ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 93 1e-19
2MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 92 4e-19
3MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 91 5e-19
4MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 87 1e-17
5MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 87 1e-17
6MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 86 3e-17
7MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 49 3e-06
8MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy... 48 5e-06
9MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast... 46 2e-05
10FOXL1_MOUSE (Q64731) Forkhead box protein L1 (Forkhead-related p... 32 0.28
11SYL_BRUSU (Q8FYQ7) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 30 1.1
12SYL_BRUME (Q8YJ44) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 30 1.1
13K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11) (... 30 1.4
14U171_DROME (Q9VUB4) Hypothetical UPF0171 protein CG8783 30 1.8
15PURL_METMA (Q8PYK1) Phosphoribosylformylglycinamidine synthase I... 29 2.4
16S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute car... 29 2.4
17RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1 29 2.4
18FOXL1_HUMAN (Q12952) Forkhead box protein L1 (Forkhead-related p... 28 5.3
19CJ057_PONPY (Q5R9A6) Protein C10orf57 homolog 28 5.3
20CJ057_HUMAN (Q8TBM7) Protein C10orf57 28 5.3
21Y1629_SYNY3 (P74346) Hypothetical RNA pseudouridine synthase slr... 28 5.3
22S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute car... 28 5.3
23VGLH_SHV21 (P16492) Glycoprotein H precursor 28 6.9
24PURL_METAC (Q8TIT6) Phosphoribosylformylglycinamidine synthase I... 28 6.9
25CEFD_STRCL (P18549) Isopenicillin N epimerase (EC 5.1.1.17) 27 9.0
26A4_DROME (P14599) Beta-amyloid-like protein precursor 27 9.0

>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VG+++LFGD D  S KPKFGSYW+K+ K VG FLEGGSP+EN AIAKLAR QP   S   
Sbjct: 364 VGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEV 423

Query: 220 LKAAGLQFATS 188
           L   GL FAT+
Sbjct: 424 LSKEGLSFATN 434



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>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VG+ +LFGD D +S+KPKFG+YW+K+GK VG FLEGG+PDEN AIAK+AR +P      +
Sbjct: 362 VGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQ 421

Query: 220 LKAAGLQFAT 191
           L   GL FA+
Sbjct: 422 LAEEGLSFAS 431



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>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 46/77 (59%), Positives = 55/77 (71%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VG+++LFGD D  S KPKFG+YWVKDGK VGVFLEGG+ +E+ AIAK+AR QP   S   
Sbjct: 365 VGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDV 424

Query: 220 LKAAGLQFATSKI*TSV 170
           L   GL FAT    TS+
Sbjct: 425 LSEEGLSFATKFYSTSL 441



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>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VG+ +LFGDAD +SA  KFG YW+KDGK VG FLE GSP+EN AIAK+A+ QPP A+  +
Sbjct: 363 VGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPP-ATLDQ 421

Query: 220 LKAAGLQFAT 191
           L   G+ FA+
Sbjct: 422 LAQEGISFAS 431



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>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VGDA+LFGD    SA  KFGSYW+KDGK VG FLE GSP+EN AIAK+AR QP   S   
Sbjct: 363 VGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDL 422

Query: 220 LKAAGLQFAT 191
           L   G+ FA+
Sbjct: 423 LLKEGISFAS 432



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>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 39/69 (56%), Positives = 53/69 (76%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VGD++LFGD++ S+ KP+FG+YWV+ GK VG F+EGGS DEN A+AK+A+ +P A S  E
Sbjct: 363 VGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDE 422

Query: 220 LKAAGLQFA 194
           L   G+ FA
Sbjct: 423 LVKQGISFA 431



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>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = -1

Query: 397 GDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAA-SPGE 221
           GD + FG+ +   +   FG+YWVK G  VG FLEGG+ +E   I+K  + +P       E
Sbjct: 360 GDVVHFGEYEDGKS---FGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEE 416

Query: 220 LKAAGLQFA 194
           L+  GL FA
Sbjct: 417 LEREGLGFA 425



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>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221
           VG+ +LF D         FG+YW+K    VGVFLEGG+PDE     K+AR QPP  S  +
Sbjct: 119 VGETVLFPD--------NFGTYWIK---VVGVFLEGGTPDE----YKVARVQPPVESLDQ 163

Query: 220 L 218
           L
Sbjct: 164 L 164



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>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = -1

Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQP 242
           VG+ +  G+ D     PK  ++W++ G+  GV +E GSP+E   + KLAR QP
Sbjct: 420 VGETVEVGNFD-----PKIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQP 467



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>FOXL1_MOUSE (Q64731) Forkhead box protein L1 (Forkhead-related protein FKHL11)|
           (Transcription factor FKH-6)
          Length = 337

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = -1

Query: 382 FGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAAGL 203
           F        +P  GSYW  D +C+ +F       ENG   +  R   PAA   E K   +
Sbjct: 107 FVKVPREKGRPGKGSYWTLDPRCLDMF-------ENGNYRRRKRKPKPAAGSPEAKRTRV 159

Query: 202 QFATSKI 182
           +   S++
Sbjct: 160 EPPESEV 166



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>SYL_BRUSU (Q8FYQ7) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 877

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 325 DGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAA 209
           DGK V   L+ G+P E G+I K+++ +     P ++ A+
Sbjct: 607 DGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIAS 645



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>SYL_BRUME (Q8YJ44) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 877

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 325 DGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAA 209
           DGK V   L+ G+P E G+I K+++ +     P ++ A+
Sbjct: 607 DGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIAS 645



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>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme C) (PFK-C)
          Length = 784

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 376 DADHSSAKPKFGSYWVKDGKCVGVFLEGG-SPDENGAIAKLAR 251
           D+  SSA PK+  +   DGK +GV   GG +   N A+  + R
Sbjct: 5   DSSSSSAYPKYLEHLSGDGKAIGVLTSGGDAQGMNAAVRAVVR 47



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>U171_DROME (Q9VUB4) Hypothetical UPF0171 protein CG8783|
          Length = 610

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 191 QQDLNLGVLGVFVTWILDHHTYM--HTYI 111
           QQ    G+L   V W+L HH  M  HTY+
Sbjct: 385 QQPARQGILAQMVIWMLQHHLLMQLHTYV 413



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>PURL_METMA (Q8PYK1) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 716

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -1

Query: 304 FLEGGSPD-ENGAIAKLARDQ-PPAASPGELKAAGLQFATSKI*TSVSWVYLLHGY*TTI 131
           FL GG+P  E  + A + R++     +P +LKAA ++  +S    S  W+Y  + +   +
Sbjct: 353 FLTGGAPTCEKPSEAPIHREEGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQL 412

Query: 130 RTCI 119
           RT +
Sbjct: 413 RTVV 416



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>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 539

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = +2

Query: 248 VPRELGDGAVLVRRPALQEHAHALAVLHPVRPELGLGGAVVGV 376
           +P ELGD A+L++          L +L  V   LGLGGAV+GV
Sbjct: 424 LPHELGDFAMLLQSGL---SFRRLLLLSLVSGALGLGGAVLGV 463



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>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1|
          Length = 893

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = -1

Query: 376 DADHSSAKPKFGSYWVKDGKCVGVFLEGGS---------PDENGAIAKLARDQPP 239
           D+   SA+P  GS+W +  +   V+  GG+         P  +G  A+ A++ PP
Sbjct: 709 DSSTPSARPPAGSWWDQLTQASRVYASGGTEGFPLLRWGPRRHGTTAEAAQEAPP 763



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>FOXL1_HUMAN (Q12952) Forkhead box protein L1 (Forkhead-related protein FKHL11)|
           (Forkhead-related transcription factor 7) (FREAC-7)
          Length = 345

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/56 (28%), Positives = 21/56 (37%)
 Frame = -1

Query: 382 FGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELK 215
           F        +P  GSYW  D +C+ +F       ENG   +  R   P     E K
Sbjct: 107 FVKVPREKGRPGKGSYWTLDPRCLDMF-------ENGNYRRRKRKPKPGPGAPEAK 155



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>CJ057_PONPY (Q5R9A6) Protein C10orf57 homolog|
          Length = 123

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 179 NLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHIL 51
           NLG LG F  +++DHH   HT +   Y +  +  +  S+Y I+
Sbjct: 42  NLGPLGPFTQYLVDHH---HTLLCNGYWLAWLIHVGESLYAIV 81



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>CJ057_HUMAN (Q8TBM7) Protein C10orf57|
          Length = 123

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 179 NLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHIL 51
           NLG LG F  +++DHH   HT +   Y +  +  +  S+Y I+
Sbjct: 42  NLGPLGPFTQYLVDHH---HTLLCNGYWLAWLIHVGESLYAIV 81



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>Y1629_SYNY3 (P74346) Hypothetical RNA pseudouridine synthase slr1629 (EC|
           5.4.99.-) (RNA-uridine isomerase) (RNA pseudouridylate
           synthase)
          Length = 327

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 269 GAVLVRRPALQEHAHALAVLHPVRPEL 349
           G+V V  P    HAH L+++HPV  E+
Sbjct: 278 GSVNVNLPGQALHAHQLSLIHPVSGEI 304



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>S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 535

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +2

Query: 248 VPRELGDGAVLVRRPALQEHAHALAVLHPVRPELGLGGAVVGV 376
           +P ELGD A+L++          L +L  V   LGLGGA +GV
Sbjct: 420 LPHELGDFAMLLQEGL---SFRKLLLLSLVSGALGLGGAALGV 459



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>VGLH_SHV21 (P16492) Glycoprotein H precursor|
          Length = 717

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = -3

Query: 191 QQDLNLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHILFLHI*VEASIKPT 12
           Q+++NLG  G F T  + HHT +    +      L   I++S   I   +I    S KP 
Sbjct: 514 QKEINLGTNGFFQTLHMRHHTSLEILPIIKCIKSLSTDIILS---IPLKNITYVISTKPV 570

Query: 11  P 9
           P
Sbjct: 571 P 571



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>PURL_METAC (Q8TIT6) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 715

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -1

Query: 304 FLEGGSP--DENGAIAKLARDQPPAASPGELKAAGLQFATSKI*TSVSWVYLLHGY*TTI 131
           FL GG+P  ++      L  +     +P +LK A L+  +S    S  W+Y  + +   +
Sbjct: 353 FLTGGAPTCEKPSEAPTLREEGKKPETPEDLKVAFLKVLSSYNIASKEWIYRQYDHEVQL 412

Query: 130 RTCI 119
           RT +
Sbjct: 413 RTVV 416



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>CEFD_STRCL (P18549) Isopenicillin N epimerase (EC 5.1.1.17)|
          Length = 397

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = +2

Query: 257 ELGDGAVLVRRPALQEHAHAL-------AVLHPVRPELGLGGAV 367
           ELG GA+  RR  L +HA  L        +L P  PEL  GG V
Sbjct: 293 ELGPGAIRARRRELTDHARRLLADRPGRTLLTPDSPELS-GGMV 335



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>A4_DROME (P14599) Beta-amyloid-like protein precursor|
          Length = 887

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 282 SGDPPSRNTPTHLPSFTQYDPN 347
           +G PPS   PT  P FT +DP+
Sbjct: 385 AGAPPSTAQPTSDPYFTHFDPH 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,375,700
Number of Sequences: 219361
Number of extensions: 977268
Number of successful extensions: 2753
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2752
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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