ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_550191.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
4dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
5dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
6gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome... 44 0.42
7gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, compl... 44 0.42
8gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 40 6.6
9gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, comple... 40 6.6
10gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome... 40 6.6
11emb|AL139115.5| Human DNA sequence from clone RP11-335L15 on chr... 40 6.6
12gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 40 6.6
13gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 6.6
14emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in ... 40 6.6
15emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 40 6.6

>ref|XM_550191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1332

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 288 ggctgtcagccttcatcggactcctgctgttctcccttggtgcagggcttctgctgccag 347
           ||||||||||  |||| || ||||||||||   ||||||||||||| || |||||| || 
Sbjct: 973 ggctgtcagctctcattgggctcctgctgt---cccttggtgcaggactcctgctggcat 917

                                                                       
Query: 348 gaggggtggggctccgggccctccccttggcaggtgaagcactcctcctagggctgcggc 407
            |||||| ||||| |||  |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 916 taggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggc 857

                                                                       
Query: 408 tgtcacgggggctcctcatagggctgcgactgccacgggggctcttcatagggctgcgac 467
           | ||||| ||||| | | |||||||  |  || | || ||||||  | ||||||||||||
Sbjct: 856 tatcacgagggcttcccctagggctctgggtgtcgcgagggctccccttagggctgcgac 797

                          
Query: 468 tgtctcgggggctcc 482
           |||| ||||||||||
Sbjct: 796 tgtcacgggggctcc 782



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 396 tagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctcttca 455
           |||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   | 
Sbjct: 808 tagggctgcgactgtcacgggggctccccctagggctgcgactgtcacgggggcttcccc 749

                                       
Query: 456 tagggctgcgactgtctcgggggctcct 483
           ||||||| |||||||| || ||||||||
Sbjct: 748 tagggctccgactgtcacgagggctcct 721



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 394 cctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctctt 453
           |||||||||  || |||| || ||||||| | |||||||||||||| |||||||||||  
Sbjct: 840 cctagggctctgggtgtcgcgagggctccccttagggctgcgactgtcacgggggctccc 781

                                      
Query: 454 catagggctgcgactgtctcgggggct 480
           | |||||||||||||||| ||||||||
Sbjct: 780 cctagggctgcgactgtcacgggggct 754



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 389 ctcctcctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacggggg 448
           |||| |||||||||||| |||||||||||||| | | ||||||| |||||| |||| |||
Sbjct: 785 ctccccctagggctgcgactgtcacgggggcttcccctagggctccgactgtcacgaggg 726

              
Query: 449 ctc 451
           |||
Sbjct: 725 ctc 723



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 215  cgatggttgccattgtcttcgccgtccctggggctcgggctacgaccatttgcagctggg 274
            ||||| ||||||||||||||    ||||||||||| ||||| || ||||| |||||||  
Sbjct: 1067 cgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgta 1008

                   
Query: 275  ctcatgt 281
            |||||||
Sbjct: 1007 ctcatgt 1001



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                           
Query: 288     ggctgtcagccttcatcggactcctgctgttctcccttggtgcagggcttctgctgccag 347
               ||||||||||  |||| || ||||||||||   ||||||||||||| || |||||| || 
Sbjct: 2985688 ggctgtcagctctcattgggctcctgctgt---cccttggtgcaggactcctgctggcat 2985744

                                                                           
Query: 348     gaggggtggggctccgggccctccccttggcaggtgaagcactcctcctagggctgcggc 407
                |||||| ||||| |||  |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 2985745 taggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggc 2985804

                                                                           
Query: 408     tgtcacgggggctcctcatagggctgcgactgccacgggggctcttcatagggctgcgac 467
               | ||||| ||||| | | |||||||  |  || | || ||||||  | ||||||||||||
Sbjct: 2985805 tatcacgagggcttcccctagggctctgggtgtcgcgagggctccccttagggctgcgac 2985864

                              
Query: 468     tgtctcgggggctcc 482
               |||| ||||||||||
Sbjct: 2985865 tgtcacgggggctcc 2985879



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                           
Query: 396     tagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctcttca 455
               |||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   | 
Sbjct: 2985853 tagggctgcgactgtcacgggggctccccctagggctgcgactgtcacgggggcttcccc 2985912

                                           
Query: 456     tagggctgcgactgtctcgggggctcct 483
               ||||||| |||||||| || ||||||||
Sbjct: 2985913 tagggctccgactgtcacgagggctcct 2985940



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                           
Query: 394     cctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctctt 453
               |||||||||  || |||| || ||||||| | |||||||||||||| |||||||||||  
Sbjct: 2985821 cctagggctctgggtgtcgcgagggctccccttagggctgcgactgtcacgggggctccc 2985880

                                          
Query: 454     catagggctgcgactgtctcgggggct 480
               | |||||||||||||||| ||||||||
Sbjct: 2985881 cctagggctgcgactgtcacgggggct 2985907



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                           
Query: 389     ctcctcctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacggggg 448
               |||| |||||||||||| |||||||||||||| | | ||||||| |||||| |||| |||
Sbjct: 2985876 ctccccctagggctgcgactgtcacgggggcttcccctagggctccgactgtcacgaggg 2985935

                  
Query: 449     ctc 451
               |||
Sbjct: 2985936 ctc 2985938



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                           
Query: 215     cgatggttgccattgtcttcgccgtccctggggctcgggctacgaccatttgcagctggg 274
               ||||| ||||||||||||||    ||||||||||| ||||| || ||||| |||||||  
Sbjct: 2985594 cgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgta 2985653

                      
Query: 275     ctcatgt 281
               |||||||
Sbjct: 2985654 ctcatgt 2985660



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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 288   ggctgtcagccttcatcggactcctgctgttctcccttggtgcagggcttctgctgccag 347
             ||||||||||  |||| || ||||||||||   ||||||||||||| || |||||| || 
Sbjct: 67205 ggctgtcagctctcattgggctcctgctgt---cccttggtgcaggactcctgctggcat 67261

                                                                         
Query: 348   gaggggtggggctccgggccctccccttggcaggtgaagcactcctcctagggctgcggc 407
              |||||| ||||| |||  |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 67262 taggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggc 67321

                                                                         
Query: 408   tgtcacgggggctcctcatagggctgcgactgccacgggggctcttcatagggctgcgac 467
             | ||||| ||||| | | |||||||  |  || | || ||||||  | ||||||||||||
Sbjct: 67322 tatcacgagggcttcccctagggctctgggtgtcgcgagggctccccttagggctgcgac 67381

                            
Query: 468   tgtctcgggggctcc 482
             |||| ||||||||||
Sbjct: 67382 tgtcacgggggctcc 67396



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 396   tagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctcttca 455
             |||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   | 
Sbjct: 67370 tagggctgcgactgtcacgggggctccccctagggctgcgactgtcacgggggcttcccc 67429

                                         
Query: 456   tagggctgcgactgtctcgggggctcct 483
             ||||||| |||||||| || ||||||||
Sbjct: 67430 tagggctccgactgtcacgagggctcct 67457



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                         
Query: 394   cctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctctt 453
             |||||||||  || |||| || ||||||| | |||||||||||||| |||||||||||  
Sbjct: 67338 cctagggctctgggtgtcgcgagggctccccttagggctgcgactgtcacgggggctccc 67397

                                        
Query: 454   catagggctgcgactgtctcgggggct 480
             | |||||||||||||||| ||||||||
Sbjct: 67398 cctagggctgcgactgtcacgggggct 67424



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 389   ctcctcctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacggggg 448
             |||| |||||||||||| |||||||||||||| | | ||||||| |||||| |||| |||
Sbjct: 67393 ctccccctagggctgcgactgtcacgggggcttcccctagggctccgactgtcacgaggg 67452

                
Query: 449   ctc 451
             |||
Sbjct: 67453 ctc 67455



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 215   cgatggttgccattgtcttcgccgtccctggggctcgggctacgaccatttgcagctggg 274
             ||||| ||||||||||||||    ||||||||||| ||||| || ||||| |||||||  
Sbjct: 67111 cgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgta 67170

                    
Query: 275   ctcatgt 281
             |||||||
Sbjct: 67171 ctcatgt 67177



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>dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100L15, full
            insert sequence
          Length = 1377

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggctgtcagccttcatcggactcctgctgttctcccttggtgcagggcttctgctgccag 347
            ||||||||||  |||| || ||||||||||   ||||||||||||| || |||||| || 
Sbjct: 1018 ggctgtcagctctcattgggctcctgctgt---cccttggtgcaggactcctgctggcat 962

                                                                        
Query: 348  gaggggtggggctccgggccctccccttggcaggtgaagcactcctcctagggctgcggc 407
             |||||| ||||| |||  |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 961  taggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggc 902

                                                                        
Query: 408  tgtcacgggggctcctcatagggctgcgactgccacgggggctcttcatagggctgcgac 467
            | ||||| ||||| | | |||||||  |  || | || ||||||  | ||||||||||||
Sbjct: 901  tatcacgagggcttcccctagggctctgggtgtcgcgagggctccccttagggctgcgac 842

                           
Query: 468  tgtctcgggggctcc 482
            |||| ||||||||||
Sbjct: 841  tgtcacgggggctcc 827



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 396 tagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctcttca 455
           |||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   | 
Sbjct: 853 tagggctgcgactgtcacgggggctccccctagggctgcgactgtcacgggggcttcccc 794

                                       
Query: 456 tagggctgcgactgtctcgggggctcct 483
           ||||||| |||||||| || ||||||||
Sbjct: 793 tagggctccgactgtcacgagggctcct 766



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 394 cctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctctt 453
           |||||||||  || |||| || ||||||| | |||||||||||||| |||||||||||  
Sbjct: 885 cctagggctctgggtgtcgcgagggctccccttagggctgcgactgtcacgggggctccc 826

                                      
Query: 454 catagggctgcgactgtctcgggggct 480
           | |||||||||||||||| ||||||||
Sbjct: 825 cctagggctgcgactgtcacgggggct 799



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 389 ctcctcctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacggggg 448
           |||| |||||||||||| |||||||||||||| | | ||||||| |||||| |||| |||
Sbjct: 830 ctccccctagggctgcgactgtcacgggggcttcccctagggctccgactgtcacgaggg 771

              
Query: 449 ctc 451
           |||
Sbjct: 770 ctc 768



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 215  cgatggttgccattgtcttcgccgtccctggggctcgggctacgaccatttgcagctggg 274
            ||||| ||||||||||||||    ||||||||||| ||||| || ||||| |||||||  
Sbjct: 1112 cgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgta 1053

                   
Query: 275  ctcatgt 281
            |||||||
Sbjct: 1052 ctcatgt 1046



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>dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F07, full
           insert sequence
          Length = 1332

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 159/195 (81%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 288 ggctgtcagccttcatcggactcctgctgttctcccttggtgcagggcttctgctgccag 347
           ||||||||||  |||| || ||||||||||   ||||||||||||| || |||||| || 
Sbjct: 973 ggctgtcagctctcattgggctcctgctgt---cccttggtgcaggactcctgctggcat 917

                                                                       
Query: 348 gaggggtggggctccgggccctccccttggcaggtgaagcactcctcctagggctgcggc 407
            |||||| ||||| |||  |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 916 taggggtagggctgcggttcctcccgttgggtggtgaagcacttctcctagggctgcggc 857

                                                                       
Query: 408 tgtcacgggggctcctcatagggctgcgactgccacgggggctcttcatagggctgcgac 467
           | ||||| ||||| | | |||||||  |  || | || ||||||  | ||||||||||||
Sbjct: 856 tatcacgagggcttcccctagggctctgggtgtcgcgagggctccccttagggctgcgac 797

                          
Query: 468 tgtctcgggggctcc 482
           |||| ||||||||||
Sbjct: 796 tgtcacgggggctcc 782



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 396 tagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctcttca 455
           |||||||||| |||||||||||||||| | |||||||||||||| ||||||||||   | 
Sbjct: 808 tagggctgcgactgtcacgggggctccccctagggctgcgactgtcacgggggcttcccc 749

                                       
Query: 456 tagggctgcgactgtctcgggggctcct 483
           ||||||| |||||||| || ||||||||
Sbjct: 748 tagggctccgactgtcacgagggctcct 721



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 394 cctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacgggggctctt 453
           |||||||||  || |||| || ||||||| | |||||||||||||| |||||||||||  
Sbjct: 840 cctagggctctgggtgtcgcgagggctccccttagggctgcgactgtcacgggggctccc 781

                                      
Query: 454 catagggctgcgactgtctcgggggct 480
           | |||||||||||||||| ||||||||
Sbjct: 780 cctagggctgcgactgtcacgggggct 754



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 389 ctcctcctagggctgcggctgtcacgggggctcctcatagggctgcgactgccacggggg 448
           |||| |||||||||||| |||||||||||||| | | ||||||| |||||| |||| |||
Sbjct: 785 ctccccctagggctgcgactgtcacgggggcttcccctagggctccgactgtcacgaggg 726

              
Query: 449 ctc 451
           |||
Sbjct: 725 ctc 723



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 215  cgatggttgccattgtcttcgccgtccctggggctcgggctacgaccatttgcagctggg 274
            ||||| ||||||||||||||    ||||||||||| ||||| || ||||| |||||||  
Sbjct: 1067 cgatgattgccattgtcttcataatccctggggcttgggctccggccattggcagctgta 1008

                   
Query: 275  ctcatgt 281
            |||||||
Sbjct: 1007 ctcatgt 1001



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>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete sequence
          Length = 233740

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 328    tgcagggcttctgctgccagga 349
              ||||||||||||||||||||||
Sbjct: 143566 tgcagggcttctgctgccagga 143545



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>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence
          Length = 215251

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 328    tgcagggcttctgctgccagga 349
              ||||||||||||||||||||||
Sbjct: 150987 tgcagggcttctgctgccagga 151008



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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gtaggaagaatttgatcgac 117
             ||||||||||||||||||||
Sbjct: 83348 gtaggaagaatttgatcgac 83367



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>gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, complete sequence
          Length = 171788

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   actctcaccaggtgatgcac 142
             ||||||||||||||||||||
Sbjct: 90667 actctcaccaggtgatgcac 90686



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>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence
          Length = 184772

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   actcccactgggtgaacact 160
             ||||||||||||||||||||
Sbjct: 99002 actcccactgggtgaacact 99021



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>emb|AL139115.5| Human DNA sequence from clone RP11-335L15 on chromosome 9 Contains the 3'
              end of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2,
              SH3P4, EEN-B1, SH3D2A), complete sequence
          Length = 148082

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     aagtctttgctcaagatttt 81
              ||||||||||||||||||||
Sbjct: 109362 aagtctttgctcaagatttt 109381



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>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    gtgcagggcttctgctgcca 346
              ||||||||||||||||||||
Sbjct: 408265 gtgcagggcttctgctgcca 408284



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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    actggaagaatttgatccacttaa 181
              |||||||||||||||||| |||||
Sbjct: 759706 actggaagaatttgatccgcttaa 759683



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>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7,
             complete sequence
          Length = 237129

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    tgctcaagattttggagagttttg 92
             ||||||||| ||||||||||||||
Sbjct: 82227 tgctcaagaatttggagagttttg 82250



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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
             complete sequence
          Length = 209666

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    tgctcaagattttggagagttttg 92
             ||||||||| ||||||||||||||
Sbjct: 26589 tgctcaagaatttggagagttttg 26612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,706,421
Number of Sequences: 3902068
Number of extensions: 3706421
Number of successful extensions: 65789
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65696
Number of HSP's gapped (non-prelim): 83
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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