ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart13b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 944 0.0
2ref|XM_475074.1| Oryza sativa (japonica cultivar-group), predic... 226 5e-56
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
4dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
5gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 226 5e-56
6gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence 68 3e-08
7ref|XM_479982.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.007
9gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.007
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
12dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
13dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AK073888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
15dbj|AK061425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
16gb|AF097724.1|AF097724 Oryza sativa 33-kDa secretory protein mRN... 50 0.007
17gb|AF093570.1|AF093570 Oryza sativa 33 kDa secretory protein mRN... 50 0.007
18gb|AF090872.1|AF090872 Oryza sativa 33 kDa secretory protein mRN... 50 0.007
19gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
20gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
22dbj|AK072663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
23dbj|AK070487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
25gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA,... 44 0.42
26ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid re... 42 1.6
27gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.6
28gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
29emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
30emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 m... 42 1.6
31dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 1.6
32gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 42 1.6
33gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, co... 42 1.6
34ref|NM_187099.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
35ref|XM_476361.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
36ref|XM_506132.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.5
37gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA... 40 6.5
38ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), ... 40 6.5
39ref|XM_953256.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
40ref|XM_330414.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
41emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, comple... 40 6.5
42emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJ... 40 6.5
43emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.5
44emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 40 6.5
45emb|AJ132396.1|KPN132396 Klebsiella pneumoniae D partial gmhD, w... 40 6.5
46emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, co... 40 6.5
47gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, com... 40 6.5
48gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, ... 40 6.5
49ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA 40 6.5
50gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 6.5
51gb|AY823268.1| Klebsiella pneumoniae strain 52145 waa gene clust... 40 6.5
52ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, ... 40 6.5
53dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
55dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 6.5
57dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
58gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mR... 40 6.5
59dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
60dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.5
61dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
62dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
63emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor 40 6.5
64dbj|AK100796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
65dbj|AK100327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
66gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 6.5
67gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, co... 40 6.5
68gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
69emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5
70gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid recept... 40 6.5
71gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid r... 40 6.5 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full
            insert sequence
          Length = 1094

 Score =  944 bits (476), Expect = 0.0
 Identities = 479/480 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    acacaaacaaacacaaggcttggattcaaggctagctacgagctagccatacactaacaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 acacaaacaaacacaaggcttggattcaaggctagctacgagctagccatacactaacaa 1003

                                                                        
Query: 61   atggattcgccaccaccaccaggaccaggtacgcacaacgagctggagtgccctcgtaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atggattcgccaccaccaccaggaccaggtacgcacaacgagctggagtgccctcgtaga 943

                                                                        
Query: 121  tagcaccgtagttgactacacgtagtttgtactccacaaacaaatacatcacgcgttcaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942  tagcaccgtagttgactacacgtagtttgtactccacaaacaaatacatcacgcgttcaa 883

                                                                        
Query: 181  gacaatcttgtcgcactgtccgacctcgtcggccgacttgtcggcgccgtcgagcgggaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882  gacaatcttgtcgcactgtccgacctcgtcggccgacttgtcggcgccgtcgagcgggaa 823

                                                                        
Query: 241  gaagaaggggtacacctcgtagcgcgccatgcagctgctgtagatcacgcggcacccgcg 300
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 822  gaagaaggggtacacctcgtagcgcgccatgcagctgctgtagatctcgcggcacccgcg 763

                                                                        
Query: 301  ccggtaccggcagtagttgggcagctcggccacagcctgcgccacgcacagcccgcagtc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762  ccggtaccggcagtagttgggcagctcggccacagcctgcgccacgcacagcccgcagtc 703

                                                                        
Query: 361  ggccgccgtgatgtccctggtgcaccacccgagcccgtagatggtcgtcttggctccgcc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702  ggccgccgtgatgtccctggtgcaccacccgagcccgtagatggtcgtcttggctccgcc 643

                                                                        
Query: 421  accatcgctgccgagtcgcgtcgtgtccgtcgccaggcccttgttggcggcgtcgccggc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642  accatcgctgccgagtcgcgtcgtgtccgtcgccaggcccttgttggcggcgtcgccggc 583
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>ref|XM_475074.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  226 bits (114), Expect = 5e-56
 Identities = 165/182 (90%)
 Strand = Plus / Minus

                                                                       
Query: 225 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 284
           |||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| |
Sbjct: 754 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 695

                                                                       
Query: 285 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 344
            ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 694 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 635

                                                                       
Query: 345 cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 404
           |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 634 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 575

             
Query: 405 tc 406
           ||
Sbjct: 574 tc 573
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  226 bits (114), Expect = 5e-56
 Identities = 165/182 (90%)
 Strand = Plus / Plus

                                                                          
Query: 225    cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 284
              |||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| |
Sbjct: 659635 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 659694

                                                                          
Query: 285    tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 344
               ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 659695 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 659754

                                                                          
Query: 345    cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 404
              |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 659755 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 659814

                
Query: 405    tc 406
              ||
Sbjct: 659815 tc 659816
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>dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B11, full
           insert sequence
          Length = 1008

 Score =  226 bits (114), Expect = 5e-56
 Identities = 165/182 (90%)
 Strand = Plus / Minus

                                                                       
Query: 225 cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 284
           |||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| |
Sbjct: 793 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 734

                                                                       
Query: 285 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 344
            ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 733 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 674

                                                                       
Query: 345 cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 404
           |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 673 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 614

             
Query: 405 tc 406
           ||
Sbjct: 613 tc 612
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0041A22, complete sequence
          Length = 117919

 Score =  226 bits (114), Expect = 5e-56
 Identities = 165/182 (90%)
 Strand = Plus / Plus

                                                                        
Query: 225  cgccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtaga 284
            |||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| |
Sbjct: 4834 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 4893

                                                                        
Query: 285  tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 344
             ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 4894 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 4953

                                                                        
Query: 345  cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 404
            |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 4954 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 5013

              
Query: 405  tc 406
            ||
Sbjct: 5014 tc 5015
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>gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence
          Length = 943

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 226 gccgtcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 283
           |||| ||||||||||| |||||||||| | |||||||||| || ||||||||||||||
Sbjct: 197 gccggcgagcgggaagtagaaggggtagatctcgtagcgcaccctgcagctgctgtag 254
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>ref|XM_479982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1156

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 230 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
           ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 231     cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 283
               ||||||||||| ||||||| || | |||||||||| || ||||||| ||||||
Sbjct: 9393992 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9394044
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 231   cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 283
             ||||||||||| ||||||| || | |||||||||| || ||||||| ||||||
Sbjct: 91392 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 91444
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 230     tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
               ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 2057194 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 2057246
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 231     cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 283
               ||||||||||| ||||||| || | |||||||||| || ||||||| ||||||
Sbjct: 9392113 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9392165
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 230   tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
             ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 50724 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 50776
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 230    tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
              ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 182392 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 182444
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>dbj|AK073888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I11, full
           insert sequence
          Length = 1156

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 230 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
           ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
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>dbj|AK061425.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G05, full
           insert sequence
          Length = 1133

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 231 cgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgtag 283
           ||||||||||| ||||||| || | |||||||||| || ||||||| ||||||
Sbjct: 825 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 773
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>gb|AF097724.1|AF097724 Oryza sativa 33-kDa secretory protein mRNA, complete cds
          Length = 1179

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 230 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
           ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 814 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 762
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>gb|AF093570.1|AF093570 Oryza sativa 33 kDa secretory protein mRNA, complete cds
          Length = 1106

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 230 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
           ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 828 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 776
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>gb|AF090872.1|AF090872 Oryza sativa 33 kDa secretory protein mRNA, complete cds
          Length = 1025

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 230 tcgagcgggaagaagaaggggtacacctcgtagcgcgccatgcagctgctgta 282
           ||||| |||||| |||||||||| | |||||||||||||   |||||||||||
Sbjct: 824 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 772
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>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20,
              complete sequence
          Length = 127338

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 454    caggcccttgttggcggcgtcgccggc 480
              ||||||||||| |||||||||||||||
Sbjct: 110738 caggcccttgtcggcggcgtcgccggc 110712
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>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0030I09 map C83B, complete sequence
          Length = 123477

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 454  caggcccttgttggcggcgtcgccggc 480
            ||||||||||| |||||||||||||||
Sbjct: 6344 caggcccttgtcggcggcgtcgccggc 6318
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 454     caggcccttgttggcggcgtcgccggc 480
               ||||||||||| |||||||||||||||
Sbjct: 2616060 caggcccttgtcggcggcgtcgccggc 2616086
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>dbj|AK072663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P15, full
           insert sequence
          Length = 1279

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 454 caggcccttgttggcggcgtcgccggc 480
           ||||||||||| |||||||||||||||
Sbjct: 203 caggcccttgtcggcggcgtcgccggc 177
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>dbj|AK070487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E11, full
           insert sequence
          Length = 1642

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 454 caggcccttgttggcggcgtcgccggc 480
           ||||||||||| |||||||||||||||
Sbjct: 315 caggcccttgtcggcggcgtcgccggc 289
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 454     caggcccttgttggcggcgtcgccggc 480
               ||||||||||| |||||||||||||||
Sbjct: 2625091 caggcccttgtcggcggcgtcgccggc 2625117
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>gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA, complete cds
          Length = 1120

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 68  cgccaccaccaccaggaccagg 89
           ||||||||||||||||||||||
Sbjct: 810 cgccaccaccaccaggaccagg 789
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>ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid receptor, kappa 1;
            Opiate receptor, kappa-1 (LOC472761), mRNA
          Length = 2559

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   cgccaccaccaccaggaccag 88
            |||||||||||||||||||||
Sbjct: 2259 cgccaccaccaccaggaccag 2239
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     ccgtcgagcgggaagaagaag 247
               |||||||||||||||||||||
Sbjct: 2617991 ccgtcgagcgggaagaagaag 2618011
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     ccgtcgagcgggaagaagaag 247
               |||||||||||||||||||||
Sbjct: 3830329 ccgtcgagcgggaagaagaag 3830349
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     ccgtcgagcgggaagaagaag 247
               |||||||||||||||||||||
Sbjct: 3570676 ccgtcgagcgggaagaagaag 3570696
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>emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 map 22q22.3, complete
             sequence
          Length = 149587

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    atggattcgccaccaccacca 81
             |||||||||||||||||||||
Sbjct: 91235 atggattcgccaccaccacca 91215
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 174     cgttcaagacaatcttgtcgc 194
               |||||||||||||||||||||
Sbjct: 1884242 cgttcaagacaatcttgtcgc 1884262
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    gtcgagcgggaagaagaaggg 249
              |||||||||||||||||||||
Sbjct: 337203 gtcgagcgggaagaagaaggg 337183
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>gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1182

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  cgccaccaccaccaggaccag 88
           |||||||||||||||||||||
Sbjct: 856 cgccaccaccaccaggaccag 836
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>ref|NM_187099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 cgccgtcgagcgggaagaag 244
           ||||||||||||||||||||
Sbjct: 265 cgccgtcgagcgggaagaag 246
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>ref|XM_476361.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  cgcacagcccgcagtcggcc 364
            ||||||||||||||||||||
Sbjct: 1209 cgcacagcccgcagtcggcc 1228
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>ref|XM_506132.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.35 mRNA
          Length = 1642

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  cgcacagcccgcagtcggcc 364
            ||||||||||||||||||||
Sbjct: 1209 cgcacagcccgcagtcggcc 1228
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>gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA clone MGC:104656
            IMAGE:30531690), complete cds
          Length = 4943

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   gccaccaccaccaggaccag 88
            ||||||||||||||||||||
Sbjct: 1053 gccaccaccaccaggaccag 1034
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>ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), mRNA
          Length = 4959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   gccaccaccaccaggaccag 88
            ||||||||||||||||||||
Sbjct: 1077 gccaccaccaccaggaccag 1058
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>ref|XM_953256.1| Neurospora crassa OR74A hypothetical protein (NCU09765.1) partial
           mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 418 gccaccatcgctgccgagtc 437
           ||||||||||||||||||||
Sbjct: 256 gccaccatcgctgccgagtc 275
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>ref|XM_330414.1| Neurospora crassa OR74A hypothetical protein (NCU09765.1) partial
           mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 418 gccaccatcgctgccgagtc 437
           ||||||||||||||||||||
Sbjct: 256 gccaccatcgctgccgagtc 275
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>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence
          Length = 38779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ccaccaccaccaggaccagg 89
             ||||||||||||||||||||
Sbjct: 19675 ccaccaccaccaggaccagg 19656
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>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes)
          Length = 10622

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   accaccaccaggaccaggta 91
            ||||||||||||||||||||
Sbjct: 7564 accaccaccaggaccaggta 7545
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>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 457    gcccttgttggcggcgtcgccggc 480
              |||||||||||||||| |||||||
Sbjct: 193713 gcccttgttggcggcggcgccggc 193736
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>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     cgccaccaccaccaggacca 87
              ||||||||||||||||||||
Sbjct: 126352 cgccaccaccaccaggacca 126371
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>emb|AJ132396.1|KPN132396 Klebsiella pneumoniae D partial gmhD, waaF and waaC genes and
           partial ORFX, strain 889/50
          Length = 2928

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 agctcggccacagcctgcgc 342
           ||||||||||||||||||||
Sbjct: 696 agctcggccacagcctgcgc 715
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>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    ttgtactccacaaacaaata 166
              ||||||||||||||||||||
Sbjct: 107057 ttgtactccacaaacaaata 107076
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>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     gccaccaccaccaggaccag 88
              ||||||||||||||||||||
Sbjct: 110957 gccaccaccaccaggaccag 110976
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>gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, complete cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  gccaccaccaccaggaccag 88
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
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>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA
          Length = 4422

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   ccaccaccaccaggaccagg 89
            ||||||||||||||||||||
Sbjct: 1325 ccaccaccaccaggaccagg 1306
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ccaccaccaccaggaccagg 89
              ||||||||||||||||||||
Sbjct: 147511 ccaccaccaccaggaccagg 147530
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>gb|AY823268.1| Klebsiella pneumoniae strain 52145 waa gene cluster, partial sequence
          Length = 14397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  agctcggccacagcctgcgc 342
            ||||||||||||||||||||
Sbjct: 1301 agctcggccacagcctgcgc 1320
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>ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, complete cds
          Length = 2745

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  ccaccaccaccaggaccagg 89
           ||||||||||||||||||||
Sbjct: 286 ccaccaccaccaggaccagg 305
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      gtcgagcgggaagaagaagg 248
                ||||||||||||||||||||
Sbjct: 13469827 gtcgagcgggaagaagaagg 13469808
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      cgccgtcgagcgggaagaag 244
                ||||||||||||||||||||
Sbjct: 15383126 cgccgtcgagcgggaagaag 15383107



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    cgcacagcccgcagtcggcc 364
              ||||||||||||||||||||
Sbjct: 154315 cgcacagcccgcagtcggcc 154296
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      gtcgagcgggaagaagaagg 248
                ||||||||||||||||||||
Sbjct: 19810707 gtcgagcgggaagaagaagg 19810726
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>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ccaccaccaccaggaccagg 89
             ||||||||||||||||||||
Sbjct: 85991 ccaccaccaccaggaccagg 86010
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>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0047D12
          Length = 145981

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gtcgagcgggaagaagaagg 248
             ||||||||||||||||||||
Sbjct: 33665 gtcgagcgggaagaagaagg 33684
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>gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mRNA, complete cds,
            alternatively spliced
          Length = 1396

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   gccaccaccaccaggaccag 88
            ||||||||||||||||||||
Sbjct: 1036 gccaccaccaccaggaccag 1017
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   cgccgtcgagcgggaagaag 244
             ||||||||||||||||||||
Sbjct: 90125 cgccgtcgagcgggaagaag 90106
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     ctgtccgacctcgtcggccg 215
               ||||||||||||||||||||
Sbjct: 6086637 ctgtccgacctcgtcggccg 6086618
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     gtcggcgccgtcgagcggga 239
               ||||||||||||||||||||
Sbjct: 3192722 gtcggcgccgtcgagcggga 3192741
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    cgcacagcccgcagtcggcc 364
              ||||||||||||||||||||
Sbjct: 153614 cgcacagcccgcagtcggcc 153595
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>emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor
          Length = 1231

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  cgccaccaccaccaggacca 87
           ||||||||||||||||||||
Sbjct: 888 cgccaccaccaccaggacca 869
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>dbj|AK100796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F13, full
            insert sequence
          Length = 1641

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  cgcacagcccgcagtcggcc 364
            ||||||||||||||||||||
Sbjct: 1208 cgcacagcccgcagtcggcc 1227
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>dbj|AK100327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N22, full
            insert sequence
          Length = 1617

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  cgcacagcccgcagtcggcc 364
            ||||||||||||||||||||
Sbjct: 1208 cgcacagcccgcagtcggcc 1227
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ccaccaccaccaggaccagg 89
              ||||||||||||||||||||
Sbjct: 191757 ccaccaccaccaggaccagg 191776
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>gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  gccaccaccaccaggaccag 88
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      gtcgagcgggaagaagaagg 248
                ||||||||||||||||||||
Sbjct: 13424101 gtcgagcgggaagaagaagg 13424082
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>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 154442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gtcgagcgggaagaagaagg 248
              ||||||||||||||||||||
Sbjct: 115412 gtcgagcgggaagaagaagg 115431
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>gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid receptor mRNA, complete cds
          Length = 1733

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   gccaccaccaccaggaccag 88
            ||||||||||||||||||||
Sbjct: 1081 gccaccaccaccaggaccag 1062
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>gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid receptor (OPRK1) mRNA,
            complete cds
          Length = 1604

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   gccaccaccaccaggaccag 88
            ||||||||||||||||||||
Sbjct: 1219 gccaccaccaccaggaccag 1200


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,250,647
Number of Sequences: 3902068
Number of extensions: 4250647
Number of successful extensions: 86902
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85958
Number of HSP's gapped (non-prelim): 944
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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