ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart13a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 323 bits (163), Expect = 3e-85 Identities = 342/399 (85%), Gaps = 2/399 (0%) Strand = Plus / Plus Query: 133 aagcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtcc 192 ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 4061851 aagcagccgtgggcgtcgcagtgcaccggcgggcggtggaggaaggcgaggcactggtcg 4061910 Query: 193 gccggccgctggtccggccggccggcgatgcagttctgccggtcgtcgttgcgccgaagc 252 ||||| |||||||| |||| ||||||||||||||||| ||||||||| ||| || || Sbjct: 4061911 gccgggcgctggtcgggcctcccggcgatgcagttctggcggtcgtcgacgcggcggag- 4061969 Query: 253 gccgtg-caccgctccggctcgccgcagaagtagttgtatgagtaggtgaagttggccag 311 || | | ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4061970 gcggaggcaccgctccggctcgccgcagaagtagttgtatgagtaggtgaagttcctgag 4062029 Query: 312 ccgcggcagcgcacagatcccctccggtatgtgtccggtgagctcgttgtgcgcgacgtc 371 |||||||||||| |||||||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 4062030 ccgcggcagcgcgcagatcccctccgggatgtggccggcgagctcgttgcgcgcgacgtc 4062089 Query: 372 gagctgctccagcgcgtgcatcccggccatagactccggcagcgttccttggagctggtt 431 |||||||||||||| |||||| ||||| |||||||||||||| || || |||||||| Sbjct: 4062090 gagctgctccagcgaccgcatccacgccatggactccggcagcgtcccctgcagctggtt 4062149 Query: 432 aaagctcacgtccagcacggtgagctcgcgtagccacccaatctcctgcgggatgcagga 491 ||| ||||| |||||||||||||| | || || |||||| ||||||||||||| Sbjct: 4062150 gttgctgacgtcgagcacggtgagctccccgaggtggccgatctccggcgggatgcagga 4062209 Query: 492 tcgaatgccggagttgatcatgaggagctcgttgagcgt 530 || | ||||||||||| || || ||||||||| ||||| Sbjct: 4062210 ccgcacgccggagttgagcacgacgagctcgttcagcgt 4062248
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 323 bits (163), Expect = 3e-85 Identities = 342/399 (85%), Gaps = 2/399 (0%) Strand = Plus / Plus Query: 133 aagcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtcc 192 ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 54709 aagcagccgtgggcgtcgcagtgcaccggcgggcggtggaggaaggcgaggcactggtcg 54768 Query: 193 gccggccgctggtccggccggccggcgatgcagttctgccggtcgtcgttgcgccgaagc 252 ||||| |||||||| |||| ||||||||||||||||| ||||||||| ||| || || Sbjct: 54769 gccgggcgctggtcgggcctcccggcgatgcagttctggcggtcgtcgacgcggcggag- 54827 Query: 253 gccgtg-caccgctccggctcgccgcagaagtagttgtatgagtaggtgaagttggccag 311 || | | ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 54828 gcggaggcaccgctccggctcgccgcagaagtagttgtatgagtaggtgaagttcctgag 54887 Query: 312 ccgcggcagcgcacagatcccctccggtatgtgtccggtgagctcgttgtgcgcgacgtc 371 |||||||||||| |||||||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 54888 ccgcggcagcgcgcagatcccctccgggatgtggccggcgagctcgttgcgcgcgacgtc 54947 Query: 372 gagctgctccagcgcgtgcatcccggccatagactccggcagcgttccttggagctggtt 431 |||||||||||||| |||||| ||||| |||||||||||||| || || |||||||| Sbjct: 54948 gagctgctccagcgaccgcatccacgccatggactccggcagcgtcccctgcagctggtt 55007 Query: 432 aaagctcacgtccagcacggtgagctcgcgtagccacccaatctcctgcgggatgcagga 491 ||| ||||| |||||||||||||| | || || |||||| ||||||||||||| Sbjct: 55008 gttgctgacgtcgagcacggtgagctccccgaggtggccgatctccggcgggatgcagga 55067 Query: 492 tcgaatgccggagttgatcatgaggagctcgttgagcgt 530 || | ||||||||||| || || ||||||||| ||||| Sbjct: 55068 ccgcacgccggagttgagcacgacgagctcgttcagcgt 55106
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 208 bits (105), Expect = 1e-50 Identities = 222/261 (85%) Strand = Plus / Minus Query: 270 ctcgccgcagaagtagttgtatgagtaggtgaagttggccagccgcggcagcgcacagat 329 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1018 ctcgccgcagaagtagttgtatgagtaggtgaagttcctgagccgcggcagcgcgcagat 959 Query: 330 cccctccggtatgtgtccggtgagctcgttgtgcgcgacgtcgagctgctccagcgcgtg 389 ||||||||| ||||| |||| |||||||||| |||||||||||||||||||||||| | Sbjct: 958 cccctccgggatgtggccggcgagctcgttgcgcgcgacgtcgagctgctccagcgaccg 899 Query: 390 catcccggccatagactccggcagcgttccttggagctggttaaagctcacgtccagcac 449 ||||| ||||| |||||||||||||| || || |||||||| ||| ||||| ||||| Sbjct: 898 catccacgccatggactccggcagcgtcccctgcagctggttgttgctgacgtcgagcac 839 Query: 450 ggtgagctcgcgtagccacccaatctcctgcgggatgcaggatcgaatgccggagttgat 509 ||||||||| | || || |||||| ||||||||||||| || | ||||||||||| Sbjct: 838 ggtgagctccccgaggtggccgatctccggcgggatgcaggaccgcacgccggagttgag 779 Query: 510 catgaggagctcgttgagcgt 530 || || ||||||||| ||||| Sbjct: 778 cacgacgagctcgttcagcgt 758
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 188 bits (95), Expect = 1e-44 Identities = 212/251 (84%) Strand = Plus / Minus Query: 280 aagtagttgtatgagtaggtgaagttggccagccgcggcagcgcacagatcccctccggt 339 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1008 aagtagttgtatgagtaggtgaagttcctgagccgcggcagcgcgcagatcccctccggg 949 Query: 340 atgtgtccggtgagctcgttgtgcgcgacgtcgagctgctccagcgcgtgcatcccggcc 399 ||||| |||| |||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 948 atgtggccggcgagctcgttgcgcgcgacgtcgagctgctccagcgaccgcatccacgcc 889 Query: 400 atagactccggcagcgttccttggagctggttaaagctcacgtccagcacggtgagctcg 459 || |||||||||||||| || || |||||||| ||| ||||| |||||||||||||| Sbjct: 888 atggactccggcagcgtcccctgcagctggttgttgctgacgtcgagcacggtgagctcc 829 Query: 460 cgtagccacccaatctcctgcgggatgcaggatcgaatgccggagttgatcatgaggagc 519 | || || |||||| ||||||||||||| || | ||||||||||| || || |||| Sbjct: 828 ccgaggtggccgatctccggcgggatgcaggaccgcacgccggagttgagcacgacgagc 769 Query: 520 tcgttgagcgt 530 ||||| ||||| Sbjct: 768 tcgttcagcgt 758
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 107 bits (54), Expect = 4e-20 Identities = 95/106 (89%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 135 gcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtccgc 194 |||||||||| ||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 99401 gcagccgtgcgcgtcgcagtgcaccggcgggcggtgcaggaacgcgatgcactcct-cgc 99343 Query: 195 cgg-ccgctggtccggccggccggcgatgcagttctgccggtcgtc 239 ||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 99342 cggagcgctggtcggggcggccggcgatgcagttctggcggtcgtc 99297 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||||||||| |||||| |||||||||||||| Sbjct: 99269 cggctcgccgcagaagaagttgtgggagtaggtgaagtt 99231 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 356 cgttgtgcgcgacgtcgagctgctccagcgc 386 ||||||||||||||| ||||||||||||||| Sbjct: 99180 cgttgtgcgcgacgttgagctgctccagcgc 99150
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 4e-20 Identities = 95/106 (89%), Gaps = 2/106 (1%) Strand = Plus / Plus Query: 135 gcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtccgc 194 |||||||||| ||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 32780140 gcagccgtgcgcgtcgcagtgcaccggcgggcggtgcaggaacgcgatgcactcct-cgc 32780198 Query: 195 cgg-ccgctggtccggccggccggcgatgcagttctgccggtcgtc 239 ||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 32780199 cggagcgctggtcggggcggccggcgatgcagttctggcggtcgtc 32780244 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 356 cgttgtgcgcgacgtcgagctgctccagcgc 386 ||||||||||||||| ||||||||||||||| Sbjct: 32780361 cgttgtgcgcgacgttgagctgctccagcgc 32780391 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||||||||| |||||| |||||||||||||| Sbjct: 32780272 cggctcgccgcagaagaagttgtgggagtaggtgaagtt 32780310 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tatgtgtatatatatacgac 72 |||||||||||||||||||| Sbjct: 502317 tatgtgtatatatatacgac 502336
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 4e-20 Identities = 95/106 (89%), Gaps = 2/106 (1%) Strand = Plus / Plus Query: 135 gcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtccgc 194 |||||||||| ||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 32870650 gcagccgtgcgcgtcgcagtgcaccggcgggcggtgcaggaacgcgatgcactcct-cgc 32870708 Query: 195 cgg-ccgctggtccggccggccggcgatgcagttctgccggtcgtc 239 ||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 32870709 cggagcgctggtcggggcggccggcgatgcagttctggcggtcgtc 32870754 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 356 cgttgtgcgcgacgtcgagctgctccagcgc 386 ||||||||||||||| ||||||||||||||| Sbjct: 32870871 cgttgtgcgcgacgttgagctgctccagcgc 32870901 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||||||||| |||||| |||||||||||||| Sbjct: 32870782 cggctcgccgcagaagaagttgtgggagtaggtgaagtt 32870820 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tatgtgtatatatatacgac 72 |||||||||||||||||||| Sbjct: 502315 tatgtgtatatatatacgac 502334
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 107 bits (54), Expect = 4e-20 Identities = 95/106 (89%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 135 gcagccgtgcccgtcgcagtgcaccggcgggcggtgtaggaacgcgaggcactggtccgc 194 |||||||||| ||||||||||||||||||||||||| |||||||||| ||||| | ||| Sbjct: 1222 gcagccgtgcgcgtcgcagtgcaccggcgggcggtgcaggaacgcgatgcactcct-cgc 1164 Query: 195 cgg-ccgctggtccggccggccggcgatgcagttctgccggtcgtc 239 ||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 1163 cggagcgctggtcggggcggccggcgatgcagttctggcggtcgtc 1118 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||||||||| |||||| |||||||||||||| Sbjct: 1090 cggctcgccgcagaagaagttgtgggagtaggtgaagtt 1052 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 356 cgttgtgcgcgacgtcgagctgctccagcgc 386 ||||||||||||||| ||||||||||||||| Sbjct: 1001 cgttgtgcgcgacgttgagctgctccagcgc 971
>gb|AY106034.1| Zea mays PCO099903 mRNA sequence Length = 687 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagttggccagccgcggcagcgcaca 326 |||||||||||||||| ||||||| |||||||||||||| || ||||||| | || Sbjct: 649 cggctcgccgcagaagaagttgtacgagtaggtgaagttcttgaggtgcggcaggccgca 590 Query: 327 gatcccctccggtatgtgtccggtgagctcgttgtgcgcgacgtcgagctgctccagcgc 386 || | ||||||||| | |||| ||| |||||||||||||||||||||||||||||| Sbjct: 589 gacgctctccggtatctcgccggcgaggcggttgtgcgcgacgtcgagctgctccagcgc 530
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 897 gttgtgcgcgacgtcgagctgctcca 872 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||| |||||||||||| ||| |||||||||| Sbjct: 987 cggctcgccggtgaagtagttgtaggagaaggtgaagtt 949
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 993 gttgtgcgcgacgtcgagctgctcca 968
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 124619 gttgtgcgcgacgtcgagctgctcca 124644 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||| |||||||||||| ||| |||||||||| Sbjct: 124529 cggctcgccggtgaagtagttgtaggagaaggtgaagtt 124567
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 4756614 gttgtgcgcgacgtcgagctgctcca 4756639 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||| |||||||||||| ||| |||||||||| Sbjct: 4756524 cggctcgccggtgaagtagttgtaggagaaggtgaagtt 4756562 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 3762766 ggccgctggtccggccggccg 3762746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 4179421 gttgtgcgcgacgtcgagctgctcca 4179446 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gcgcgacgtcgagctgctcc 381 |||||||||||||||||||| Sbjct: 21344449 gcgcgacgtcgagctgctcc 21344430
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 17388 gttgtgcgcgacgtcgagctgctcca 17413
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 126392 gttgtgcgcgacgtcgagctgctcca 126417
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 993 gttgtgcgcgacgtcgagctgctcca 968
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 357 gttgtgcgcgacgtcgagctgctcca 382 |||||||||||||||||||||||||| Sbjct: 29022 gttgtgcgcgacgtcgagctgctcca 29047 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 267 cggctcgccgcagaagtagttgtatgagtaggtgaagtt 305 |||||||||| |||||||||||| ||| |||||||||| Sbjct: 28932 cggctcgccggtgaagtagttgtaggagaaggtgaagtt 28970
>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence Length = 196566 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 |||||||||||||||||||||||| Sbjct: 195831 tgtattcatatgtgtatatatata 195854
>gb|AC073021.12| Homo sapiens 3 BAC RP11-250B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183155 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 agtgtattcatatgtgtatatatatac 69 ||||||| ||||||||||||||||||| Sbjct: 118728 agtgtatacatatgtgtatatatatac 118702
>gb|AC023513.21|AC023513 Homo sapiens 12 BAC RP11-440G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117946 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatatatac 69 ||||||||||||||||||||||| Sbjct: 102250 tattcatatgtgtatatatatac 102272
>gb|AC162177.2| Mus musculus BAC clone RP24-159F5 from chromosome 9, complete sequence Length = 148915 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 139042 tattcatatgtgtatatatata 139021
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 gcgcgacgtcgagctgctccag 383 |||||||||||||||||||||| Sbjct: 54582 gcgcgacgtcgagctgctccag 54561
>gb|BC071138.1| Xenopus laevis MGC82305 protein, mRNA (cDNA clone MGC:82305 IMAGE:4033230), complete cds Length = 691 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 436 tattcatatgtgtatatatata 415
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatatacg 70 ||||| |||||||||||||||||||| Sbjct: 116364 tgtatacatatgtgtatatatatacg 116389
>emb|AL807781.6| Human DNA sequence from clone RP11-264P13 on chromosome X Contains the 5' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), a retinoic acid receptor responder (tazarotene induced) 2 (RARRES2) (TIG2) pseudogene and a CpG island, complete sequence Length = 186192 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 agtgtattcatatgtgtatatatata 68 ||||||| |||||||||||||||||| Sbjct: 172712 agtgtatacatatgtgtatatatata 172737
>emb|AL662788.7| Human DNA sequence from clone RP11-778P13 on chromosome 9 Contains part of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 106363 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatatac 69 |||||| ||||||||||||||||||| Sbjct: 7913 gtgtatacatatgtgtatatatatac 7888
>emb|AL513530.8| Human DNA sequence from clone RP11-447M22 on chromosome 6 Contains part of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052), complete sequence Length = 50612 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 42011 tattcatatgtgtatatatata 42032
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12 Contains the C20orf127 locus for a metallothionein protein pseudogene, the MMP24 gene for matrix metalloproteinase 24 (membrane-inserted), a novel gene, the ITGB4BP gene for integrin beta 4 binding protein, the C20orf120 gene for chromosome 20 open reading frame 120, the C20orf128 gene for chromosome 20 open reading frame 128, the 3' end of the C20orf44 gene for chromosome 20 open reading frame 44 and three CpG islands, complete sequence Length = 150481 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 17146 tattcatatgtgtatatatata 17125
>emb|Z98547.2|PFMAL3P3 Plasmodium falciparum MAL3P3, complete sequence Length = 116696 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 5226 tattcatatgtgtatatatata 5247
>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence Length = 158548 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 158274 tattcatatgtgtatatatata 158295
>gb|AC153163.2| Ornithorhynchus anatinus BAC clone OABb-434A1 from chromosome unknown, complete sequence Length = 156066 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 aatgaatgaatttctactagtg 125 |||||||||||||||||||||| Sbjct: 148523 aatgaatgaatttctactagtg 148502
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 285825 tattcatatgtgtatatatata 285804
>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence Length = 123661 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 gtattcatatgtgtatatatat 67 |||||||||||||||||||||| Sbjct: 48856 gtattcatatgtgtatatatat 48835
>gb|AE009622.1| Brucella melitensis 16M chromosome I, section 179 of 195 of the complete sequence Length = 14598 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 gcgcgacgtcgagctgctccag 383 |||||||||||||||||||||| Sbjct: 14102 gcgcgacgtcgagctgctccag 14123
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence Length = 155873 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 gtattcatatgtgtatatatat 67 |||||||||||||||||||||| Sbjct: 109321 gtattcatatgtgtatatatat 109300
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 gcgcgacgtcgagctgctccag 383 |||||||||||||||||||||| Sbjct: 54257 gcgcgacgtcgagctgctccag 54236
>emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on chromosome 9, complete sequence Length = 176584 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatatata 68 |||||||||||||||||||||| Sbjct: 110975 tattcatatgtgtatatatata 110954
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 gcgcgacgtcgagctgctccag 383 |||||||||||||||||||||| Sbjct: 50658 gcgcgacgtcgagctgctccag 50637
>ref|XM_480099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2274 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 ccggtatgtgtccggtgagctcgttgtgc 363 ||||||| | ||||||||||||||||||| Sbjct: 1669 ccggtatctctccggtgagctcgttgtgc 1641
>ref|XM_471735.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 675 ggccgctggtccggccggccg 655
>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence Length = 190884 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 83816 gtgtatacatatgtgtatatatata 83840
>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence Length = 183993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 88952 attcatatgtgtatatatata 88972
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence Length = 254081 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 150183 attcatatgtgtatatatata 150163
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 83696 ggccgctggtccggccggccg 83676
>ref|NM_024109.2| Homo sapiens chromosome 16 open reading frame 68 (C16orf68), mRNA Length = 1570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgagctgctccagcgcgtgca 391 ||||||||||||||||||||| Sbjct: 1372 cgagctgctccagcgcgtgca 1352
>gb|AC006804.3| Caenorhabditis elegans cosmid Y53G8B, complete sequence Length = 31636 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 19845 attcatatgtgtatatatata 19825
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 52891 attcatatgtgtatatatata 52871
>gb|AC006324.3| Homo sapiens PAC clone RP5-1164F5 from 7, complete sequence Length = 157310 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 85032 gtgtatacatatgtgtatatatata 85008
>gb|AY282806.1| Homo sapiens transmembrane protein SHREW1 mRNA, complete cds Length = 2910 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 2714 tgtatgcatatgtgtatatatatac 2690
>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete sequence Length = 162663 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 45250 gtgtatgcatatgtgtatatatata 45274
>gb|AC139214.12| Mus musculus chromosome 17, clone RP23-345D6, complete sequence Length = 286283 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatatat 67 ||||||||||||||||||||| Sbjct: 104730 tattcatatgtgtatatatat 104750
>gb|AC102399.11| Mus musculus chromosome 3, clone RP24-217J3, complete sequence Length = 168566 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 47691 gtgtatacatatgtgtatatatata 47715
>emb|AL355977.11| Human DNA sequence from clone RP11-735G18 on chromosome 10, complete sequence Length = 171367 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 92249 tgtatacatatgtgtatatatatac 92273
>emb|AL354715.10| Human DNA sequence from clone RP11-110G12 on chromosome 13, complete sequence Length = 121019 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||||||||| ||||||||||||| Sbjct: 57965 tgtattcatatatgtatatatatac 57941
>emb|AL137794.5| Human DNA sequence from clone RP5-1070A16 on chromosome 1p21.2-22.2 Contains a novel gene, complete sequence Length = 137895 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatatac 69 ||||||||||||||||||||| Sbjct: 5296 ttcatatgtgtatatatatac 5276
>emb|AL023586.1|HS426F10 Human DNA sequence from clone RP3-426F10 on chromosome 1p36.21-36.33 Contains 3' end of the gene for the transmembrane protein SHREW1, complete sequence Length = 91640 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 49959 tgtatgcatatgtgtatatatatac 49935
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 112218 ggccgctggtccggccggccg 112238 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 111142 ggccgctggtccggccggccg 111122
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 12435 ggccgctggtccggccggccg 12455 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 11359 ggccgctggtccggccggccg 11339
>gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, complete sequence Length = 208510 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 66236 gtgtatacatatgtgtatatatata 66212
>gb|AC160146.10| Mus musculus 10 BAC RP24-421I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167510 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||||||||||||| |||||||| Sbjct: 87876 gtgtattcatatgtgtgtatatata 87900
>gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, complete sequence Length = 151787 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 123330 tgtatacatatgtgtatatatatac 123306
>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence Length = 100233 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 35963 gtgtatacatatgtgtatatatata 35987
>ref|NM_018836.2| Homo sapiens adherens junction associated protein 1 (AJAP1), mRNA Length = 2910 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 2714 tgtatgcatatgtgtatatatatac 2690
>emb|CR621296.1| full-length cDNA clone CS0DC028YE11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1456 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgagctgctccagcgcgtgca 391 ||||||||||||||||||||| Sbjct: 1293 cgagctgctccagcgcgtgca 1273
>emb|CR612148.1| full-length cDNA clone CS0DD001YA13 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1312 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgagctgctccagcgcgtgca 391 ||||||||||||||||||||| Sbjct: 1145 cgagctgctccagcgcgtgca 1125
>emb|CR604742.1| full-length cDNA clone CS0DJ012YD18 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 700 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgagctgctccagcgcgtgca 391 ||||||||||||||||||||| Sbjct: 502 cgagctgctccagcgcgtgca 482
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence Length = 187669 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatatac 69 ||||||||||||||||||||| Sbjct: 127567 ttcatatgtgtatatatatac 127587
>gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, complete sequence Length = 169512 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 49663 attcatatgtgtatatatata 49683
>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence Length = 166745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 140833 attcatatgtgtatatatata 140813
>gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, complete sequence Length = 170282 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 136728 tgtatacatatgtgtatatatatac 136752
>gb|AC087189.3| Homo sapiens chromosome 16 clone RP11-43L5, complete sequence Length = 184877 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 607 gtgtatacatatgtgtatatatata 583
>gb|AC092054.2| Homo sapiens chromosome 3 clone RP11-437I21, complete sequence Length = 165894 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 114847 attcatatgtgtatatatata 114867
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 59894 gtgtatgcatatgtgtatatatata 59870
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 13898555 ggccgctggtccggccggccg 13898575 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggccgctggtccggccggccg 216 ||||||||||||||||||||| Sbjct: 13897479 ggccgctggtccggccggccg 13897459
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 ccggtatgtgtccggtgagctcgttgtgc 363 ||||||| | ||||||||||||||||||| Sbjct: 2766412 ccggtatctctccggtgagctcgttgtgc 2766384
>gb|AC007224.5| Homo sapiens chromosome 16 clone RP11-475D10, complete sequence Length = 185327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgagctgctccagcgcgtgca 391 ||||||||||||||||||||| Sbjct: 47885 cgagctgctccagcgcgtgca 47865
>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111464 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 gagctggttaaagctcacgtc 443 ||||||||||||||||||||| Sbjct: 27812 gagctggttaaagctcacgtc 27792
>gb|AC008069.3| Homo sapiens BAC clone RP11-335I19 from 2, complete sequence Length = 188002 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 |||||| |||||||||||||||||| Sbjct: 27352 tgtatttatatgtgtatatatatac 27328
>gb|AC083871.2|AC083871 Homo sapiens chromosome 7 clone RP11-140I14, complete sequence Length = 150864 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 107816 tgtatgcatatgtgtatatatatac 107840
>gb|AC107308.7| Homo sapiens 12 BAC RP11-677M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98485 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatatac 69 ||||||||||||||||||||| Sbjct: 46501 ttcatatgtgtatatatatac 46521
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 ||||||| ||||||||||||||||| Sbjct: 62787 gtgtatttatatgtgtatatatata 62763
>gb|AC073052.5| Homo sapiens BAC clone RP11-92F20 from 2, complete sequence Length = 127070 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 3191 gtgtatacatatgtgtatatatata 3167
>gb|AC009142.13| Homo sapiens chromosome 16 clone RP11-543N12, complete sequence Length = 195848 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 153171 gtgtatacatatgtgtatatatata 153147
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaagcgccgtgcaccgctccg 268 ||||||||||||||||||||| Sbjct: 1628961 gaagcgccgtgcaccgctccg 1628941
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 ccggtatgtgtccggtgagctcgttgtgc 363 ||||||| | ||||||||||||||||||| Sbjct: 29561 ccggtatctctccggtgagctcgttgtgc 29533
>dbj|AK105581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E05, full insert sequence Length = 1568 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 ccggtatgtgtccggtgagctcgttgtgc 363 ||||||| | ||||||||||||||||||| Sbjct: 498 ccggtatctctccggtgagctcgttgtgc 470
>emb|AL163153.4|CNS01RIE Human chromosome 14 DNA sequence BAC R-16O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166562 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 117507 gtgtatacatatgtgtatatatata 117483
>gb|AC133175.4| Mus musculus BAC clone RP24-62B8 from chromosome 10, complete sequence Length = 180058 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 47903 tgtatacatatgtgtatatatatac 47879
>gb|AF052143.1|AF052143 Homo sapiens clone 24466 mRNA sequence Length = 1490 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatatac 69 ||||| ||||||||||||||||||| Sbjct: 1263 tgtatgcatatgtgtatatatatac 1239
>gb|AC121792.3| Mus musculus BAC clone RP23-404J7 from 3, complete sequence Length = 191723 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 132211 gtgtatacatatgtgtatatatata 132235
>emb|CT025668.10| Mouse DNA sequence from clone RP24-370M11 on chromosome 17, complete sequence Length = 230212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 39782 attcatatgtgtatatatata 39762
>emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chromosome 13, complete sequence Length = 202072 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 197550 gtgtatacatatgtgtatatatata 197574
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 tccgccggccgctggtccggc 210 ||||||||||||||||||||| Sbjct: 1407739 tccgccggccgctggtccggc 1407719
>emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chromosome 4, complete sequence Length = 204428 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatata 68 |||||| |||||||||||||||||| Sbjct: 192311 gtgtatacatatgtgtatatatata 192287
>emb|AL732526.8| Mouse DNA sequence from clone RP23-338O4 on chromosome 2, complete sequence Length = 165825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 gcagaagtagttgtatgagta 296 ||||||||||||||||||||| Sbjct: 115602 gcagaagtagttgtatgagta 115622
>emb|X69299.1|HSFECHPS H.sapiens FECH pseudogene for ferrochelatase Length = 2874 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatata 68 ||||||||||||||||||||| Sbjct: 102 attcatatgtgtatatatata 122
>gb|AC118246.15| Mus musculus chromosome 3, clone RP23-302N4, complete sequence Length = 157517 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 66982 tattcatatgtgtatatata 67001
>ref|XM_463918.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2037 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 caccgctccggctcgccgcagaag 282 |||||||||||||||||| ||||| Sbjct: 176 caccgctccggctcgccggagaag 153
>ref|NM_193527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gcgcgacgtcgagctgctcc 381 |||||||||||||||||||| Sbjct: 957 gcgcgacgtcgagctgctcc 976
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 134805 tgtatacatatgtgtatatatata 134828
>gb|AF107258.1| Homo sapiens chromosome 21q22.1 PAC 295E05A, complete sequence Length = 154311 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 103297 attcatatgtgtatatatat 103278
>gb|AC118250.12| Mus musculus chromosome 15, clone RP23-412A24, complete sequence Length = 166986 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 150001 ttcatatgtgtatatatata 149982
>gb|AC118069.8| Rattus norvegicus 9 BAC CH230-343O14 (Children's Hospital Oakland Research Institute) complete sequence Length = 179244 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 81095 ttcatatgtgtatatatata 81076
>ref|XM_418610.1| PREDICTED: Gallus gallus similar to AF-10 protein (LOC420509), mRNA Length = 4289 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcagccgtgcccgtcgcagt 154 |||||||||||||||||||| Sbjct: 747 gcagccgtgcccgtcgcagt 728
>gb|AC091322.8| Mus musculus chromosome 3, clone RP23-60D3, complete sequence Length = 233938 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 140982 tattcatatgtgtatatata 140963
>gb|AC134910.5| Mus musculus BAC clone RP23-405O11 from chromosome 5, complete sequence Length = 200538 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 acagtgtattcatatgtgta 60 |||||||||||||||||||| Sbjct: 23950 acagtgtattcatatgtgta 23969
>gb|AC107671.7| Mus musculus chromosome 7, clone RP23-112C18, complete sequence Length = 202894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatata 64 |||||||||||||||||||| Sbjct: 37645 tgtattcatatgtgtatata 37626
>gb|AC127028.18| Mus musculus chromosome 18, clone RP23-345J21, complete sequence Length = 191473 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 18635 tcatatgtgtatatatatac 18616
>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence Length = 221662 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 ||||||||||||||| | |||||||||| Sbjct: 218834 acagtgtattcatatatatatatatata 218807
>gb|AC144794.2| Mus musculus BAC clone RP24-463B6 from chromosome 18, complete sequence Length = 152588 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 9497 tattcatatgtgtatatata 9516
>gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosome 12, complete sequence Length = 183898 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 99754 tgtatacatatgtgtatatatata 99777
>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence Length = 207264 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 154224 tattcatatgtgtatatata 154205
>gb|BC103725.1| Homo sapiens cDNA clone IMAGE:5784399, with apparent retained intron Length = 1697 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gagctgctccagcgcgtgca 391 |||||||||||||||||||| Sbjct: 1485 gagctgctccagcgcgtgca 1466
>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence Length = 175471 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 |||||||| |||||||||||| |||||| Sbjct: 115384 acagtgtactcatatgtgtatgtatata 115357
>gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosome 9, complete sequence Length = 237322 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 87875 catatgtgtatatatatacg 87894
>gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, complete sequence Length = 176055 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 32248 tgtatacatatgtgtatatatata 32271
>gb|AC004931.1| Homo sapiens PAC clone RP5-922I23 from 7, complete sequence Length = 145844 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 44111 ttcatatgtgtatatatata 44092
>gb|AC069279.6| Homo sapiens BAC clone CTD-2031I8 from 7, complete sequence Length = 103898 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||||||| |||||||| Sbjct: 63787 tgtattcatatgtgtttatatata 63810
>gb|AC107741.15| Mus musculus chromosome 3, clone RP23-335P23, complete sequence Length = 212995 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 106184 gtgtatacatatgtgtatatatat 106207
>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence Length = 168474 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 80851 tgtatgcatatgtgtatatatata 80828
>gb|AC123950.3| Mus musculus BAC clone RP23-162I9 from chromosome 18, complete sequence Length = 181095 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 42450 tattcatatgtgtatatata 42431
>gb|AY203956.1| Homo sapiens LP8272 mRNA, complete cds Length = 1083 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gagctgctccagcgcgtgca 391 |||||||||||||||||||| Sbjct: 867 gagctgctccagcgcgtgca 848
>emb|CT025565.5| Mouse DNA sequence from clone RP24-126K5 on chromosome 17, complete sequence Length = 175523 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 61592 ttcatatgtgtatatatata 61611
>gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome 19, complete sequence Length = 217220 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 37440 tcatatgtgtatatatatac 37459
>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete sequence Length = 197211 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||| |||||||||||| Sbjct: 22134 tgtattcatatatgtatatatata 22111
>gb|AC126455.4| Mus musculus BAC clone RP23-260P2 from chromosome 16, complete sequence Length = 197474 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||| |||||||||||| Sbjct: 37192 tgtattcatatatgtatatatata 37215
>gb|AC122367.4| Mus musculus BAC clone RP23-449L24 from chromosome 12, complete sequence Length = 200004 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 170489 tgtatacatatgtgtatatatata 170512
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 5488 tattcatatgtgtatatata 5469
>gb|AC069499.17| Homo sapiens 3 BAC RP11-381E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207942 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 79439 ttcatatgtgtatatatata 79458
>gb|AC122057.3| Mus musculus BAC clone RP24-468F14 from chromosome 9, complete sequence Length = 169815 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 24756 attcatatgtgtatatatat 24775
>gb|AC129851.5| Homo sapiens X BAC RP11-669P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166653 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 54195 ttcatatgtgtatatatata 54214
>gb|AC129772.3| Mus musculus BAC clone RP24-491D10 from chromosome 10, complete sequence Length = 160317 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 ||||||||||||||| | |||||||||| Sbjct: 111523 acagtgtattcatatatatatatatata 111496
>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence Length = 181200 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||| |||||||||||| Sbjct: 59037 tgtattcatatttgtatatatata 59014
>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence Length = 209066 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 ||||||||||||||| | |||||||||| Sbjct: 48862 acagtgtattcatatatatatatatata 48835
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence Length = 193725 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 22079 ttcatatgtgtatatatata 22060
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 149697 tcatatgtgtatatatatac 149678
>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence Length = 158243 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 136849 tcatatgtgtatatatatac 136830
>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence Length = 174783 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 49568 tattcatatgtgtatatata 49549
>gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, complete sequence Length = 152119 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 69523 tattcatatgtgtatatata 69504
>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence Length = 228367 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 98369 tgtatacatatgtgtatatatata 98346
>gb|AC130364.5| Homo sapiens chromosome 11, clone RP11-707M1, complete sequence Length = 173032 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 116766 tcatatgtgtatatatatac 116747
>gb|AC160106.2| Mus musculus BAC clone RP24-300H23 from chromosome 13, complete sequence Length = 184364 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||||||||||| ||||||||| Sbjct: 20269 gtgtattcatatgtatatatatat 20246
>gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete sequence Length = 117139 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 46858 attcatatgtgtatatatat 46839
>gb|AC159977.4| Mus musculus chromosome 5, clone RP24-121I11, complete sequence Length = 156847 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 acagtgtattcatatgtgta 60 |||||||||||||||||||| Sbjct: 132442 acagtgtattcatatgtgta 132461
>gb|BC001908.1| Homo sapiens chromosome 16 open reading frame 68, mRNA (cDNA clone MGC:2654 IMAGE:3536628), complete cds Length = 1525 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gagctgctccagcgcgtgca 391 |||||||||||||||||||| Sbjct: 1309 gagctgctccagcgcgtgca 1290
>emb|AL596105.5| Human DNA sequence from clone RP11-145J8 on chromosome 10, complete sequence Length = 26517 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||| |||||||||||| Sbjct: 21199 tgtattcatatatgtatatatata 21222
>emb|AL583850.5| Human DNA sequence from clone RP11-430G6 on chromosome 1 Contains the RGS4 gene for regulator of G-protein signalling 4 and the 3' end of the RGS5 gene for regulator of G-protein signalling 5, complete sequence Length = 165329 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 72051 gtgtatacatatgtgtatatatat 72028
>emb|AL390863.9| Human DNA sequence from clone RP11-239J11 on chromosome 1 Contains the 5' end of the HRPT2 gene for hyperparathyroidism 2 (with jaw tumor), the B3GAL2 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase polypeptide 2 and a CpG island, complete sequence Length = 122864 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 42774 ttcatatgtgtatatatata 42755
>gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186117 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatata 64 |||||||||||||||||||| Sbjct: 72881 tgtattcatatgtgtatata 72900
>emb|AL137141.10| Human DNA sequence from clone RP11-139H14 on chromosome 13 Contains the 5' end of the CPB2 gene for carboxypeptidase B2 (plasma, carboxypeptidase U), 2 novel genes, the LCP1 gene for lymphocyte cytosolic protein 1 (L-plastin) and a CpG Island, complete sequence Length = 180680 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 |||||| ||||||||||||||||| Sbjct: 94948 tgtatttatatgtgtatatatata 94971
>emb|AL132660.14|HSDJ249H1 Human DNA sequence from clone RP1-249H1 on chromosome 6q21-22.32 Contains part of a putative novel gene, a ribosomal protein L30 (RPL30) pseudogene, the MARCKS gene for myristoylated alanine-rich protein kinase C substrate (phosphomyristin, MACS, 80K-L, PKCSL, MRACKS, contains FLJ14368 and DKFZp564P1664), and a putative novel gene. Contains 2 CpG islands, complete sequence Length = 55113 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 ||||||||| ||||||||||||||||| Sbjct: 10512 acagtgtatatatatgtgtatatatata 10485
>gb|AC121118.6| Mus musculus, clone RP23-385E21, complete sequence Length = 202500 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tattcatatgtgtatatata 66 |||||||||||||||||||| Sbjct: 15112 tattcatatgtgtatatata 15131
>emb|AL035397.4|HS45P1 Human DNA sequence from clone RP6-45P1 on chromosome 22q11.22-12.3, complete sequence Length = 77601 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 cagtgtattcatatgtgtatatatatac 69 ||||||| |||||| ||||||||||||| Sbjct: 27648 cagtgtaatcatatatgtatatatatac 27621
>emb|AL031116.2|HS878O8 Human DNA sequence from clone RP5-878O8 on chromosome Xq21.1-21.33 Contains the CPXCR1 gene for CPX chromosome region, candidate 1, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 128770 tgtatacatatgtgtatatatata 128793
>emb|AL022154.2|HS249C1 Human DNA sequence from clone RP1-249C1 on chromosome Xq21.1-22.2, complete sequence Length = 118153 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 52 tgtatacatatgtgtatatatata 75
>emb|AL023694.1|HS511E16 Human DNA sequence from clone RP3-511E16 on chromosome 6p24.3-25.1 Contains the 3' end of the EEF1E1 gene for eukaryotic translation elongation factor 1 epsilon 1, the 5' end of gene FLJ21789 for the ortholog of mouse muted and a CpG island, complete sequence Length = 56632 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 47963 gtgtatgcatatgtgtatatatat 47986
>gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, complete sequence Length = 187070 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||||| |||||||||| Sbjct: 159023 tgtattcatatgtatatatatata 159046
>emb|AL772268.6| Mouse DNA sequence from clone RP23-465I4 on chromosome 11 Contains the 5' end of the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, a novel pseudogene and the 3' end of the Sparc gene for secreted acidic cysteine rich glycoprotein, complete sequence Length = 86314 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 79033 tgtatacatatgtgtatatatata 79056 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 78955 tgtatacatatgtgtatatatata 78978
>emb|AJ571701.1|RLE571701 Rhizobium leguminosarum bv. viciae 3841 lipopolysaccharide O-chain biosynthesis gene region Length = 28646 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ccagccgcggcagcgcacag 327 |||||||||||||||||||| Sbjct: 8324 ccagccgcggcagcgcacag 8343
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||||||| ||||||||||||| Sbjct: 15477 gtgtattcatgtgtgtatatatat 15500
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete sequence Length = 218635 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 7100 ttcatatgtgtatatatata 7081
>gb|AC021316.16| Homo sapiens chromosome 15, clone RP11-11J16, complete sequence Length = 173535 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 |||||||||||||||||| ||||| Sbjct: 26721 tgtattcatatgtgtatacatata 26698
>gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, complete sequence Length = 209123 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 51314 ttcatatgtgtatatatata 51333
>gb|AC008609.7| Homo sapiens chromosome 5 clone CTB-127C13, complete sequence Length = 77908 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 23167 attcatatgtgtatatatat 23186
>gb|AC121156.2| Homo sapiens BAC clone RP11-502D7 from 4, complete sequence Length = 84092 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 43256 tgtatacatatgtgtatatatata 43279
>dbj|AK022495.1| Homo sapiens cDNA FLJ12433 fis, clone NT2RM1000032 Length = 1485 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gagctgctccagcgcgtgca 391 |||||||||||||||||||| Sbjct: 1293 gagctgctccagcgcgtgca 1274
>gb|AC099060.2| Homo sapiens chromosome 1 clone RP11-415A20, complete sequence Length = 152692 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 135975 tgtatgcatatgtgtatatatata 135952
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence Length = 160748 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 109004 tgtatacatatgtgtatatatata 109027
>gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, complete sequence Length = 160250 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 44651 tgtatacatatgtgtatatatata 44628
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 25955 catatgtgtatatatatacg 25936
>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194851 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atatgtgtatatatatacga 71 |||||||||||||||||||| Sbjct: 112360 atatgtgtatatatatacga 112379
>gb|AC112179.2| Homo sapiens chromosome 5 clone RP11-116A1, complete sequence Length = 156979 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 25264 tcatatgtgtatatatatac 25245
>gb|AC096592.4| Homo sapiens BAC clone RP11-775M18 from 4, complete sequence Length = 94634 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 35756 tgtatacatatgtgtatatatata 35733
>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete sequence Length = 194702 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 73080 gtgtatacatatgtgtatatatat 73057
>gb|AC090450.6| Homo sapiens chromosome 8, clone RP11-242M12, complete sequence Length = 166686 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 57434 tgtatacatatgtgtatatatata 57457
>gb|AC007992.12| Homo sapiens chromosome 8, clone RP11-44N17, complete sequence Length = 146921 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 42664 catatgtgtatatatatacg 42683
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 23840 tgtatacatatgtgtatatatata 23863
>gb|AC091193.6| Homo sapiens chromosome 8, clone RP11-745K9, complete sequence Length = 142064 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 13068 tgtatgcatatgtgtatatatata 13091
>gb|AC017068.7| Homo sapiens BAC clone RP11-380D23 from 4, complete sequence Length = 201627 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 |||||| ||||||||||||||||| Sbjct: 85020 tgtatttatatgtgtatatatata 85043
>gb|AC008600.7| Homo sapiens chromosome 5 clone CTB-105J5, complete sequence Length = 147114 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 96788 ttcatatgtgtatatatata 96769
>gb|AC022858.8| Homo sapiens chromosome 8, clone RP11-326E22, complete sequence Length = 187340 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 86233 ttcatatgtgtatatatata 86252
>gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromosome 7, complete sequence Length = 165769 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 62406 gtgtatacatatgtgtatatatat 62429
>gb|AC159293.2| Mus musculus BAC clone RP23-282K7 from chromosome 12, complete sequence Length = 181226 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 76978 tgtatgcatatgtgtatatatata 76955
>gb|AF410262.1|AF410262 Microtus guatemalensis cytochrome b (cytb) gene, complete cds; mitochondrial gene for mitochondrial product Length = 1143 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttctactagtgttgtgccaa 134 |||||||||||||||||||| Sbjct: 486 ttctactagtgttgtgccaa 467
>gb|AF410259.1|AF410259 Microtus quasiater cytochrome b (cytb) gene, complete cds; mitochondrial gene for mitochondrial product Length = 1143 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttctactagtgttgtgccaa 134 |||||||||||||||||||| Sbjct: 486 ttctactagtgttgtgccaa 467
>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence Length = 205231 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 141928 ttcatatgtgtatatatata 141909
>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201259 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 tgacagtgtattcatatgtgtatatata 66 |||||||||||| || |||||||||||| Sbjct: 92464 tgacagtgtatttatctgtgtatatata 92491
>gb|AC154567.3| Mus musculus BAC clone RP23-245F1 from chromosome 14, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 64327 catatgtgtatatatatacg 64346
>gb|AC008448.7| Homo sapiens chromosome 5 clone CTC-340N24, complete sequence Length = 156821 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 27155 tcatatgtgtatatatatac 27174
>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence Length = 212696 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||| |||||||||||| Sbjct: 193408 tgtattcatatatgtatatatata 193431
>gb|AC156632.2| Mus musculus BAC clone RP24-511E24 from chromosome 12, complete sequence Length = 173515 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 5154 ttcatatgtgtatatatata 5173
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tgcgcgacgtcgagctgctc 380 |||||||||||||||||||| Sbjct: 1455581 tgcgcgacgtcgagctgctc 1455600
>gb|AC153880.6| Mus musculus 6 BAC RP23-384J7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189970 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 124696 tgtatgcatatgtgtatatatata 124719
>gb|AC159400.2| Physcomitrella patens clone JGIASYB-5P18, complete sequence Length = 34574 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||||||||||| |||||||||| Sbjct: 32954 tgtattcatatgtatatatatata 32977
>emb|CR353773.1| Gallus gallus finished cDNA, clone ChEST931l1 Length = 655 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcagccgtgcccgtcgcagt 154 |||||||||||||||||||| Sbjct: 229 gcagccgtgcccgtcgcagt 210
>gb|AC015998.8|AC015998 Homo sapiens, clone RP11-15J14, complete sequence Length = 156873 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 48504 catatgtgtatatatatacg 48485
>emb|BX248229.14| Zebrafish DNA sequence from clone CH211-126P4 in linkage group 2, complete sequence Length = 180233 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aaatgaatgaatttctacta 122 |||||||||||||||||||| Sbjct: 75801 aaatgaatgaatttctacta 75782
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 caccgctccggctcgccgcagaag 282 |||||||||||||||||| ||||| Sbjct: 1146012 caccgctccggctcgccggagaag 1145989
>gb|AC129935.8| Mus musculus chromosome 15, clone RP23-269P8, complete sequence Length = 183894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 181215 ttcatatgtgtatatatata 181234
>emb|BX247887.6| Zebrafish DNA sequence from clone CH211-142L10, complete sequence Length = 143903 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 attttacaccaccaaatgaa 109 |||||||||||||||||||| Sbjct: 61581 attttacaccaccaaatgaa 61562
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 167797 ttcatatgtgtatatatata 167778
>gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosome 17, complete sequence Length = 182101 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 149108 ttcatatgtgtatatatata 149089
>gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosome 13, complete sequence Length = 201893 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||||||||||| ||||||||| Sbjct: 184080 gtgtattcatatgtatatatatat 184057
>gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosome 12, complete sequence Length = 158411 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 92268 ttcatatgtgtatatatata 92249
>gb|AC156831.2| Mus musculus BAC clone RP24-276N6 from chromosome 9, complete sequence Length = 152361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 acagtgtattcatatgtgta 60 |||||||||||||||||||| Sbjct: 129428 acagtgtattcatatgtgta 129447
>gb|AC004944.1|AC004944 Homo sapiens PAC clone RP5-991O23 from 8, complete sequence Length = 133258 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 3613 tgtatgcatatgtgtatatatata 3590
>gb|AF275631.1|AF275631 Phanerochaete chrysosporium lipE/lipA intergenic region Length = 13152 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gctcgttgtgcgcgacgtcg 372 |||||||||||||||||||| Sbjct: 5300 gctcgttgtgcgcgacgtcg 5319
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gcgcgacgtcgagctgctcc 381 |||||||||||||||||||| Sbjct: 66387 gcgcgacgtcgagctgctcc 66368
>emb|BX933141.1| Gallus gallus finished cDNA, clone ChEST1013a1 Length = 752 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcagccgtgcccgtcgcagt 154 |||||||||||||||||||| Sbjct: 208 gcagccgtgcccgtcgcagt 189
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gtcgagctgctccagcgcgt 388 |||||||||||||||||||| Sbjct: 7400957 gtcgagctgctccagcgcgt 7400938
>gb|AC137810.3| Homo sapiens chromosome 5 clone XXfos-102B1, complete sequence Length = 43668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 13712 catatgtgtatatatatacg 13731
>gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, complete sequence Length = 185252 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 62761 tgtatacatatgtgtatatatata 62784
>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete sequence Length = 213098 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 87352 gtgtatacatatgtgtatatatat 87375
>gb|AC135377.3| Mus musculus BAC clone RP24-66B2 from chromosome 19, complete sequence Length = 179745 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tcatatgtgtatatatatac 69 |||||||||||||||||||| Sbjct: 5289 tcatatgtgtatatatatac 5270
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 caccgctccggctcgccgcagaag 282 |||||||||||||||||| ||||| Sbjct: 98536 caccgctccggctcgccggagaag 98513
>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete sequences Length = 183155 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 135088 attcatatgtgtatatatat 135069
>gb|AC004093.1|AC004093 Mus musculus (129SV) DNA, unmapped BAC 10817, complete sequence Length = 157684 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 acagtgtattcatatgtgta 60 |||||||||||||||||||| Sbjct: 120735 acagtgtattcatatgtgta 120754
>dbj|AK110925.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D07, full insert sequence Length = 2037 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 caccgctccggctcgccgcagaag 282 |||||||||||||||||| ||||| Sbjct: 176 caccgctccggctcgccggagaag 153
>gb|AC005233.2|AC005233 Homo sapiens PAC clone RP5-1198O21 from Ch22, complete sequence Length = 64359 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 25746 gtgtatacatatgtgtatatatat 25769
>emb|AL021231.1|HS249C1T H.sapiens STS from genomic clone 249C1 Length = 1000 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 52 tgtatacatatgtgtatatatata 75
>gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, complete sequence Length = 213782 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 211246 ttcatatgtgtatatatata 211265
>gb|AC152983.2| Mus musculus 10 BAC RP23-17L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224120 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgtatatatata 68 ||||||||||||||| | |||||||||| Sbjct: 163 acagtgtattcatatatatatatatata 136
>dbj|AP000237.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-269P7, complete sequence Length = 153265 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 137337 attcatatgtgtatatatat 137318
>dbj|AP001706.1| Homo sapiens genomic DNA, chromosome 21q, section 50/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 164583 attcatatgtgtatatatat 164564
>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete sequence Length = 215177 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 84739 gtgtatacatatgtgtatatatat 84716
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 125046 gtgtatgcatatgtgtatatatat 125023
>gb|AC156793.3| Mus musculus BAC clone RP24-148D3 from chromosome 9, complete sequence Length = 198338 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 acagtgtattcatatgtgta 60 |||||||||||||||||||| Sbjct: 152118 acagtgtattcatatgtgta 152099
>gb|AC111082.23| Mus musculus chromosome 17, clone RP23-140I9, complete sequence Length = 171550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 39186 ttcatatgtgtatatatata 39205
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 157562 tgtatgcatatgtgtatatatata 157585
>emb|CT010509.10| Mouse DNA sequence from clone RP23-63E8 on chromosome 9, complete sequence Length = 258170 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 223573 attcatatgtgtatatatat 223592
>emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chromosome 9, complete sequence Length = 238033 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 catatgtgtatatatatacg 70 |||||||||||||||||||| Sbjct: 201332 catatgtgtatatatatacg 201351
>emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chromosome 17, complete sequence Length = 195684 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 tgtattcatatgtgtatatatata 68 ||||| |||||||||||||||||| Sbjct: 171855 tgtatgcatatgtgtatatatata 171832
>emb|AL732456.6| Mouse DNA sequence from clone RP23-405D18 on chromosome X, complete sequence Length = 136482 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 45010 ttcatatgtgtatatatata 44991
>emb|AL606516.3| Human DNA sequence from clone RP11-87M18 on chromosome X, complete sequence Length = 90945 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 53094 gtgtatacatatgtgtatatatat 53117
>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete sequence Length = 232834 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ttcatatgtgtatatatata 68 |||||||||||||||||||| Sbjct: 128378 ttcatatgtgtatatatata 128397
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete sequence Length = 218939 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gtgtattcatatgtgtatatatat 67 |||||| ||||||||||||||||| Sbjct: 47683 gtgtatacatatgtgtatatatat 47660
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tatgtgtatatatatacgac 72 |||||||||||||||||||| Sbjct: 100777 tatgtgtatatatatacgac 100796
>dbj|AP000196.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 2/8, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 74437 attcatatgtgtatatatat 74456
>dbj|AP000092.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 2/7 Length = 100000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 attcatatgtgtatatatat 67 |||||||||||||||||||| Sbjct: 74437 attcatatgtgtatatatat 74456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,320,943 Number of Sequences: 3902068 Number of extensions: 4320943 Number of successful extensions: 224529 Number of sequences better than 10.0: 240 Number of HSP's better than 10.0 without gapping: 243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 222539 Number of HSP's gapped (non-prelim): 1986 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
