ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468084.1| Oryza sativa (japonica cultivar-group), mRNA 248 1e-62
2dbj|AK103372.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 9e-58
3ref|XM_479205.1| Oryza sativa (japonica cultivar-group), mRNA 220 3e-54
4gb|AF187062.1|AF187062 Oryza sativa UMP/CMP kinase a (ura6) mRNA... 220 3e-54
5gb|AF187063.1|AF187063 Oryza sativa UMP/CMP kinase b (ura6) mRNA... 212 8e-52
6dbj|AK072973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
7gb|BT017816.1| Zea mays clone EL01N0507E06.c mRNA sequence 155 2e-34
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
9dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
10dbj|AK106691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
11gb|AY105887.1| Zea mays PCO123975 mRNA sequence 131 2e-27
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
13dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
14gb|DQ430575.1| Sorghum bicolor voucher PI221607 locus S02089 gen... 105 1e-19
15gb|DQ430574.1| Sorghum bicolor voucher PI152702 locus S02089 gen... 105 1e-19
16gb|DQ430573.1| Sorghum bicolor voucher NSL87902b locus S02089 ge... 105 1e-19
17gb|DQ430571.1| Sorghum bicolor voucher NSL87666 locus S02089 gen... 105 1e-19
18gb|DQ430570.1| Sorghum bicolor voucher NSL77217 locus S02089 gen... 105 1e-19
19gb|DQ430569.1| Sorghum bicolor voucher NSL77034 locus S02089 gen... 105 1e-19
20gb|DQ430568.1| Sorghum bicolor voucher NSL56174 locus S02089 gen... 105 1e-19
21gb|DQ430567.1| Sorghum bicolor voucher NSL56003 locus S02089 gen... 105 1e-19
22gb|DQ430562.1| Sorghum bicolor voucher BTx623 locus S02089 genom... 105 1e-19
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
24dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
25gb|DQ430579.1| Sorghum propinquum locus S02089 genomic sequence 101 2e-18
26gb|DQ430578.1| Sorghum bicolor voucher PI585454 locus S02089 gen... 101 2e-18
27gb|DQ430577.1| Sorghum bicolor voucher PI267539 locus S02089 gen... 101 2e-18
28gb|DQ430576.1| Sorghum bicolor voucher PI267408 locus S02089 gen... 101 2e-18
29gb|DQ430572.1| Sorghum bicolor voucher NSL87902a locus S02089 ge... 101 2e-18
30gb|DQ430566.1| Sorghum bicolor voucher NSL55243 locus S02089 gen... 101 2e-18
31gb|DQ430565.1| Sorghum bicolor voucher NSL51365 locus S02089 gen... 101 2e-18
32gb|DQ430564.1| Sorghum bicolor voucher NSL51030 locus S02089 gen... 101 2e-18
33gb|DQ430563.1| Sorghum bicolor voucher NSL50875 locus S02089 gen... 101 2e-18
34gb|AY110733.1| Zea mays CL12258_2 mRNA sequence 76 1e-10
35gb|AF086603.1|AF086603 Ceratopteris richardii adenylate kinase (... 52 0.002
36gb|AY110456.1| Zea mays CL15126_1 mRNA sequence 44 0.43
37gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, c... 42 1.7
38gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complet... 42 1.7
39gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, co... 42 1.7
40gb|AC013300.9| Homo sapiens, clone RP11-3O20, complete sequence 42 1.7
41gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, comple... 42 1.7
42gb|AC003098.1|AC003098 Homo sapiens chromosome 17, clone HRPC905... 42 1.7
43gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 6.8
44ref|XM_632282.1| Dictyostelium discoideum hypothetical protein (... 40 6.8
45gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, comp... 40 6.8
46gb|U56964.1| Caenorhabditis elegans cosmid F52E4, complete sequence 40 6.8
47emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chro... 40 6.8
48emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in l... 40 6.8
49dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.8
50emb|BX324194.7| Zebrafish DNA sequence from clone CH211-147A23 i... 40 6.8
51gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21... 40 6.8
52gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, comple... 40 6.8
53emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in... 40 6.8
54gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.8
55gb|AC074363.3| Homo sapiens BAC clone RP11-31F22 from 2, complet... 40 6.8
56emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, ... 40 6.8
57gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f1... 40 6.8
58emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chr... 40 6.8
59dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.8 
>ref|XM_468084.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1088

 Score =  248 bits (125), Expect = 1e-62
 Identities = 161/173 (93%)
 Strand = Plus / Minus

                                                                       
Query: 329 aaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcgatcttttta 388
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 663 aaaatggctttgacatcttcaaacacctcaggaattggttttgcagcatcaatcttttta 604

                                                                       
Query: 389 accttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaaaactttg 448
           |||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 603 accttgtcctttgcattatagtactcaatgacaggcaaactggattcaacaaaaactttg 544

                                                                
Query: 449 aatctcttcctgatagtctcaatgttgtcatcaactctaccctcattgcgtcc 501
           || || |||||||||||||||||||| || |||||||| |||| |||||||||
Sbjct: 543 aaccttttcctgatagtctcaatgttatcgtcaactcttccctgattgcgtcc 491
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>dbj|AK103372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127A22, full
           insert sequence
          Length = 1134

 Score =  232 bits (117), Expect = 9e-58
 Identities = 160/173 (92%), Gaps = 1/173 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 aaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcgatcttttta 388
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 709 aaaatggctttgacatcttcaaacacctcaggaattggttttgcagcatcaatcttttta 650

                                                                       
Query: 389 accttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaaaactttg 448
           |||||||| ||||| | |||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 649 accttgtcctttgcattatagtactcaatgacaggcaaactggatt-aacaaaaactttg 591

                                                                
Query: 449 aatctcttcctgatagtctcaatgttgtcatcaactctaccctcattgcgtcc 501
           || || |||||||||||||||||||| || |||||||| |||| |||||||||
Sbjct: 590 aaccttttcctgatagtctcaatgttatcgtcaactcttccctgattgcgtcc 538
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>ref|XM_479205.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1049

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                       
Query: 303 tctatgcagccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaa 362
           ||||| || |||| ||| |||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 788 tctattcaaccttagcatatggggcaaaaatggctttgacatcttcaaacacttcagaaa 729

                                                                       
Query: 363 ttggttttgcagcatcgatctttttaaccttgtcttttgcgtcatagtactcaatcacag 422
           |||||||||||||||| ||||||||||| ||||  || || |  |||| |||||| ||||
Sbjct: 728 ttggttttgcagcatcaatctttttaactttgttcttcgcattgtagtgctcaattacag 669

                                                                       
Query: 423 gcaaactggattcaacaaaaactttgaatctcttcctgatagtctcaatgttgtcatcaa 482
           ||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 668 gcaaacttgattcaacaaaaactttgaatcttttcctaatggtctcaatgttgtcatcaa 609

                              
Query: 483 ctctaccctcattgcgtcc 501
           ||||||||| |||||||||
Sbjct: 608 ctctaccctgattgcgtcc 590
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>gb|AF187062.1|AF187062 Oryza sativa UMP/CMP kinase a (ura6) mRNA, complete cds
          Length = 1148

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                       
Query: 303 tctatgcagccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaa 362
           ||||| || |||| ||| |||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 773 tctattcaaccttagcatatggggcaaaaatggctttgacatcttcaaacacttcagaaa 714

                                                                       
Query: 363 ttggttttgcagcatcgatctttttaaccttgtcttttgcgtcatagtactcaatcacag 422
           |||||||||||||||| ||||||||||| ||||  || || |  |||| |||||| ||||
Sbjct: 713 ttggttttgcagcatcaatctttttaactttgttcttcgcattgtagtgctcaattacag 654

                                                                       
Query: 423 gcaaactggattcaacaaaaactttgaatctcttcctgatagtctcaatgttgtcatcaa 482
           ||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 653 gcaaacttgattcaacaaaaactttgaatcttttcctaatggtctcaatgttgtcatcaa 594

                              
Query: 483 ctctaccctcattgcgtcc 501
           ||||||||| |||||||||
Sbjct: 593 ctctaccctgattgcgtcc 575
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>gb|AF187063.1|AF187063 Oryza sativa UMP/CMP kinase b (ura6) mRNA, complete cds
          Length = 1203

 Score =  212 bits (107), Expect = 8e-52
 Identities = 176/199 (88%)
 Strand = Plus / Minus

                                                                       
Query: 303 tctatgcagccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaa 362
           ||||| || |||| ||| |||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 780 tctattcaaccttagcatatggggcaaaaatggctttgacatcttcaaacacttcagaaa 721

                                                                       
Query: 363 ttggttttgcagcatcgatctttttaaccttgtcttttgcgtcatagtactcaatcacag 422
           ||| |||||||||||| ||||||||||| ||||  || || |  |||| |||||| ||||
Sbjct: 720 ttgattttgcagcatcaatctttttaactttgttcttcgcattgtagtgctcaattacag 661

                                                                       
Query: 423 gcaaactggattcaacaaaaactttgaatctcttcctgatagtctcaatgttgtcatcaa 482
           ||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 660 gcaaacttgattcaacaaaaactttgaatcttttcctaatggtctcaatgttgtcatcaa 601

                              
Query: 483 ctctaccctcattgcgtcc 501
           ||||||||| |||||||||
Sbjct: 600 ctctaccctgattgcgtcc 582
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>dbj|AK072973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K03, full
           insert sequence
          Length = 1048

 Score =  204 bits (103), Expect = 2e-49
 Identities = 176/199 (88%), Gaps = 1/199 (0%)
 Strand = Plus / Minus

                                                                       
Query: 303 tctatgcagccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaa 362
           ||||| || |||| ||| |||||||||||| ||||| ||||||||||||||| |||| ||
Sbjct: 787 tctattcaaccttagcatatggggcaaaaatggctt-gacatcttcaaacacttcagaaa 729

                                                                       
Query: 363 ttggttttgcagcatcgatctttttaaccttgtcttttgcgtcatagtactcaatcacag 422
           |||||||||||||||| ||||||||||| ||||  || || |  |||| |||||| ||||
Sbjct: 728 ttggttttgcagcatcaatctttttaactttgttcttcgcattgtagtgctcaattacag 669

                                                                       
Query: 423 gcaaactggattcaacaaaaactttgaatctcttcctgatagtctcaatgttgtcatcaa 482
           ||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 668 gcaaacttgattcaacaaaaactttgaatcttttcctaatggtctcaatgttgtcatcaa 609

                              
Query: 483 ctctaccctcattgcgtcc 501
           ||||||||| |||||||||
Sbjct: 608 ctctaccctgattgcgtcc 590
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>gb|BT017816.1| Zea mays clone EL01N0507E06.c mRNA sequence
          Length = 1311

 Score =  155 bits (78), Expect = 2e-34
 Identities = 153/178 (85%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 758 atggggcaaaaatggttttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 699

                                                                       
Query: 381 tctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaa 440
           ||||||||||||||||  ||| ||  || | |||||| ||||||||||| || |||||||
Sbjct: 698 tctttttaaccttgtcccttgagttgtaatgctcaatgacaggcaaacttgactcaacaa 639

                                                                     
Query: 441 aaactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccctcattgcg 498
           |   |||||| || ||  ||||||| |||||||| ||||||||||| |||| ||||||
Sbjct: 638 aggttttgaacctttttttgatagtttcaatgttatcatcaactcttccctgattgcg 581
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                            
Query: 382      ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
                ||||||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 32972181 ctttttaaccttgtcctttgcattatagtactcaatgacaggcaaactggattcaacaaa 32972122

                                                                  
Query: 442      aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
                ||||||||| || |||||||||||||||||||| || |||||||| ||||
Sbjct: 32972121 aactttgaaccttttcctgatagtctcaatgttatcgtcaactcttccct 32972072



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                       
Query: 329      aaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcgatct 383
                |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 32972484 aaaatggctttgacatcttcaaacacctcaggaattggttttgcagcatcaatct 32972430
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                         
Query: 382   ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
             ||||||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 18121 ctttttaaccttgtcctttgcattatagtactcaatgacaggcaaactggattcaacaaa 18062

                                                               
Query: 442   aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
             ||||||||| || |||||||||||||||||||| || |||||||| ||||
Sbjct: 18061 aactttgaaccttttcctgatagtctcaatgttatcgtcaactcttccct 18012



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 329   aaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcgatct 383
             |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18424 aaaatggctttgacatcttcaaacacctcaggaattggttttgcagcatcaatct 18370
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>dbj|AK106691.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C08, full
           insert sequence
          Length = 1595

 Score =  143 bits (72), Expect = 6e-31
 Identities = 129/148 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 ggctttgacatcttcaaacacctcaggaattggttttgcagcatcgatctttttaacctt 393
           |||||| ||||||||||||||||||||   ||||||||  ||||| ||||| |||||| |
Sbjct: 886 ggctttcacatcttcaaacacctcaggggctggttttgtcgcatcaatcttcttaaccat 827

                                                                       
Query: 394 gtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaaaactttgaatct 453
           | ||||||  ||||| |||||||| |||||||| |||||||| ||||||||||| |||||
Sbjct: 826 gccttttgactcataatactcaatgacaggcaagctggattctacaaaaactttcaatct 767

                                       
Query: 454 cttcctgatagtctcaatgttgtcatca 481
            |||||||||||||||||||| ||||||
Sbjct: 766 tttcctgatagtctcaatgttatcatca 739
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>gb|AY105887.1| Zea mays PCO123975 mRNA sequence
          Length = 1471

 Score =  131 bits (66), Expect = 2e-27
 Identities = 150/178 (84%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |
Sbjct: 991 atggggcaaaaatggctttgacgtcttcaaacacctcggggattggttttgcagcatcaa 932

                                                                       
Query: 381 tctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaa 440
           |||||||||||||||| |||| ||  || | |||||| ||||||| | | || |||||||
Sbjct: 931 tctttttaaccttgtcctttgagttgtaatgctcaatgacaggcagagttgagtcaacaa 872

                                                                     
Query: 441 aaactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccctcattgcg 498
           |   |||||| || ||  ||||||| |||||||| |||||||| || |||| ||||||
Sbjct: 871 aggttttgaacctttttttgatagtttcaatgttatcatcaacccttccctgattgcg 814
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 2e-24
 Identities = 79/85 (92%)
 Strand = Plus / Plus

                                                                            
Query: 407      tagtactcaatcacaggcaaactggattcaacaaaaactttgaatctcttcctgatagtc 466
                |||| |||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct: 25826391 tagtgctcaattacaggcaaacttgattcaacaaaaactttgaatcttttcctaatggtc 25826450

                                         
Query: 467      tcaatgttgtcatcaactctaccct 491
                |||||||||||||||||||||||||
Sbjct: 25826451 tcaatgttgtcatcaactctaccct 25826475



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 312      ccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttg 371
                |||| ||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct: 25826170 ccttagcatatggggcaaaaatggctttgacatcttcaaacacttcagaaattggttttg 25826229

                            
Query: 372      cagcatcgatct 383
                ||||||| ||||
Sbjct: 25826230 cagcatcaatct 25826241
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0524E08
          Length = 154696

 Score =  121 bits (61), Expect = 2e-24
 Identities = 79/85 (92%)
 Strand = Plus / Plus

                                                                          
Query: 407    tagtactcaatcacaggcaaactggattcaacaaaaactttgaatctcttcctgatagtc 466
              |||| |||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||
Sbjct: 143553 tagtgctcaattacaggcaaacttgattcaacaaaaactttgaatcttttcctaatggtc 143612

                                       
Query: 467    tcaatgttgtcatcaactctaccct 491
              |||||||||||||||||||||||||
Sbjct: 143613 tcaatgttgtcatcaactctaccct 143637



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                          
Query: 312    ccttggcaaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttg 371
              |||| ||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct: 143332 ccttagcatatggggcaaaaatggctttgacatcttcaaacacttcagaaattggttttg 143391

                          
Query: 372    cagcatcgatct 383
              ||||||| ||||
Sbjct: 143392 cagcatcaatct 143403
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>gb|DQ430575.1| Sorghum bicolor voucher PI221607 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430574.1| Sorghum bicolor voucher PI152702 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430573.1| Sorghum bicolor voucher NSL87902b locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430571.1| Sorghum bicolor voucher NSL87666 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430570.1| Sorghum bicolor voucher NSL77217 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430569.1| Sorghum bicolor voucher NSL77034 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430568.1| Sorghum bicolor voucher NSL56174 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430567.1| Sorghum bicolor voucher NSL56003 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|DQ430562.1| Sorghum bicolor voucher BTx623 locus S02089 genomic sequence
          Length = 725

 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 319 aaatggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 aaatggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatc 619

                
Query: 379 gatct 383
            ||||
Sbjct: 618 aatct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  103 bits (52), Expect = 5e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                           
Query: 386     ttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaaaact 445
               |||||| || ||||||  ||||| |||||||| |||||||| |||||||| |||||||||
Sbjct: 5234316 ttaaccatgccttttgactcataatactcaatgacaggcaagctggattctacaaaaact 5234257

                                                   
Query: 446     ttgaatctcttcctgatagtctcaatgttgtcatca 481
               || ||||| |||||||||||||||||||| ||||||
Sbjct: 5234256 ttcaatcttttcctgatagtctcaatgttatcatca 5234221



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 334     ggctttgacatcttcaaacacctcagg 360
               |||||| ||||||||||||||||||||
Sbjct: 5235101 ggctttcacatcttcaaacacctcagg 5235075
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score =  103 bits (52), Expect = 5e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                          
Query: 386    ttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaaaact 445
              |||||| || ||||||  ||||| |||||||| |||||||| |||||||| |||||||||
Sbjct: 101038 ttaaccatgccttttgactcataatactcaatgacaggcaagctggattctacaaaaact 100979

                                                  
Query: 446    ttgaatctcttcctgatagtctcaatgttgtcatca 481
              || ||||| |||||||||||||||||||| ||||||
Sbjct: 100978 ttcaatcttttcctgatagtctcaatgttatcatca 100943



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 334    ggctttgacatcttcaaacacctcagg 360
              |||||| ||||||||||||||||||||
Sbjct: 101823 ggctttcacatcttcaaacacctcagg 101797
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>gb|DQ430579.1| Sorghum propinquum locus S02089 genomic sequence
          Length = 737

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 688 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 629

              
Query: 381 tct 383
           |||
Sbjct: 628 tct 626



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                       
Query: 412 ctcaatcacaggcaaactggattcaacaaaaactttgaatctcttcctgatagtctcaat 471
           |||||| ||||||| ||| |||||||||||   ||| || || ||  ||||||| |||||
Sbjct: 337 ctcaatgacaggcagacttgattcaacaaaggttttaaacctttttttgatagtttcaat 278

                               
Query: 472 gttgtcatcaactctaccct 491
           ||| ||||||||||| ||||
Sbjct: 277 gttatcatcaactcttccct 258
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>gb|DQ430578.1| Sorghum bicolor voucher PI585454 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430577.1| Sorghum bicolor voucher PI267539 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430576.1| Sorghum bicolor voucher PI267408 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430572.1| Sorghum bicolor voucher NSL87902a locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430566.1| Sorghum bicolor voucher NSL55243 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430565.1| Sorghum bicolor voucher NSL51365 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430564.1| Sorghum bicolor voucher NSL51030 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
to top
>gb|DQ430563.1| Sorghum bicolor voucher NSL50875 locus S02089 genomic sequence
          Length = 725

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 321 atggggcaaaaacggctttgacatcttcaaacacctcaggaattggttttgcagcatcga 380
           |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 676 atggggcaaaaatggctttgacgtcttcaaacacctcaggaattggttttgcagcatcaa 617

              
Query: 381 tct 383
           |||
Sbjct: 616 tct 614



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctttttaaccttgtcttttgcgtcatagtactcaatcacaggcaaactggattcaacaaa 441
           |||||||||||||||  ||| ||  || | |||||| ||||||| ||| |||||||||||
Sbjct: 367 ctttttaaccttgtcccttgagttgtaatgctcaatgacaggcagacttgattcaacaaa 308

                                                             
Query: 442 aactttgaatctcttcctgatagtctcaatgttgtcatcaactctaccct 491
              ||| || || ||  ||||||| |||||||| ||||||||||| ||||
Sbjct: 307 ggttttaaacctttttttgatagtttcaatgttatcatcaactcttccct 258
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>gb|AY110733.1| Zea mays CL12258_2 mRNA sequence
          Length = 580

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 337 tttgacatcttcaaacacctcaggaattggttttgcagcatc 378
           |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 484 tttgacgtcttcaaacacctcaggaattggttttgcagcatc 525
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>gb|AF086603.1|AF086603 Ceratopteris richardii adenylate kinase (ADK1) mRNA, complete cds
          Length = 1104

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                       
Query: 431 gattcaacaaaaactttgaatc-tcttcctgatagtctcaatgttgtcatcaactctacc 489
           |||||||  ||||||||||| | | ||| |||| |||||||||||||||||||||| |||
Sbjct: 691 gattcaatgaaaactttgaaacgttttcttgattgtctcaatgttgtcatcaactcgacc 632

             
Query: 490 ct 491
           ||
Sbjct: 631 ct 630
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>gb|AY110456.1| Zea mays CL15126_1 mRNA sequence
          Length = 912

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 454 cttcctgatagtctcaatgttgtcatcaactctaccct 491
           |||| |||| ||||||||||| ||||||||||| ||||
Sbjct: 298 cttcttgattgtctcaatgttatcatcaactctcccct 335
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>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence
          Length = 152183

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    caggcaaactggattcaacaa 440
              |||||||||||||||||||||
Sbjct: 125294 caggcaaactggattcaacaa 125314
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>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence
          Length = 204508

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 427   actggattcaacaaaaacttt 447
             |||||||||||||||||||||
Sbjct: 94391 actggattcaacaaaaacttt 94411
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>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence
          Length = 150125

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    caggcaaactggattcaacaa 440
              |||||||||||||||||||||
Sbjct: 105886 caggcaaactggattcaacaa 105866
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>gb|AC013300.9| Homo sapiens, clone RP11-3O20, complete sequence
          Length = 119711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   cattccatttatcacctttgg 287
             |||||||||||||||||||||
Sbjct: 17481 cattccatttatcacctttgg 17501
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>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence
          Length = 184194

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 267   cattccatttatcacctttgg 287
             |||||||||||||||||||||
Sbjct: 53065 cattccatttatcacctttgg 53045
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>gb|AC003098.1|AC003098 Homo sapiens chromosome 17, clone HRPC905N1, complete sequence
          Length = 94752

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 380   atctttttaaccttgtctttt 400
             |||||||||||||||||||||
Sbjct: 60770 atctttttaaccttgtctttt 60750
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      gatacaccaacaatgggtgg 118
               ||||||||||||||||||||
Sbjct: 1698170 gatacaccaacaatgggtgg 1698189
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>ref|XM_632282.1| Dictyostelium discoideum hypothetical protein (DDB0187318), partial
            mRNA
          Length = 4314

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 267  cattccatttatcacctttg 286
            ||||||||||||||||||||
Sbjct: 2227 cattccatttatcacctttg 2208
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>gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, complete sequence
          Length = 163319

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaattcaattttctgtaat 20
             ||||||||||||||||||||
Sbjct: 41160 aaaattcaattttctgtaat 41179
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>gb|U56964.1| Caenorhabditis elegans cosmid F52E4, complete sequence
          Length = 33796

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 422  ggcaaactggattcaacaaaaact 445
            ||||||||| ||||||||||||||
Sbjct: 8708 ggcaaactgtattcaacaaaaact 8685
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>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains part
             of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM), complete sequence
          Length = 91827

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   gtttgtaatcacatatatgt 235
             ||||||||||||||||||||
Sbjct: 39739 gtttgtaatcacatatatgt 39758
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>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete
              sequence
          Length = 222405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 380    atctttttaaccttgtcttttgcgtcat 407
              ||||||||  ||||||||||||||||||
Sbjct: 127820 atcttttttcccttgtcttttgcgtcat 127847
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 325     ggcaaaaacggctttgacatcttc 348
               |||||||| |||||||||||||||
Sbjct: 2337110 ggcaaaaagggctttgacatcttc 2337133
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>emb|BX324194.7| Zebrafish DNA sequence from clone CH211-147A23 in linkage group 5,
              complete sequence
          Length = 187691

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    aatgggtggtaaataaaaac 129
              ||||||||||||||||||||
Sbjct: 175327 aatgggtggtaaataaaaac 175346
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>gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21, complete sequence
          Length = 141874

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   cacaatggtacaggtacact 92
            ||||||||||||||||||||
Sbjct: 3847 cacaatggtacaggtacact 3866
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>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence
          Length = 187067

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ccccaaaccagatctaattt 163
             ||||||||||||||||||||
Sbjct: 86955 ccccaaaccagatctaattt 86936
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>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5,
             complete sequence
          Length = 191453

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aatgggtggtaaataaaaac 129
             ||||||||||||||||||||
Sbjct: 57849 aatgggtggtaaataaaaac 57830
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 248    gcaaaaccttgtatgaaatcattc 271
              |||||||||| |||||||||||||
Sbjct: 879345 gcaaaaccttttatgaaatcattc 879368
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>gb|AC074363.3| Homo sapiens BAC clone RP11-31F22 from 2, complete sequence
          Length = 151325

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gtggtaaataaaaacttcta 134
              ||||||||||||||||||||
Sbjct: 134452 gtggtaaataaaaacttcta 134433
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>emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, complete sequence
          Length = 167613

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 380    atctttttaaccttgtcttttgcgtcat 407
              ||||||||  ||||||||||||||||||
Sbjct: 151468 atcttttttcccttgtcttttgcgtcat 151441
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>gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H164), complete
             sequence
          Length = 120452

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   aatcacaggcaaactggatt 434
             ||||||||||||||||||||
Sbjct: 54412 aatcacaggcaaactggatt 54431
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>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete
             sequence
          Length = 180784

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   tttttaaccttgtcttttgc 402
             ||||||||||||||||||||
Sbjct: 58307 tttttaaccttgtcttttgc 58288
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>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a,
             complete sequence
          Length = 54726

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 343   atcttcaaacacctcaggaattggtttt 370
             ||||||||| |||| |||||||||||||
Sbjct: 12103 atcttcaaaaaccttaggaattggtttt 12130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,246,336
Number of Sequences: 3902068
Number of extensions: 5246336
Number of successful extensions: 100997
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100740
Number of HSP's gapped (non-prelim): 215
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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