Clone Name | rbart13a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase I... | 30 | 2.8 | 2 | VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprot... | 30 | 3.6 | 3 | AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 1... | 30 | 4.7 |
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>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 30.4 bits (67), Expect = 2.8 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -2 Query: 123 YFFFLRIPRYITTWVYVLLCLFVSLFARV 37 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085
>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;| Nonstructural protein NS-M; Glycoprotein G1] Length = 1441 Score = 30.0 bits (66), Expect = 3.6 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -2 Query: 129 ISYFFFLRIPRYITTWVYVLLCLFVSL--------FARVGRLYEQQCDVF 4 I++++F+ I Y TW +++ L + L F+ + +Y ++CD++ Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 29.6 bits (65), Expect = 4.7 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -2 Query: 123 YFFFLRIPRYITTWVYVLLCLFVSLFARV 37 YF F ++ ++TW+ ++L +F+SLF + Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,018,131 Number of Sequences: 219361 Number of extensions: 857882 Number of successful extensions: 2735 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2381 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2687 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)