ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart13b09 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 111 bits (278), Expect = 8e-25 Identities = 49/52 (94%), Positives = 51/52 (98%) Frame = -2 Query: 455 ADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 300 ADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 253 ADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 60.1 bits (144), Expect = 3e-09 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -2 Query: 422 KNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 300 K +YY + P QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 45.1 bits (105), Expect = 9e-05 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = -2 Query: 434 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 321 W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 250 WMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 45.1 bits (105), Expect = 9e-05 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = -2 Query: 425 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 P NV S + PV ++ YGG+MLW +Y+D Q+ YSS IK Sbjct: 259 PANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -2 Query: 425 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 PK V S V P + YGG+MLW+R FD Q YSS I+ Sbjct: 252 PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 38.9 bits (89), Expect = 0.006 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -2 Query: 404 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 V P + YGG+M+WDR+ D Q+ YS+ IK Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 38.1 bits (87), Expect = 0.011 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 434 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 312 +V P + + P +K YGG+MLW +++D + YSS I Sbjct: 255 YVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 37.4 bits (85), Expect = 0.018 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 434 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 312 ++ P + + P +K YGG+MLW +++D + YSS I Sbjct: 258 YIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 37.0 bits (84), Expect = 0.024 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 404 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 312 V P + YGG+MLWDR+ D Q+ YS I Sbjct: 264 VLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 33.1 bits (74), Expect = 0.34 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -2 Query: 425 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 P +V S V P + NYGG+MLW + FD YS IK Sbjct: 251 PADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 33.1 bits (74), Expect = 0.34 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 425 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 P +V S V P+ YGG+MLW +++D YSS IK Sbjct: 251 PSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = -2 Query: 434 WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 306 ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 263 YIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 404 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 309 V P + YGG+MLW + +D + YSS IK Sbjct: 261 VLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +2 Query: 347 TGPRA*CRRSCPSSATPARRCSRRSWGVPTGRT 445 TGPRA C R SS PARR R PT T Sbjct: 968 TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,030,922 Number of Sequences: 219361 Number of extensions: 871414 Number of successful extensions: 1923 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1921 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
