Clone Name | rbart13c03 |
---|---|
Clone Library Name | barley_pub |
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 93.2 bits (230), Expect = 1e-19 Identities = 45/71 (63%), Positives = 52/71 (73%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VG+++LFGD D S KPKFGSYW+K+ K VG FLEGGSP+EN AIAKLAR QP S Sbjct: 364 VGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEV 423 Query: 220 LKAAGLQFATS 188 L GL FAT+ Sbjct: 424 LSKEGLSFATN 434
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 91.7 bits (226), Expect = 4e-19 Identities = 41/70 (58%), Positives = 53/70 (75%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VG+ +LFGD D +S+KPKFG+YW+K+GK VG FLEGG+PDEN AIAK+AR +P + Sbjct: 362 VGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQ 421 Query: 220 LKAAGLQFAT 191 L GL FA+ Sbjct: 422 LAEEGLSFAS 431
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 91.3 bits (225), Expect = 5e-19 Identities = 46/77 (59%), Positives = 55/77 (71%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VG+++LFGD D S KPKFG+YWVKDGK VGVFLEGG+ +E+ AIAK+AR QP S Sbjct: 365 VGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDV 424 Query: 220 LKAAGLQFATSKI*TSV 170 L GL FAT TS+ Sbjct: 425 LSEEGLSFATKFYSTSL 441
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 87.0 bits (214), Expect = 1e-17 Identities = 42/70 (60%), Positives = 53/70 (75%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VG+ +LFGDAD +SA KFG YW+KDGK VG FLE GSP+EN AIAK+A+ QPP A+ + Sbjct: 363 VGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPP-ATLDQ 421 Query: 220 LKAAGLQFAT 191 L G+ FA+ Sbjct: 422 LAQEGISFAS 431
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 87.0 bits (214), Expect = 1e-17 Identities = 43/70 (61%), Positives = 49/70 (70%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VGDA+LFGD SA KFGSYW+KDGK VG FLE GSP+EN AIAK+AR QP S Sbjct: 363 VGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDL 422 Query: 220 LKAAGLQFAT 191 L G+ FA+ Sbjct: 423 LLKEGISFAS 432
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 85.5 bits (210), Expect = 3e-17 Identities = 39/69 (56%), Positives = 53/69 (76%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VGD++LFGD++ S+ KP+FG+YWV+ GK VG F+EGGS DEN A+AK+A+ +P A S E Sbjct: 363 VGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDE 422 Query: 220 LKAAGLQFA 194 L G+ FA Sbjct: 423 LVKQGISFA 431
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 48.9 bits (115), Expect = 3e-06 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = -1 Query: 397 GDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAA-SPGE 221 GD + FG+ + + FG+YWVK G VG FLEGG+ +E I+K + +P E Sbjct: 360 GDVVHFGEYEDGKS---FGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEE 416 Query: 220 LKAAGLQFA 194 L+ GL FA Sbjct: 417 LEREGLGFA 425
>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)| (MDAR fruit) (Ascorbate free radical reductase fruit) (AFR reductase fruit) (Fragments) Length = 166 Score = 48.1 bits (113), Expect = 5e-06 Identities = 29/61 (47%), Positives = 36/61 (59%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGE 221 VG+ +LF D FG+YW+K VGVFLEGG+PDE K+AR QPP S + Sbjct: 119 VGETVLFPD--------NFGTYWIK---VVGVFLEGGTPDE----YKVARVQPPVESLDQ 163 Query: 220 L 218 L Sbjct: 164 L 164
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = -1 Query: 400 VGDAILFGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQP 242 VG+ + G+ D PK ++W++ G+ GV +E GSP+E + KLAR QP Sbjct: 420 VGETVEVGNFD-----PKIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQP 467
>FOXL1_MOUSE (Q64731) Forkhead box protein L1 (Forkhead-related protein FKHL11)| (Transcription factor FKH-6) Length = 337 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -1 Query: 382 FGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAAGL 203 F +P GSYW D +C+ +F ENG + R PAA E K + Sbjct: 107 FVKVPREKGRPGKGSYWTLDPRCLDMF-------ENGNYRRRKRKPKPAAGSPEAKRTRV 159 Query: 202 QFATSKI 182 + S++ Sbjct: 160 EPPESEV 166
>SYL_BRUSU (Q8FYQ7) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 877 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -1 Query: 325 DGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAA 209 DGK V L+ G+P E G+I K+++ + P ++ A+ Sbjct: 607 DGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIAS 645
>SYL_BRUME (Q8YJ44) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 877 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -1 Query: 325 DGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELKAA 209 DGK V L+ G+P E G+I K+++ + P ++ A+ Sbjct: 607 DGKRVATMLDSGAPVEIGSIEKMSKSKKNVVDPDDIIAS 645
>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) Length = 784 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -1 Query: 376 DADHSSAKPKFGSYWVKDGKCVGVFLEGG-SPDENGAIAKLAR 251 D+ SSA PK+ + DGK +GV GG + N A+ + R Sbjct: 5 DSSSSSAYPKYLEHLSGDGKAIGVLTSGGDAQGMNAAVRAVVR 47
>U171_DROME (Q9VUB4) Hypothetical UPF0171 protein CG8783| Length = 610 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -3 Query: 191 QQDLNLGVLGVFVTWILDHHTYM--HTYI 111 QQ G+L V W+L HH M HTY+ Sbjct: 385 QQPARQGILAQMVIWMLQHHLLMQLHTYV 413
>PURL_METMA (Q8PYK1) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 716 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = -1 Query: 304 FLEGGSPD-ENGAIAKLARDQ-PPAASPGELKAAGLQFATSKI*TSVSWVYLLHGY*TTI 131 FL GG+P E + A + R++ +P +LKAA ++ +S S W+Y + + + Sbjct: 353 FLTGGAPTCEKPSEAPIHREEGKKPETPEDLKAAFMKVLSSHNIASKEWIYRQYDHEVQL 412 Query: 130 RTCI 119 RT + Sbjct: 413 RTVV 416
>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 539 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = +2 Query: 248 VPRELGDGAVLVRRPALQEHAHALAVLHPVRPELGLGGAVVGV 376 +P ELGD A+L++ L +L V LGLGGAV+GV Sbjct: 424 LPHELGDFAMLLQSGL---SFRRLLLLSLVSGALGLGGAVLGV 463
>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1| Length = 893 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 9/55 (16%) Frame = -1 Query: 376 DADHSSAKPKFGSYWVKDGKCVGVFLEGGS---------PDENGAIAKLARDQPP 239 D+ SA+P GS+W + + V+ GG+ P +G A+ A++ PP Sbjct: 709 DSSTPSARPPAGSWWDQLTQASRVYASGGTEGFPLLRWGPRRHGTTAEAAQEAPP 763
>FOXL1_HUMAN (Q12952) Forkhead box protein L1 (Forkhead-related protein FKHL11)| (Forkhead-related transcription factor 7) (FREAC-7) Length = 345 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/56 (28%), Positives = 21/56 (37%) Frame = -1 Query: 382 FGDADHSSAKPKFGSYWVKDGKCVGVFLEGGSPDENGAIAKLARDQPPAASPGELK 215 F +P GSYW D +C+ +F ENG + R P E K Sbjct: 107 FVKVPREKGRPGKGSYWTLDPRCLDMF-------ENGNYRRRKRKPKPGPGAPEAK 155
>CJ057_PONPY (Q5R9A6) Protein C10orf57 homolog| Length = 123 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 179 NLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHIL 51 NLG LG F +++DHH HT + Y + + + S+Y I+ Sbjct: 42 NLGPLGPFTQYLVDHH---HTLLCNGYWLAWLIHVGESLYAIV 81
>CJ057_HUMAN (Q8TBM7) Protein C10orf57| Length = 123 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 179 NLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHIL 51 NLG LG F +++DHH HT + Y + + + S+Y I+ Sbjct: 42 NLGPLGPFTQYLVDHH---HTLLCNGYWLAWLIHVGESLYAIV 81
>Y1629_SYNY3 (P74346) Hypothetical RNA pseudouridine synthase slr1629 (EC| 5.4.99.-) (RNA-uridine isomerase) (RNA pseudouridylate synthase) Length = 327 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 269 GAVLVRRPALQEHAHALAVLHPVRPEL 349 G+V V P HAH L+++HPV E+ Sbjct: 278 GSVNVNLPGQALHAHQLSLIHPVSGEI 304
>S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 535 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +2 Query: 248 VPRELGDGAVLVRRPALQEHAHALAVLHPVRPELGLGGAVVGV 376 +P ELGD A+L++ L +L V LGLGGA +GV Sbjct: 420 LPHELGDFAMLLQEGL---SFRKLLLLSLVSGALGLGGAALGV 459
>VGLH_SHV21 (P16492) Glycoprotein H precursor| Length = 717 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = -3 Query: 191 QQDLNLGVLGVFVTWILDHHTYMHTYIVADYAVQLVDAIVMSVYHILFLHI*VEASIKPT 12 Q+++NLG G F T + HHT + + L I++S I +I S KP Sbjct: 514 QKEINLGTNGFFQTLHMRHHTSLEILPIIKCIKSLSTDIILS---IPLKNITYVISTKPV 570 Query: 11 P 9 P Sbjct: 571 P 571
>PURL_METAC (Q8TIT6) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 715 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -1 Query: 304 FLEGGSP--DENGAIAKLARDQPPAASPGELKAAGLQFATSKI*TSVSWVYLLHGY*TTI 131 FL GG+P ++ L + +P +LK A L+ +S S W+Y + + + Sbjct: 353 FLTGGAPTCEKPSEAPTLREEGKKPETPEDLKVAFLKVLSSYNIASKEWIYRQYDHEVQL 412 Query: 130 RTCI 119 RT + Sbjct: 413 RTVV 416
>CEFD_STRCL (P18549) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 397 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 7/44 (15%) Frame = +2 Query: 257 ELGDGAVLVRRPALQEHAHAL-------AVLHPVRPELGLGGAV 367 ELG GA+ RR L +HA L +L P PEL GG V Sbjct: 293 ELGPGAIRARRRELTDHARRLLADRPGRTLLTPDSPELS-GGMV 335
>A4_DROME (P14599) Beta-amyloid-like protein precursor| Length = 887 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 282 SGDPPSRNTPTHLPSFTQYDPN 347 +G PPS PT P FT +DP+ Sbjct: 385 AGAPPSTAQPTSDPYFTHFDPH 406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,375,700 Number of Sequences: 219361 Number of extensions: 977268 Number of successful extensions: 2753 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2678 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2752 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)