ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103818.1| Zea mays PCO124949 mRNA sequence 151 3e-33
2gb|BT016262.1| Zea mays clone Contig95 mRNA sequence 143 6e-31
3ref|XM_477795.1| Oryza sativa (japonica cultivar-group), mRNA 119 9e-24
4dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
5dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
6dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 9e-24
7dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 m... 119 9e-24
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10ref|XM_809423.1| Trypanosoma cruzi strain CL Brener hypothetical... 50 0.007
11ref|XM_816110.1| Trypanosoma cruzi strain CL Brener hypothetical... 50 0.007
12ref|NM_123569.1| Arabidopsis thaliana peptidase AT5G42040 mRNA, ... 44 0.43
13gb|AY258413.1| Arabidopsis thaliana 26S proteasome subunit RPN12... 44 0.43
14emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chr... 42 1.7
15dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.7
16gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, co... 42 1.7
17gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.7
18gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.8
19ref|XM_816106.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.8
20ref|XM_809419.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.8
21emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chro... 40 6.8
22gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope gl... 40 6.8
23gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 6.8
24gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, compl... 40 6.8
25gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, comp... 40 6.8
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.8
27gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, compl... 40 6.8
28dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.8 
>gb|AY103818.1| Zea mays PCO124949 mRNA sequence
          Length = 1251

 Score =  151 bits (76), Expect = 3e-33
 Identities = 196/236 (83%)
 Strand = Plus / Minus

                                                                       
Query: 240 atctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttgaca 299
           ||||||||||||||||| |||||||||||||||||||| |||||    |||| ||| |  
Sbjct: 948 atctccttgcagggctgtgactccttcgccttctggaagaagacagcaccgttcttaatc 889

                                                                       
Query: 300 tcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaacata 359
           ||||| || ||||| ||||| | ||||||||   |||| || | ||| || |||||||||
Sbjct: 888 tcccattccgggtgctcctcagtgatgtactcgtgcagatcttggtcagaactgaacata 829

                                                                       
Query: 360 aacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcacccagct 419
           | ||| ||||| ||||| || |  || ||  ||||||| ||||| |||||||||||||| 
Sbjct: 828 agcatttgctttgcatcactcacagatagagaatcataccccttttcgctgcacccagcg 769

                                                                   
Query: 420 atctcgtctctaaccgttttggcgagaaggtccatgaagtatacgtaggtctcatg 475
           ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 768 atctcatctctaactgttttggcgagaaggtcgatgaagtaaacgtaggtctcatg 713
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>gb|BT016262.1| Zea mays clone Contig95 mRNA sequence
          Length = 1020

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Minus

                                                                       
Query: 240 atctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttgaca 299
           ||||||||||||||||| || ||||||||||||||||| |||||    |||| ||| |  
Sbjct: 742 atctccttgcagggctgtgattccttcgccttctggaagaagacagcaccgttcttaatc 683

                                                                       
Query: 300 tcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaacata 359
           ||||| || ||||| ||||| | ||||||||   |||| || | ||| || |||||||||
Sbjct: 682 tcccattccgggtgctcctcagtgatgtactcgtgcagatcttggtcagaactgaacata 623

                                                                       
Query: 360 aacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcacccagct 419
           | ||| ||||| ||||| || |  || ||  ||||||| ||||| |||||||||||||| 
Sbjct: 622 agcatttgctttgcatcactcacagatagagaatcataccccttttcgctgcacccagcg 563

                                                                   
Query: 420 atctcgtctctaaccgttttggcgagaaggtccatgaagtatacgtaggtctcatg 475
           ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 562 atctcatctctaactgttttggcgagaaggtcgatgaagtaaacgtaggtctcatg 507
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>ref|XM_477795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score =  119 bits (60), Expect = 9e-24
 Identities = 183/224 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 296
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 743 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 684

                                                                       
Query: 297 acatcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaac 356
           || ||||| || ||||| |||||||||||||||||  ||| ||| ||||| |||||||||
Sbjct: 683 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 624

                                                                       
Query: 357 ataaacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcaccca 416
           || | ||  ||  | || ||   ||||||||  |||||||| |||||||| ||||| |||
Sbjct: 623 atcagcacttgtcttgcttcagctattgacatataatcataacccttctcactgcaacca 564

                                                       
Query: 417 gctatctcgtctctaaccgttttggcgagaaggtccatgaagta 460
           || |  || ||||| || |||||||| ||||| |||||||||||
Sbjct: 563 gccagttcatctctgactgttttggcaagaagatccatgaagta 520
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>dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D03, full
           insert sequence
          Length = 1218

 Score =  119 bits (60), Expect = 9e-24
 Identities = 183/224 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 296
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 823 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 764

                                                                       
Query: 297 acatcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaac 356
           || ||||| || ||||| |||||||||||||||||  ||| ||| ||||| |||||||||
Sbjct: 763 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 704

                                                                       
Query: 357 ataaacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcaccca 416
           || | ||  ||  | || ||   ||||||||  |||||||| |||||||| ||||| |||
Sbjct: 703 atcagcacttgtcttgcttcagctattgacatataatcataacccttctcactgcaacca 644

                                                       
Query: 417 gctatctcgtctctaaccgttttggcgagaaggtccatgaagta 460
           || |  || ||||| || |||||||| ||||| |||||||||||
Sbjct: 643 gccagttcatctctgactgttttggcaagaagatccatgaagta 600
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>dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A10, full
           insert sequence
          Length = 1053

 Score =  119 bits (60), Expect = 9e-24
 Identities = 183/224 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 296
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 822 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 763

                                                                       
Query: 297 acatcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaac 356
           || ||||| || ||||| |||||||||||||||||  ||| ||| ||||| |||||||||
Sbjct: 762 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 703

                                                                       
Query: 357 ataaacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcaccca 416
           || | ||  ||  | || ||   ||||||||  |||||||| |||||||| ||||| |||
Sbjct: 702 atcagcacttgtcttgcttcagctattgacatataatcataacccttctcactgcaacca 643

                                                       
Query: 417 gctatctcgtctctaaccgttttggcgagaaggtccatgaagta 460
           || |  || ||||| || |||||||| ||||| |||||||||||
Sbjct: 642 gccagttcatctctgactgttttggcaagaagatccatgaagta 599
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>dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H08, full
           insert sequence
          Length = 1230

 Score =  119 bits (60), Expect = 9e-24
 Identities = 183/224 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 296
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 834 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 775

                                                                       
Query: 297 acatcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaac 356
           || ||||| || ||||| |||||||||||||||||  ||| ||| ||||| |||||||||
Sbjct: 774 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 715

                                                                       
Query: 357 ataaacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcaccca 416
           || | ||  ||  | || ||   ||||||||  |||||||| |||||||| ||||| |||
Sbjct: 714 atcagcacttgtcttgcttcagctattgacatataatcataacccttctcactgcaacca 655

                                                       
Query: 417 gctatctcgtctctaaccgttttggcgagaaggtccatgaagta 460
           || |  || ||||| || |||||||| ||||| |||||||||||
Sbjct: 654 gccagttcatctctgactgttttggcaagaagatccatgaagta 611
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>dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit12,
           complete cds
          Length = 1063

 Score =  119 bits (60), Expect = 9e-24
 Identities = 183/224 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacgctgccgtccttg 296
           |||||||||||||||||||| | |||||||||||||||||| ||||||   || ||||| 
Sbjct: 818 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacggaaccatccttt 759

                                                                       
Query: 297 acatcccactcggggtgttcctctgcgatgtactgccgcagttccttgtcggagctgaac 356
           || ||||| || ||||| |||||||||||||||||  ||| ||| ||||| |||||||||
Sbjct: 758 acctcccattcagggtgctcctctgcgatgtactggtgcaattctttgtcagagctgaac 699

                                                                       
Query: 357 ataaacatctgcttcgcatcgcttattgacaggtaatcatatcccttctcgctgcaccca 416
           || | ||  ||  | || ||   ||||||||  |||||||| |||||||| ||||| |||
Sbjct: 698 atcagcacttgtcttgcttcagctattgacatataatcataacccttctcactgcaacca 639

                                                       
Query: 417 gctatctcgtctctaaccgttttggcgagaaggtccatgaagta 460
           || |  || ||||| || |||||||| ||||| |||||||||||
Sbjct: 638 gccagttcatctctgactgttttggcaagaagatccatgaagta 595
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 237      ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 284
                |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 14474267 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 14474314



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 316      cctctgcgatgtactgccgcagttccttgtcggagctgaacat 358
                ||||||||||||||||  ||| ||| ||||| |||||||||||
Sbjct: 14474428 cctctgcgatgtactggtgcaattctttgtcagagctgaacat 14474470
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>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0673E01
          Length = 125909

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 237   ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 284
             |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 94598 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 94645



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 316   cctctgcgatgtactgccgcagttccttgtcggagctgaacat 358
             ||||||||||||||||  ||| ||| ||||| |||||||||||
Sbjct: 94759 cctctgcgatgtactggtgcaattctttgtcagagctgaacat 94801
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>ref|XM_809423.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507257.50) partial mRNA
          Length = 5997

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 329  ctgccgcagttccttgtcggagctg 353
            |||||||||||||||||||||||||
Sbjct: 2409 ctgccgcagttccttgtcggagctg 2385



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 329  ctgccgcagttccttgtcggagctg 353
            |||||||||||||||||||||||||
Sbjct: 1686 ctgccgcagttccttgtcggagctg 1662



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 329 ctgccgcagttccttgtcggagctg 353
           |||||||||||||||||||||||||
Sbjct: 963 ctgccgcagttccttgtcggagctg 939
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>ref|XM_816110.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510329.260) partial mRNA
          Length = 4551

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 329 ctgccgcagttccttgtcggagctg 353
           |||||||||||||||||||||||||
Sbjct: 963 ctgccgcagttccttgtcggagctg 939
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>ref|NM_123569.1| Arabidopsis thaliana peptidase AT5G42040 mRNA, complete cds
          Length = 480

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 402 ttctcgctgcacccagctatctcgtctctaaccgttttggcgagaaggtccatgaagtat 461
           ||||| ||||| |||||||| || |||||||  ||||| || |  || |||||||| || 
Sbjct: 254 ttctcactgcatccagctatttcatctctaatggtttttgccaagagatccatgaaatag 195

                                     
Query: 462 acgtaggtctcatgcggtgcggtttg 487
           ||||| |||||||  |||||||||||
Sbjct: 194 acgtaagtctcatcaggtgcggtttg 169
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>gb|AY258413.1| Arabidopsis thaliana 26S proteasome subunit RPN12b (RPN12b) mRNA,
           complete cds
          Length = 480

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 402 ttctcgctgcacccagctatctcgtctctaaccgttttggcgagaaggtccatgaagtat 461
           ||||| ||||| |||||||| || |||||||  ||||| || |  || |||||||| || 
Sbjct: 254 ttctcactgcatccagctatttcatctctaatggtttttgccaagagatccatgaaatag 195

                                     
Query: 462 acgtaggtctcatgcggtgcggtttg 487
           ||||| |||||||  |||||||||||
Sbjct: 194 acgtaagtctcatcaggtgcggtttg 169
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>emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chromosome 6 Contains the
             5' end of the HDAC2 gene for histone deacetylase 2 (human
             transcriptional regulator homolog RPD3, YAF1), two
             putative novel genes, a pseudogene similar to mouse D7Rp2e
             (DNA segment, Chr7, Roswell Park 2 complex, expressed) and
             a CpG island, complete sequence
          Length = 78366

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   ttgaaagaaaagagaggcaaa 175
             |||||||||||||||||||||
Sbjct: 12917 ttgaaagaaaagagaggcaaa 12937
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 208     caagggtctggttgatgacgggcgc 232
               |||||||||||| ||||||||||||
Sbjct: 4808975 caagggtctggtcgatgacgggcgc 4808951
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>gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, complete sequence
          Length = 96337

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   tggcgagaaggtccatgaagt 459
             |||||||||||||||||||||
Sbjct: 48730 tggcgagaaggtccatgaagt 48710
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 208     caagggtctggttgatgacgggcgc 232
               |||||||||||| ||||||||||||
Sbjct: 4813886 caagggtctggtcgatgacgggcgc 4813862
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 334     gcagttccttgtcggagctg 353
               ||||||||||||||||||||
Sbjct: 4057907 gcagttccttgtcggagctg 4057926
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>ref|XM_816106.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510329.220) partial mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 475  gcggtgcggtttgccgagcg 494
            ||||||||||||||||||||
Sbjct: 991  gcggtgcggtttgccgagcg 1010
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>ref|XM_809419.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507257.10) partial mRNA
          Length = 1210

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 475 gcggtgcggtttgccgagcg 494
           ||||||||||||||||||||
Sbjct: 134 gcggtgcggtttgccgagcg 153
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>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a
              eukaryotic translation initiation factor 4E binding protein
              pseudogene and part of a novel gene, complete sequence
          Length = 127913

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     cttttgacatttcacagtat 41
              ||||||||||||||||||||
Sbjct: 108580 cttttgacatttcacagtat 108561
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>gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope glycoprotein (env)
           gene, partial cds
          Length = 602

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  aaccaaaatagtacagctga 103
           ||||||||||||||||||||
Sbjct: 49  aaccaaaatagtacagctga 68
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    ggtgcggtttgccgagcgct 496
              ||||||||||||||||||||
Sbjct: 591603 ggtgcggtttgccgagcgct 591622
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>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence
          Length = 162574

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    agcactttggaaacagtggg 68
             ||||||||||||||||||||
Sbjct: 36157 agcactttggaaacagtggg 36176
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>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence
          Length = 163550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   tccacctcttcatgggaaattcag 147
             |||||||||||||||||| |||||
Sbjct: 47235 tccacctcttcatgggaatttcag 47258
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     agggctgcgactccttcgcc 269
               ||||||||||||||||||||
Sbjct: 7646676 agggctgcgactccttcgcc 7646695
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>gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, complete sequence
          Length = 209585

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   aattcagtccaaagttgaaagaaa 164
             |||||||||||||| |||||||||
Sbjct: 92931 aattcagtccaaagctgaaagaaa 92908
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>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   taatccacctcttcatgggaaatt 144
             |||||||||||||||| |||||||
Sbjct: 36400 taatccacctcttcattggaaatt 36377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,902,500
Number of Sequences: 3902068
Number of extensions: 4902500
Number of successful extensions: 102416
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102219
Number of HSP's gapped (non-prelim): 197
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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