>UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated protein 47)|
           (Protein unc-47)
          Length = 486

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 228 EFAAFVGSTVCALLSFVLPALFHLRVVGPTASTWARAVDYFFLLSGLVFAGHGMY 64
           E    VG+    +LSF+ PALFHL +   T + + +  D   ++ G      G+Y
Sbjct: 417 ELMGLVGNITGTMLSFIWPALFHLYIKEKTLNNFEKRFDQGIIIMGCSVCISGVY 471

>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -2

Query: 234 FGEFAAFVGSTVCALLSFVLPALFHLRVVGPTASTWARAVDYFFLLSGLVFAGHGM 67
           F +  AF+G+ +C  +  +LP  F+LR+   T   W R   +  +   +V +  G+
Sbjct: 541 FDKIIAFLGAGLCFTICLILPCWFYLRLCKTTIKPWERVACHVTICISVVLSTLGV 596

>AVT6_YEAST (P40074) Vacuolar amino acid transporter 6|
          Length = 448

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 219 AFVGSTVCALLSFVLPALFHLRVVGPTASTWARAVDYFFLLSGLVFAGHGMYTVLS 52
           A VG+T    +SF+LP LF  +++G    T        F  +GL+    G+  +++
Sbjct: 384 AIVGATGSTSISFILPGLFGYKLIGTEHKTAVPLTTKIFKYTGLLLFIWGLIIMIT 439

>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
            (Cav3.1c) (NBR13)
          Length = 2377

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 137  AVGPTTRRWKSAGSTKESSAHTV-LPTNAANSPN 235
            A+GP +RR  S+GS +  +AH +  P +A +SP+
Sbjct: 1061 ALGPASRRTSSSGSAEPGAAHEMKSPPSARSSPH 1094


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,416,711
Number of Sequences: 219361
Number of extensions: 454954
Number of successful extensions: 1735
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)