ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 5e-81
2gb|DQ491004.1| Oryza sativa (japonica cultivar-group) immature p... 301 1e-78
3dbj|AK111507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
4gb|AY105320.1| Zea mays PCO096658 mRNA sequence 270 4e-69
5gb|BT016296.1| Zea mays clone Contig129 mRNA sequence 246 6e-62
6gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq... 165 2e-37
7gb|DQ268841.1| Solanum tuberosum clone 131G12 WD-40 repeat prote... 137 4e-29
8gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
13emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa... 133 6e-28
14emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e... 58 3e-05
15gb|AY108265.1| Zea mays PCO065847 mRNA sequence 50 0.007
16gb|AC008623.4| Homo sapiens chromosome 19 clone CTB-14D10, compl... 46 0.11
17gb|AC006540.2|AC006540 Homo sapiens chromosome 19, cosmid F23842... 46 0.11
18gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.45
19emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 i... 44 0.45
20ref|NM_127512.2| Arabidopsis thaliana nucleotide binding AT2G195... 42 1.8
21gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosom... 42 1.8
22gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosom... 42 1.8
23gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, c... 42 1.8
24gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, com... 42 1.8
25gb|AY128814.1| Arabidopsis thaliana putative WD-40 repeat protei... 42 1.8
26gb|AC108173.1| Homo sapiens chromosome 5 clone RP11-526L22, comp... 42 1.8
27dbj|AK080719.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 1.8
28gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 repea... 42 1.8
29emb|BX821712.1|CNS0A801 Arabidopsis thaliana Full-length cDNA Co... 42 1.8
30gb|AC093725.3| Homo sapiens BAC clone RP11-4O3 from 4, complete ... 42 1.8
31ref|NM_183176.1| Mus musculus RIKEN cDNA A930017M01 gene (A93001... 42 1.8
32gb|AC157693.2| Xenopus tropicalis clone ISB1-181F7, complete seq... 40 7.0
33ref|XM_483323.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
34gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, co... 40 7.0
35gb|AC112156.4| Mus musculus BAC clone RP24-103D6 from chromosome... 40 7.0
36ref|XM_774189.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.0
37gb|AC092808.2| Homo sapiens chromosome 1 clone RP11-360C2, compl... 40 7.0
38dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 7.0
39gb|AF518717.1| Phellodon tomentosus strain BG Thesis large subun... 40 7.0
40emb|CR389647.1| Gallus gallus finished cDNA, clone ChEST434l9 40 7.0
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
42gb|AC125035.3| Mus musculus chromosome UL clone RP23-328F24, com... 40 7.0
43dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
44emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 i... 40 7.0
45emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1... 40 7.0
46emb|AL670689.7| Mouse DNA sequence from clone RP23-269N5 on chro... 40 7.0
47emb|AL844844.8| Mouse DNA sequence from clone RP23-103D7 on chro... 40 7.0 
>dbj|AK111725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031P19, full
            insert sequence
          Length = 1730

 Score =  309 bits (156), Expect = 5e-81
 Identities = 264/300 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
            |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1464 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1405

                                                                        
Query: 280  atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatga 339
            ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1404 atcatactaggtatctgtgggtgccagtgcaattctttcaagtctttctggccctgatga 1345

                                                                        
Query: 340  acaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttcatctttgct 399
            |||||||||||||| ||||| ||||||||||| ||||  ||||| ||| ||||| |||| 
Sbjct: 1344 acaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctcatccttgcc 1285

                                                                        
Query: 400  ctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaattgtgagttga 459
            ||||| || || |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1284 ctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaattgtcagttga 1225

                                                                        
Query: 460  tgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccacagatgta 519
            || || || ||||||||||| |  ||||| | ||||||||||||||||||||||||||||
Sbjct: 1224 tggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccacagatgta 1165
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>gb|DQ491004.1| Oryza sativa (japonica cultivar-group) immature pollen 1 (RIP1) mRNA,
            complete cds
          Length = 1398

 Score =  301 bits (152), Expect = 1e-78
 Identities = 263/300 (87%)
 Strand = Plus / Minus

                                                                        
Query: 220  atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
            |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1379 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1320

                                                                        
Query: 280  atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatga 339
            ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1319 atcatactaggtatctgtggatgccagtgcaattctttcaagtctttctggccctgatga 1260

                                                                        
Query: 340  acaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttcatctttgct 399
            |||||||||||||| ||||| ||||||||||| ||||  ||||| ||| ||||| |||| 
Sbjct: 1259 acaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctcatccttgcc 1200

                                                                        
Query: 400  ctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaattgtgagttga 459
            ||||| || || |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1199 ctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaattgtcagttga 1140

                                                                        
Query: 460  tgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccacagatgta 519
            || || || ||||||||||| |  ||||| | ||||||||||||||||||||||||||||
Sbjct: 1139 tggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccacagatgta 1080
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>dbj|AK111507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E23, full
           insert sequence
          Length = 746

 Score =  293 bits (148), Expect = 3e-76
 Identities = 262/300 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220 atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
           |||||||| || |||||||||||||||| ||  ||| | ||||| ||||| || || | |
Sbjct: 498 atggttgtatcgatgttgctgggcatcaacatattgtatccatcagctgccgtagatatg 439

                                                                       
Query: 280 atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatga 339
           ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 438 atcatactaggtatctgtggatgccagtgcaattctttcaagtctttctggccctgatga 379

                                                                       
Query: 340 acaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttcatctttgct 399
           |||||||||||||| ||||| ||||||||||| ||||  ||||| ||| ||||| |||| 
Sbjct: 378 acaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctcatccttgcc 319

                                                                       
Query: 400 ctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaattgtgagttga 459
           ||||| || || |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 ctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaattgtcagttga 259

                                                                       
Query: 460 tgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccacagatgta 519
           || || || ||||||||||| |  ||||| | ||||||||||||||||||||||||||||
Sbjct: 258 tggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccacagatgta 199
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>gb|AY105320.1| Zea mays PCO096658 mRNA sequence
          Length = 1129

 Score =  270 bits (136), Expect = 4e-69
 Identities = 259/300 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
           |||||||| || |||||||| ||||||| |||||||||||||||   ||| ||||| | |
Sbjct: 758 atggttgtatcaatgttgctaggcatcaacacgttgaagccatcaattgccgttgatatg 699

                                                                       
Query: 280 atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatga 339
           ||||||   |||||||||||||||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 698 atcatcgacggtatctgtgggtgccagtgcagttctttcaagtctctctggccctgatga 639

                                                                       
Query: 340 acaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttcatctttgct 399
            ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 638 gcaaagagaagttgtgggggcaaatcttcaggtgcgtttgcctgctccttcatctttgct 579

                                                                       
Query: 400 ctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaattgtgagttga 459
           ||||| ||||| ||||| || |||||| |||||| |||||| ||||| ||||| ||||||
Sbjct: 578 ctgaactcagcctcctcctccgcatctctttccagtgaaaggtcccagattgttagttga 519

                                                                       
Query: 460 tgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccacagatgta 519
           |||||  | |||| |||||| || | ||||||||||||||| ||||| || | |||||||
Sbjct: 518 tgatcttcagatgttacagctaatgatgatgcttcatgtggactccactcgatagatgta 459
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>gb|BT016296.1| Zea mays clone Contig129 mRNA sequence
          Length = 1496

 Score =  246 bits (124), Expect = 6e-62
 Identities = 256/300 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
            |||||||| || |||||||| ||||||| |||||||||||||||   ||| ||||| | |
Sbjct: 1136 atggttgtatcaatgttgctaggcatcaacacgttgaagccatcaattgccgttgatatg 1077

                                                                        
Query: 280  atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatga 339
            ||||||   |||||||||||||||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 1076 atcatcgacggtatctgtgggtgccagtgcagttctttcaagtctctctggccctgatga 1017

                                                                        
Query: 340  acaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttcatctttgct 399
             ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 1016 gcaaagagaagttgtgggggcaaatcttcaggtgcgtttgcctgctccttcatctttgct 957

                                                                        
Query: 400  ctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaattgtgagttga 459
            ||||| ||||| ||||| || |||||| |||||| |||||| ||||| ||  | || |||
Sbjct: 956  ctgaactcagcctcctcctccgcatctctttccagtgaaaggtcccagatgtttaggtga 897

                                                                        
Query: 460  tgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccacagatgta 519
            |||||  | |||| |||||| || | ||||||||||||||| ||||| || | |||||||
Sbjct: 896  tgatcttcagatgttacagctaatgatgatgcttcatgtggactccactcgatagatgta 837
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>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                         
Query: 332   cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
             |||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 31867 cctgatgagcaaagagaagttgtgggggcaaatcctcaggtgcatttgcctgctctttca 31808

                                                                    
Query: 392   tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatccca 446
             ||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 31807 tctttgctctgaactcagcctcctcttctgcatctctttccaatgaaaggtccca 31753



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                         
Query: 220   atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
             |||||||| || |||||||| ||||||||||||||||| |||||   ||| ||||| | |
Sbjct: 32113 atggttgtatcaatgttgctaggcatcagcacgttgaatccatcaattgccgttgatatg 32054

                                                                     
Query: 280   atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
             ||||||   |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 32053 atcatcgacggtatctgtgggtgccagtgcagttctttcaagtctttctggccctg 31998
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>gb|DQ268841.1| Solanum tuberosum clone 131G12 WD-40 repeat protein-like protein
            mRNA, complete cds
          Length = 1556

 Score =  137 bits (69), Expect = 4e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 301  tgccagtgcaattctttcaaatctttctggccctgatgaacaaagagaagttgcgggggc 360
            |||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||| 
Sbjct: 1339 tgccagtgaagttctttcaaatctttctgaccctgatgaacaaagagaagttgtgggggt 1280

                                                                        
Query: 361  aaatcttcaggagcatttgcctgctctttcatctttgctctgaattcagcttcctcttct 420
            ||||||   ||||||||  | ||||||||||| || | | |||| || || |||||||||
Sbjct: 1279 aaatctgttggagcattgacttgctctttcattttagttttgaactctgcctcctcttct 1220

                                                                        
Query: 421  gcatctttttccaatgaaagatcccaaattgtgagttgatgatcggccgatgatacagcc 480
             ||||| | ||||| ||||| ||||| ||||| || |||| ||| | |||||| ||||||
Sbjct: 1219 tcatctctctccaaagaaaggtcccagattgttagctgattatctgacgatgaaacagcc 1160

                                         
Query: 481  aaagttgatgcttcatgtgggctccattc 509
            |  ||||| |||||||| || ||||||||
Sbjct: 1159 agtgttgaggcttcatgcggactccattc 1131
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>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24,
              complete sequence
          Length = 162385

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                          
Query: 332    cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
              |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 127344 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 127403

                                                                         
Query: 392    tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
              || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 127404 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 127462



 Score =  119 bits (60), Expect = 9e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                          
Query: 220    atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
              |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 127060 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 127119

                                                                      
Query: 280    atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
              ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 127120 atcatactaggtatctgtgggtgccagtgcaattctttcaagtctttctggccctg 127175



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                          
Query: 454    agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
              |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 127589 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 127648

                    
Query: 514    gatgta 519
              ||||||
Sbjct: 127649 gatgta 127654
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                           
Query: 332     cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
               |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 1561740 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 1561799

                                                                          
Query: 392     tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
               || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1561800 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 1561858



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                           
Query: 220     atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
               |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1561456 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1561515

                                                                       
Query: 280     atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
               ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1561516 atcatactaggtatctgtggatgccagtgcaattctttcaagtctttctggccctg 1561571



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 454     agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
               |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 1561984 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 1562043

                     
Query: 514     gatgta 519
               ||||||
Sbjct: 1562044 gatgta 1562049
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                           
Query: 332     cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
               |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 1612808 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 1612867

                                                                          
Query: 392     tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
               || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1612868 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 1612926



 Score =  119 bits (60), Expect = 9e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                           
Query: 220     atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
               |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1612524 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1612583

                                                                       
Query: 280     atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
               ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1612584 atcatactaggtatctgtgggtgccagtgcaattctttcaagtctttctggccctg 1612639



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 454     agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
               |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 1613053 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 1613112

                     
Query: 514     gatgta 519
               ||||||
Sbjct: 1613113 gatgta 1613118
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                           
Query: 332     cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
               |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 1610529 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 1610588

                                                                          
Query: 392     tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
               || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1610589 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 1610647



 Score =  119 bits (60), Expect = 9e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                           
Query: 220     atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
               |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1610245 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1610304

                                                                       
Query: 280     atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
               ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1610305 atcatactaggtatctgtgggtgccagtgcaattctttcaagtctttctggccctg 1610360



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 454     agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
               |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 1610774 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 1610833

                     
Query: 514     gatgta 519
               ||||||
Sbjct: 1610834 gatgta 1610839
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                           
Query: 332     cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
               |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 1561740 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 1561799

                                                                          
Query: 392     tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
               || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1561800 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 1561858



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                           
Query: 220     atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
               |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 1561456 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 1561515

                                                                       
Query: 280     atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
               ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1561516 atcatactaggtatctgtggatgccagtgcaattctttcaagtctttctggccctg 1561571



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 454     agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
               |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 1561984 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 1562043

                     
Query: 514     gatgta 519
               ||||||
Sbjct: 1562044 gatgta 1562049
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>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183385

 Score =  133 bits (67), Expect = 6e-28
 Identities = 106/119 (89%)
 Strand = Plus / Minus

                                                                         
Query: 332   cctgatgaacaaagagaagttgcgggggcaaatcttcaggagcatttgcctgctctttca 391
             |||||||||||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||
Sbjct: 63992 cctgatgaacaaagagaagttgtgggggtaaatcttcaggggcatcagcctgttctctca 63933

                                                                        
Query: 392   tctttgctctgaattcagcttcctcttctgcatctttttccaatgaaagatcccaaatt 450
             || |||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 63932 tccttgccctgaactctgcctcctcttcagcatctttttccaatgaaagatcccaaatt 63874



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                         
Query: 220   atggttgtgtctatgttgctgggcatcagcacgttgaagccatccgctgctgttgacacg 279
             |||||||| || |||||||||||||||| ||  ||||| ||||| ||||| || || | |
Sbjct: 64276 atggttgtatcgatgttgctgggcatcaacatattgaatccatcagctgccgtagatatg 64217

                                                                     
Query: 280   atcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctg 335
             ||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 64216 atcatactaggtatctgtggatgccagtgcaattctttcaagtctttctggccctg 64161



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 454   agttgatgatcggccgatgatacagccaaagttgatgcttcatgtgggctccattccaca 513
             |||||||| || || ||||||||||| |  ||||| | ||||||||||||||||||||||
Sbjct: 63748 agttgatggtcagctgatgatacagctagtgttgacggttcatgtgggctccattccaca 63689

                   
Query: 514   gatgta 519
             ||||||
Sbjct: 63688 gatgta 63683
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>emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e1, COMPLETE SEQUENCE
          Length = 138194

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 253    ttgaagccatccgctgctgttgacacgatcatcccaggtatctgtgggtgccagtgcaat 312
              ||||| ||||| ||||| || || || ||||| ||||| |||| ||||||||||||||||
Sbjct: 130288 ttgaatccatctgctgcagtagatactatcattccaggaatctttgggtgccagtgcaat 130347

                   
Query: 313    tcttt 317
              |||||
Sbjct: 130348 tcttt 130352
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>gb|AY108265.1| Zea mays PCO065847 mRNA sequence
          Length = 386

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 220 atggttgtgtctatgttgctgggcatcagcacgttgaagcc 260
           |||||||| || |||||||| ||||||| ||||||||||||
Sbjct: 129 atggttgtatcgatgttgctaggcatcaacacgttgaagcc 89
to top
>gb|AC008623.4| Homo sapiens chromosome 19 clone CTB-14D10, complete sequence
          Length = 128266

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 73    aaaacgagaaacataaaatacatgata 99
             |||| ||||||||||||||||||||||
Sbjct: 10861 aaaaagagaaacataaaatacatgata 10887
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>gb|AC006540.2|AC006540 Homo sapiens chromosome 19, cosmid F23842, complete sequence
          Length = 34000

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 73   aaaacgagaaacataaaatacatgata 99
            |||| ||||||||||||||||||||||
Sbjct: 7575 aaaaagagaaacataaaatacatgata 7549
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 241     ggcatcagcacgttgaagccatccgc 266
               |||| |||||||||||||||||||||
Sbjct: 5722884 ggcaccagcacgttgaagccatccgc 5722909
to top
>emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 in linkage group 13,
             complete sequence
          Length = 210138

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 148   aagatattcagatattttataa 169
             ||||||||||||||||||||||
Sbjct: 80236 aagatattcagatattttataa 80257
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>ref|NM_127512.2| Arabidopsis thaliana nucleotide binding AT2G19540 mRNA, complete cds
          Length = 1619

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  gatcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatg 338
            ||||||||| || |||||   ||||||||| | ||| |||| |||||| || || || ||
Sbjct: 1371 gatcatccccggaatctggttgtgccagtgaagttccttcagatctttttgtccttggtg 1312

                                         
Query: 339  aacaaagagaagttgcgggggcaaatctt 367
            |||||||||||| || || ||||| ||||
Sbjct: 1311 aacaaagagaagctgaggaggcaagtctt 1283
to top
>gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosome 3, complete sequence
          Length = 138218

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 405   ttcagcttcctcttctgcatc 425
             |||||||||||||||||||||
Sbjct: 14994 ttcagcttcctcttctgcatc 14974
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>gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosome 15, complete sequence
          Length = 180985

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 399    tctgaattcagcttcctcttctgca 423
              |||||| ||||||||||||||||||
Sbjct: 161748 tctgaagtcagcttcctcttctgca 161724
to top
>gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, complete sequence
          Length = 125196

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 399   tctgaattcagcttcctcttctgca 423
             |||||| ||||||||||||||||||
Sbjct: 36230 tctgaagtcagcttcctcttctgca 36254
to top
>gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, complete sequence
          Length = 188017

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 405    ttcagcttcctcttctgcatc 425
              |||||||||||||||||||||
Sbjct: 163192 ttcagcttcctcttctgcatc 163172
to top
>gb|AY128814.1| Arabidopsis thaliana putative WD-40 repeat protein (At2g19540) mRNA,
            complete cds
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  gatcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatg 338
            ||||||||| || |||||   ||||||||| | ||| |||| |||||| || || || ||
Sbjct: 1329 gatcatccccggaatctggttgtgccagtgaagttccttcagatctttttgtccttggtg 1270

                                         
Query: 339  aacaaagagaagttgcgggggcaaatctt 367
            |||||||||||| || || ||||| ||||
Sbjct: 1269 aacaaagagaagctgaggaggcaagtctt 1241
to top
>gb|AC108173.1| Homo sapiens chromosome 5 clone RP11-526L22, complete sequence
          Length = 174346

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 426   tttttccaatgaaagatccca 446
             |||||||||||||||||||||
Sbjct: 56619 tttttccaatgaaagatccca 56599
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>dbj|AK080719.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930017M01 product:hypothetical protein, full
            insert sequence
          Length = 4279

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 399  tctgaattcagcttcctcttctgca 423
            |||||| ||||||||||||||||||
Sbjct: 2013 tctgaagtcagcttcctcttctgca 1989
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>gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 repeat protein (At2g19540;
            F3P11.14) mRNA, complete cds
          Length = 1617

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  gatcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatg 338
            ||||||||| || |||||   ||||||||| | ||| |||| |||||| || || || ||
Sbjct: 1371 gatcatccccggaatctggttgtgccagtgaagttccttcagatctttttgtccttggtg 1312

                                         
Query: 339  aacaaagagaagttgcgggggcaaatctt 367
            |||||||||||| || || ||||| ||||
Sbjct: 1311 aacaaagagaagctgaggaggcaagtctt 1283
to top
>emb|BX821712.1|CNS0A801 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL67ZB06 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1537

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  gatcatcccaggtatctgtgggtgccagtgcaattctttcaaatctttctggccctgatg 338
            ||||||||| || |||||   ||||||||| | ||| |||| |||||| || || || ||
Sbjct: 1366 gatcatccccggaatctggttgtgccagtgaagttccttcagatctttttgtccttggtg 1307

                                         
Query: 339  aacaaagagaagttgcgggggcaaatctt 367
            |||||||||||| || || ||||| ||||
Sbjct: 1306 aacaaagagaagctgaggaggcaagtctt 1278
to top
>gb|AC093725.3| Homo sapiens BAC clone RP11-4O3 from 4, complete sequence
          Length = 163796

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   tgaattcagcttcctcttctg 421
             |||||||||||||||||||||
Sbjct: 63753 tgaattcagcttcctcttctg 63773
to top
>ref|NM_183176.1| Mus musculus RIKEN cDNA A930017M01 gene (A930017M01Rik), mRNA
          Length = 4279

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 399  tctgaattcagcttcctcttctgca 423
            |||||| ||||||||||||||||||
Sbjct: 2013 tctgaagtcagcttcctcttctgca 1989
to top
>gb|AC157693.2| Xenopus tropicalis clone ISB1-181F7, complete sequence
          Length = 103707

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   agatattcagatattttata 168
             ||||||||||||||||||||
Sbjct: 96484 agatattcagatattttata 96503
to top
>ref|XM_483323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4323

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  tctttgctctgaattcagct 411
            ||||||||||||||||||||
Sbjct: 3958 tctttgctctgaattcagct 3939
to top
>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence
          Length = 236274

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 376   tttgcctgctctttcatctttgctctga 403
             ||||||||||||||||||| | ||||||
Sbjct: 76485 tttgcctgctctttcatctctcctctga 76458
to top
>gb|AC112156.4| Mus musculus BAC clone RP24-103D6 from chromosome 2, complete sequence
          Length = 175208

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 487   gatgcttcatgtgggctccattcc 510
             ||||||||||||||||| ||||||
Sbjct: 95103 gatgcttcatgtgggctgcattcc 95080
to top
>ref|XM_774189.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_587_50044_49331) partial mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  aaacataaaatacatgatac 100
           ||||||||||||||||||||
Sbjct: 672 aaacataaaatacatgatac 691
to top
>gb|AC092808.2| Homo sapiens chromosome 1 clone RP11-360C2, complete sequence
          Length = 151426

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    ttcagcttcctcttctgcat 424
              ||||||||||||||||||||
Sbjct: 135750 ttcagcttcctcttctgcat 135769
to top
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     tgcaattctttcaaatcttt 326
               ||||||||||||||||||||
Sbjct: 5666749 tgcaattctttcaaatcttt 5666768
to top
>gb|AF518717.1| Phellodon tomentosus strain BG Thesis large subunit ribosomal RNA
           gene, partial sequence; mitochondrial gene for
           mitochondrial product
          Length = 391

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 tttcatctttgctctgaatt 406
           ||||||||||||||||||||
Sbjct: 131 tttcatctttgctctgaatt 112
to top
>emb|CR389647.1| Gallus gallus finished cDNA, clone ChEST434l9
          Length = 676

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 396 tgctctgaattcagcttcct 415
           ||||||||||||||||||||
Sbjct: 571 tgctctgaattcagcttcct 552
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 392      tctttgctctgaattcagct 411
                ||||||||||||||||||||
Sbjct: 25460114 tctttgctctgaattcagct 25460095
to top
>gb|AC125035.3| Mus musculus chromosome UL clone RP23-328F24, complete sequence
          Length = 198197

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    tggttgtgtctatgttgctg 240
              ||||||||||||||||||||
Sbjct: 114513 tggttgtgtctatgttgctg 114494
to top
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   tctttgctctgaattcagct 411
             ||||||||||||||||||||
Sbjct: 91430 tctttgctctgaattcagct 91411
to top
>emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 in linkage group 3,
             complete sequence
          Length = 149711

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   agatattcagatattttata 168
             ||||||||||||||||||||
Sbjct: 80965 agatattcagatattttata 80946
to top
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 398   ctctgaattcagcttcctcttctg 421
             ||||| ||||||||||||||||||
Sbjct: 67660 ctctggattcagcttcctcttctg 67683
to top
>emb|AL670689.7| Mouse DNA sequence from clone RP23-269N5 on chromosome X, complete
             sequence
          Length = 195890

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   gaagatattcagatatttta 166
             ||||||||||||||||||||
Sbjct: 68001 gaagatattcagatatttta 68020
to top
>emb|AL844844.8| Mouse DNA sequence from clone RP23-103D7 on chromosome 2, complete
              sequence
          Length = 213953

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 487    gatgcttcatgtgggctccattcc 510
              ||||||||||||||||| ||||||
Sbjct: 170338 gatgcttcatgtgggctgcattcc 170361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,231,497
Number of Sequences: 3902068
Number of extensions: 5231497
Number of successful extensions: 110045
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109809
Number of HSP's gapped (non-prelim): 236
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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