ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulga... 731 0.0
2gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding p... 402 e-109
3ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA 244 2e-61
4ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
5ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
6ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
7ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
8ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
9dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
10dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
11dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
12dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
13dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
14dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
15gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding prot... 244 2e-61
16gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyl... 230 3e-57
17ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
19dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
20emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ... 88 3e-14
21emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca... 88 3e-14
22emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene 78 3e-11
23emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlo... 72 2e-09
24emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chloro... 72 2e-09
25gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, c... 72 2e-09
26gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (L... 66 1e-07
27gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV ch... 52 0.002
28gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV ch... 52 0.002
29ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding ... 48 0.025
30gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence 48 0.025
31gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding prot... 48 0.025
32gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding prot... 48 0.025
33gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470... 48 0.025
34emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Co... 48 0.025
35emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Co... 48 0.025
36emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Co... 48 0.025
37gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete se... 48 0.025
38gb|AY109341.1| Zea mays CL4601_3 mRNA sequence 48 0.025
39gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chloro... 48 0.025
40gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana... 46 0.098
41emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b ... 44 0.39
42gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete... 42 1.5
43gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete... 42 1.5
44gb|AC112257.5| Mus musculus BAC clone RP23-43A18 from 16, comple... 42 1.5
45gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465 42 1.5
46gb|AC161815.4| Mus musculus BAC clone RP23-353C21 from chromosom... 42 1.5
47gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 42 1.5
48ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP000... 42 1.5
49gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G... 42 1.5
50gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, c... 42 1.5
51gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p... 42 1.5
52dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911 42 1.5
53emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.5
54gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35... 42 1.5
55gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complet... 42 1.5
56ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa852... 40 6.0
57gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.0
58emb|CR381632.8| Zebrafish DNA sequence from clone DKEY-265M15 in... 40 6.0
59emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chrom... 40 6.0
60ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.0
61gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.0
62ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-al... 40 6.0
63gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, comp... 40 6.0
64gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.0
65gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, com... 40 6.0
66emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 i... 40 6.0
67dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mR... 40 6.0
68gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga... 40 6.0
69gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.0
70dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
71gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complet... 40 6.0
72dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
73dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.0
74emb|BX088583.12| Zebrafish DNA sequence from clone CH211-211K8 i... 40 6.0
75gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, c... 40 6.0
76gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p... 40 6.0
77dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
78gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide syn... 40 6.0 
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 939 nt]
          Length = 939

 Score =  731 bits (369), Expect = 0.0
 Identities = 433/450 (96%), Gaps = 12/450 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaatgcttcaaactagtagtatgttttgccatgttttaaaataacacgcatgggtg-at 59
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 935 ctaatgcttcaaactagtagtatgttttgccatgttttaaaataacacgcatgggtatat 876

                                                                       
Query: 60  attacaagtacagcctccgtcggaagccatgggcgaatccacaaggacaaagtttcacca 119
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 attacaagtacagc-tccgtcggaagccatgggcgaatccacaaggacaaagtttcacca 817

                                                                       
Query: 120 ccggaactttaagattacaacacgtttttgcactgccacctactcctccacactttgtac 179
           |||||||      |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ccggaac------attacaacacgtttttgcactgccacctactcctccacactttgtac 763

                                                                       
Query: 180 atcctcagcaccccaaaataataattcagaccacctgaatcctccttggtcggtgaaatc 239
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 762 atcctcagcaccccaaaataataattcagaccacctaaa-cctccttggtcggtgaaatc 704

                                                                       
Query: 240 gacggatttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gacggatttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggt 644

                                                                       
Query: 300 gctgctgcaggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaacccca 359
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 643 gctgctgcaggttctcgaacggccccttcccgtgcacgttgtgctgcaccaggaacccca 584

                                                                       
Query: 360 ggaacgccagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgg 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 583 ggaacgccagcatggccagtctcccgttggcgagctccttctccttgttctcgag---gg 527

                                         
Query: 420 gggcgaagttgagggggttgaagacgctgc 449
           ||||||||||||||||||||||||| ||||
Sbjct: 526 gggcgaagttgagggggttgaagactctgc 497
to top
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 687

 Score =  402 bits (203), Expect = e-109
 Identities = 203/203 (100%)
 Strand = Plus / Minus

                                                                       
Query: 247 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 628

                                                                       
Query: 307 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 568

                                                                       
Query: 367 cagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgggggcgaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgggggcgaa 508

                                  
Query: 427 gttgagggggttgaagacgctgc 449
           |||||||||||||||||||||||
Sbjct: 507 gttgagggggttgaagacgctgc 485
to top
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1070

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 608

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 607 acgctgc 601
to top
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 611 acgctgc 605
to top
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 611 acgctgc 605
to top
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1178

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 609

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 608 acgctgc 602
to top
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1188

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 608

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 607 acgctgc 601
to top
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1191

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 790 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 731

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 730 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 671

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 670 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 611

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 610 acgctgc 604
to top
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full
           insert sequence
          Length = 1140

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 611 acgctgc 605
to top
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full
           insert sequence
          Length = 1177

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 609

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 608 acgctgc 602
to top
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full
           insert sequence
          Length = 1193

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 792 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 733

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 732 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 673

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 672 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 613

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 612 acgctgc 606
to top
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full
           insert sequence
          Length = 1190

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 789 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 730

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 729 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 670

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 669 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 610

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 609 acgctgc 603
to top
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full
           insert sequence
          Length = 1138

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 611 acgctgc 605
to top
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full
           insert sequence
          Length = 1078

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 796 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 737

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 736 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 677

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 676 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 617

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 616 acgctgc 610
to top
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1162

 Score =  244 bits (123), Expect = 2e-61
 Identities = 171/187 (91%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 754 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 695

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 694 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 635

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 634 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 575

                  
Query: 443 acgctgc 449
           |||||||
Sbjct: 574 acgctgc 568
to top
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding
           protein presusor mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1128

 Score =  230 bits (116), Expect = 3e-57
 Identities = 171/188 (90%), Gaps = 1/188 (0%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 767 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 708

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 707 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 648

                                                                       
Query: 383 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttga-gggggttgaa 441
           ||||||||||||||||||||||||  ||||||||||||  ||||||||| ||||||||||
Sbjct: 647 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgaggggggttgaa 588

                   
Query: 442 gacgctgc 449
           ||||||||
Sbjct: 587 gacgctgc 580
to top
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score =  218 bits (110), Expect = 1e-53
 Identities = 165/182 (90%), Gaps = 1/182 (0%)
 Strand = Plus / Plus

                                                                       
Query: 269 atgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttc 328
           ||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||||||||
Sbjct: 1   atgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggccccttc 60

                                                                       
Query: 329 ccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctccc-gtt 387
              |||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 61  tgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctccctgtt 120

                                                                       
Query: 388 ggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaagacgct 447
           |||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||
Sbjct: 121 ggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaagacgct 180

             
Query: 448 gc 449
           ||
Sbjct: 181 gc 182
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  147 bits (74), Expect = 4e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                            
Query: 263      gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
                ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 21164438 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 21164497

                                                                            
Query: 323      cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
                ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 21164498 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 21164557

                  
Query: 383      cc 384
                ||
Sbjct: 21164558 cc 21164559



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                            
Query: 383      ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
                ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 21164651 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 21164710

                       
Query: 443      acgctgc 449
                |||||||
Sbjct: 21164711 acgctgc 21164717
to top
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score =  147 bits (74), Expect = 4e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                          
Query: 263    gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
              ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 135648 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 135707

                                                                          
Query: 323    cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
              ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 135708 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 135767

                
Query: 383    cc 384
              ||
Sbjct: 135768 cc 135769



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                          
Query: 383    ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 442
              ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 135861 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 135920

                     
Query: 443    acgctgc 449
              |||||||
Sbjct: 135921 acgctgc 135927
to top
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 140/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 272 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 331
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 735 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 676

                                                                       
Query: 332 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 391
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 675 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 616

                                                               
Query: 392 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 443
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 615 agctccttctccttggcctccatggatggggagaagttgagagggttgaaga 564
to top
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 140/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 272 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 331
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 712 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 653

                                                                       
Query: 332 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 391
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 652 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 593

                                                               
Query: 392 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 443
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 592 agctccttctccttggcctccatggatggggagaagttgagagggttgaaga 541
to top
>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene
          Length = 1393

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 266  tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 325
            |||||||||||||||||||||||||| |  ||||||||| | ||||| || || || |||
Sbjct: 1192 tggatgatggtgttgtgccatgggtcagagaggtgctgcagaaggttgtcaaaaggtccc 1133

                                   
Query: 326  ttcccggtcacgttgtgctgcac 348
            ||||| ||||| |||||||||||
Sbjct: 1132 ttcccagtcacattgtgctgcac 1110
to top
>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein
           (cab11 gene)
          Length = 1062

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 857 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 798

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 797 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 738

                                   
Query: 383 ccgttggcgagctccttctccttg 406
           || || || |||||||||||||||
Sbjct: 737 ccattagcaagctccttctccttg 714
to top
>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein
           type 4
          Length = 819

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 138/172 (80%)
 Strand = Plus / Minus

                                                                       
Query: 272 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 331
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 743 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 684

                                                                       
Query: 332 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 391
           || || ||||| ||||| |  || |||||||| || | ||| ||||  ||||| ||||| 
Sbjct: 683 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaacctcccattggca 624

                                                               
Query: 392 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 443
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 623 agctccttctccttggcctccatggatggggagaagttgagcgggttgaaga 572
to top
>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds
          Length = 1008

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 322
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 773 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 714

                                                                       
Query: 323 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 382
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 713 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 654

                                   
Query: 383 ccgttggcgagctccttctccttg 406
           || || || |||||||||||||||
Sbjct: 653 ccattagcaagctccttctccttg 630
to top
>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 476

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 266 tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 325
           |||||||||||||||||||||||||| |  | |||||||   ||||| || || ||||| 
Sbjct: 273 tggatgatggtgttgtgccatgggtctgagatgtgctgcaagaggttgtcaaatggccct 214

                                                                       
Query: 326 ttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccg 385
           || || ||||||||||| || || |  ||||||||||| |||| ||| || | |||||||
Sbjct: 213 tttccagtcacgttgtgttgaacaataaaccccaggaatgccaacattgctaatctcccg 154

                                
Query: 386 ttggcgagctccttctccttg 406
           || || || ||||| ||||||
Sbjct: 153 ttagcaagttccttttccttg 133
to top
>gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV chlorophyll binding
           protein (LHCA4) gene, partial cds; nuclear gene for
           chloroplast product
          Length = 498

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 386 ttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 443
           |||||||||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 318 ttggcgagctccttctccttggcctccatggatggggagaagttgagagggttgaaga 261
to top
>gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV chlorophyll binding
           protein (LHCA4) gene, partial cds; nuclear gene for
           chloroplast product
          Length = 521

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 386 ttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 443
           |||||||||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 318 ttggcgagctccttctccttggcctccatggatggggagaagttgagagggttgaaga 261
to top
>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4)
           mRNA, complete cds
          Length = 1266

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 994 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 935

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 934 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 875

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 874 tctttctccttg 863
to top
>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence
          Length = 405

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 383 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 324

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 323 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 264

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 263 tctttctccttg 252
to top
>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 891

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 734 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 675

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 674 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 615

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 614 tctttctccttg 603
to top
>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 1055

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 834 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 775

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 774 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 715

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 714 tctttctccttg 703
to top
>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete
           cds
          Length = 715

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 451 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 392

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 391 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 332

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 331 tctttctccttg 320
to top
>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 508

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 297 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 238

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 237 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 178

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 177 tctttctccttg 166
to top
>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 973

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 824 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 765

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 764 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 705

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 704 tctttctccttg 693
to top
>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1046

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 808 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 749

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 748 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 689

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 688 tctttctccttg 677
to top
>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence
          Length = 1267

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 995 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 936

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 935 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 876

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 875 tctttctccttg 864
to top
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 262 ggtctggatgatggtgttgtgcca 285
           ||||||||||||||||||||||||
Sbjct: 280 ggtctggatgatggtgttgtgcca 303
to top
>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding
           protein (Cab4) mRNA, complete cds
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 275 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 334
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 804 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 745

                                                                       
Query: 335 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 394
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 744 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 685

                       
Query: 395 tccttctccttg 406
           || |||||||||
Sbjct: 684 tctttctccttg 673
to top
>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V,
             complete sequence
          Length = 114056

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 158   cctactcctccacactttgtaca 180
             |||||||||||||||||||||||
Sbjct: 37526 cctactcctccacactttgtaca 37504
to top
>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein
          Length = 726

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 272 atggtgttgtgccatgggtcgg 293
           ||||||||||||||||||||||
Sbjct: 581 atggtgttgtgccatgggtcgg 560
to top
>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence
          Length = 186333

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   ctgccacctactcctccacac 172
             |||||||||||||||||||||
Sbjct: 11776 ctgccacctactcctccacac 11756
to top
>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence
          Length = 165177

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   ctgccacctactcctccacac 172
             |||||||||||||||||||||
Sbjct: 60657 ctgccacctactcctccacac 60677
to top
>gb|AC112257.5| Mus musculus BAC clone RP23-43A18 from 16, complete sequence
          Length = 199117

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 22     atgttttgccatgttttaaaataac 46
              |||||||||| ||||||||||||||
Sbjct: 171025 atgttttgccttgttttaaaataac 171049
to top
>gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465
          Length = 3993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  caaggacaaagtttcaccacc 121
            |||||||||||||||||||||
Sbjct: 3765 caaggacaaagtttcaccacc 3785
to top
>gb|AC161815.4| Mus musculus BAC clone RP23-353C21 from chromosome 16, complete
             sequence
          Length = 197690

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 22    atgttttgccatgttttaaaataac 46
             |||||||||| ||||||||||||||
Sbjct: 17028 atgttttgccttgttttaaaataac 17052
to top
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete
             sequence
          Length = 222209

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   cagcaccccaaaataataatt 205
             |||||||||||||||||||||
Sbjct: 97909 cagcaccccaaaataataatt 97929
to top
>ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP00000012777 (LOC408740),
            mRNA
          Length = 1629

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 398  ttctccttgttctcgagggtg 418
            |||||||||||||||||||||
Sbjct: 1022 ttctccttgttctcgagggtg 1002
to top
>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence
          Length = 172400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    caaggacaaagtttcaccacc 121
              |||||||||||||||||||||
Sbjct: 170063 caaggacaaagtttcaccacc 170083
to top
>gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, complete cds, alternatively
            spliced
          Length = 9504

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 152  ctgccacctactcctccacac 172
            |||||||||||||||||||||
Sbjct: 4304 ctgccacctactcctccacac 4324
to top
>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence
          Length = 173842

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    caaggacaaagtttcaccacc 121
              |||||||||||||||||||||
Sbjct: 111543 caaggacaaagtttcaccacc 111563
to top
>dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911
          Length = 3189

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  caaggacaaagtttcaccacc 121
            |||||||||||||||||||||
Sbjct: 2950 caaggacaaagtttcaccacc 2970
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    gatggtctggatgatggtgtt 279
              |||||||||||||||||||||
Sbjct: 631602 gatggtctggatgatggtgtt 631582
to top
>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
             sequence
          Length = 229685

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   ctgccacctactcctccacac 172
             |||||||||||||||||||||
Sbjct: 31518 ctgccacctactcctccacac 31538
to top
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence
          Length = 217949

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  cagcaccccaaaataataatt 205
            |||||||||||||||||||||
Sbjct: 9849 cagcaccccaaaataataatt 9829
to top
>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 255  cggagatggtctggatgatggtgttgtg 282
            ||||||||||||||| ||||| ||||||
Sbjct: 1009 cggagatggtctggaggatggcgttgtg 982
to top
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    tggcgagctccttctccttg 406
              ||||||||||||||||||||
Sbjct: 363820 tggcgagctccttctccttg 363839
to top
>emb|CR381632.8| Zebrafish DNA sequence from clone DKEY-265M15 in linkage group 3,
             complete sequence
          Length = 171119

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tagtatgttttgccatgttt 37
             ||||||||||||||||||||
Sbjct: 14290 tagtatgttttgccatgttt 14271
to top
>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete
             sequence
          Length = 47325

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 340   gtgctgcaccaggaaccccaggaa 363
             |||| |||||||||||||||||||
Sbjct: 32871 gtgcagcaccaggaaccccaggaa 32848
to top
>ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNK01210) partial mRNA
          Length = 1432

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  tggcgagctccttctccttg 406
            ||||||||||||||||||||
Sbjct: 1096 tggcgagctccttctccttg 1077
to top
>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete
              sequence
          Length = 215829

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    catcctcagcaccccaaaat 198
              ||||||||||||||||||||
Sbjct: 132164 catcctcagcaccccaaaat 132183
to top
>ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-alpha globulin
           inhibitor H2 polypeptide (LOC478011), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 tggtctggatgatggtgttg 280
           ||||||||||||||||||||
Sbjct: 377 tggtctggatgatggtgttg 358
to top
>gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, complete sequence
          Length = 187660

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ttgccatgttttaaaataac 46
             ||||||||||||||||||||
Sbjct: 69193 ttgccatgttttaaaataac 69174
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ggtctggatgatggtgttgt 281
              ||||||||||||||||||||
Sbjct: 172999 ggtctggatgatggtgttgt 172980
to top
>gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, complete cds
          Length = 2781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 346  caccaggaaccccaggaacgccag 369
            ||||||||||||||||||| ||||
Sbjct: 1066 caccaggaaccccaggaacaccag 1089
to top
>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9,
             complete sequence
          Length = 179135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   caccccaaaataataattca 207
             ||||||||||||||||||||
Sbjct: 16903 caccccaaaataataattca 16922
to top
>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent
            isocitrate dehydrogenase a, complete cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 255  cggagatggtctggatgatggtgttgtg 282
            ||||||||||||||| ||||| ||||||
Sbjct: 1135 cggagatggtctggaggatggcgttgtg 1108
to top
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 352 gaaccccaggaacgccagcatggccagtctcccgtt 387
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 543 gaaccccacgaacgccagcatcgccagccgcccgtt 508
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tcggccaggtgctgctgcag 309
              ||||||||||||||||||||
Sbjct: 665703 tcggccaggtgctgctgcag 665722
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 255     cggagatggtctggatgatggtgttgtg 282
               ||||||||||||||| ||||| ||||||
Sbjct: 9668714 cggagatggtctggaggatggcgttgtg 9668687
to top
>gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complete sequence
          Length = 55514

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    catgggtgatattacaagta 69
             ||||||||||||||||||||
Sbjct: 11077 catgggtgatattacaagta 11096
to top
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 255    cggagatggtctggatgatggtgttgtg 282
              ||||||||||||||| ||||| ||||||
Sbjct: 106717 cggagatggtctggaggatggcgttgtg 106690
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 254     ccggagatggtctggatgatggtg 277
               ||||||||||||||||||| ||||
Sbjct: 5018847 ccggagatggtctggatgagggtg 5018824
to top
>emb|BX088583.12| Zebrafish DNA sequence from clone CH211-211K8 in linkage group 22,
             complete sequence
          Length = 202012

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    gtatgttttgccatgtttta 39
             ||||||||||||||||||||
Sbjct: 34813 gtatgttttgccatgtttta 34794
to top
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence
          Length = 211981

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    agtatgttttgccatgttttaaaa 42
             |||||| |||||||||||||||||
Sbjct: 86693 agtatggtttgccatgttttaaaa 86716
to top
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 352 gaaccccaggaacgccagcatggccagtctcccgtt 387
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 661 gaaccccacgaacgccagcatcgccagccgcccgtt 626
to top
>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full
            insert sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 255  cggagatggtctggatgatggtgttgtg 282
            ||||||||||||||| ||||| ||||||
Sbjct: 1149 cggagatggtctggaggatggcgttgtg 1122
to top
>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506
            oxidase (fkbO), and FK506 polyketide synthase (fkbB)
            genes, complete cds
          Length = 28732

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  ggtcggccaggtgctgctgcaggt 311
            ||||| ||||||||||||||||||
Sbjct: 3454 ggtcgtccaggtgctgctgcaggt 3431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,508,400
Number of Sequences: 3902068
Number of extensions: 4508400
Number of successful extensions: 90484
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90184
Number of HSP's gapped (non-prelim): 293
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top