ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469858.1| Oryza sativa (japonica cultivar-group), mRNA 133 6e-28
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 133 6e-28
3gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 133 6e-28
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
5dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
6dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
7gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced ... 125 1e-25
8gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced ... 125 1e-25
9dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
10gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 66 1e-07
11gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 66 1e-07
12dbj|AK099959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
13gb|AY106533.1| Zea mays PCO124223 mRNA sequence 44 0.41
14ref|NM_187006.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
15ref|XM_657557.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.6
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 42 1.6
19ref|XM_476355.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
20emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.5
21dbj|AB089954.1| Micromonospora griseorubida gene cluster for the... 40 6.5
22dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
23emb|Z36879.1|FPGDCPA F.pringlei gdcsPA gene for P-protein of the... 40 6.5
24emb|Z54239.1|FPGDCSPB F.pringlei gdcsPB gene 40 6.5
25gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cance... 40 6.5
26emb|AM181337.1| Euglena gracilis mRNA for photoactivated adenyla... 40 6.5

>ref|XM_469858.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1641

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 1196 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1137

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1136 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1077

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1076 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1017

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 1016 cgtggcttcct 1006



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                            
Query: 288      ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
                ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 31168638 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 31168697

                                                                            
Query: 348      ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
                 || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 31168698 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 31168757

                                                                            
Query: 408      atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
                |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 31168758 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 31168817

                           
Query: 468      cgtggcctcct 478
                |||||| ||||
Sbjct: 31168818 cgtggcttcct 31168828



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                          
Query: 293    agtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggtctggc 352
              |||| |||||||||||| |   |||||||||| |||| ||||| || ||| |||| || |
Sbjct: 255390 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 255449

                                                                          
Query: 353    gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 412
              | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 255450 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 255509

               
Query: 413    g 413
              |
Sbjct: 255510 g 255510



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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                         
Query: 288   ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
             ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 89279 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 89338

                                                                         
Query: 348   ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
              || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 89339 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 89398

                                                                         
Query: 408   atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
             |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 89399 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 89458

                        
Query: 468   cgtggcctcct 478
             |||||| ||||
Sbjct: 89459 cgtggcttcct 89469



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Plus

                                                                            
Query: 288      ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
                ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 31259161 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 31259220

                                                                            
Query: 348      ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
                 || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 31259221 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 31259280

                                                                            
Query: 408      atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
                |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 31259281 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 31259340

                           
Query: 468      cgtggcctcct 478
                |||||| ||||
Sbjct: 31259341 cgtggcttcct 31259351



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                          
Query: 293    agtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggtctggc 352
              |||| |||||||||||| |   |||||||||| |||| ||||| || ||| |||| || |
Sbjct: 255390 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 255449

                                                                          
Query: 353    gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 412
              | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 255450 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 255509

               
Query: 413    g 413
              |
Sbjct: 255510 g 255510



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>dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099H11, full
            insert sequence
          Length = 1532

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 1147 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1088

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1087 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1028

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1027 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 968

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 967  cgtggcttcct 957



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>dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050O18, full
            insert sequence
          Length = 1776

 Score =  133 bits (67), Expect = 6e-28
 Identities = 160/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  ||||||||||||||||||||| || ||| | ||
Sbjct: 1333 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacgacccttgt 1274

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1273 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1214

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1213 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1154

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 1153 cgtggcttcct 1143



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>gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase
            2C 2 K3 form (BIPP2C2) mRNA, complete cds, alternatively
            spliced
          Length = 1326

 Score =  125 bits (63), Expect = 1e-25
 Identities = 159/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  |||||||||||| |||||||| || ||| | ||
Sbjct: 1023 ggaggagtagatgtcgacgggggcgttggtgcagttgctactcgagtcgacgacccttgt 964

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 963  gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 904

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 903  atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 844

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 843  cgtggcttcct 833



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>gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase
            2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively
            spliced
          Length = 1526

 Score =  125 bits (63), Expect = 1e-25
 Identities = 159/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  |||||||||||| |||||||| || ||| | ||
Sbjct: 1125 ggaggagtagatgtcgacgggggcgttggtgcagttgctactcgagtcgacgacccttgt 1066

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1065 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1006

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1005 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 946

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 945  cgtggcttcct 935



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>dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D12, full
            insert sequence
          Length = 1635

 Score =  125 bits (63), Expect = 1e-25
 Identities = 159/191 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggaggagtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggt 347
            ||||||||| |||||||||||||||  ||||||||||||||||||||| ||  || | ||
Sbjct: 1250 ggaggagtagatgtcgacgggggcgttggtgcagttgctgctcgagtcgacggcccttgt 1191

                                                                        
Query: 348  ctggcgacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaa 407
             || || ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||||||
Sbjct: 1190 gtgacggcgaccgcggtggcggtcaaggtagacgacgatgacgctgatgtcgtcgtggaa 1131

                                                                        
Query: 408  atggcgtcgcacgccccgctctatcgtcctcaggtcgtgcacgctgacctctctcttctt 467
            |||||| | ||| |||  |||||||||| |||| ||  | | ||||||||| |||||| |
Sbjct: 1130 atggcgcctcactcccttctctatcgtcttcagatcacggaagctgacctccctcttcct 1071

                       
Query: 468  cgtggcctcct 478
            |||||| ||||
Sbjct: 1070 cgtggcttcct 1060



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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                         
Query: 293   agtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggtctggc 352
             |||| |||||||||||| |   |||||||||| |||| ||||| || ||| |||| || |
Sbjct: 92457 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 92516

                                                                         
Query: 353   gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 412
             | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 92517 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 92576

              
Query: 413   g 413
             |
Sbjct: 92577 g 92577



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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 293  agtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggtctggc 352
            |||| |||||||||||| |   |||||||||| |||| ||||| || ||| |||| || |
Sbjct: 7226 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 7167

                                                                        
Query: 353  gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 412
            | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 7166 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 7107

             
Query: 413  g 413
            |
Sbjct: 7106 g 7106



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>dbj|AK099959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126F07, full
            insert sequence
          Length = 1984

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 293  agtaaatgtcgacgggggcgccggtgcagttgctgctcgagtccaccaccttggtctggc 352
            |||| |||||||||||| |   |||||||||| |||| ||||| || ||| |||| || |
Sbjct: 1747 agtagatgtcgacggggccattggtgcagttgatgcttgagtcgacgaccctggtgtgac 1688

                                                                        
Query: 353  gacgaccccggtgccggtcgaggtacaccacgacgacactgatgtcgtcgtggaaatggc 412
            | ||||| ||||| ||||| ||||| || |||| ||  |||||||||||||||||| |||
Sbjct: 1687 ggcgaccacggtggcggtcaaggtagacgacgatgatgctgatgtcgtcgtggaaacggc 1628

             
Query: 413  g 413
            |
Sbjct: 1627 g 1627



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>gb|AY106533.1| Zea mays PCO124223 mRNA sequence
          Length = 2059

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 369  gtcgaggtacaccacgacgacactgatgtcgtcgtggaaatg 410
            ||||||| |||||||||||||  | || ||||||||||||||
Sbjct: 1507 gtcgaggaacaccacgacgacggttatatcgtcgtggaaatg 1466



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>ref|NM_187006.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 cgacgggggcgccggtgcagt 322
           |||||||||||||||||||||
Sbjct: 76  cgacgggggcgccggtgcagt 56



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>ref|XM_657557.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5045.2), mRNA
          Length = 2751

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 290  aggagtaaatgtcgacggggg 310
            |||||||||||||||||||||
Sbjct: 1813 aggagtaaatgtcgacggggg 1793



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 302      cgacgggggcgccggtgcagt 322
                |||||||||||||||||||||
Sbjct: 23715389 cgacgggggcgccggtgcagt 23715409



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tctgcaaccctaccaccgtt 180
              ||||||||||||||||||||
Sbjct: 112546 tctgcaaccctaccaccgtt 112565



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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   cgacgggggcgccggtgcagt 322
             |||||||||||||||||||||
Sbjct: 60003 cgacgggggcgccggtgcagt 60023



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>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    ctggacggagctggaggagga 293
              |||||||||||||||||||||
Sbjct: 125110 ctggacggagctggaggagga 125090



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>ref|XM_476355.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 tctgcaaccctaccaccgtt 180
           ||||||||||||||||||||
Sbjct: 257 tctgcaaccctaccaccgtt 238



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>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24
          Length = 306550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    cctgagcttctgcggccctt 225
              ||||||||||||||||||||
Sbjct: 216419 cctgagcttctgcggccctt 216400



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>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide
             mycinamicin, partial and comeplete cds
          Length = 58343

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   cgaccccggtgccggtcgag 374
             ||||||||||||||||||||
Sbjct: 48111 cgaccccggtgccggtcgag 48092



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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tctgcaaccctaccaccgtt 180
              ||||||||||||||||||||
Sbjct: 111845 tctgcaaccctaccaccgtt 111864



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>emb|Z36879.1|FPGDCPA F.pringlei gdcsPA gene for P-protein of the glycine cleavage system
          Length = 8496

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  caccatgatcatatatatag 205
            ||||||||||||||||||||
Sbjct: 6353 caccatgatcatatatatag 6334



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>emb|Z54239.1|FPGDCSPB F.pringlei gdcsPB gene
          Length = 10187

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  caccatgatcatatatatag 205
            ||||||||||||||||||||
Sbjct: 7164 caccatgatcatatatatag 7145



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>gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203926

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    ccaccatgatcatatatata 204
              ||||||||||||||||||||
Sbjct: 136064 ccaccatgatcatatatata 136045



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>emb|AM181337.1| Euglena gracilis mRNA for photoactivated adenylate cyclase-like
            protein, alpha subunit (pacA gene), strain ST-
          Length = 3060

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  ggcgccggtgcagttgctgc 328
            ||||||||||||||||||||
Sbjct: 2659 ggcgccggtgcagttgctgc 2640


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,998,747
Number of Sequences: 3902068
Number of extensions: 3998747
Number of successful extensions: 122298
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122071
Number of HSP's gapped (non-prelim): 226
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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