Clone Information

BLAST Search Result

Clone Name	rbart13a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Co...	69	7e-12
2	7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) ...	66	4e-11
3	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	35	0.12
4	HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein...	34	0.15
5	RAD52_MOUSE (P43352) DNA repair protein RAD52 homolog	34	0.15
6	MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) ...	33	0.26
7	GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4) (Endo...	33	0.34
8	ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.2...	33	0.34
9	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	28	0.50
10	DAN4_YEAST (P47179) Cell wall protein DAN4 precursor	32	0.58
11	NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)	32	0.76
12	CD5_BOVIN (P19238) T-cell surface glycoprotein CD5 precursor (Ly...	32	0.99
13	TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.2...	31	1.3
14	ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V...	31	1.7
15	MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)	31	1.7
16	L100_ADEP3 (Q9YTR7) Late 100 kDa protein	31	1.7
17	PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ...	31	1.7
18	V70K_TYMVA (P20131) 69 kDa protein	30	2.2
19	MUC1_MESAU (Q60528) Mucin-1 precursor	30	2.2
20	TBC12_HUMAN (O60347) TBC1 domain family member 12	30	2.2
21	SOX4_HUMAN (Q06945) Transcription factor SOX-4	30	2.2
22	MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12...	30	2.9
23	VGLG_HHV2H (P13290) Glycoprotein G	30	2.9
24	TEGU_EBV (P03186) Large tegument protein	30	2.9
25	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	30	2.9
26	PHSG_CHLMU (Q9PKE6) Glycogen phosphorylase (EC 2.4.1.1)	30	2.9
27	SP96_DICDI (P14328) Spore coat protein SP96	30	2.9
28	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	30	2.9
29	EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1...	30	2.9
30	EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (...	30	2.9
31	GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)	30	3.8
32	MA205_DROME (P23226) 205 kDa microtubule-associated protein	30	3.8
33	SEF1_YEAST (P34228) Suppressor protein SEF1	30	3.8
34	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	30	3.8
35	FANCA_MOUSE (Q9JL70) Fanconi anemia group A protein homolog (Pro...	30	3.8
36	MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)	30	3.8
37	CD5_MOUSE (P13379) T-cell surface glycoprotein CD5 precursor (Ly...	30	3.8
38	HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) ...	29	4.9
39	PHSG_CHLTR (O84250) Glycogen phosphorylase (EC 2.4.1.1)	29	4.9
40	EPAS1_MOUSE (P97481) Endothelial PAS domain-containing protein 1...	29	4.9
41	Y801_DEIRA (Q9RW68) Putative carotenoid cyclase DR0801	29	4.9
42	Y1002_MYCTU (O05586) Hypothetical protein Rv1002c/MT1031	29	4.9
43	RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7	29	4.9
44	B3A3_RAT (P23348) Anion exchange protein 3 (Neuronal band 3-like...	29	4.9
45	PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-co...	29	4.9
46	HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)	29	4.9
47	MMPS3_MYCTU (P65378) Putative membrane protein mmpS3	29	6.4
48	MMPS3_MYCBO (P65379) Putative membrane protein mmpS3	29	6.4
49	E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET...	29	6.4
50	CN004_HUMAN (Q9H1B7) Protein C14orf4	29	6.4
51	CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog	29	6.4
52	ADA1D_MOUSE (P97714) Alpha-1D adrenergic receptor (Alpha 1D-adre...	29	6.4
53	MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A ...	29	6.4
54	PALC_EMENI (Q9P905) pH-response regulator protein palC	29	6.4
55	VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane an...	28	8.4
56	DPOLA_LEIDO (O00874) DNA polymerase alpha catalytic subunit (EC ...	28	8.4
57	AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Pro...	28	8.4
58	PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-s...	28	8.4
59	APOA_HUMAN (P08519) Apolipoprotein(a) precursor (EC 3.4.21.-) (A...	28	8.4
60	D103A_PANTR (Q95JD2) Beta-defensin 103A precursor (Defensin, bet...	28	8.4
61	D103A_HUMAN (P81534) Beta-defensin 103A precursor (Beta-defensin...	28	8.4
62	CXGS_CONGE (P15472) Conotoxin GS (CGS)	28	8.4

>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -2

Query: 417 AVPTVELVLQN-EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLL 241
           A P+V+LV+       W + G + MV A+ G  CLGV++GG  PR  + +G   +E+NL+
Sbjct: 336 AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLV 395

Query: 240 EFDLQRARLGFSSSLL 193
            FDL R+R+GFS+S L
Sbjct: 396 VFDLARSRVGFSTSSL 411

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>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -2

Query: 417 AVPTVELVLQN-EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLL 241
           A P+V+LV+       W + G + MV A+ G  CLGV++GG  PR  V +G   +E+ L+
Sbjct: 342 AYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLM 401

Query: 240 EFDLQRARLGFSSSLL 193
            FDL R+R+GFS+S L
Sbjct: 402 VFDLARSRVGFSTSSL 417

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
 Frame = +2

Query: 182  VCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAP 361
            +C+N  +  N     C     R++   C P+   +   +PP+TTP   +PP   T  L P
Sbjct: 1364 ICKNEDQFGNGPFGLCYDYKIRVNC--CWPMDKCITTPSPPTTTP---SPPPTTTTTLPP 1418

Query: 362  NTTHDAASFCSTSSTVGT------AGPTRVLPTLLPS 454
             TT    +  +T+    T         T  LPT  PS
Sbjct: 1419 TTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPS 1455



 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +2

Query: 266  PPITTDVRGAAPPSTTPRQS-----APPLAATIELAPNTTHDAASFCSTSSTVGTAGPTR 430
            PP TT      PP+TTP        +PP+  T    P TT   +S  +T+ +  T   T 
Sbjct: 1644 PPTTTTT---PPPTTTPSPPTTTTPSPPITTTTTPPPTTT--PSSPITTTPSPPTTTMTT 1698

Query: 431  VLPTLLPS 454
              PT  PS
Sbjct: 1699 PSPTTTPS 1706



 Score = 29.3 bits (64), Expect = 4.9
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = +2

Query: 239  SSRLSSIVCPPITTDVRGAAPPSTTPR----QSAPPLAATIELAPNTTHDAASFCSTSST 406
            S  +S+   PP TT     +PP+TTP       +PP   T    P TT    S   T+  
Sbjct: 1455 SPPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPTTT---PSPPMTTPI 1508

Query: 407  VGTAGPTRVLPTLLPS 454
               A  T + PT  PS
Sbjct: 1509 TPPASTTTLPPTTTPS 1524

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>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)|
            (E3 ubiquitin protein ligase URE-B1) (E3Histone)
          Length = 4377

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
 Frame = +2

Query: 149  VVYPRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSA 328
            +  P  K+ +V   +S    + +     S ++  ++    P  T      P +TTP  SA
Sbjct: 3463 IALPENKVSEVQTNSSNSGSSTAATSNTSTTTTTTTTATAPTPTP-----PAATTPVTSA 3517

Query: 329  PPLAA-----TIELAPNTT----HDAASFCSTSSTVGTAGPTRV 433
            P L A     TI +A +TT      A +  STS+T G+  P +V
Sbjct: 3518 PALVAATAISTITVAASTTVTTPTTATTTVSTSTTKGSKSPAKV 3561

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>RAD52_MOUSE (P43352) DNA repair protein RAD52 homolog|
          Length = 420

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +2

Query: 158 PRRKLLQV-VCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPP 334
           PR+  L V + +  RE+  PS+ + R NS R +  +  P   +V       T+P +S+PP
Sbjct: 180 PRQLPLDVDLTKTKREDFEPSVEQARYNSCRQNEALGLPKPQEV-------TSPCRSSPP 232

Query: 335 LAATIELAPNTTHDAASFCSTSSTV 409
             + I+L      D +S CS ++T+
Sbjct: 233 HDSNIKL--QGAKDISSSCSLAATL 255

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>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
            light chain LC1]
          Length = 2468

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = +2

Query: 209  NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASF 388
            +P  A  + +S ++S +  P     V  AA P+TTP   A   A   E    T + A + 
Sbjct: 2271 SPKPAGLKESSDKVSRVASPKKKESVEKAAKPTTTPEVKA---ARGEEKDKETKNAANAS 2327

Query: 389  CSTSSTVGTAGP 424
             S S+   TAGP
Sbjct: 2328 ASKSAKTATAGP 2339

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>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase C) (Cellulase C)
          Length = 1101

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = -2

Query: 438 GSTRVGPAVPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHT 259
           GS     A P  E    +    WV +G +  +    GALC+ V  G A     VV+ G  
Sbjct: 26  GSGTALAASPIGEGTFDDGPEGWVAYGTDGPLDTSTGALCVAVPAGSAQYGVGVVLNGVA 85

Query: 258 MED 250
           +E+
Sbjct: 86  IEE 88

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>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)|
           (Nucellin-like protein)
          Length = 410

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -2

Query: 348 MVAAKGGALCLGVVDGGAAPRT---SVVIGGHTMEDNLLEFDLQRARLGF 208
           ++ ++ G +CLG++DG     +   + +IGG TM D ++ +D +R+ LG+
Sbjct: 342 LIISQEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSERSLLGW 391

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 28.5 bits (62), Expect(2) = 0.50
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
 Frame = +2

Query: 191 NSREELNPSLARC------RSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIE 352
           N    L+P+  R       +SN   +SS+     ++ V   A P+ TP  +A  ++ ++ 
Sbjct: 421 NQNPHLSPAAGRLGVPTSMQSNGPSVSSVA----SSSVPSPATPTLTPTSTATSMSTSVP 476

Query: 353 LAPNTTHDAASFCSTSSTVGTAGPTRVLPTLLPS 454
               T+  A    S   ++ +AGP+  +P   PS
Sbjct: 477 ----TSSPAPPAMSPHHSLNSAGPSPGMPNSGPS 506



 Score = 22.7 bits (47), Expect(2) = 0.50
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 51  NPGGNTQTNFDCNLNNASTH 110
           NPGG    N   N +NAS +
Sbjct: 401 NPGGGNSNNNGSNTSNASNN 420

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>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +2

Query: 233 SNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVG 412
           S +S+ S+    P T+        STTP  S  P  +T   AP T+    S  ST+ST+ 
Sbjct: 237 STTSQTSTKSTTPTTSST------STTPTTSTTPTTSTTSTAPTTS--TTSTTSTTSTIS 288

Query: 413 TAGPT 427
           TA  T
Sbjct: 289 TAPTT 293

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>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)|
          Length = 1176

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +2

Query: 176  QVVCRNSRE-ELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQS----APPLA 340
            Q +C + R   L+        + S  SS   PP        +PPST PR S    +PP +
Sbjct: 978  QQMCPHKRTFALSDGFVGTDPSPSSCSSSALPP--------SPPSTPPRSSSPVTSPPQS 1029

Query: 341  ATIELAPNTTHDAASFCSTSSTVGTAGP 424
             T    P TT  A+S C+T+ + G A P
Sbjct: 1030 PTSSATPATT--ASSSCTTNPS-GPASP 1054

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>CD5_BOVIN (P19238) T-cell surface glycoprotein CD5 precursor (Lymphocyte|
           antigen T1/Leu-1)
          Length = 495

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 209 NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPP 334
           N SL R R   S     + PP TT     +PP+TTP  +APP
Sbjct: 117 NCSLNRGRQVDSLALICLEPPRTTAPPTTSPPTTTPEPTAPP 158

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>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = +2

Query: 188 RNSREELNPSLARCRSNSSRLSSIVCPPITTDVR-------GAAPPSTTPRQSAPPLA-- 340
           R S    +P+    +++ +R S    PP  +  R          PP  +P ++ PP A  
Sbjct: 3   RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPPPQASP 62

Query: 341 --ATIELAPNTTHDAASFCSTSSTVGTAGPTRV 433
             A+   AP +   +    S  S   T+ PTRV
Sbjct: 63  ARASPARAPPSRSSSGRSSSARSASTTSSPTRV 95

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>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 269 PITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTA 418
           P+     GAAPPS +P   A   AA+   A +++  ++S  S+S++  +A
Sbjct: 565 PLAPASAGAAPPSASPSSQAAVAAASSSSASSSSASSSSASSSSASSSSA 614

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>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
 Frame = +2

Query: 191 NSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPL-----AATIEL 355
           +S EE   +  +  +     ++   P  TT    A P +TT  ++ P       A T   
Sbjct: 207 HSHEEHTTTTTKAPTTIQIATTTTTPTTTTTTTKATPTTTTTTKATPTTTTTTKATTTTT 266

Query: 356 APNTTHDAASFCSTSSTVGTAGPT 427
            P TT       +T +T  T  PT
Sbjct: 267 TPTTTTTTTKATTTPTTTTTTTPT 290

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>L100_ADEP3 (Q9YTR7) Late 100 kDa protein|
          Length = 838

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 233 SNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVG 412
           S +S L S   P +        PP   P  S PP     +  P  T DA   CS+SS+  
Sbjct: 6   SAASELGSSAAPTLPPP-----PPPPPPPTSPPPSLQQRQQEPTETDDAEDTCSSSSSSS 60

Query: 413 TAGPTRVLP 439
            +    V P
Sbjct: 61  ASSECFVSP 69

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>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous|
           T-cell lymphoma associated antigen se14-3) (CTCL tumor
           antigen se14-3) (Zinc finger MYND domain containing
           protein 8)
          Length = 1186

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPP--LAATIELAPNTTHDAASFCSTSSTVGTAGP 424
           P    DV G  PPSTT    +PP     T   A  +   A +  STSSTV    P
Sbjct: 736 PSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAP 790

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 SLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCS 394
           SL   RS S +L   +  P+    +  +P    P    P +     LAPN+T D      
Sbjct: 200 SLRPGRSRSRQLQPTIRRPLLAPNQFNSPRQPPPLSDDPGILGPCPLAPNSTRDPPPRPI 259

Query: 395 TSSTVGTAG--PTRVLPTLLP 451
           T     T G  P  VLP   P
Sbjct: 260 TPGPFNTHGVRPLSVLPRAPP 280

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>MUC1_MESAU (Q60528) Mucin-1 precursor|
          Length = 676

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/69 (26%), Positives = 31/69 (44%)
 Frame = +2

Query: 212 PSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFC 391
           P+ +   S ++ + S    P+T+    +A        SAPP ++ +  A    H  +S  
Sbjct: 89  PTSSAVNSATTPVHSGSSAPVTSSAVNSATTPVHSGSSAPPTSSAVNSATTPVHSGSSAP 148

Query: 392 STSSTVGTA 418
            TSS V +A
Sbjct: 149 VTSSAVNSA 157



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTA 418
           PP ++ V  A  P  +   SAPP ++ +  A    H  +S   TSS V +A
Sbjct: 68  PPTSSAVNSATTPGHSG-SSAPPTSSAVNSATTPVHSGSSAPVTSSAVNSA 117



 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 269 PITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTA 418
           P+T+    +A        SAPP ++ +  A    H  +S   TSS V  A
Sbjct: 228 PVTSSAVNSATTPVHSGSSAPPTSSVVNSATTPVHSGSSAPPTSSAVNLA 277



 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 269 PITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTA 418
           P+T+    +A        SAPP ++ +  A    H  +S   TSS V +A
Sbjct: 168 PVTSSAVDSATTPVHSGSSAPPTSSAVNSATTPVHSGSSAPVTSSAVNSA 217

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>TBC12_HUMAN (O60347) TBC1 domain family member 12|
          Length = 769

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 158 PRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSA 328
           P R+LLQ     + E+L P L  C             P+     GA PPS  PR  A
Sbjct: 59  PPRQLLQRYLAAAGEQLEPGLCYC-------------PLPAGQAGAPPPSAAPRSDA 102

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>SOX4_HUMAN (Q06945) Transcription factor SOX-4|
          Length = 474

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 138 PFHLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPA 245
           P  L   +G  C   +   +GRS   +SPAA R+PA
Sbjct: 321 PLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPA 356

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>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin|
           phosphatase-targeting subunit 1) (Myosin phosphatase
           target subunit 1) (Protein phosphatase myosin-binding
           subunit)
          Length = 1030

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +2

Query: 206 LNPSLARCRSNSSRL---SSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHD 376
           L  SL    S ++++   SS      +T  R  A  ST   + + P A TI +AP   + 
Sbjct: 582 LQKSLLSSTSTTTKITTGSSSAGTQSSTSNRLWAEDSTEKEKDSVPTAVTIPVAPTVVNA 641

Query: 377 AASFCS-TSSTVGTAGPT 427
           AAS  + T++T GT   T
Sbjct: 642 AASTTTLTTTTAGTVSST 659

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>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 293 AAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAGPTRVLPT 442
           AAP + +P  ++PP       AP  +    S  +T++T GT G  R  PT
Sbjct: 489 AAPTADSPLTASPPAT-----APGPSAANVSVAATTATPGTRGTARTPPT 533

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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
 Frame = +2

Query: 134 DAIPFVVYP-RRKLLQVVCRN--SREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPP 304
           D+ P V+ P  R+++    R   SR   + S    R + ++ +S    P +     AAP 
Sbjct: 287 DSSPPVMLPFERRIIPYNLRPLPSRSFTSDSFPAARYSPAKTNSPPSSPASAAPASAAPA 346

Query: 305 STTPRQSAPPLAATIELAPNTTHDAASFCSTS 400
           S  P  +AP  AA    AP +   A++  ++S
Sbjct: 347 SAAPASAAPASAAPASAAPASAAPASAAPASS 378

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = +2

Query: 242  SRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAG 421
            +RLS    P  T      A PS+TP       +  +     TT    S  + SST GTA 
Sbjct: 1993 TRLSQTTTPMATMST---ATPSSTPE--TVHTSTVLTTTATTTGATGSVATPSSTPGTAH 2047

Query: 422  PTRVLPT 442
             T+VL T
Sbjct: 2048 TTKVLTT 2054



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 242  SRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAG 421
            S +++++ P  +T    A   ST      P +   +   P  T   AS   +SSTVGT  
Sbjct: 4793 STIATVMVPTGST----ATTSSTLGTAHTPKVVTAMATMPTAT---ASTVPSSSTVGTTR 4845

Query: 422  PTRVLPTLLPS 454
               VLP+ LP+
Sbjct: 4846 TPAVLPSSLPT 4856



 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +2

Query: 269  PITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAGPTRVL 436
            P T      A PS+TP  +   +   +     TT    S  + SST GTA P +VL
Sbjct: 4171 PSTPATSSTAMPSSTPGTTW--ILTELTTTATTTASTGSTATPSSTPGTAPPPKVL 4224



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 239  SSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGT 415
            SS   + + PP+        P +TTP  S   +  T    P TTH A    +T++TV T
Sbjct: 4547 SSSPGTALTPPVWISTT-TTPTTTTPTTSGSTV--TPSSIPGTTHTARVLTTTTTTVAT 4602



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 23/67 (34%), Positives = 28/67 (41%)
 Frame = +2

Query: 242  SRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAG 421
            +RLS    P  T      A PS+TP  +      T      TT    S  + SST GTA 
Sbjct: 2522 TRLSQTTTPTATMST---ATPSSTPETAHTSTVLTA--TATTTGATGSVATPSSTPGTAH 2576

Query: 422  PTRVLPT 442
             T+V  T
Sbjct: 2577 TTKVPTT 2583

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>PHSG_CHLMU (Q9PKE6) Glycogen phosphorylase (EC 2.4.1.1)|
          Length = 813

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/81 (23%), Positives = 34/81 (41%)
 Frame = -2

Query: 414 VPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235
           +P  +L  Q   A     G  +M  A  GAL +G +DG      ++ +  H  ++++  F
Sbjct: 639 IPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDG-----ANIEMAEHIGKEHMFIF 693

Query: 234 DLQRARLGFSSSLLFRQTTCN 172
            L    +    +  + Q  CN
Sbjct: 694 GLLEEEISALRNEYYPQGICN 714

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>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/84 (23%), Positives = 39/84 (46%)
 Frame = +2

Query: 191 NSREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTT 370
           +S    +PS +   S+ S  +S    P ++    +AP S+    SAP  +A+   A +++
Sbjct: 471 SSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSS 530

Query: 371 HDAASFCSTSSTVGTAGPTRVLPT 442
             +A+  + ++   TA  T    T
Sbjct: 531 ASSAATTAATTIATTAATTTATTT 554

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +1

Query: 334 LGGHHRVGPEHHPRRGLVLQHQLHRRHGRAHAGAPHLAP 450
           LG HH   P HH        H  H  H   H    H AP
Sbjct: 166 LGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAP 204

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>EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1 (EPAS-1)|
           (Member of PAS protein 2) (MOP2) (Hypoxia-inducible
           factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1
           alpha-like factor) (HLF)
          Length = 870

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129
           SSI    GS  S PPCC       +S  GR   +W PD
Sbjct: 605 SSIFFDAGSKASLPPCCGQASTPLSSMGGRSNTQWPPD 642

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>EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (EPAS-1)|
           (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2
           alpha)
          Length = 874

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129
           S+I    GS GS PPCC       +S  GR    W PD
Sbjct: 604 STIFFDAGSKGSLPPCCGQASTPLSSMGGRSNTPWPPD 641

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>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)|
          Length = 544

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = +2

Query: 200 EELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDA 379
           ++LN        +S        P  T   +  + P++TP Q+ PP  +   + P TT   
Sbjct: 98  DQLNDDRFEVSDSSDFSKQTPTPTPTPTSKPTSTPTSTPSQTIPPTVSP-TVPPQTTSPT 156

Query: 380 ASFCSTSSTVGTAGPT 427
           +   ST +   T  PT
Sbjct: 157 SKPTSTPTPTSTPTPT 172

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>MA205_DROME (P23226) 205 kDa microtubule-associated protein|
          Length = 1185

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -2

Query: 456 YDGSKVGSTRVGPAVPTVELVLQNEAASWV-VFGANSMVAAKGGALCLGVVDGGAAPRTS 280
           +  +K GST       T  LV++   AS   V+GAN   A +     LG+     A +TS
Sbjct: 803 HSATKAGSTAASAKSKTETLVMKKTTASSTSVYGANKSAAPRPSTARLGIKSTSIATKTS 862

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>SEF1_YEAST (P34228) Suppressor protein SEF1|
          Length = 1057

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 15/122 (12%)
 Frame = +2

Query: 56  RGKHTNKF*LQSEQRKH-----------TYHLLQSHPDAIPFVVYPRRKLLQVVCRNSRE 202
           +G +TNKF   +E   H           +  L+ + P+ +P ++         +  NS+E
Sbjct: 194 QGSNTNKFKANNEASSHMTLRASSLAQDSKGLVATEPNKLPPLLND-----SALPNNSKE 248

Query: 203 ELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPST----TPRQSAPPLAATIELAPNTT 370
            L P+L      ++   +    P +   +  +P +T    T   + PP AAT  +A N  
Sbjct: 249 SLPPALQMAFYKNNSAGNTPNGPFSPIQKTYSPHTTSTTVTTTTNQPPFAATSHVATNNN 308

Query: 371 HD 376
            D
Sbjct: 309 AD 310

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (Protein archipelago)
          Length = 1326

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -2

Query: 399 LVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGH 262
           +VL +E++++ +  +NS+  + G A  +GVV    +  T  + GGH
Sbjct: 89  VVLDDESSTFEISSSNSLPTSAGAASTVGVVAVDDSSSTDTLNGGH 134

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>FANCA_MOUSE (Q9JL70) Fanconi anemia group A protein homolog (Protein FACA)|
          Length = 1439

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
 Frame = +2

Query: 62  KHTNKF*LQSEQRKHTY------HLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLA 223
           K  N   L++  R HT+       LLQSHPD+    ++  R L     R+  E++  S  
Sbjct: 169 KAQNSLLLEAMWRLHTHSVVSLQELLQSHPDSEAMAMWLFRNL-----RSLCEQIGASCP 223

Query: 224 RCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAAT 346
              +  + LS +V   I+   +G++ P         P  AT
Sbjct: 224 SPDTTEAMLSGLVQLLISRGFQGSSDPRRLVEPERLPQVAT 264

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>MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)|
          Length = 1125

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
 Frame = +2

Query: 209  NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASF 388
            +PS       SSR  +   P   T ++    P+   R +A   +A+ +L+ + T  A+S 
Sbjct: 785  SPSTLVSTGPSSRSPATTLPKRPTSIKTEGKPADVKRMTAK--SASADLSRSKTTSASSV 842

Query: 389  CSTSSTVGTAGP-----TRVLPTLLPS 454
               ++  G A P     TRV P   PS
Sbjct: 843  KRNTTPTGAAPPAGMTSTRVKPMSAPS 869

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>CD5_MOUSE (P13379) T-cell surface glycoprotein CD5 precursor (Lymphocyte|
           antigen Ly-1) (Lyt-1)
          Length = 494

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
 Frame = +2

Query: 176 QVVCRNSREELNPSLARCRSNSSRLS----SIVC--PPITTDVRGAAPPSTTPRQSAPP 334
           QV C+ S      S++ C + SS+      S++C  P  TT      PP+T P  +APP
Sbjct: 103 QVFCQGSPW----SISNCNNTSSQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPP 157

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>HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) (Protein msh)|
          Length = 515

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 20/113 (17%)
 Frame = +2

Query: 104 HTYHLLQSHPDAIPFVVYPRRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPPITTD 283
           H  HLLQ H          +++  Q         ++P        +SRLS+     +  D
Sbjct: 88  HQQHLLQQHQQH-----QQQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLAD 142

Query: 284 VRGAAPP--------------STTPRQSA------PPLAATIELAPNTTHDAA 382
            R   PP              +T+P   A      PP +A  ++  NT H AA
Sbjct: 143 TRPRTPPNQAADGPQNLTSSAATSPISQASSTPPPPPASAAAQVPANTFHPAA 195

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>PHSG_CHLTR (O84250) Glycogen phosphorylase (EC 2.4.1.1)|
          Length = 814

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 19/81 (23%), Positives = 33/81 (40%)
 Frame = -2

Query: 414 VPTVELVLQNEAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGGHTMEDNLLEF 235
           +P  +L  Q   A     G  +M  A  GAL +G +DG      ++ +  H  ++++  F
Sbjct: 639 IPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDG-----ANIEMAEHIGKEHMFIF 693

Query: 234 DLQRARLGFSSSLLFRQTTCN 172
            L    +       + Q  CN
Sbjct: 694 GLLEEEISELRKEYYPQGICN 714

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>EPAS1_MOUSE (P97481) Endothelial PAS domain-containing protein 1 (EPAS-1)|
           (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2
           alpha) (HIF-1 alpha-like factor) (MHLF) (HIF-related
           factor) (HRF)
          Length = 874

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129
           SSI    GS GS  PCC       +S  GR   +W PD
Sbjct: 604 SSIFFDAGSKGSLSPCCGQASTPLSSMGGRSNTQWPPD 641

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>Y801_DEIRA (Q9RW68) Putative carotenoid cyclase DR0801|
          Length = 410

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 384 EAASWVVFGANSMVAAKGGALCLGVVDGGAAPRTSVVIGG 265
           E+  WV F  N+   A GG L  G   G   P +   + G
Sbjct: 244 ESEEWVAFPMNAQAPAPGGVLAYGAAAGRVHPVSGFQVAG 283

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>Y1002_MYCTU (O05586) Hypothetical protein Rv1002c/MT1031|
          Length = 503

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
 Frame = -2

Query: 423 GPAVPTVELVLQNEAASWVVFGANSMVAAKGGALCLG-VVDGGA--------APRTSVVI 271
           GP VP  +    +    W+V G  +++A     L LG + D G         AP+   V+
Sbjct: 8   GPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVL 67

Query: 270 GGHTMEDN 247
             H +EDN
Sbjct: 68  NNHGVEDN 75

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>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7|
          Length = 695

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +2

Query: 209 NPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASF 388
           NPS A   +++S L+S + P    D  G++  S++  +++ PLA+  E  P         
Sbjct: 394 NPSTAP--ASASPLASTLKPSTANDTNGSSSSSSSNPRTSSPLASNAENKP--------- 442

Query: 389 CSTSSTVGTAGPTRVLPTLLP 451
                 V    P  +LPTL P
Sbjct: 443 -----PVAQQSPPVLLPTLPP 458

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>B3A3_RAT (P23348) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 20/83 (24%), Positives = 35/83 (42%)
 Frame = +2

Query: 194 SREELNPSLARCRSNSSRLSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTH 373
           S E+ +P L+     +  L S+  P   +  R  + PS   R S      +   +P+ ++
Sbjct: 170 SDEDDSPGLSIKAPCAKALPSVGLPSDQSPQRSGSSPSPRARASRISTEKSRPWSPSASY 229

Query: 374 DAASFCSTSSTVGTAGPTRVLPT 442
           D        S +G  GP + +PT
Sbjct: 230 DLRERLCPGSALGNPGPEQRVPT 252

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>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 239  SSRLSSIVCPPITTDVRGAAPPSTTP----RQSAPPLAATIELAPNTTHDAASFC-STSS 403
            ++ LSS   PP+ T    ++PP   P        PPL  T+ L+  ++  +   C S  S
Sbjct: 945  TASLSSGQLPPLLTPTEPSSPPPCPPVLTVATPPPPLLPTVPLSHPSSDASPQQCPSPFS 1004

Query: 404  TVGTAGPTRVL-PTLLPS 454
                  P  +L PT+ PS
Sbjct: 1005 NTTAQSPLPILSPTVSPS 1022

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>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)|
          Length = 1073

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 23/144 (15%)
 Frame = +2

Query: 65  HTNKF*LQSEQRKHTYHLLQSHPDAIPFVVYPRRKLLQVVCRNSREEL---NPSLARCRS 235
           HT+      + + H  H L   P     ++YP R L    C  +       + S + C S
Sbjct: 65  HTSHLQHAQQHQTHQQHPLLPPPLPTLPLIYPCRNLFPDGCDINHLACCSSSNSNSNCNS 124

Query: 236 NSSRLSSI-----------VCPPITTDVRGAAPPSTTPRQSAPPLAATIELA-------- 358
           +S+  SS             C    T     APP+T PR+  P  A  +++         
Sbjct: 125 DSNSTSSSPGNSHFFANGNTCAAALTP----APPATEPRKIKPLGAGKLKVGKTDSNSDS 180

Query: 359 -PNTTHDAASFCSTSSTVGTAGPT 427
             N    AA+  STS+T  T+  T
Sbjct: 181 NSNCDSRAAAAASTSATSATSATT 204

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>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAGPTRVL 436
           PP TT    A PP+TT   +APP        P TT        T S  GT  P  ++
Sbjct: 183 PPATTT---APPPATTTTAAAPP--------PTTTTPTGPRQVTYSVTGTKAPGDII 228

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>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAGPTRVL 436
           PP TT    A PP+TT   +APP        P TT        T S  GT  P  ++
Sbjct: 183 PPATTT---APPPATTTTAAAPP--------PTTTTPTGPRQVTYSVTGTKAPGDII 228

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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +2

Query: 233 SNSSRLSSIVCPPITTDVRGAAPP--STTPRQSAPPLAATIE 352
           S+SS LSS    P+ + V   +PP  +  P +++PP  A ++
Sbjct: 47  SSSSSLSSATPTPVASPVTPTSPPPAAAAPAEASPPAGAELQ 88

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>CN004_HUMAN (Q9H1B7) Protein C14orf4|
          Length = 796

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPPLAATIELAP--NTTH---DAASFCSTSSTVGTAGPTR 430
           PP+        PP + P+    P+AA + +A    T H   D +S  ST+++      + 
Sbjct: 601 PPLGPHSNRTTPPESAPQNGPSPMAALMSVADTLGTAHSPKDGSSVHSTTASARRNSSSP 660

Query: 431 VLPTLLP 451
           V P  +P
Sbjct: 661 VSPASVP 667

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>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog|
          Length = 775

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +2

Query: 266 PPITTDVRGAAPPSTTPRQSAPPLAATIELAP--NTTH---DAASFCSTSSTVGTAGPTR 430
           PP+        PP + P+    P+AA + +A    T H   D +S  ST+++      + 
Sbjct: 580 PPLGPHSNRTTPPESAPQNGPSPMAALMSVADTLGTAHSPKDGSSVHSTTASARRNSSSP 639

Query: 431 VLPTLLP 451
           V P  +P
Sbjct: 640 VSPASVP 646

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>ADA1D_MOUSE (P97714) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)|
           (Alpha 1D-adrenoreceptor) (Alpha-1A adrenergic receptor)
          Length = 562

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 167 KLLQVVCRNSREELNPSLARCRSNSSRLSSI-VCP-PITTDVRGAAPPSTTPR 319
           +LL+  CR  R  L PSL    ++  R  ++ +CP P     RG+  P  TPR
Sbjct: 409 RLLRCQCRRRRRRLWPSLRPPLASLDRRPALRLCPQPAHRTPRGSPSPHCTPR 461

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>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin|
           phosphatase-targeting subunit 1) (Myosin phosphatase
           target subunit 1) (Protein phosphatase myosin-binding
           subunit) (MBSP) (Serine/threonine protein phosphatase
           PP1 smooth muscle reg
          Length = 1032

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 275 TTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCS--TSSTVGTAGPT 427
           +T  R  A  ST   + + P AATI +AP     AAS  +  T++T GT   T
Sbjct: 608 STSNRLWAEDSTEKEKDSAPTAATILVAPTVVSAAASSTTALTTTTAGTLSST 660

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>PALC_EMENI (Q9P905) pH-response regulator protein palC|
          Length = 507

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +2

Query: 248 LSSIVCPPITTDVRGAAPPSTTPRQSAPPLAATIELAPNTTHDAASFCSTSSTVGTAGPT 427
           LSS+    +T  +  +  PS   R +A   A    L  +T H   SF S+S    T    
Sbjct: 148 LSSLARSGVTRTLYASTTPSAEQRTAAVQTATKHLLQASTIH---SFLSSSPYFATVSEA 204

Query: 428 RVLPTLLPS 454
             LP L P+
Sbjct: 205 ATLPDLAPA 213

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>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)|
          Length = 907

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
 Frame = +2

Query: 266 PPITTDVRGAAPPST-----TPRQSAP------PLAATIELAPNTTHDAASFCSTSSTVG 412
           P +TT    A  P+      TP  ++P      P +A     PN T       S +S V 
Sbjct: 525 PAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTLGKTSPTSAVT 584

Query: 413 TAGPTRVLPTL 445
           T  P    PTL
Sbjct: 585 TPTPNATSPTL 595

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>DPOLA_LEIDO (O00874) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1339

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 130 SGCHSICCLPKAEVVAGRLPEQQGGAEPEPRPLQIELQQ 246
           SG  +I  LP A+  A +L +   GA+P P+P Q  L Q
Sbjct: 48  SGDLTIPQLPSAKKAAKKLRKPPSGAKPTPKPKQQTLAQ 86

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>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)|
          Length = 1217

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +2

Query: 161  RRKLLQVVCRNSREELNPSLARCRSNSSRLSSIVCPP--ITTDVRGAAPPSTTPRQSAPP 334
            + K+  V+C   +  LN ++ RC+ ++    S        +T     AP   T R +  P
Sbjct: 1048 QEKIFAVLCLRCQSLLNMAMFRCKKDTVMKYSRTLSEHFKSTSKVAQAPSPCTARSTGVP 1107

Query: 335  LAATIELAPNTTHDAASFCSTSSTVGTAGPTRVLPT 442
              + +   P+      S  S  S++G+ G T  + T
Sbjct: 1108 --SPLSPMPSPASSVGSQSSAGSSMGSVGVTATVST 1141

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>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2364

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 109  ISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPEP 219
            +  S++P         P+AEV A   PE  GGA   P
Sbjct: 1924 VEVSSVPESSGETSAYPEAEVGASAAPEASGGASGSP 1960

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>APOA_HUMAN (P08519) Apolipoprotein(a) precursor (EC 3.4.21.-) (Apo(a)) (Lp(a))|
          Length = 4548

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 15/114 (13%)
 Frame = +2

Query: 155  YPRRKLLQVVCRNSREELNP--------------SLARCRSNSSRLSSIVCPPITTDVRG 292
            YP   L +  CRN   E+ P              +L RC    S +       +TT    
Sbjct: 3935 YPNAGLTRNYCRNPDAEIRPWCYTMDPSVRWEYCNLTRCPVTESSV-------LTTPTVA 3987

Query: 293  AAPPSTTPRQSAPPLAATIELAPNTTH-DAASFCSTSSTVGTAGPTRVLPTLLP 451
              P +  P + APP  + +    +  H D  S+   SST  T    +   +++P
Sbjct: 3988 PVPSTEAPSEQAPPEKSPV--VQDCYHGDGRSYRGISSTTVTGRTCQSWSSMIP 4039

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>D103A_PANTR (Q95JD2) Beta-defensin 103A precursor (Defensin, beta 103A)|
           (Defensin, beta 103) (Beta-defensin 3) (DEFB-3) (BD-3)
           (cBD-3)
          Length = 67

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +3

Query: 30  LFKRPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179
           LF  P    GG  NT   + C +      ++ C P        ST+G  CCR
Sbjct: 13  LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLTCLPKEEQIGKCSTRGRKCCR 64

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>D103A_HUMAN (P81534) Beta-defensin 103A precursor (Beta-defensin 3) (DEFB-3)|
           (BD-3) (hBD-3) (HBD3) (Defensin-like protein)
          Length = 67

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +3

Query: 30  LFKRPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179
           LF  P    GG  NT   + C +      ++ C P        ST+G  CCR
Sbjct: 13  LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCR 64

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>CXGS_CONGE (P15472) Conotoxin GS (CGS)|
          Length = 34

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 230 CSGRGSGSAPPCCSGRR 180
           CSGRGS   P CC G R
Sbjct: 2   CSGRGSRCPPQCCMGLR 18


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,438,043
Number of Sequences: 219361
Number of extensions: 1378961
Number of successful extensions: 6807
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 5994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6740
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result