ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466202.1| Oryza sativa (japonica cultivar-group), mRNA 246 7e-62
2dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6emb|AL355585.15| Human DNA sequence from clone RP11-535I8 on chr... 46 0.12
7gb|AC138908.3| Homo sapiens chromosome 5 clone RP11-615D2, compl... 42 1.9
8gb|AC008851.7| Homo sapiens chromosome 5 clone CTD-2173D20, comp... 42 1.9
9gb|AC182740.1| Gasterosteus aculeatus clone VMRC26-91C14, comple... 42 1.9
10gb|AC138850.2| Homo sapiens chromosome 5 clone RP11-1308P14, com... 42 1.9
11gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome... 42 1.9
12gb|AC138832.2| Homo sapiens chromosome 5 clone RP11-1174L13, com... 42 1.9
13gb|AC108106.4| Homo sapiens chromosome 5 clone RP11-214M1, compl... 42 1.9
14gb|AC138948.2| Homo sapiens chromosome 5 clone RP11-800G17, comp... 42 1.9
15gb|AC138817.2| Homo sapiens chromosome 5 clone RP11-1099E10, com... 42 1.9
16emb|AJ279131.1|HSA279131 Homo sapiens partial TFNR gene for tran... 42 1.9
17dbj|AB033067.1| Homo sapiens mRNA for KIAA1241 protein, partial cds 42 1.9
18emb|AL714026.13| Mouse DNA sequence from clone RP23-322I11 on ch... 42 1.9
19gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's H... 40 7.6
20gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome... 40 7.6
21gb|AC093516.5| Homo sapiens chromosome 16 clone CTD-2537L13, com... 40 7.6
22gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosom... 40 7.6
23ref|XM_758977.1| Theileria parva strain Muguga chromosome 4 hypo... 40 7.6
24gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, com... 40 7.6
25emb|AL033538.1|HS477H23 Human DNA sequence from clone RP3-477H23... 40 7.6
26gb|AC159907.3| Pan troglodytes BAC clone CH251-286G18 from chrom... 40 7.6
27gb|AC026712.7| Homo sapiens chromosome 5 clone CTD-2121K20, comp... 40 7.6
28gb|AC022132.6| Homo sapiens chromosome 5 clone CTD-2201J22, comp... 40 7.6
29gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, comp... 40 7.6
30dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 7.6
31gb|AY065986.1| Mycoplasma gallisepticum strain S6PFM macrophage-... 40 7.6
32gb|AC008768.8| Homo sapiens chromosome 5 clone CTD-2005G16, comp... 40 7.6
33gb|AC011413.3| Homo sapiens chromosome 5 clone CTB-82M23, comple... 40 7.6
34gb|AC160022.2| Pan troglodytes BAC clone CH251-424F19 from chrom... 40 7.6
35gb|AC011347.6| Homo sapiens chromosome 5 clone CTC-295J22, compl... 40 7.6
36gb|AY065985.1| Mycoplasma gallisepticum strain ts-11 DNA repair ... 40 7.6
37gb|AF241359.1|AF241359 Enterovirus CA55-1988, complete genome 40 7.6
38emb|BX640542.3| Human DNA sequence from clone RP13-109G9 on chro... 40 7.6
39emb|CR925835.5| Zebrafish DNA sequence from clone DKEY-86E23 in ... 40 7.6
40emb|CR847568.13| Zebrafish DNA sequence from clone DKEYP-74C2 in... 40 7.6
41gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 40 7.6
42dbj|AP001994.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.6
43gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosom... 40 7.6
44emb|AL008724.1|HSB107C2 Human DNA sequence from clone SC22CB-107... 40 7.6
45gb|AC093290.4| Homo sapiens chromosome 5 clone RP11-47L17, compl... 40 7.6
46gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, comple... 40 7.6 
>ref|XM_466202.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1722

 Score =  246 bits (124), Expect = 7e-62
 Identities = 232/268 (86%)
 Strand = Plus / Minus

                                                                        
Query: 293  aagtcatcgtcaacatcatatgcggggttgcataagcacctaaatagcctgccaattccc 352
            ||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||
Sbjct: 1412 aagtcatcgtcaacatcatatgctgggttgcataagcatctgaataacctgccaattccc 1353

                                                                        
Query: 353  tgagtaagcgcaggagtccgatatgtcactgcccgtgatgcctcctcgtctgaactttca 412
            |||||||  |||||||||||||| | ||||| ||| |   | || || ||||||||||||
Sbjct: 1352 tgagtaactgcaggagtccgataaggcactgtccgagccacgtcgtcatctgaactttca 1293

                                                                        
Query: 413  tctgagctgctgtcatcatcgagaacggttggctttgatggccctggtaatgcctccttt 472
            || |||||||||||||||||||||| ||| || |||||||| ||||| ||||||||||| 
Sbjct: 1292 tcagagctgctgtcatcatcgagaatggtcggttttgatggtcctggcaatgcctccttg 1233

                                                                        
Query: 473  tctctctgaaatatttttccgagatttctcaaggccattgcacgggctttaagatcctct 532
            || ||||| ||||| || || ||| || |||  ||||||||||| || || |||||||||
Sbjct: 1232 tccctctggaatatcttcccaagaattttcagtgccattgcacgagccttgagatcctct 1173

                                        
Query: 533  ttcttgacattattttcatgcaacacca 560
            ||||||||||| ||||||||||||||||
Sbjct: 1172 ttcttgacattgttttcatgcaacacca 1145
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>dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A01, full
            insert sequence
          Length = 1722

 Score =  246 bits (124), Expect = 7e-62
 Identities = 232/268 (86%)
 Strand = Plus / Minus

                                                                        
Query: 293  aagtcatcgtcaacatcatatgcggggttgcataagcacctaaatagcctgccaattccc 352
            ||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||
Sbjct: 1412 aagtcatcgtcaacatcatatgctgggttgcataagcatctgaataacctgccaattccc 1353

                                                                        
Query: 353  tgagtaagcgcaggagtccgatatgtcactgcccgtgatgcctcctcgtctgaactttca 412
            |||||||  |||||||||||||| | ||||| ||| |   | || || ||||||||||||
Sbjct: 1352 tgagtaactgcaggagtccgataaggcactgtccgagccacgtcgtcatctgaactttca 1293

                                                                        
Query: 413  tctgagctgctgtcatcatcgagaacggttggctttgatggccctggtaatgcctccttt 472
            || |||||||||||||||||||||| ||| || |||||||| ||||| ||||||||||| 
Sbjct: 1292 tcagagctgctgtcatcatcgagaatggtcggttttgatggtcctggcaatgcctccttg 1233

                                                                        
Query: 473  tctctctgaaatatttttccgagatttctcaaggccattgcacgggctttaagatcctct 532
            || ||||| ||||| || || ||| || |||  ||||||||||| || || |||||||||
Sbjct: 1232 tccctctggaatatcttcccaagaattttcagtgccattgcacgagccttgagatcctct 1173

                                        
Query: 533  ttcttgacattattttcatgcaacacca 560
            ||||||||||| ||||||||||||||||
Sbjct: 1172 ttcttgacattgttttcatgcaacacca 1145
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 2e-18
 Identities = 114/135 (84%)
 Strand = Plus / Plus

                                                                            
Query: 346      aattccctgagtaagcgcaggagtccgatatgtcactgcccgtgatgcctcctcgtctga 405
                |||| |||||||||  |||||||||||||| | ||||| ||| |   | || || |||||
Sbjct: 21014255 aattgcctgagtaactgcaggagtccgataaggcactgtccgagccacgtcgtcatctga 21014314

                                                                            
Query: 406      actttcatctgagctgctgtcatcatcgagaacggttggctttgatggccctggtaatgc 465
                ||||||||| |||||||||||||||||||||| ||| || |||||||| ||||| |||||
Sbjct: 21014315 actttcatcagagctgctgtcatcatcgagaatggtcggttttgatggtcctggcaatgc 21014374

                               
Query: 466      ctccttttctctctg 480
                |||||| || |||||
Sbjct: 21014375 ctccttgtccctctg 21014389



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                            
Query: 293      aagtcatcgtcaacatcatatgcggggttgcataagcacctaaatagcctgccaattccc 352
                ||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||
Sbjct: 21014109 aagtcatcgtcaacatcatatgctgggttgcataagcatctgaataacctgccaattccc 21014168

                   
Query: 353      tga 355
                |||
Sbjct: 21014169 tga 21014171



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 506      gccattgcacgggctttaagatcctctttcttgacattattttcatgcaacacc 559
                ||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 21014520 gccattgcacgagccttgagatcctctttcttgacattgttttcatgcaacacc 21014573
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470G10
          Length = 145419

 Score =  101 bits (51), Expect = 2e-18
 Identities = 114/135 (84%)
 Strand = Plus / Plus

                                                                          
Query: 346    aattccctgagtaagcgcaggagtccgatatgtcactgcccgtgatgcctcctcgtctga 405
              |||| |||||||||  |||||||||||||| | ||||| ||| |   | || || |||||
Sbjct: 137727 aattgcctgagtaactgcaggagtccgataaggcactgtccgagccacgtcgtcatctga 137786

                                                                          
Query: 406    actttcatctgagctgctgtcatcatcgagaacggttggctttgatggccctggtaatgc 465
              ||||||||| |||||||||||||||||||||| ||| || |||||||| ||||| |||||
Sbjct: 137787 actttcatcagagctgctgtcatcatcgagaatggtcggttttgatggtcctggcaatgc 137846

                             
Query: 466    ctccttttctctctg 480
              |||||| || |||||
Sbjct: 137847 ctccttgtccctctg 137861



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                          
Query: 293    aagtcatcgtcaacatcatatgcggggttgcataagcacctaaatagcctgccaattccc 352
              ||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||
Sbjct: 137581 aagtcatcgtcaacatcatatgctgggttgcataagcatctgaataacctgccaattccc 137640

                 
Query: 353    tga 355
              |||
Sbjct: 137641 tga 137643



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                    
Query: 506    gccattgcacgggctttaagatcctctttcttgacattattttcatgcaacacc 559
              ||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 137992 gccattgcacgagccttgagatcctctttcttgacattgttttcatgcaacacc 138045
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  101 bits (51), Expect = 2e-18
 Identities = 114/135 (84%)
 Strand = Plus / Plus

                                                                         
Query: 346   aattccctgagtaagcgcaggagtccgatatgtcactgcccgtgatgcctcctcgtctga 405
             |||| |||||||||  |||||||||||||| | ||||| ||| |   | || || |||||
Sbjct: 16000 aattgcctgagtaactgcaggagtccgataaggcactgtccgagccacgtcgtcatctga 16059

                                                                         
Query: 406   actttcatctgagctgctgtcatcatcgagaacggttggctttgatggccctggtaatgc 465
             ||||||||| |||||||||||||||||||||| ||| || |||||||| ||||| |||||
Sbjct: 16060 actttcatcagagctgctgtcatcatcgagaatggtcggttttgatggtcctggcaatgc 16119

                            
Query: 466   ctccttttctctctg 480
             |||||| || |||||
Sbjct: 16120 ctccttgtccctctg 16134



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                         
Query: 293   aagtcatcgtcaacatcatatgcggggttgcataagcacctaaatagcctgccaattccc 352
             ||||||||||||||||||||||| |||||||||||||| || |||| |||||||||||||
Sbjct: 15854 aagtcatcgtcaacatcatatgctgggttgcataagcatctgaataacctgccaattccc 15913

                
Query: 353   tga 355
             |||
Sbjct: 15914 tga 15916



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 506   gccattgcacgggctttaagatcctctttcttgacattattttcatgcaacacc 559
             ||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 16265 gccattgcacgagccttgagatcctctttcttgacattgttttcatgcaacacc 16318
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>emb|AL355585.15| Human DNA sequence from clone RP11-535I8 on chromosome 9 Contains a
             meningioma expressed antigen 6 (coiled-coil proline-rich)
             (MGEA6) pseudogene, complete sequence
          Length = 76321

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 528   cctctttcttgacattattttca 550
             |||||||||||||||||||||||
Sbjct: 59457 cctctttcttgacattattttca 59435
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>gb|AC138908.3| Homo sapiens chromosome 5 clone RP11-615D2, complete sequence
          Length = 201419

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 469    cttttctctctgaaatatttt 489
              |||||||||||||||||||||
Sbjct: 100792 cttttctctctgaaatatttt 100772
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>gb|AC008851.7| Homo sapiens chromosome 5 clone CTD-2173D20, complete sequence
          Length = 130416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   cttttctctctgaaatatttt 489
             |||||||||||||||||||||
Sbjct: 81452 cttttctctctgaaatatttt 81432
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>gb|AC182740.1| Gasterosteus aculeatus clone VMRC26-91C14, complete sequence
          Length = 160244

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     caatcaaacatggtctatttc 68
              |||||||||||||||||||||
Sbjct: 110110 caatcaaacatggtctatttc 110090
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>gb|AC138850.2| Homo sapiens chromosome 5 clone RP11-1308P14, complete sequence
          Length = 188885

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 469  cttttctctctgaaatatttt 489
            |||||||||||||||||||||
Sbjct: 5709 cttttctctctgaaatatttt 5689
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>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence
          Length = 149132

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 532    tttcttgacattattttcatg 552
              |||||||||||||||||||||
Sbjct: 141276 tttcttgacattattttcatg 141256
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>gb|AC138832.2| Homo sapiens chromosome 5 clone RP11-1174L13, complete sequence
          Length = 225384

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 469    cttttctctctgaaatatttt 489
              |||||||||||||||||||||
Sbjct: 106159 cttttctctctgaaatatttt 106179
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>gb|AC108106.4| Homo sapiens chromosome 5 clone RP11-214M1, complete sequence
          Length = 160701

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 469    cttttctctctgaaatatttt 489
              |||||||||||||||||||||
Sbjct: 155837 cttttctctctgaaatatttt 155857
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>gb|AC138948.2| Homo sapiens chromosome 5 clone RP11-800G17, complete sequence
          Length = 172404

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   cttttctctctgaaatatttt 489
             |||||||||||||||||||||
Sbjct: 93573 cttttctctctgaaatatttt 93553
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>gb|AC138817.2| Homo sapiens chromosome 5 clone RP11-1099E10, complete sequence
          Length = 185785

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   cttttctctctgaaatatttt 489
             |||||||||||||||||||||
Sbjct: 76120 cttttctctctgaaatatttt 76100
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>emb|AJ279131.1|HSA279131 Homo sapiens partial TFNR gene for transcription factor-like
           nuclear regulator, exon 12
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 469 cttttctctctgaaatatttt 489
           |||||||||||||||||||||
Sbjct: 548 cttttctctctgaaatatttt 568
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>dbj|AB033067.1| Homo sapiens mRNA for KIAA1241 protein, partial cds
          Length = 5755

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 469 cttttctctctgaaatatttt 489
           |||||||||||||||||||||
Sbjct: 792 cttttctctctgaaatatttt 812
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>emb|AL714026.13| Mouse DNA sequence from clone RP23-322I11 on chromosome 2, complete
              sequence
          Length = 134955

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 440    gttggctttgatggccctggt 460
              |||||||||||||||||||||
Sbjct: 105694 gttggctttgatggccctggt 105674
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>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216036

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    atggccctggtaatgcctcc 469
              ||||||||||||||||||||
Sbjct: 159888 atggccctggtaatgcctcc 159869
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>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence
          Length = 165198

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   atggccctggtaatgcctcc 469
             ||||||||||||||||||||
Sbjct: 64313 atggccctggtaatgcctcc 64332
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>gb|AC093516.5| Homo sapiens chromosome 16 clone CTD-2537L13, complete sequence
          Length = 186814

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   atggccctggtaatgcctcc 469
             ||||||||||||||||||||
Sbjct: 92680 atggccctggtaatgcctcc 92661
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>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence
          Length = 184128

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    ttctctctgaaatatttttc 491
              ||||||||||||||||||||
Sbjct: 103629 ttctctctgaaatatttttc 103610
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>ref|XM_758977.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0435) partial mRNA
          Length = 5415

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  cacctaaatagcctgccaat 348
            ||||||||||||||||||||
Sbjct: 2254 cacctaaatagcctgccaat 2273
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>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence
          Length = 218079

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    ttctctctgaaatatttttc 491
              ||||||||||||||||||||
Sbjct: 202836 ttctctctgaaatatttttc 202817
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>emb|AL033538.1|HS477H23 Human DNA sequence from clone RP3-477H23 on chromosome 22q12.1-12.2,
             complete sequence
          Length = 114600

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   atatgtcactgcccgtgatg 392
             ||||||||||||||||||||
Sbjct: 56358 atatgtcactgcccgtgatg 56377
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>gb|AC159907.3| Pan troglodytes BAC clone CH251-286G18 from chromosome unknown,
             complete sequence
          Length = 156488

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   atggccctggtaatgcctcc 469
             ||||||||||||||||||||
Sbjct: 25032 atggccctggtaatgcctcc 25051
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>gb|AC026712.7| Homo sapiens chromosome 5 clone CTD-2121K20, complete sequence
          Length = 112085

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   ttgacattattttcatgcaa 555
             ||||||||||||||||||||
Sbjct: 37253 ttgacattattttcatgcaa 37234
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>gb|AC022132.6| Homo sapiens chromosome 5 clone CTD-2201J22, complete sequence
          Length = 112085

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   ttgacattattttcatgcaa 555
             ||||||||||||||||||||
Sbjct: 37253 ttgacattattttcatgcaa 37234
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>gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, complete sequence
          Length = 203204

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    taatgcctccttttctctct 479
              ||||||||||||||||||||
Sbjct: 179773 taatgcctccttttctctct 179792
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tatggtcatgcgagtgaaaa 94
              ||||||||||||||||||||
Sbjct: 651456 tatggtcatgcgagtgaaaa 651475
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>gb|AY065986.1| Mycoplasma gallisepticum strain S6PFM macrophage-activating
            lipoprotein-like protein (p47) gene, complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  atctaaagctttaactgttg 121
            ||||||||||||||||||||
Sbjct: 1070 atctaaagctttaactgttg 1051
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>gb|AC008768.8| Homo sapiens chromosome 5 clone CTD-2005G16, complete sequence
          Length = 139111

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   ttgacattattttcatgcaa 555
             ||||||||||||||||||||
Sbjct: 80007 ttgacattattttcatgcaa 79988
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>gb|AC011413.3| Homo sapiens chromosome 5 clone CTB-82M23, complete sequence
          Length = 136365

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   tctttcttgacattattttc 549
             ||||||||||||||||||||
Sbjct: 26403 tctttcttgacattattttc 26384
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>gb|AC160022.2| Pan troglodytes BAC clone CH251-424F19 from chromosome unknown,
             complete sequence
          Length = 197895

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   atggccctggtaatgcctcc 469
             ||||||||||||||||||||
Sbjct: 74679 atggccctggtaatgcctcc 74698
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>gb|AC011347.6| Homo sapiens chromosome 5 clone CTC-295J22, complete sequence
          Length = 163167

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 530    tctttcttgacattattttc 549
              ||||||||||||||||||||
Sbjct: 127272 tctttcttgacattattttc 127253
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>gb|AY065985.1| Mycoplasma gallisepticum strain ts-11 DNA repair and recombination
            protein (recR) gene, partial cds; macrophage-activating
            lipoprotein-like protein (p47) gene, complete cds; and
            hemagglutinin (vlhA) gene, partial cds
          Length = 3894

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  atctaaagctttaactgttg 121
            ||||||||||||||||||||
Sbjct: 1426 atctaaagctttaactgttg 1407
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>gb|AF241359.1|AF241359 Enterovirus CA55-1988, complete genome
          Length = 7411

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  acgtatatccatacccttca 180
            ||||||||||||||||||||
Sbjct: 2967 acgtatatccatacccttca 2986
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>emb|BX640542.3| Human DNA sequence from clone RP13-109G9 on chromosome 1, complete
              sequence
          Length = 157207

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 530    tctttcttgacattattttc 549
              ||||||||||||||||||||
Sbjct: 133626 tctttcttgacattattttc 133607
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>emb|CR925835.5| Zebrafish DNA sequence from clone DKEY-86E23 in linkage group 24,
            complete sequence
          Length = 59354

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 409  ttcatctgagctgctgtcatcatc 432
            ||||||||||||||| ||||||||
Sbjct: 3469 ttcatctgagctgctatcatcatc 3492
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>emb|CR847568.13| Zebrafish DNA sequence from clone DKEYP-74C2 in linkage group 3,
             complete sequence
          Length = 173689

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tgcatgactccagctgttca 219
             ||||||||||||||||||||
Sbjct: 76421 tgcatgactccagctgttca 76402
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    atctaaagctttaactgttg 121
              ||||||||||||||||||||
Sbjct: 827226 atctaaagctttaactgttg 827245
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>dbj|AP001994.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215D10, complete
              sequence
          Length = 167376

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    tgcctccttttctctctgaa 482
              ||||||||||||||||||||
Sbjct: 104047 tgcctccttttctctctgaa 104066
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>gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosome 17, complete sequence
          Length = 197657

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 521    ttaagatcctctttcttgacattatttt 548
              ||||||||||||||| | ||||||||||
Sbjct: 179848 ttaagatcctctttcattacattatttt 179875
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>emb|AL008724.1|HSB107C2 Human DNA sequence from clone SC22CB-107C2 on chromosome 22q11.2-12.1,
             complete sequence
          Length = 44665

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   atatgtcactgcccgtgatg 392
             ||||||||||||||||||||
Sbjct: 43622 atatgtcactgcccgtgatg 43641
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>gb|AC093290.4| Homo sapiens chromosome 5 clone RP11-47L17, complete sequence
          Length = 179443

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 471    tttctctctgaaatattttt 490
              ||||||||||||||||||||
Sbjct: 175011 tttctctctgaaatattttt 174992
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>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence
          Length = 184981

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   tttctctctgaaatattttt 490
             ||||||||||||||||||||
Sbjct: 46064 tttctctctgaaatattttt 46045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,199,210
Number of Sequences: 3902068
Number of extensions: 5199210
Number of successful extensions: 101426
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101294
Number of HSP's gapped (non-prelim): 127
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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