>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin
          Length = 436

 Score = 67.9 bits (34), Expect = 6e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 38  aagatacaaacgataaaactgcatcacgggacggtacagaaacaaagaca 87
           |||||||||||||||| |||||||||| | | ||||||||||||||||||
Sbjct: 384 aagatacaaacgataacactgcatcacagtatggtacagaaacaaagaca 335



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gctcacttattcatagttca 37
           ||||||||||||||||||||
Sbjct: 434 gctcacttattcatagttca 415

>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin
          Length = 436

 Score = 67.9 bits (34), Expect = 6e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 38  aagatacaaacgataaaactgcatcacgggacggtacagaaacaaagaca 87
           |||||||||||||||| |||||||||| | | ||||||||||||||||||
Sbjct: 384 aagatacaaacgataacactgcatcacagtatggtacagaaacaaagaca 335



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gctcacttattcatagttca 37
           ||||||||||||||||||||
Sbjct: 434 gctcacttattcatagttca 415

>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds
          Length = 400

 Score = 67.9 bits (34), Expect = 6e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 38  aagatacaaacgataaaactgcatcacgggacggtacagaaacaaagaca 87
           |||||||||||||||| |||||||||| | | ||||||||||||||||||
Sbjct: 365 aagatacaaacgataacactgcatcacagtatggtacagaaacaaagaca 316

>gb|AC012100.7| Homo sapiens chromosome 15 clone RP11-507J18 map 15q21.1, complete
              sequence
          Length = 195068

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 24     ttattcatagttcaaagatacaaa 47
              ||||||||||||||||||||||||
Sbjct: 158559 ttattcatagttcaaagatacaaa 158582

>gb|AC137978.8| Mus musculus chromosome 1, clone RP24-468M12, complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     acagaaacaaagacacagac 92
              ||||||||||||||||||||
Sbjct: 181532 acagaaacaaagacacagac 181513

>gb|AC157794.3| Mus musculus chromosome 1, clone RP24-111L14, complete sequence
          Length = 157029

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   acagaaacaaagacacagac 92
            ||||||||||||||||||||
Sbjct: 8673 acagaaacaaagacacagac 8692

>gb|AC067819.10| Homo sapiens chromosome 18, clone RP11-585K6, complete sequence
          Length = 216972

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ttattcatagttcaaagata 43
              ||||||||||||||||||||
Sbjct: 212394 ttattcatagttcaaagata 212375

>gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, complete sequence
          Length = 169610

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 26    attcatagttcaaagatacaaacgataa 53
             |||||||| ||||||||||||| |||||
Sbjct: 73846 attcataggtcaaagatacaaaagataa 73819

>gb|AC005909.1|AC005909 Homo sapiens chromosome 18 BAC RPCI11-128D14 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 137557

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ttattcatagttcaaagata 43
             ||||||||||||||||||||
Sbjct: 76850 ttattcatagttcaaagata 76831

>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     acagaaacaaagacacaga 91
              |||||||||||||||||||
Sbjct: 198740 acagaaacaaagacacaga 198722

>ref|NM_111095.3| Arabidopsis thaliana FMN binding / electron transporter/
            oxidoreductase AT3G02280 mRNA, complete cds
          Length = 2199

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   cagaaacaaagacacagac 92
            |||||||||||||||||||
Sbjct: 1660 cagaaacaaagacacagac 1678

>gb|AC102197.7| Mus musculus chromosome 1, clone RP24-466J11, complete sequence
          Length = 150253

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     cacttattcatagttcaaa 39
              |||||||||||||||||||
Sbjct: 130435 cacttattcatagttcaaa 130417

>gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, complete sequence
          Length = 253153

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     acagaaacaaagacacaga 91
              |||||||||||||||||||
Sbjct: 184760 acagaaacaaagacacaga 184778

>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence
          Length = 178625

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 70     ggtacagaaacaaagacacagac 92
              |||||| ||||||||||||||||
Sbjct: 144763 ggtacataaacaaagacacagac 144741

>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete
             sequence
          Length = 152220

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    acagaaacaaagacacaga 91
             |||||||||||||||||||
Sbjct: 65552 acagaaacaaagacacaga 65570

>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete
             sequence
          Length = 100991

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    cggtacagaaacaaagaca 87
             |||||||||||||||||||
Sbjct: 98673 cggtacagaaacaaagaca 98655

>gb|BT010739.1| Arabidopsis thaliana At3g02280 gene, complete cds
          Length = 1872

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   cagaaacaaagacacagac 92
            |||||||||||||||||||
Sbjct: 1515 cagaaacaaagacacagac 1533

>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    cagaaacaaagacacagac 92
             |||||||||||||||||||
Sbjct: 17579 cagaaacaaagacacagac 17561

>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence
          Length = 100985

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    cggtacagaaacaaagaca 87
             |||||||||||||||||||
Sbjct: 98675 cggtacagaaacaaagaca 98657

>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete
              sequence
          Length = 191856

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     catagttcaaagatacaaa 47
              |||||||||||||||||||
Sbjct: 130966 catagttcaaagatacaaa 130984

>emb|Z99114.2|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2014895 to
              2207855
          Length = 192961

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     agttcaaagatacaaacga 50
              |||||||||||||||||||
Sbjct: 185469 agttcaaagatacaaacga 185451

>gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, complete sequence
          Length = 160380

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 70     ggtacagaaacaaagacacagac 92
              |||||| ||||||||||||||||
Sbjct: 141794 ggtacataaacaaagacacagac 141816

>emb|AL645792.7| Zebrafish DNA sequence from clone RP71-1D10 in linkage group 14 Contains
              two novel genes similar to MATR3 (matrin 3), a novel gene
              similar to PDE6A (cGMP-specific phosphodiesterase 6A alpha
              (rod)), a novel gene similar to PERC (PGC-1-related
              estrogen receptor alpha coactivator) and two CpG islands,
              complete sequence
          Length = 170221

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     cagaaacaaagacacagac 92
              |||||||||||||||||||
Sbjct: 140282 cagaaacaaagacacagac 140300

>emb|AL592495.1| Zebrafish DNA sequence from clone BUSM1-129I22 in linkage group 22
             Contains a novel gene similar to human and rodent IER5
             (immediately early response 5), the scl gene for stem-cell
             leukemia hematopoietic transcription factor [tal-1 /
             T-cell acute lymphocytic leukemia 1 (TAL1); T-cell acute
             lymphocytic leukemia 1 (Tal1)],  a novel gene, a novel
             gene for a protein similar to human PDZ domain proteins,
             ESTs, STSs, GSSs and two CpG islands.ESTs, STSs, GSSs and
             two CpG islands, complete sequence
          Length = 84543

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    acaaagacacagacgagac 97
             |||||||||||||||||||
Sbjct: 21594 acaaagacacagacgagac 21576

>gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, complete sequence
          Length = 164201

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    cacttattcatagttcaaa 39
             |||||||||||||||||||
Sbjct: 17822 cacttattcatagttcaaa 17804

>gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, complete sequence
          Length = 156503

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     acagaaacaaagacacaga 91
              |||||||||||||||||||
Sbjct: 136728 acagaaacaaagacacaga 136710

>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     acaaacgataaaactgcat 61
              |||||||||||||||||||
Sbjct: 295594 acaaacgataaaactgcat 295576

>emb|BX824439.1|CNS0A4Q4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH49ZB07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2140

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   cagaaacaaagacacagac 92
            |||||||||||||||||||
Sbjct: 1659 cagaaacaaagacacagac 1677

>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence
          Length = 217844

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     acagaaacaaagacacaga 91
              |||||||||||||||||||
Sbjct: 189294 acagaaacaaagacacaga 189276

>ref|XM_224715.3| PREDICTED: Rattus norvegicus similar to mKIAA1623 protein
            (LOC306340), mRNA
          Length = 3324

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 79   acaaagacacagacgagac 97
            |||||||||||||||||||
Sbjct: 1526 acaaagacacagacgagac 1508

>dbj|AK183328.1| Mus musculus cDNA, clone:Y0G0125I01, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000036125, based on BLAT search
          Length = 241

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 74 cagaaacaaagacacagac 92
          |||||||||||||||||||
Sbjct: 9  cagaaacaaagacacagac 27

>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22,
             complete sequence
          Length = 76145

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    acaaagacacagacgagac 97
             |||||||||||||||||||
Sbjct: 54282 acaaagacacagacgagac 54264

>emb|AL121769.4|CNS01DSD Human chromosome 14 DNA sequence BAC R-299L17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167344

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     agcagagggtcagggctca 22
             |||||||||||||||||||
Sbjct: 72154 agcagagggtcagggctca 72172

>gb|AC140038.13| Mus musculus chromosome 1, clone RP24-290D14, complete sequence
          Length = 171967

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    acagaaacaaagacacaga 91
             |||||||||||||||||||
Sbjct: 11992 acagaaacaaagacacaga 12010

>gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome
          Length = 134416

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    agttcaaagatacaaacga 50
             |||||||||||||||||||
Sbjct: 85282 agttcaaagatacaaacga 85300

>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    acagaaacaaagacacaga 91
             |||||||||||||||||||
Sbjct: 38519 acagaaacaaagacacaga 38501

>gb|AC112790.5| Mus musculus BAC clone RP23-160A1 from 10, complete sequence
          Length = 211714

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    acagaaacaaagacacaga 91
             |||||||||||||||||||
Sbjct: 27164 acagaaacaaagacacaga 27146

>dbj|AB075858.1| Homo sapiens mRNA for KIAA1978 protein
          Length = 4694

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 73   acagaaacaaagacacaga 91
            |||||||||||||||||||
Sbjct: 1670 acagaaacaaagacacaga 1688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,004,238
Number of Sequences: 3902068
Number of extensions: 1004238
Number of successful extensions: 75344
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75283
Number of HSP's gapped (non-prelim): 61
length of query: 109
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 88
effective length of database: 17,151,101,840
effective search space: 1509296961920
effective search space used: 1509296961920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)