>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = -3

Query: 472 RQGRQDLXXXXXXXXXXXXRYPQEASRQEAAHQAVGAGEEGHARQEGPRQEGQEVESPSS 293
           R+GR                 P E +   A     G G  G AR  GPRQ+ +    P  
Sbjct: 445 RKGRMGRQLETTATSASATGGPAEEAGASAPEGQAGGGPRGRAR--GPRQQARRRHGPQR 502

Query: 292 RNEFPLA 272
           R   P A
Sbjct: 503 RRGPPQA 509

>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 555

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 406 QEASRQEAAHQAVGAGEEGHARQEGPRQEGQE 311
           +EA  +EA  +  GA EE    +EG  +EG+E
Sbjct: 486 EEAGGEEAEEEEEGAKEESEEGKEGEEEEGEE 517


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,598,549
Number of Sequences: 219361
Number of extensions: 792400
Number of successful extensions: 2112
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)