Clone Name | rbart13b11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 40.1 bits (20), Expect = 0.92 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttttggacaaaagcacggagaat 83 |||||||||||||||| ||||||| Sbjct: 125372 tttttggacaaaagcaaggagaat 125395
>emb|AL355384.6| Human DNA sequence from clone RP11-626C11 on chromosome 10 Contains a CpG island, complete sequence Length = 159305 Score = 40.1 bits (20), Expect = 0.92 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ggggacatcaatcaactttt 62 |||||||||||||||||||| Sbjct: 23045 ggggacatcaatcaactttt 23064
>ref|XM_710738.1| Candida albicans SC5314 putative aquaporin water channel protein (CaO19_10368), mRNA Length = 822 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 6 gaaatcacaaccaattgcattggatca 32 ||||||| || |||||||||||||||| Sbjct: 248 gaaatcataatcaattgcattggatca 222
>ref|XM_710687.1| Candida albicans SC5314 putative aquaporin water channel protein (CaO19_2849), mRNA Length = 822 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 6 gaaatcacaaccaattgcattggatca 32 ||||||| || |||||||||||||||| Sbjct: 248 gaaatcataatcaattgcattggatca 222
>gb|AC024827.2| Caenorhabditis elegans cosmid Y55F3AR, complete sequence Length = 17122 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 tcaacttttttggacaaaa 72 ||||||||||||||||||| Sbjct: 11682 tcaacttttttggacaaaa 11664
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ttgcattggatcaagtcga 38 ||||||||||||||||||| Sbjct: 376678 ttgcattggatcaagtcga 376660
>gb|AC148527.20| Medicago truncatula clone mth2-49g13, complete sequence Length = 107439 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 catcaatcaacttttttgg 66 ||||||||||||||||||| Sbjct: 61097 catcaatcaacttttttgg 61115
>emb|BX537152.15| Zebrafish DNA sequence from clone DKEY-61N7 in linkage group 14, complete sequence Length = 243729 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 acatcaatcaacttttttg 65 ||||||||||||||||||| Sbjct: 175677 acatcaatcaacttttttg 175659
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 caacttttttggacaaaag 73 ||||||||||||||||||| Sbjct: 82834 caacttttttggacaaaag 82852
>emb|AL928691.7| Zebrafish DNA sequence from clone CH211-51H20 in linkage group 14, complete sequence Length = 167320 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 acatcaatcaacttttttg 65 ||||||||||||||||||| Sbjct: 144430 acatcaatcaacttttttg 144448
>emb|AL928662.5| Mouse DNA sequence from clone RP23-379M5 on chromosome 2, complete sequence Length = 116419 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 acttttttggacaaaagca 75 ||||||||||||||||||| Sbjct: 99789 acttttttggacaaaagca 99807 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 603,854 Number of Sequences: 3902068 Number of extensions: 603854 Number of successful extensions: 42689 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42665 Number of HSP's gapped (non-prelim): 24 length of query: 86 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 65 effective length of database: 17,151,101,840 effective search space: 1114821619600 effective search space used: 1114821619600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)