>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = -1

Query: 503 DVRKLVDQRLGCRYDVXXXXXXXXXXXACVGDNPAIRPSMADVVRTLEQI 354
           D+R +VDQRL  RYDV           AC     A RP+M+ VV  L+QI
Sbjct: 796 DIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845

>COL19_CAEEL (P18835) Cuticle collagen 19 precursor|
          Length = 289

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIGRRNEAVSR 307
           G  G AGG  RRG PG     G +GP    D GR    GR   A  R
Sbjct: 159 GSAGPAGGNGRRGPPGPVGGPGEQGPQ--GDAGRPGAAGRPGPAGPR 203

>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG----PDLGADLGRRETIG 331
           G  G AG    RG PG+P V G RG    P L  + G R   G
Sbjct: 535 GRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTG 577

>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)|
          Length = 302

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGP--DLGADLGRRETIGRRNEAVSRACGPTRKIEP 277
           GD G+ G   + GQPG+ A  G +GP    GA           +E +   C P +K EP
Sbjct: 163 GDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEP 221

>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG----PDLGADLGRRETIG 331
           G  G AG    RG PG P + G RG    P L  + G+R   G
Sbjct: 535 GRRGRAGADGARGMPGEPGMKGDRGFDGLPGLPGEKGQRGDTG 577

>ATPD_TOBAC (P32980) ATP synthase delta chain, chloroplast precursor (EC|
           3.6.3.14)
          Length = 248

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 155 RNQPFLFAFSSPTQLLCFAGGCRIRSI---LRSQRSPRRVGASIGS 283
           R+ P     S PT  L F+GG ++  +   LRS R+ RR G + GS
Sbjct: 14  RSPPPTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGS 59

>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)|
          Length = 437

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 419 CVGDNPAIRPSMADVVRTLEQISAAGR 339
           C  +NP  RP+M+DV + L++++  GR
Sbjct: 358 CCAENPNDRPTMSDVAQILQRVTGQGR 384

>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)|
          Length = 1758

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = -3

Query: 450 GGDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIGRRNEA 316
           GG  G  G G   GQPG P + G +G  L    G R   GR   A
Sbjct: 270 GGQRGYPGNGGLSGQPGLPGMKGEKG--LSGPAGPRGKEGRPGNA 312



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG-PDLGADLGRRETIGRRNE 319
           GD G  G G +RG PGN  + G+ G P +  + G     G R +
Sbjct: 262 GDKGEPGEGGQRGYPGNGGLSGQPGLPGMKGEKGLSGPAGPRGK 305

>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC|
           2.7.11.1)
          Length = 423

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 494 KLVDQRLGCRYDVXXXXXXXXXXXACVGDNPAIRPSMADVVRTLEQISAA 345
           K+VD  L  +Y V            CV + P +RP ++DVV  L  ++++
Sbjct: 334 KMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASS 383

>SSB_RALSO (Q8Y2B4) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 178

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = -3

Query: 450 GGDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIGRRNEAVSRACGPTRKIEPID 271
           GG+ G  GGG  RG+      +G      G  + R E  G +     R   P+   E +D
Sbjct: 114 GGEGGGGGGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGARRQQAPSNGFEDMD 173

>FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein|
          Length = 378

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 412 GTTRQSGRPWPTWSGPWSRSRPPGDDR-TAQRSREPRVRANEEDR 281
           G   +S   +P W  P   +R PG D+      REP V   E+DR
Sbjct: 137 GRLHRSPLAFPAWVRPPETARTPGSDKERPMERREPSVTKEEKDR 181

>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor|
          Length = 3063

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRGPD-LGADLGRRETIGRRN--EAVSR 307
            G  G+ G     G+PG P  HGR GP  L  + G R  I  +N   AV+R
Sbjct: 2860 GSPGSPGVTGPSGKPGKPGDHGRPGPSGLKGEKGDRGDIASQNMMRAVAR 2909

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRGPD 367
            G+ G  GGG   GQPG P   G+ G D
Sbjct: 1146 GEPGPVGGGGHPGQPGPPGEKGKPGQD 1172

>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRG-PDLGADLGRRETIG 331
            GD G+AG    RG PG+P   G  G P +    G R + G
Sbjct: 882  GDRGDAGMSGERGHPGSPGFKGMAGMPGIPGQKGDRGSPG 921



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 414 RGQPGNPAVHGRRGPD 367
           RGQPG P VHG +G D
Sbjct: 554 RGQPGIPGVHGMKGDD 569

>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein|
          Length = 372

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 412 GTTRQSGRPWPTWSGPWSRSRPPGDDRTAQ-RSREPRVRANEEDR 281
           G   +S   +P W  P   +R PG D+      REP +   E+DR
Sbjct: 137 GRLHRSPLTFPAWVRPPEAARTPGSDKERPVERREPSITKEEKDR 181

>ODO1_COXBU (P51056) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 934

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 219 HPPAKQSNWVGEEKANKNGWFRQRLALSKIIR 124
           +P AKQ  W  EE  N+  WF  R  L K +R
Sbjct: 865 YPNAKQVIWCQEEPKNQGAWFCTRHRLIKCMR 896

>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRGPD--LGADLGRRETIGRRNEAVSRACGPTRKIEPI 274
            GD G  G     G+ G P   G+RGP    GA+ GR+   G + EA   A GP  K  P+
Sbjct: 1339 GDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAE-GRQGEKGAKGEA--GAEGPPGKTGPV 1395



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG----PDLGADLGRR 343
           G  G  G    RG PG P   G RG    P L  D G R
Sbjct: 577 GKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR 615

>MAGD4_HUMAN (Q96JG8) Melanoma-associated antigen D4 (MAGE-D4 antigen) (MAGE-E1|
           antigen)
          Length = 741

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = -2

Query: 418 ASGTTRQSGRPWPTWSGPWSRSRPPGDDRTAQRSREPRVRANEEDRADRCADPTWRAL*P 239
           A+ T + S  PW    G  ++     DD            ++EE+R      PTWRA  P
Sbjct: 327 AAATAQHSAEPWARMGGKRTKKSKHLDDE---------YESSEEERETPAVPPTWRASQP 377

>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)|
            (180 kDa bullous pemphigoid antigen 2)
          Length = 1431

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIGRRNEAVS 310
            GD G AG   +RG PG P   G++G D G D G +   GRR  +++
Sbjct: 1388 GDRGLAG---QRGPPGPPGPRGQKG-DKG-DKGDQVYTGRRRRSIA 1428

>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor|
          Length = 1690

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -3

Query: 411 GQPGNPAVHGRRGPDLGADLGRRETIGRRNEAVSRACGPTRKIEPID 271
           GQPG P + G  G  +   +G    +G++        GPT  +EP D
Sbjct: 223 GQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSP-----GPTLLVEPPD 264

>TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53-binding protein|
            1) (p53BP1) (53BP1)
          Length = 1957

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 444  DHGNAGGGVRRG--QPGNPAVHGRRGPDLGADLGRRETI 334
            + G+AG G+R+G   P  P   GRRG       G RET+
Sbjct: 1362 EDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETV 1400

>AP4B1_MOUSE (Q9WV76) AP-4 complex subunit beta-1 (Adapter-related protein|
           complex 4 beta-1 subunit) (Beta subunit of AP-4) (AP-4
           adapter complex beta subunit)
          Length = 739

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 164 PFLFAFSSPTQLLCFAGGCRIRSILRS 244
           P L A SS ++ LCFA  C +R +L S
Sbjct: 280 PLLAACSSESRELCFAALCHVRQVLHS 306

>OTO1_ONCKE (P83371) Otolin-1 precursor|
          Length = 508

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGP--DLGADLGRRET 337
           GD G+ G     G PG P + G+ GP  DLG    + ET
Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGET 227

>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 491

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/51 (35%), Positives = 20/51 (39%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIGRRNEAVSRACGP 295
           GD G AGG  RR     P+ HG  GP    +  R    G    A   A  P
Sbjct: 2   GDRGGAGGTRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDMGAAGDAPAP 52

>PGL1_CAEEL (Q9TZQ3) P granule abnormality protein 1|
          Length = 730

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -3

Query: 450 GGDHGNAGGGVRRGQPGNPAVHGRRGPDLGADLGRRETIG 331
           GG  G  GGG R G+ G     G RG   G D G R   G
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYG 713

>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 458

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGP 370
           G+ G+ G   R+G+PG P V G  GP
Sbjct: 119 GEKGDLGRPGRKGRPGPPGVPGEPGP 144

>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG 373
           G  GN G   +RG PG P V G+RG
Sbjct: 904 GPPGNPGTPGQRGSPGIPGVKGQRG 928

>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGP----DLGADLGRRETIG----RRNEAVSRACGPT 292
           G  G+AG    +G+PG+P  +G  G      L  + GR    G    R N+  + A GP 
Sbjct: 275 GAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPP 334

Query: 291 RKIEPIDAP 265
               P   P
Sbjct: 335 GPTGPAGPP 343

>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRGPD 367
            G+ G  GGG R G PG P   G  G D
Sbjct: 1146 GEPGPVGGGGRPGPPGPPGEKGNPGQD 1172

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -3

Query: 447  GDHGNAGGGVRRGQPGNPAVHGRRG-PDLGADLGRRETIGRRNEAVSRACGPTRKIEPI 274
            GD G  G     G+ G P   G+RG P      GR+   G + EA   A GP  K  P+
Sbjct: 1337 GDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEA--GAEGPPGKTGPV 1393

>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRGP----DLGADLGRRETIG----RRNEAVSRACGPT 292
           G  G+AG    +G+PG+P  +G  G      L  + GR    G    R N+  + A GP 
Sbjct: 271 GAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPP 330

Query: 291 RKIEPIDAP 265
               P   P
Sbjct: 331 GPTGPAGPP 339

>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/47 (23%), Positives = 25/47 (53%)
 Frame = -1

Query: 494 KLVDQRLGCRYDVXXXXXXXXXXXACVGDNPAIRPSMADVVRTLEQI 354
           +++D RL  +Y +            C+  +   RP+M ++V+T+E++
Sbjct: 307 RVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353

>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
 Frame = +2

Query: 392 AGLPGCPRRTPPPALPW-----SPPGRH----RTGTLAS 481
           AGLPG P R  PP  P       PPGR     RTG   S
Sbjct: 699 AGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGS 737

>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
 Frame = -3

Query: 447 GDHGNAGGGVRRGQPGNPAVHGRRG----PDLGADLGRR 343
           G  G  G    RG PG P   G RG    P L  D G R
Sbjct: 344 GKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHR 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,212,835
Number of Sequences: 219361
Number of extensions: 1337477
Number of successful extensions: 7537
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7431
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)