Clone Name | rbart13b03 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 140 bits (352), Expect = 3e-33 Identities = 67/114 (58%), Positives = 83/114 (72%), Gaps = 4/114 (3%) Frame = -1 Query: 518 PVQLTATPRCGYPDR-HVGRALATGLVGRIFVRFYD-DADCAAN--WQRQWDKWTAAYPS 351 P+ LTAT RCGYP HVGRALATG+ R+ VR Y+ D C N W+ WDKWTAAYP+ Sbjct: 185 PLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPA 244 Query: 350 AQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 245 TRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 126 bits (316), Expect = 4e-29 Identities = 64/129 (49%), Positives = 81/129 (62%), Gaps = 8/129 (6%) Frame = -1 Query: 533 FRGRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANW------QRQWDK 372 +R RTPV+LTAT RC +PD + +AL T L RI VRFYDDA C+ N QW+K Sbjct: 176 YRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNK 235 Query: 371 WTAAYPSAQIYLGLPASE--QKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198 WTA YP + +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Sbjct: 236 WTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTG 295 Query: 197 YSSYAIQWA 171 Y WA Sbjct: 296 YGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 118 bits (295), Expect = 1e-26 Identities = 53/115 (46%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = -1 Query: 533 FRGRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYP 354 +RGR V LTAT RC YPD + +ALATG+ RI VR + D C + + W+KW AA+P Sbjct: 173 YRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQCTMSPRYSWEKWAAAFP 232 Query: 353 SAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 +++Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 233 GSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 93.6 bits (231), Expect = 3e-19 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 8/117 (6%) Frame = -1 Query: 515 VQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYP 354 V LTA P+C +PDR++G AL TGL ++V+FY++ C N W++WT + Sbjct: 177 VYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSIN 236 Query: 353 SAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + +I+LGLPA+ + GYV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 237 AGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 87.0 bits (214), Expect = 3e-17 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%) Frame = -1 Query: 530 RGRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC------AANWQRQWDKW 369 RGR V LTA P+C +PD+ G AL TGL ++V+FY++ C N W++W Sbjct: 175 RGRK-VYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRW 233 Query: 368 TAAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNY 195 T++ S ++GLPAS G++ L ++ V++++ YGGVM+W +Y D ++ Y Sbjct: 234 TSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGY 293 Query: 194 SS 189 SS Sbjct: 294 SS 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 85.9 bits (211), Expect = 6e-17 Identities = 42/114 (36%), Positives = 74/114 (64%), Gaps = 7/114 (6%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTAAYPSAQ 345 LTA P+C +PD+ + AL TGL ++V+FY++ +C + N++R+W++WT + P+ + Sbjct: 176 LTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWT-SIPAKK 234 Query: 344 IYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 +Y+GLPA++ GY+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 235 LYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 84.3 bits (207), Expect = 2e-16 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 8/122 (6%) Frame = -1 Query: 530 RGRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCA------ANWQRQWDKW 369 RGR + LT P+C +PDR +G AL T ++++FY++ C+ N W+KW Sbjct: 176 RGRK-IYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKW 234 Query: 368 TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNY 195 T + + + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D + Y Sbjct: 235 TTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGY 294 Query: 194 SS 189 SS Sbjct: 295 SS 296
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 82.0 bits (201), Expect = 9e-16 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 9/118 (7%) Frame = -1 Query: 515 VQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYP 354 V L+A P+C YPD H+ A+ TGL ++V+FY++ C N W++WT++ Sbjct: 171 VYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSS-Q 229 Query: 353 SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + Q++LG+PAS+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 230 AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 79.7 bits (195), Expect = 5e-15 Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 8/110 (7%) Frame = -1 Query: 515 VQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDD-----ADCAANWQRQWDKWTAAYPS 351 V L+A P+C PD H+ A+ TGL ++V+FY++ AD A N W++WT A+P+ Sbjct: 172 VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWT-AFPT 230 Query: 350 AQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210 +++Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 231 SKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 76.3 bits (186), Expect = 5e-14 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 8/118 (6%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC------AANWQRQWDKWTAAYPSA 348 LTA P+C PD H+ A+ TGL ++V+FY++ C + W++WT++ + Sbjct: 179 LTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTSS-QAK 237 Query: 347 QIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180 Q++LG+PAS G++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 76.3 bits (186), Expect = 5e-14 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 7/120 (5%) Frame = -1 Query: 527 GRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC-----AANWQRQWDKWTA 363 G+ V L+A P+C PD + A+ATGL ++V+FY++ C A N W++WT Sbjct: 171 GQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTT 230 Query: 362 AYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + QI+LGLPAS G++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 231 VQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 74.7 bits (182), Expect = 1e-13 Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 8/123 (6%) Frame = -1 Query: 533 FRGRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC------AANWQRQWDK 372 F + V LTA P+C +PD + AL+TGL ++V+FY++ C A N + W++ Sbjct: 166 FSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQ 225 Query: 371 WTAAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198 W A + +I+LGLPA++ G++ L V+ ++ + YGGVM+W ++ D Sbjct: 226 WN-AIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NG 282 Query: 197 YSS 189 YSS Sbjct: 283 YSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 65.5 bits (158), Expect = 9e-11 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 12/124 (9%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADC---AANWQR---QWDKWT-AAYP- 354 L+A P C PD ++ A+ T IFVRFY+D C N QR W WT + YP Sbjct: 184 LSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPR 243 Query: 353 SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVV-QKAANYGGVMVWERYEDKRTNYSSY 186 ++L LPAS+ GY+ P L V+ + Y G+ +W R DK T YS+ Sbjct: 244 DKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTN 303 Query: 185 AIQW 174 I++ Sbjct: 304 IIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 59.7 bits (143), Expect = 5e-09 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 8/110 (7%) Frame = -1 Query: 527 GRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKW------T 366 G L+A P+C YPD VG L + F++FY++ C+ + Q WD W Sbjct: 178 GTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNNY-CSVSGQFNWDTWLTYAQTV 236 Query: 365 AAYPSAQIYLGLP--ASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 + + +++LGLP AS GY+ +L I + ++++GG+ +W+ Sbjct: 237 SPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Frame = -1 Query: 527 GRTPVQLTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKWT--AAYP 354 G L+A P+C YPD VG ++ + F++FY++ C+ N Q W+ W+ A Sbjct: 168 GTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNNY-CSLNQQFNWNSWSNYARGK 226 Query: 353 SAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 S ++YLGLP S G+V + V+ ++ +++GG+ +W+ Sbjct: 227 SIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKGDSSFGGISIWD 271
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 54.7 bits (130), Expect = 2e-07 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 5/101 (4%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYPSA-----Q 345 L+A P+C YPD +G L+ + F++FY++ C+ N Q +D W+ SA + Sbjct: 181 LSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNNY-CSINGQFNYDTWSKFADSAPNKNIK 239 Query: 344 IYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 +++G+PA+ GYV L I+ ++ +++ GV +W+ Sbjct: 240 LFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 52.4 bits (124), Expect = 8e-07 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 20/116 (17%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQW-----------DKWT- 366 ++A P+C PD+++ A++ IF++FY++ C+A ++W D W Sbjct: 203 ISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSA---KRWVTNPKSVTYTVDDWVK 259 Query: 365 ----AAYPSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 222 + P A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 260 YIRKSGNPLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 49.3 bits (116), Expect = 7e-06 Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Frame = -1 Query: 509 LTATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKW------TAAYPSA 348 L A P+C YPD VG L + +F++FY++ + WD W + + Sbjct: 185 LGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNNYCNLGSSSFNWDTWLNYAETDSPNKNI 244 Query: 347 QIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 ++++G+PAS + GY P + + + + +GG+ +W+ Sbjct: 245 KLFVGVPASSRAAGSGYNDPSAVSQYLTSDILNSKYFGGISMWD 288
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 45.8 bits (107), Expect = 7e-05 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 9/103 (8%) Frame = -1 Query: 503 ATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQ 345 A P+C +PD +G L + + V+FY++ C+A WD W T+ + + Sbjct: 192 AAPQCPFPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 344 IYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 I +P S GYV L V + K ++YGGV VW+ Sbjct: 251 IMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 9/103 (8%) Frame = -1 Query: 503 ATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAANWQR----QWDKW---TAAYPSAQ 345 A P+C +PD +G L + + V+FY++ C+A WD W T+ + + Sbjct: 192 AAPQCPFPDAILGSVLNSASFDYVNVQFYNNY-CSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 344 IYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 I +P S GYV L V + + ++YGGV VW+ Sbjct: 251 IMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 36.6 bits (83), Expect = 0.045 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%) Frame = -1 Query: 503 ATPRCGYPDRHVGRALATGLVGRIFVRFYDDADCAAN--------WQRQWDKWTAAYPSA 348 A P+C +PD +G + + + V+FY++ A+ W W K + + Sbjct: 188 AAPQCPFPDAILGSVIDAVGLDFVNVQFYNNVCSVASGSSFNFDVW-NDWAKNKSPNKNI 246 Query: 347 QIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 ++ L +P S GY L V V+ + +++GGV VW+ Sbjct: 247 KVMLTVPGSSTAAGSGYASIAELGPIVSSVISQYSSFGGVSVWD 290
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.4 bits (67), Expect = 3.2 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -3 Query: 432 LCQVXXXXXXXRQLAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGG 262 LC L +A + GG + G + R A R+ RSS P RR GG Sbjct: 984 LCTDSLPETDDSLLCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGG 1042 Query: 261 AEGGQLWRGHGLGTLRGQADKLQQL 187 A GG RG G L+ A ++ L Sbjct: 1043 AHGG---RGRGRARLKSTASSIETL 1064
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 4.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>GPI11_GIBZE (Q4HXT5) Glycosylphosphatidylinositol anchor biosynthesis protein| 11 Length = 255 Score = 29.6 bits (65), Expect = 5.5 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%) Frame = -1 Query: 530 RGRTPVQLTATPRCGYP-DRHVGRALATGLVGRIFVRFYDDADCAANWQRQWDKWTAAYP 354 RG PV L A P D+ G G +G + + +W R+W KW Sbjct: 169 RGSDPVPLQAVVGVSAPFDQTFG-----GFLGTVVGAWLGSVPIPLDWDREWQKWPVTI- 222 Query: 353 SAQIYLGLPASEQKVGYV 300 YLG Q +G V Sbjct: 223 VVGAYLGYIVGSQLLGTV 240
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 9.3 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 392 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 285 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>FLGE_CAUCR (P35806) Flagellar hook protein flgE| Length = 591 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 311 PSALTPAARGRSAPTDTPPSTCPTASASW 397 P+A+T + G APT TPP+ P +W Sbjct: 404 PTAITIKSSGYIAPTVTPPAVQPPTPPTW 432
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 9.3 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,849,356 Number of Sequences: 219361 Number of extensions: 1237623 Number of successful extensions: 4536 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4501 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)