ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
2gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
3gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
6gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 64 5e-07
7gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
8dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
9ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
11dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
12gb|AY107519.1| Zea mays PCO078033 mRNA sequence 46 0.11
13gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, comp... 42 1.7
14gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 42 1.7
15ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related prote... 42 1.7
16ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predi... 42 1.7
17gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 1.7
18dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
19gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequ... 42 1.7
20emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.7
21gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosom... 40 6.8
22ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (pro... 40 6.8
23emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chro... 40 6.8
24ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.8
25gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 40 6.8
26dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RI... 40 6.8
27gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4... 40 6.8
28emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in ... 40 6.8
29gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Ca... 40 6.8
30gb|AF486627.1| Mus musculus experimental autoimmune prostatitis ... 40 6.8
31dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
32dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
33dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.8
34gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, comple... 40 6.8
35ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm... 40 6.8
36emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chrom... 40 6.8
37emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chro... 40 6.8
38emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chro... 40 6.8 
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 273   atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 332
             ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 45028 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 44969

                    
Query: 333   agccagc 339
             | |||||
Sbjct: 44968 atccagc 44962
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 273   atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 332
             ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 50747 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 50806

                    
Query: 333   agccagc 339
             | |||||
Sbjct: 50807 atccagc 50813
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 131/163 (80%)
 Strand = Plus / Plus

                                                                          
Query: 272    tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
              ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 140244 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 140303

                                                                          
Query: 332    aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 391
              ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 140304 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 140363

                                                         
Query: 392    atcaccagcatgagcatatccatgaggtgctgggtttccagca 434
              | ||||| |||   || |||||||||| |||||| ||| ||||
Sbjct: 140364 accaccatcatagccacatccatgaggagctgggcttctagca 140406



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                          
Query: 276    gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 335
              ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 138362 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 138420

               
Query: 336    c 336
              |
Sbjct: 138421 c 138421



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 275    ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 325
              ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 115956 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 116006



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 275   ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 334
             ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 80889 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 80948

               
Query: 335   cc 336
             ||
Sbjct: 80949 cc 80950
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 131/163 (80%)
 Strand = Plus / Plus

                                                                            
Query: 272      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
                ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 11353886 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11353945

                                                                            
Query: 332      aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 391
                ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 11353946 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 11354005

                                                           
Query: 392      atcaccagcatgagcatatccatgaggtgctgggtttccagca 434
                | ||||| |||   || |||||||||| |||||| ||| ||||
Sbjct: 11354006 accaccatcatagccacatccatgaggagctgggcttctagca 11354048



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 273     atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 332
               ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 7137527 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 7137586

                      
Query: 333     agccagc 339
               | |||||
Sbjct: 7137587 atccagc 7137593



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                            
Query: 276      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 335
                ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 11352004 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 11352062

                 
Query: 336      c 336
                |
Sbjct: 11352063 c 11352063



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 276      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 333
                |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11549315 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 11549372



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 275      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 325
                ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 11329598 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 11329648



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                            
Query: 275      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 334
                ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 11294531 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 11294590

                  
Query: 335      cc 336
                ||
Sbjct: 11294591 cc 11294592



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 278      tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 337
                |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 11485504 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 11485445

                                 
Query: 338      gccttggtgaagatctc 354
                || || |||||||||||
Sbjct: 11485444 gcattagtgaagatctc 11485428



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 272      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
                |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 11437238 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 11437297

                     
Query: 332      aagcc 336
                |||||
Sbjct: 11437298 aagcc 11437302



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 294      ctcgagctcccagcttcttgacaatcttatag 325
                |||||||||| ||| |||| ||||||||||||
Sbjct: 11490647 ctcgagctccaagcatcttcacaatcttatag 11490678
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 131/163 (80%)
 Strand = Plus / Plus

                                                                            
Query: 272      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
                ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 11433075 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11433134

                                                                            
Query: 332      aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 391
                ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 11433135 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 11433194

                                                           
Query: 392      atcaccagcatgagcatatccatgaggtgctgggtttccagca 434
                | ||||| |||   || |||||||||| |||||| ||| ||||
Sbjct: 11433195 accaccatcatagccacatccatgaggagctgggcttctagca 11433237



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 273     atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 332
               ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 7203498 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 7203557

                      
Query: 333     agccagc 339
               | |||||
Sbjct: 7203558 atccagc 7203564



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                            
Query: 276      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 335
                ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 11431193 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 11431251

                 
Query: 336      c 336
                |
Sbjct: 11431252 c 11431252



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 276      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 333
                |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11628504 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 11628561



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 275      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 325
                ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 11408787 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 11408837



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                            
Query: 275      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 334
                ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 11373720 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 11373779

                  
Query: 335      cc 336
                ||
Sbjct: 11373780 cc 11373781



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 278      tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 337
                |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 11564693 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 11564634

                                 
Query: 338      gccttggtgaagatctc 354
                || || |||||||||||
Sbjct: 11564633 gcattagtgaagatctc 11564617



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 272      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
                |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 11516427 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 11516486

                     
Query: 332      aagcc 336
                |||||
Sbjct: 11516487 aagcc 11516491



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 294      ctcgagctcccagcttcttgacaatcttatag 325
                |||||||||| ||| |||| ||||||||||||
Sbjct: 11569836 ctcgagctccaagcatcttcacaatcttatag 11569867
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>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 266 caaccttatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 325
           |||||||||||||||||||| |||||| |||||   || || ||||||||||||||||||
Sbjct: 517 caaccttatggatagacctcgatgacacctcgatggccaagtttcttgacaatcttatag 458



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 449 gatccaagcacaatgtctatgacgatgactttccctcc 486
           ||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 334 gatccaagcactatgtctatgatgatcacttttcctcc 297
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 276   gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 333
             |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 64473 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 64416



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                          
Query: 278    tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 337
              |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 128284 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 128343

                               
Query: 338    gccttggtgaagatctc 354
              || || |||||||||||
Sbjct: 128344 gcattagtgaagatctc 128360



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 294    ctcgagctcccagcttcttgacaatcttatag 325
              |||||||||| ||| |||| ||||||||||||
Sbjct: 123141 ctcgagctccaagcatcttcacaatcttatag 123110
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
            insert sequence
          Length = 1262

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 275  ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 325
            ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 1167 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 1117
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>ref|XM_477999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1083

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 449 gatccaagcacaatgtctatgacgatgactttccctcctgcttc 492
           ||||||| |||||  |||||||| ||||| ||||||||||||||
Sbjct: 902 gatccaaccacaacatctatgacaatgaccttccctcctgcttc 859
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 449      gatccaagcacaatgtctatgacgatgactttccctcctgcttc 492
                ||||||| |||||  |||||||| ||||| ||||||||||||||
Sbjct: 16261734 gatccaaccacaacatctatgacaatgaccttccctcctgcttc 16261777
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 449   gatccaagcacaatgtctatgacgatgactttccctcctgcttc 492
             ||||||| |||||  |||||||| ||||| ||||||||||||||
Sbjct: 82172 gatccaaccacaacatctatgacaatgaccttccctcctgcttc 82215
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>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 273  atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 332
            |||| |||||||| |||||| | |||||||| |  |||||||||| ||| ||| |   ||
Sbjct: 1107 atgggtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtcggaga 1048

                               
Query: 333  agccagccttggtgaagat 351
            ||||||||||||| |||||
Sbjct: 1047 agccagccttggtaaagat 1029
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>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence
          Length = 177788

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    agagtgagcacacacaacaat 227
              |||||||||||||||||||||
Sbjct: 156171 agagtgagcacacacaacaat 156151
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 272   tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 331
             |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 62299 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 62240

                  
Query: 332   aagcc 336
             |||||
Sbjct: 62239 aagcc 62235



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 278   tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 337
             |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 14033 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 14092

                              
Query: 338   gccttggtgaagatctc 354
             || || |||||||||||
Sbjct: 14093 gcattagtgaagatctc 14109



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 294  ctcgagctcccagcttcttgacaatcttatag 325
            |||||||||| ||| |||| ||||||||||||
Sbjct: 8890 ctcgagctccaagcatcttcacaatcttatag 8859
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>ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related protein ArpA (Afu4g13390)
           partial mRNA
          Length = 1146

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 357 tccagtccttctcttcccgct 377
           |||||||||||||||||||||
Sbjct: 700 tccagtccttctcttcccgct 680
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>ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predicted mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 341 ttggtgaagatctcgttccagtccttctc 369
           ||||||| |||| ||||||||||||||||
Sbjct: 479 ttggtgatgatcacgttccagtccttctc 451
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>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    agagtgagcacacacaacaat 227
              |||||||||||||||||||||
Sbjct: 174551 agagtgagcacacacaacaat 174571
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
            insert sequence
          Length = 1300

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 278  tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 337
            |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 1184 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 1125

                             
Query: 338  gccttggtgaagatctc 354
            || || |||||||||||
Sbjct: 1124 gcattagtgaagatctc 1108
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>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 231   caacatatatgcaagcatatattactttg 259
             ||||| ||||||||||||| |||||||||
Sbjct: 89651 caacacatatgcaagcataaattactttg 89623
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 341    ttggtgaagatctcgttccagtccttctc 369
              ||||||| |||| ||||||||||||||||
Sbjct: 668163 ttggtgatgatcacgttccagtccttctc 668191
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>gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosome 9, complete
            sequence
          Length = 206805

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gcctctcgtcatcaccagca 401
            ||||||||||||||||||||
Sbjct: 5546 gcctctcgtcatcaccagca 5565
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>ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 5470

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gcctctcgtcatcaccagca 401
            ||||||||||||||||||||
Sbjct: 1479 gcctctcgtcatcaccagca 1498
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>emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chromosome X, complete
             sequence
          Length = 112366

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ctgcatactatctttttcca 92
             ||||||||||||||||||||
Sbjct: 90051 ctgcatactatctttttcca 90032
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>ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus similar to HBS1-like protein
            (LOC591684), partial mRNA
          Length = 3640

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  gctcccagcttcttgacaat 318
            ||||||||||||||||||||
Sbjct: 3428 gctcccagcttcttgacaat 3409
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    tagaatatgaaaagcagtctaact 74
             |||||||||| |||||||||||||
Sbjct: 57275 tagaatatgataagcagtctaact 57298
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>dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530008N10 product:similar to
            DORSAL PROSTATE PROTEIN-GLUTAMINE
            GAMMA-GLUTAMYLTRANSFERASE (EC 2.3.2.13) (DORSAL PROSTATE
            TRANSGLUTAMINASE) (DORSAL PROTEIN 1) (DP1) [Rattus
            norvegicus], full insert sequence
          Length = 2768

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gcctctcgtcatcaccagca 401
            ||||||||||||||||||||
Sbjct: 1831 gcctctcgtcatcaccagca 1850
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>gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4, complete sequence
          Length = 171745

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    acatatatgcaagcatatat 252
              ||||||||||||||||||||
Sbjct: 144261 acatatatgcaagcatatat 144280
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>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete
              sequence
          Length = 272840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    acaatccacaacatatatgc 242
              ||||||||||||||||||||
Sbjct: 195158 acaatccacaacatatatgc 195139
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>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160095

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   atatatgcaagcatatatta 254
             ||||||||||||||||||||
Sbjct: 70170 atatatgcaagcatatatta 70151
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>gb|AF486627.1| Mus musculus experimental autoimmune prostatitis antigen 1 (Eapa1)
            mRNA, complete cds
          Length = 2303

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gcctctcgtcatcaccagca 401
            ||||||||||||||||||||
Sbjct: 1829 gcctctcgtcatcaccagca 1848
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 294  ctcgagctcccagcttcttgacaatcttatag 325
            |||||||||| ||| |||| ||||||||||||
Sbjct: 1134 ctcgagctccaagcatcttcacaatcttatag 1103
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 294  ctcgagctcccagcttcttgacaatcttatag 325
            |||||||||| ||| |||| ||||||||||||
Sbjct: 1139 ctcgagctccaagcatcttcacaatcttatag 1108
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>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
             sequence
          Length = 177433

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   agccactgaagccagccttg 343
             ||||||||||||||||||||
Sbjct: 58859 agccactgaagccagccttg 58840
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>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    gcctctcgtcatcaccagca 401
              ||||||||||||||||||||
Sbjct: 127119 gcctctcgtcatcaccagca 127138
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>ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 2768

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  gcctctcgtcatcaccagca 401
            ||||||||||||||||||||
Sbjct: 1831 gcctctcgtcatcaccagca 1850
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>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete
              sequence
          Length = 164443

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    acatatatgcaagcatatat 252
              ||||||||||||||||||||
Sbjct: 129278 acatatatgcaagcatatat 129297
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>emb|AL805949.4| Mouse DNA sequence from clone RP23-424K9 on chromosome 4, complete
             sequence
          Length = 193704

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   atatatgcaagcatatatta 254
             ||||||||||||||||||||
Sbjct: 56680 atatatgcaagcatatatta 56699
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>emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chromosome 2, complete
             sequence
          Length = 98571

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   ccactgaagccagccttggtgaag 349
             ||||||||||||| ||||||||||
Sbjct: 32627 ccactgaagccagacttggtgaag 32650


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,656,439
Number of Sequences: 3902068
Number of extensions: 4656439
Number of successful extensions: 106622
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106328
Number of HSP's gapped (non-prelim): 288
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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