: 193 YPDASVGPLLKQSEIDFVFIQFYNNYCNLGSSSFNWDTWLNYAETDSPNKNIKLFVGVPA 252 Query: 323 SEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 S + GY P + + + + +GG+ +W+ Sbjct: 253 SSRAAGSGYNDPSAVSQYLTSDILNSKYFGGISMWD 288
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 35.4 bits (80), Expect = 0.081 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQIYLGLP 327 +PD + L + + V+FY++ C+A WD W T+ + +I +P Sbjct: 198 FPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVKIMFTVP 256 Query: 326 ASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 S G YV L V + K ++YGGV VW+ Sbjct: 257 GSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 33.9 bits (76), Expect = 0.24 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Frame = -1 Query: 485 YPDRHVERALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQIYLGLP 327 +PD + L + + V+FY++ C+A WD W T+ + +I +P Sbjct: 198 FPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVKIMFTIP 256 Query: 326 ASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 S G YV L V + + ++YGGV VW+ Sbjct: 257 GSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.4 bits (67), Expect = 2.6 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -3 Query: 432 LCQVXXXXXXXRQLAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGG 262 LC L +A + GG + G + R A R+ RSS P RR GG Sbjct: 984 LCTDSLPETDDSLLCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGG 1042 Query: 261 AEGGQLWRGHGLGTLRGQADKLQQL 187 A GG RG G L+ A ++ L Sbjct: 1043 AHGG---RGRGRARLKSTASSIETL 1064
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 30/121 (24%) Frame = -1 Query: 470 VERALATGLVGRIFVRFYDDADCAANWQRQWDKW-------------------------- 369 V R G+V + + +DDA +++Q W+K+ Sbjct: 142 VTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKY 201 Query: 368 ----TAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRT 201 + YP ++ + S G + P+N ++ +++K G+ VW + + Sbjct: 202 FEMQRSNYPGGKVLVSF--STDNSGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMS 259 Query: 200 N 198 N Sbjct: 260 N 260
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>FLGE_CAUCR (P35806) Flagellar hook protein flgE| Length = 591 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 311 PSALTPAARGRSAPTDTPPSTCPTASASW 397 P+A+T + G APT TPP+ P +W Sbjct: 404 PTAITIKSSGYIAPTVTPPAVQPPTPPTW 432
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 392 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 285 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 365 AAYPSAQIYLGLPASEQKVGYV 300 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 9.9 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -3 Query: 381 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 220 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 9.9 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -3 Query: 381 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 220 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,381,813 Number of Sequences: 219361 Number of extensions: 1141535 Number of successful extensions: 4369 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4058 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4341 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)