ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart12h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009279.1| Triticum aestivum clone wlk8.pk0021.b11:fis, full insert mRNA sequence Length = 619 Score = 617 bits (311), Expect = e-173 Identities = 335/343 (97%) Strand = Plus / Minus Query: 170 cggagctctagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccac 229 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 cggagttctagacttcaaggtacttgctggctgtgtggacatccttgtctcctcttccac 322 Query: 230 tgcagttcagaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaag 289 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 321 tgcagttgagaaccaccctcacaccatccggtagtgttgggcagagcttctccaggtaag 262 Query: 290 ccagggcgtgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttga 349 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 261 ccagcgcgtgggatgtctccagggcagggatgatgccctccagccgagaggtgcgcttga 202 Query: 350 aagcatccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctca 409 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 201 aagcgtccaatgcctcctgatctgtcacactatcatattcagcacgtccaatatccctca 142 Query: 410 agaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggct 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 agaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggct 82 Query: 470 caatcacttgtccatcagcatcctgcaatacataactcagaga 512 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 caatcacttgtccatcagcatcctgcaatacataactcagaga 39 Score = 145 bits (73), Expect = 2e-31 Identities = 115/124 (92%), Gaps = 5/124 (4%) Strand = Plus / Minus Query: 4 ggcacacaacgagcctttatttataccaagtttaacatacaacatatttttatt-acata 62 |||||| |||||||||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 594 ggcacaaaacgagcctttattta--ccaagtttagcatacaacatatttttatttagata 537 Query: 63 taaattcaaaaaaccaaactaaattagcttatagaccaaccgacttccaggattatttgt 122 |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 536 -aaattcaacaaaccaaactaaattagct-atagaccaaccgacttccaggattatttgt 479 Query: 123 accc 126 |||| Sbjct: 478 accc 475
>dbj|AK060205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A05, full insert sequence Length = 1183 Score = 408 bits (206), Expect = e-111 Identities = 299/330 (90%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 893 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 892 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 833 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcca 358 |||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 832 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagcatcca 773 Query: 359 atgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaactat 418 ||||||||| ||||||||||| |||||||||||||||||||||||| |||| || |||| Sbjct: 772 gtgcctcctgatctgtcacactgtcatattcagcacgtccaatatccttcaaaaagctat 713 Query: 419 gctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcactt 478 ||||||| |||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||| Sbjct: 712 gctcaggcccaacaccagggtagtccagcccagcactaatggagtggggttcaataactt 653 Query: 479 gtccatcagcatcctgcaatacataactca 508 |||||||| |||||||||| ||||| |||| Sbjct: 652 gtccatcatcatcctgcaacacatagctca 623
>dbj|AK072535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133G14, full insert sequence Length = 1700 Score = 402 bits (203), Expect = e-109 Identities = 299/331 (90%) Strand = Plus / Minus Query: 178 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 1411 Query: 238 agaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcg 297 | ||||||||||| || || ||||| ||||||||||||||||||||||| || || || Sbjct: 1410 accaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgca 1351 Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcc 357 ||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1350 tgggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagcatcc 1291 Query: 358 aatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaacta 417 | ||||||||| |||||||| || |||||||||||||||||||||||| |||| || ||| Sbjct: 1290 agtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaaagcta 1231 Query: 418 tgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcact 477 |||||||| |||||||| ||||| |||| ||||||||| ||||||||||| ||||| ||| Sbjct: 1230 tgctcaggcccaacaccagggtagtccagcccagcactaatggagtggggttcaataact 1171 Query: 478 tgtccatcagcatcctgcaatacataactca 508 ||||||||| |||||||||| ||||| |||| Sbjct: 1170 tgtccatcatcatcctgcaacacatagctca 1140
>ref|XM_479974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 400 bits (202), Expect = e-108 Identities = 298/330 (90%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1469 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 1410 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 1409 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 1350 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcca 358 |||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 1349 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagcatcca 1290 Query: 359 atgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaactat 418 ||||||||| |||||||| || |||||||||||||||||||||||| |||| || |||| Sbjct: 1289 gtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaaagctat 1230 Query: 419 gctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcactt 478 ||||||| |||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||| Sbjct: 1229 gctcaggcccaacaccagggtagtccagcccagcactaatggagtggggttcaataactt 1170 Query: 479 gtccatcagcatcctgcaatacataactca 508 |||||||| |||||||||| ||||| |||| Sbjct: 1169 gtccatcatcatcctgcaacacatagctca 1140
>dbj|AK069187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G22, full insert sequence Length = 1027 Score = 400 bits (202), Expect = e-108 Identities = 298/330 (90%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 607 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 606 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 547 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcca 358 |||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 546 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagcatcca 487 Query: 359 atgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaactat 418 ||||||||| |||||||| || |||||||||||||||||||||||| |||| || |||| Sbjct: 486 gtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaaagctat 427 Query: 419 gctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcactt 478 ||||||| |||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||| Sbjct: 426 gctcaggcccaacaccagggtagtccagcccagcactaatggagtggggttcaataactt 367 Query: 479 gtccatcagcatcctgcaatacataactca 508 |||||||| |||||||||| ||||| |||| Sbjct: 366 gtccatcatcatcctgcaacacatagctca 337
>gb|BT016988.1| Zea mays clone EK07D2304D07.c mRNA sequence Length = 989 Score = 315 bits (159), Expect = 8e-83 Identities = 279/319 (87%) Strand = Plus / Plus Query: 178 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 237 ||||| || |||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 234 tagacgtccaggtacttgctggcggtgtgcacgtccttgtctcctcgcccgctgcagttc 293 Query: 238 agaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcg 297 | ||||||||||| || |||| |||||| |||||||||||||| ||||| ||||| ||| Sbjct: 294 accaccaccctcacgccgtccgccagtgtcgggcagagcttctcaaggtaggccagcgcg 353 Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcc 357 ||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct: 354 tgggaggtctccagggcagggatgatgccctccaaccgagacacgcgcttgaaagcatcc 413 Query: 358 aatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaacta 417 | |||||||||||| ||||||||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 414 agtgcctcctggtcagtcacactatcgtattcggcacgtccaatgtccttcaagaaactg 473 Query: 418 tgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcact 477 ||||| |||||||| || |||||||| | ||||||||||||||||||||| || || ||| Sbjct: 474 tgctcgggtccaacgccagggtaatcgagcccagcactgatggagtggggttcgataact 533 Query: 478 tgtccatcagcatcctgca 496 ||||| ||| ||||||||| Sbjct: 534 tgtccgtcatcatcctgca 552
>gb|M76685.1|MZEORP2A Zea mays tryptophan synthase beta-subunit (TSB2) mRNA, complete cds Length = 1540 Score = 315 bits (159), Expect = 8e-83 Identities = 279/319 (87%) Strand = Plus / Minus Query: 178 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 237 ||||| || |||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 1333 tagacgtccaggtacttgctggcggtgtgcacgtccttgtctcctcgcccgctgcagttc 1274 Query: 238 agaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcg 297 | ||||||||||| || |||| |||||| |||||||||||||| ||||| ||||| ||| Sbjct: 1273 accaccaccctcacgccgtccgccagtgtcgggcagagcttctcaaggtaggccagcgcg 1214 Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcatcc 357 ||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct: 1213 tgggaggtctccagggcagggatgatgccctccaaccgagacacgcgcttgaaagcatcc 1154 Query: 358 aatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaacta 417 | |||||||||||| ||||||||||| ||||| ||||||||||| ||| |||||||||| Sbjct: 1153 agtgcctcctggtcagtcacactatcgtattcggcacgtccaatgtccttcaagaaactg 1094 Query: 418 tgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatcact 477 ||||| |||||||| || |||||||| | ||||||||||||||||||||| || || ||| Sbjct: 1093 tgctcgggtccaacgccagggtaatcgagcccagcactgatggagtggggttcgataact 1034 Query: 478 tgtccatcagcatcctgca 496 ||||| ||| ||||||||| Sbjct: 1033 tgtccgtcatcatcctgca 1015
>gb|AY104030.1| Zea mays PCO122526 mRNA sequence Length = 1434 Score = 289 bits (146), Expect = 4e-75 Identities = 269/310 (86%) Strand = Plus / Minus Query: 176 tctagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagt 235 ||||||| || |||||||||||||| ||||| || |||||||| |||| |||||||||| Sbjct: 1219 tctagacgtccaggtacttgctggcggtgtgcacgtccttgtcgcctcgcccactgcagt 1160 Query: 236 tcagaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccaggg 295 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| || || | Sbjct: 1159 tcagcaccaccctcacgccgtccggcagggtcgggcacagcttctccaggtaggcgagcg 1100 Query: 296 cgtgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcat 355 ||||||| ||||||||||| ||||||||||| ||||| || ||| |||||||||||||| Sbjct: 1099 cgtgggaggtctccagggccgggatgatgccctccagacgggagacgcgcttgaaagcat 1040 Query: 356 ccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaac 415 ||| ||||||||| || ||||| || ||||||||||| ||||| || ||| ||||||||| Sbjct: 1039 ccagtgcctcctgatcagtcacgctgtcatattcagcgcgtccgatgtccttcaagaaac 980 Query: 416 tatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatca 475 | |||||||||||||| || |||||||||| ||||||||||||||||||||||| || | Sbjct: 979 tgtgctcaggtccaacgccagggtaatccagtccagcactgatggagtggggctcgataa 920 Query: 476 cttgtccatc 485 |||| ||||| Sbjct: 919 cttgcccatc 910
>gb|M76684.1|MZEORP1A Zea mays tryptophan synthase beta-subunit (TSB1) mRNA, complete cds Length = 1382 Score = 289 bits (146), Expect = 4e-75 Identities = 269/310 (86%) Strand = Plus / Minus Query: 176 tctagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagt 235 ||||||| || ||||||||||| || ||||| || |||||||| |||| |||||||||| Sbjct: 1171 tctagacgtccaggtacttgctagcggtgtgcacgtccttgtcgcctcgcccactgcagt 1112 Query: 236 tcagaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccaggg 295 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| || || | Sbjct: 1111 tcagcaccaccctcacgccgtccggcagggtcgggcacagcttctccaggtaggcgagcg 1052 Query: 296 cgtgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagcat 355 ||||||| ||||||||||| ||||||||||| ||||| || ||| |||||||||||||| Sbjct: 1051 cgtgggaggtctccagggccgggatgatgccctccagacgggagacgcgcttgaaagcat 992 Query: 356 ccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaagaaac 415 ||| ||||||||| || ||||| || ||||||||||| ||||| || ||| ||||||||| Sbjct: 991 ccagtgcctcctgatcagtcacgctgtcatattcagcgcgtccgatgtccttcaagaaac 932 Query: 416 tatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctcaatca 475 |||||||||||||||| || |||||||||| ||||||||||||||||||||||| || | Sbjct: 931 tatgctcaggtccaacgccagggtaatccagtccagcactgatggagtggggctcgataa 872 Query: 476 cttgtccatc 485 |||| ||||| Sbjct: 871 cttgcccatc 862
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 228 bits (115), Expect = 1e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2026475 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 2026416 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 2026415 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 2026356 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 |||| |||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 2026355 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagc 2026301 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| ||||||||| |||||||| || |||||||||||||||||||||||| |||| | Sbjct: 2025569 catccagtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaa 2025510 Query: 413 aactatgctcaggtccaacacctgggtaatcca 445 | ||||||||||| |||||||| ||||| |||| Sbjct: 2025509 agctatgctcaggcccaacaccagggtagtcca 2025477 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgcaatacataac 505 |||||||||| ||||||||||| ||||| |||||||||||| |||||||||| ||||| | Sbjct: 2025395 acccagcactaatggagtggggttcaataacttgtccatcatcatcctgcaacacatagc 2025336 Query: 506 tca 508 ||| Sbjct: 2025335 tca 2025333
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 228 bits (115), Expect = 1e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20005 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 19946 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 19945 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 19886 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 |||| |||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 19885 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagc 19831 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| ||||||||| |||||||| || |||||||||||||||||||||||| |||| | Sbjct: 19099 catccagtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaa 19040 Query: 413 aactatgctcaggtccaacacctgggtaatcca 445 | ||||||||||| |||||||| ||||| |||| Sbjct: 19039 agctatgctcaggcccaacaccagggtagtcca 19007 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgcaatacataac 505 |||||||||| ||||||||||| ||||| |||||||||||| |||||||||| ||||| | Sbjct: 18925 acccagcactaatggagtggggttcaataacttgtccatcatcatcctgcaacacatagc 18866 Query: 506 tca 508 ||| Sbjct: 18865 tca 18863
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 228 bits (115), Expect = 1e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 179 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151673 agacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttca 151614 Query: 239 gaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcgt 298 ||||||||||| || || ||||| ||||||||||||||||||||||| || || || | Sbjct: 151613 ccaccaccctcacgccgtcgggcagcgttgggcagagcttctccaggtaggcgagcgcat 151554 Query: 299 gggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 |||| |||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 151553 gggacgtctccagagcagggatgatgccctccagccgagagacgcgcttgaaagc 151499 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Minus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| ||||||||| |||||||| || |||||||||||||||||||||||| |||| | Sbjct: 150767 catccagtgcctcctgatctgtcacgctgtcatattcagcacgtccaatatccttcaaaa 150708 Query: 413 aactatgctcaggtccaacacctgggtaatcca 445 | ||||||||||| |||||||| ||||| |||| Sbjct: 150707 agctatgctcaggcccaacaccagggtagtcca 150675 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgcaatacataac 505 |||||||||| ||||||||||| ||||| |||||||||||| |||||||||| ||||| | Sbjct: 150593 acccagcactaatggagtggggttcaataacttgtccatcatcatcctgcaacacatagc 150534 Query: 506 tca 508 ||| Sbjct: 150533 tca 150531
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 167 bits (84), Expect = 4e-38 Identities = 153/176 (86%) Strand = Plus / Plus Query: 178 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 237 ||||| || |||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 72762 tagacgtccaggtacttgctggcggtgtgcacgtccttgtctcctcgcccgctgcagttc 72821 Query: 238 agaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcg 297 | ||||||||||| || |||| |||||| |||||||||||||| ||||| ||||| ||| Sbjct: 72822 accaccaccctcacgccgtccgccagtgtcgggcagagcttctcaaggtaggccagcgcg 72881 Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct: 72882 tgggaggtctccagggcagggatgatgccctccaaccgagacacgcgcttgaaagc 72937 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| |||||||||||| ||||||||||| ||||| ||||||||||| ||| |||||| Sbjct: 73441 catccagtgcctcctggtcagtcacactatcgtattcggcacgtccaatgtccttcaaga 73500 Query: 413 aactatgctcaggtccaacacctgggtaatc 443 |||| ||||| |||||||| || |||||||| Sbjct: 73501 aactgtgctcgggtccaacgccagggtaatc 73531 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgca 496 |||||||||||||||||||||| || || |||||||| ||| ||||||||| Sbjct: 73625 acccagcactgatggagtggggttcgataacttgtccgtcatcatcctgca 73675
>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence Length = 181627 Score = 163 bits (82), Expect = 7e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 176 tctagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagt 235 ||||||| || |||||||||||||| ||||| || |||||||| |||| |||||||||| Sbjct: 78208 tctagacgtccaggtacttgctggcggtgtgcacgtccttgtcgcctcgcccactgcagt 78267 Query: 236 tcagaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccaggg 295 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| || || | Sbjct: 78268 tcagcaccaccctcacgccgtccggcagggtcgggcacagcttctccaggtaggcgagcg 78327 Query: 296 cgtgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||||| ||||||||||| ||||||||||| ||||| || ||| |||||||||||| Sbjct: 78328 cgtgggaggtctccagggccgggatgatgccctccagacgggagacgcgcttgaaagc 78385 Score = 89.7 bits (45), Expect = 8e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| ||||||||| || ||||| || ||||||||||| ||||| || ||| |||||| Sbjct: 79090 catccagtgcctcctgatcagtcacgctgtcatattcagcgcgtccgatgtccttcaaga 79149 Query: 413 aactatgctcaggtccaacacctgggtaatcca 445 |||| |||||||||||||| || |||||||||| Sbjct: 79150 aactgtgctcaggtccaacgccagggtaatcca 79182 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatc 485 ||||||||||||||||||||||||| || ||||| ||||| Sbjct: 79256 acccagcactgatggagtggggctcgataacttgcccatc 79295
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Plus Query: 178 tagacatcaaggtacttgctggctgtgtggacatccttgtctcctcttccactgcagttc 237 ||||| || |||||||||||||| ||||| || ||||||||||||| ||||||||||||| Sbjct: 67562 tagacgtccaggtacttgctggcggtgtgcacgtccttgtctcctcgtccactgcagttc 67621 Query: 238 agaaccaccctcacaccatccggcagtgttgggcagagcttctccaggtaagccagggcg 297 | ||||| ||||| || || ||||| || |||||||||||||| ||||| || || || Sbjct: 67622 accaccactctcacgccgtctggcagggtcgggcagagcttctcgaggtaggcgagcgca 67681 Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 67682 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 67737 Score = 89.7 bits (45), Expect = 8e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 353 catccaatgcctcctggtctgtcacactatcatattcagcacgtccaatatccctcaaga 412 |||||| ||||||||| || ||||| || || ||||||||||||||||| ||| |||||| Sbjct: 68445 catccagtgcctcctgatcagtcacgctgtcgtattcagcacgtccaatgtccttcaaga 68504 Query: 413 aactatgctcaggtccaacacctgggtaatcca 445 |||| ||||| ||||||||||| ||||| |||| Sbjct: 68505 aactgtgctcgggtccaacaccagggtagtcca 68537 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgca 496 |||||||||||||||||||||| ||||| |||||||||||| | ||||||| Sbjct: 68620 acccagcactgatggagtggggttcaataacttgtccatcatcgtcctgca 68670
>dbj|AB003491.1| Oryza sativa mRNA for tryptophan synthase B, complete cds Length = 1413 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 377 cactatcatattcagcacgtccaatatccctcaagaaactatgctcaggtccaacacctg 436 ||||||| |||||||| ||||| || || | | |||||| ||||| ||||| || || | Sbjct: 1213 cactatcgtattcagcccgtcccatgtctttaacgaaactgtgctcgggtccgactccgg 1154 Query: 437 ggtaatccaacccagcactgatggagtggggctcaatcacttgtccatcagcatcctgca 496 |||| |||||||||||||| |||||||| || ||||| |||||||||||| |||| |||| Sbjct: 1153 ggtagtccaacccagcactaatggagtgtggttcaatgacttgtccatcatcatcttgca 1094 Query: 497 a 497 | Sbjct: 1093 a 1093
>ref|NM_118841.2| Arabidopsis thaliana TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT); tryptophan synthase AT4G27070 (TSB2) mRNA, complete cds Length = 1698 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctc 470 |||||||||||||||||| || || ||||| ||||| || |||||||||||||| || || Sbjct: 1264 gaaactatgctcaggtccgactccagggtagtccaatccggcactgatggagtgtggttc 1205 Query: 471 aatcacttgtccatcagcatcctgca 496 ||| | ||| |||||| |||| |||| Sbjct: 1204 aatgatttggccatcatcatcttgca 1179
>gb|BT003144.1| Arabidopsis thaliana At4g27070 mRNA, complete cds Length = 1428 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctc 470 |||||||||||||||||| || || ||||| ||||| || |||||||||||||| || || Sbjct: 1194 gaaactatgctcaggtccgactccagggtagtccaatccggcactgatggagtgtggttc 1135 Query: 471 aatcacttgtccatcagcatcctgca 496 ||| | ||| |||||| |||| |||| Sbjct: 1134 aatgatttggccatcatcatcttgca 1109
>gb|AY084334.1| Arabidopsis thaliana clone 104687 mRNA, complete sequence Length = 1677 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggctc 470 |||||||||||||||||| || || ||||| ||||| || |||||||||||||| || || Sbjct: 1243 gaaactatgctcaggtccgactccagggtagtccaatccggcactgatggagtgtggttc 1184 Query: 471 aatcacttgtccatcagcatcctgca 496 ||| | ||| |||||| |||| |||| Sbjct: 1183 aatgatttggccatcatcatcttgca 1158
>ref|NM_124862.3| Arabidopsis thaliana TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT) AT5G54810 (TSB1) mRNA, complete cds Length = 1657 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1228 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1169 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1168 tcaatgatttgtccatcatcatcttgca 1141
>gb|AY133620.1| Arabidopsis thaliana AT5g54810/MBG8_7 mRNA, complete cds Length = 1413 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1181 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1122 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1121 tcaatgatttgtccatcatcatcttgca 1094
>dbj|AK221396.1| Arabidopsis thaliana mRNA for tryptophan synthase beta chain 1 precursor, complete cds, clone: RAFL25-45-M24 Length = 581 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 234 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 175 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 174 tcaatgatttgtccatcatcatcttgca 147
>gb|AF367264.1|AF367264 Arabidopsis thaliana AT5g54810/MBG8_7 mRNA, complete cds Length = 1649 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1224 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1165 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1164 tcaatgatttgtccatcatcatcttgca 1137
>emb|BX831233.1|CNS0A1P3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1638 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1209 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1150 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1149 tcaatgatttgtccatcatcatcttgca 1122
>emb|BX829760.1|CNS0A1C2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1532 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1211 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1152 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1151 tcaatgatttgtccatcatcatcttgca 1124
>emb|BX829703.1|CNS0A1IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1584 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1210 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1151 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1150 tcaatgatttgtccatcatcatcttgca 1123
>emb|BX831477.1|CNS0A0OO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS95ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1544 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1171 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1112 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1111 tcaatgatttgtccatcatcatcttgca 1084
>emb|BX831093.1|CNS0A0PA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1093 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1034 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1033 tcaatgatttgtccatcatcatcttgca 1006
>gb|AY087382.1| Arabidopsis thaliana clone 34783 mRNA, complete sequence Length = 1555 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1230 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1171 Query: 469 tcaatcacttgtccatcagcatcctgca 496 ||||| | |||||||||| |||| |||| Sbjct: 1170 tcaatgatttgtccatcatcatcttgca 1143
>gb|AY761528.1| Sorghum bicolor clone 51836 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761527.1| Sorghum bicolor clone 50744 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761526.1| Sorghum bicolor clone 213900 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761525.1| Sorghum arundinaceum clone LWA88 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761524.1| Sorghum x drummondii clone LWA71 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761523.1| Sorghum arundinaceum clone LWA42 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761522.1| Sorghum arundinaceum clone LWA28 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761521.1| Sorghum arundinaceum clone LWA13b unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761520.1| Sorghum arundinaceum clone LWA13a unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761519.1| Sorghum arundinaceum clone LWA22 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761518.1| Sorghum bicolor clone 257595 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761517.1| Sorghum bicolor clone 221540 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761516.1| Sorghum bicolor clone 221655 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761515.1| Sorghum bicolor clone 221607 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761514.1| Sorghum bicolor clone 22913 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761513.1| Sorghum bicolor clone BTx623 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761512.1| Sorghum bicolor clone 287624 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761511.1| Sorghum bicolor clone 510906 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761510.1| Sorghum bicolor clone 267523 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761509.1| Sorghum bicolor clone 267525 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761508.1| Sorghum bicolor clone 510985 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761507.1| Sorghum bicolor clone 77034 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761506.1| Sorghum bicolor clone 83707 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761505.1| Sorghum bicolor clone 87088 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761504.1| Sorghum bicolor clone 55751 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761503.1| Sorghum bicolor clone 51365 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761502.1| Sorghum bicolor clone 51032 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761501.1| Sorghum bicolor clone 51397 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761500.1| Sorghum bicolor clone 50875 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761499.1| Sorghum bicolor clone RTx430 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AY761498.1| Sorghum bicolor clone 152702 unknown sequence Length = 744 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttccagccgagaggtgcgcttgaaagc 353 ||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 5 tgggaggtctccagggcagggatgatgccctccagacgagagacacgcttgaaagc 60
>gb|AE006013.1| Caulobacter crescentus CB15 section 339 of 359 of the complete genome Length = 13369 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttccagc 333 ||||||||||||| | ||||||||| |||||||||||||||||| Sbjct: 3547 gccagggcgtgggccggctccagggccgggatgatgccttccagc 3591
>gb|M19129.1|CCRTRPFBA C.crescentus trpFBA operon genes encoding tryptophan biosynthetic enzymes trpA, trpB and trpF, complete cds Length = 3562 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttccagc 333 ||||||||||||| | ||||||||| |||||||||||||||||| Sbjct: 2284 gccagggcgtgggccggctccagggccgggatgatgccttccagc 2240
>emb|X13299.1|PPTRPAB P. putida trpB and trpA genes for tryptophan synthase (EC 4.2.1.20) Length = 2270 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttccag 332 |||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 1219 gccagggcgtgggagctttccagggccgggatgatgccttccag 1176
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 383 catattcagcacgtccaatatccctcaagaaactatgctcaggtccaacacctgggtaat 442 ||||||||||||||||||| || | ||| |||||||||| || ||||| ||||| |||| Sbjct: 1495082 catattcagcacgtccaatttcttttaagtaactatgctccggcccaacccctggataat 1495141 Query: 443 c 443 | Sbjct: 1495142 c 1495142
>emb|BX834018.1|CNS0A0KQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1527 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatccaacccagcactgatggagtggggc 468 |||||||| ||||| ||||| || || ||||| ||||| || |||||||||||||| || Sbjct: 1173 aagaaactgtgctcgggtccgactccagggtagtccaatcctgcactgatggagtgtggt 1114 Query: 469 tcaat 473 ||||| Sbjct: 1113 tcaat 1109
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 448 ccagcactgatggagtggggctcaatcacttgtccatcagcatcctgcaatacataactc 507 ||||| || |||||||||| ||||| ||| || ||||| ||||||||||||| ||| ||| Sbjct: 2590473 ccagcgctaatggagtgggcctcaaccacctgaccatcggcatcctgcaatagatagctc 2590532 Query: 508 a 508 | Sbjct: 2590533 a 2590533
>gb|AF042320.1|AF042320 Camptotheca acuminata tryptophan synthase beta subunit mRNA, complete cds Length = 1706 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Minus Query: 384 atattcagcacgtccaatatccctcaagaaactatgctcaggtccaacacctgggtaatc 443 ||||||||||||||| ||||| ||| || || ||||| || ||||| || ||||| || Sbjct: 1239 atattcagcacgtcctatatctttcagaaagctgtgctctggcccaactccagggtagtc 1180 Query: 444 caacccagcactgatggagtggggctcaatcacttgtccatcagcatcctgcaatacata 503 || || ||||||||||| || |||||||| | ||| || ||| ||||||| |||| ||| Sbjct: 1179 caggcctgcactgatggaatgaggctcaattatttgcccgtcatcatcctgtaataaata 1120 Query: 504 actca 508 |||| Sbjct: 1119 gctca 1115 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 197 tggctgtgtggacatccttgtctcctcttccactgcagtt 236 ||||||| || || |||||||| ||||| ||||||||||| Sbjct: 1426 tggctgtatgaacgtccttgtcacctctgccactgcagtt 1387
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 417 atgctcaggtccaacacctgggtaatccaacccagc 452 ||||||||| || ||||| ||||||||||||||||| Sbjct: 876046 atgctcaggaccgacacccgggtaatccaacccagc 876011
>ref|XM_454431.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10637g predicted mRNA Length = 2130 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 tcaggtccaacacctgggtaatccaacccagc 452 ||||| |||||||||||||||||||| ||||| Sbjct: 1829 tcaggaccaacacctgggtaatccaaaccagc 1798
>gb|U53153.1| Caenorhabditis elegans cosmid T19A5, complete sequence Length = 30722 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 31 aagtttaacatacaacatattttt 54 |||||||||||||||||||||||| Sbjct: 8306 aagtttaacatacaacatattttt 8329
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 421 tcaggtccaacacctgggtaatccaacccagc 452 ||||| |||||||||||||||||||| ||||| Sbjct: 940071 tcaggaccaacacctgggtaatccaaaccagc 940040
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttccag 332 |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 39341 gccagggcgtgggagctttccagcgccgggatgatgccttccag 39384
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 409 aagaaactatgctcaggtccaacacctgggtaatc 443 ||||| ||||||||||| |||||||| |||||||| Sbjct: 573969 aagaagctatgctcaggaccaacaccagggtaatc 573935
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 415 ctatgctcaggtccaacacctgggtaatcca 445 ||||||||||| |||||||| |||||||||| Sbjct: 626304 ctatgctcagggccaacaccagggtaatcca 626274
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 281 ccaggtaagccagggcgtgggatgtctccagggcagggatgat 323 |||||||||| | ||| |||| |||||||||||||||||||| Sbjct: 2938676 ccaggtaagcaaaggcatgggccgtctccagggcagggatgat 2938634
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgca 496 |||| |||||||||||||| || ||||| | |||||||||| |||| |||| Sbjct: 24265 accctgcactgatggagtgtggttcaatgatttgtccatcatcatcttgca 24315
>gb|M23872.1|ATHTRPB A.thaliana tryptophan synthase beta subunit (trpB) gene, complete cds Length = 4225 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 446 acccagcactgatggagtggggctcaatcacttgtccatcagcatcctgca 496 |||| |||||||||||||| || ||||| | |||||||||| |||| |||| Sbjct: 2993 accctgcactgatggagtgtggttcaatgatttgtccatcatcatcttgca 2943
>gb|M58444.1|ACCTRPFB A.calcoaceticus trpFB operon Length = 2217 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 415 ctatgctcaggtccaacacctgggtaatcca 445 ||||||||||| |||||||| |||||||||| Sbjct: 1875 ctatgctcagggccaacaccagggtaatcca 1845
>gb|AC130666.9| Mus musculus chromosome 5, clone RP24-79O7, complete sequence Length = 172995 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 atacaacatatttttattacat 61 |||||||||||||||||||||| Sbjct: 88223 atacaacatatttttattacat 88202
>gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, complete sequence Length = 177251 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 atccaatgcctcctggtctgtcacac 379 ||||||||||||||||||| |||||| Sbjct: 86112 atccaatgcctcctggtctttcacac 86137
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 44.1 bits (22), Expect = 0.44 Identities = 55/66 (83%) Strand = Plus / Plus Query: 268 gggcagagcttctccaggtaagccagggcgtgggatgtctccagggcagggatgatgcct 327 |||||||||| |||||| | || | |||||||| ||||||||||| || |||||||| Sbjct: 86374 gggcagagctgctccagccaggcgaaggcgtgggcagtctccagggcgggaatgatgccc 86433 Query: 328 tccagc 333 |||||| Sbjct: 86434 tccagc 86439
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 tccagggcagggatgatgccttccag 332 |||||||| ||||||||||||||||| Sbjct: 38461 tccagggccgggatgatgccttccag 38486
>dbj|AB178644.1| Polygonum tinctorium mRNA for tryptophan synthase beta subunit, complete cds Length = 1696 Score = 44.1 bits (22), Expect = 0.44 Identities = 64/78 (82%) Strand = Plus / Minus Query: 252 accatccggcagtgttgggcagagcttctccaggtaagccagggcgtgggatgtctccag 311 |||||||| || ||||| ||||||||||||| || |||| ||||| |||||||||| Sbjct: 1369 accatccgcgagggttggacagagcttctccaaataggccaatgcgtgagatgtctccaa 1310 Query: 312 ggcagggatgatgccttc 329 ||||| || |||||||| Sbjct: 1309 agcaggaattatgccttc 1292
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgcc 326 ||||| |||||||| | ||||||||||| ||||||||| Sbjct: 3058724 gccagagcgtgggaggactccagggcagcgatgatgcc 3058687
>gb|AF047024.1|AF047024 Chlamydomonas reinhardtii tryptophan synthase beta (MAA7) mRNA, partial cds Length = 1835 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Minus Query: 274 agcttctccaggtaagccagggcgtgggatgtctccagggcagggatgatgccttcca 331 |||||||||||||| || | ||||||| |||||||| || ||||| |||||||||| Sbjct: 1239 agcttctccaggtaggcgatggcgtggctggtctccagcgcggggataatgccttcca 1182
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttc 329 ||||| ||||||| || |||||| ||||| ||||||||||| Sbjct: 69298 gccagtgcgtgggctgactccagcgcaggtatgatgccttc 69258
>ref|XM_637643.1| Dictyostelium discoideum hypothetical protein (DDB0169120), partial mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tatttttattacatataaatt 68 ||||||||||||||||||||| Sbjct: 663 tatttttattacatataaatt 643
>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence Length = 250053 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 atatttttattacatataaat 67 ||||||||||||||||||||| Sbjct: 80372 atatttttattacatataaat 80352
>gb|AY246079.1| Escherichia coli strain DAEC192 tryptophan synthase subunit B (trpB) gene, partial cds Length = 1114 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttc 329 |||||||||||||| | |||||| || |||||||| ||||| Sbjct: 1043 gccagggcgtgggaggactccagcgccgggatgatcccttc 1003
>gb|AY246059.1| Escherichia coli strain DAEC19 tryptophan synthase subunit B (trpB) gene, partial cds Length = 1138 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttc 329 |||||||||||||| | |||||| || |||||||| ||||| Sbjct: 1043 gccagggcgtgggaggactccagcgccgggatgatcccttc 1003
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 307 tccagggcagggatgatgccttccagccg 335 ||||| || |||||||||||||||||||| Sbjct: 67038 tccagcgccgggatgatgccttccagccg 67066
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tatttttattacatataaatt 68 ||||||||||||||||||||| Sbjct: 145652 tatttttattacatataaatt 145672
>gb|AY132993.1| Escherichia coli strain ECOR47 tryptophan synthase subunit B (trpB) gene, partial cds Length = 1138 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttc 329 |||||||||||||| | |||||| || |||||||| ||||| Sbjct: 1043 gccagggcgtgggaggactccagcgccgggatgatcccttc 1003
>emb|BX321874.2| Human DNA sequence from clone RP11-496M10 on chromosome X, complete sequence Length = 52877 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ctttatttataccaagtttaa 38 ||||||||||||||||||||| Sbjct: 46033 ctttatttataccaagtttaa 46013
>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel gene, complete sequence Length = 197322 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 taacatacaacatatttttattacatata 64 ||||||||||||||||||| ||| ||||| Sbjct: 36659 taacatacaacatatttttcttatatata 36631
>emb|AL590644.14| Human DNA sequence from clone RP11-380J14 on chromosome 1 Contains a novel gene (FLJ45933), the PADI1 gene for type I peptidyl arginine deiminase, the PADI3 gene for type III peptidyl arginine deiminase, the 5' end of the PADI4 gene for type IV peptidyl arginine deiminase, complete sequence Length = 164862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ttcagaaccaccctcacacca 255 ||||||||||||||||||||| Sbjct: 120454 ttcagaaccaccctcacacca 120434
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 307 tccagggcagggatgatgccttccagccg 335 ||||||||||| ||||| ||||||||||| Sbjct: 3114455 tccagggcaggaatgattccttccagccg 3114427
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes) Length = 355060 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ttcagaaccaccctcacacca 255 ||||||||||||||||||||| Sbjct: 221992 ttcagaaccaccctcacacca 221972
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ttacatataaattcaaaaaac 76 ||||||||||||||||||||| Sbjct: 3977458 ttacatataaattcaaaaaac 3977438
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 307 tccagggcagggatgatgccttccagccg 335 ||||||||||| ||||| ||||||||||| Sbjct: 3051625 tccagggcaggaatgattccttccagccg 3051597
>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acatacaacatatttttatta 58 ||||||||||||||||||||| Sbjct: 188522 acatacaacatatttttatta 188542
>emb|BX072569.6| Zebrafish DNA sequence from clone CH211-184B9 in linkage group 22, complete sequence Length = 144729 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 tatttttattacatataaatt 68 ||||||||||||||||||||| Sbjct: 56092 tatttttattacatataaatt 56072
>gb|M15826.1|PSETRPAB P.aeruginosa trpA and trpB genes, encoding tryptophan synthase alpha- and beta-chains, complete cds Length = 2853 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttc 329 |||||||||||||| | ||||| || |||||||||||||| Sbjct: 1119 gccagggcgtgggagctttccagcgccgggatgatgccttc 1079
>dbj|AP001065.1| Homo sapiens genomic DNA, chromosome 21, clone:KB68A7, MX1-D21S171 region, complete sequence Length = 115798 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acatacaacatatttttatta 58 ||||||||||||||||||||| Sbjct: 78626 acatacaacatatttttatta 78646
>gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, complete sequence Length = 180431 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ttcaaaaaaccaaactaaat 86 |||||||||||||||||||| Sbjct: 13301 ttcaaaaaaccaaactaaat 13282
>gb|AC147027.4| Pan troglodytes BAC clone RP43-92F2 from 7, complete sequence Length = 162023 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gtggacatccttgtctcctc 223 |||||||||||||||||||| Sbjct: 90597 gtggacatccttgtctcctc 90578
>gb|AF275271.2| Schizosaccharomyces octosporus mitochondrion, complete genome Length = 44227 Score = 40.1 bits (20), Expect = 6.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 47 atatttttattacatataaattcaaaaa 74 |||||||||||||||| ||||||||||| Sbjct: 28551 atatttttattacata-aaattcaaaaa 28577
>gb|AC161021.4| Pan troglodytes BAC clone CH251-2N24 from chromosome 7, complete sequence Length = 187139 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gtggacatccttgtctcctc 223 |||||||||||||||||||| Sbjct: 132503 gtggacatccttgtctcctc 132484
>gb|AC165344.3| Mus musculus BAC clone RP23-390P7 from chromosome 16, complete sequence Length = 193532 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttattacatataaattcaa 71 |||||||||||||||||||| Sbjct: 111932 tttattacatataaattcaa 111951
>gb|AC167141.2| Mus musculus BAC clone RP23-313L4 from chromosome 16, complete sequence Length = 192972 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caaaaaaccaaactaaatta 88 |||||||||||||||||||| Sbjct: 43130 caaaaaaccaaactaaatta 43149
>gb|AC138093.7| Mus musculus chromosome 16, clone RP24-559J21, complete sequence Length = 123569 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tttattacatataaattcaa 71 |||||||||||||||||||| Sbjct: 82062 tttattacatataaattcaa 82043
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence Length = 252718 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 caaaaaaccaaactaaatta 88 |||||||||||||||||||| Sbjct: 9647 caaaaaaccaaactaaatta 9628
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 92415 gctgtgttgacatccttgtctcct 92392
>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence Length = 153106 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 tcacactatcatattcagca 393 |||||||||||||||||||| Sbjct: 83233 tcacactatcatattcagca 83252
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence Length = 124254 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 ttgtccatcagcatcctgca 496 |||||||||||||||||||| Sbjct: 22516 ttgtccatcagcatcctgca 22535
>gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, complete sequence Length = 185729 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 caaaaaaccaaactaaatta 88 |||||||||||||||||||| Sbjct: 77510 caaaaaaccaaactaaatta 77529
>ref|XM_949018.1| Theileria annulata strain Ankara hypothetical protein (TA02845) partial mRNA Length = 8538 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttattacatataaattcaa 71 |||||||||||||||||||| Sbjct: 5884 tttattacatataaattcaa 5903
>gb|AC002564.1| Homo sapiens BAC clone CTB-164L14 from 7, complete sequence Length = 94320 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gtggacatccttgtctcctc 223 |||||||||||||||||||| Sbjct: 46641 gtggacatccttgtctcctc 46622
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tatttttattacatataaat 67 |||||||||||||||||||| Sbjct: 158459 tatttttattacatataaat 158478
>emb|AL109657.8|HSDJ842G6 Human DNA sequence from clone RP5-842G6 on chromosome 20 Contains the 3' end of the C20orf7 gene for chromosome 20 open reading frame 7 (FLJ22324) and the 3' end of the C20orf50 gene for chromosome 20 open reading frame 50 (dJ631M13.1, similar to SEL1L (DKFZp434C1826)), complete sequence Length = 100272 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aacatacaacatatttttat 56 |||||||||||||||||||| Sbjct: 9892 aacatacaacatatttttat 9911
>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete sequence Length = 223037 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 atacaacatatttttattacatataaat 67 ||||||||||||||| ||||||||||| Sbjct: 18306 atacaacatatttttggtacatataaat 18333
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaa 446 |||||||||||||||||| || || ||||| ||||| Sbjct: 92149 gaaactatgctcaggtccgactccagggtagtccaa 92114
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaa 446 |||||||||||||||||| || || ||||| ||||| Sbjct: 8638 gaaactatgctcaggtccgactccagggtagtccaa 8603
>emb|CR382384.18| Zebrafish DNA sequence from clone CH211-15B7 in linkage group 8, complete sequence Length = 124327 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 acatatttttattacatata 64 |||||||||||||||||||| Sbjct: 90655 acatatttttattacatata 90674
>emb|BX950179.6| Zebrafish DNA sequence from clone DKEY-27P23 in linkage group 5, complete sequence Length = 235445 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tataaattcaaaaaaccaaa 80 |||||||||||||||||||| Sbjct: 56726 tataaattcaaaaaaccaaa 56745
>gb|AC183768.2| Pan troglodytes BAC clone CH251-337F15 from chromosome 14, complete sequence Length = 148598 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 atatttttattacatataaattca 70 |||||||||||||||||| ||||| Sbjct: 49177 atatttttattacatatatattca 49154
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 catccttgtctcctcttcca 228 |||||||||||||||||||| Sbjct: 60777 catccttgtctcctcttcca 60758
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 439 taatccaacccagcactgatggagtggg 466 |||||||| ||||| ||||||||||||| Sbjct: 1581572 taatccaagccagcgctgatggagtggg 1581545
>gb|AC109482.3| Homo sapiens chromosome 5 clone RP11-492A10, complete sequence Length = 101941 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ataaattcaaaaaaccaaac 81 |||||||||||||||||||| Sbjct: 12932 ataaattcaaaaaaccaaac 12951
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 265 gttgggcagagcttctccaggtaagccagggcgtgggatgtctccagggcagggatgatg 324 ||||| ||||||||||| |||| ||| | ||||||| ||| ||||| || || |||||| Sbjct: 2088948 gttggacagagcttctcaaggtgagcaaaagcgtgggctgtttccagcgccggaatgatg 2089007 Query: 325 ccttccag 332 || ||||| Sbjct: 2089008 ccctccag 2089015
>gb|BC056428.1| Mus musculus vezatin, adherens junctions transmembrane protein, mRNA (cDNA clone MGC:66585 IMAGE:5716245), complete cds Length = 2900 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 1862 gctgtgttgacatccttgtctcct 1885
>ref|NM_172538.2| Mus musculus vezatin, adherens junctions transmembrane protein (Vezt), mRNA Length = 4480 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 1875 gctgtgttgacatccttgtctcct 1898
>emb|BX530089.9| Zebrafish DNA sequence from clone CH211-129M12 in linkage group 3, complete sequence Length = 176077 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atatttttattacatataaa 66 |||||||||||||||||||| Sbjct: 147486 atatttttattacatataaa 147505
>gb|AY562383.1| Leptorhynchoides thecatus mitochondrion, complete genome Length = 13888 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tatttttattacatataaat 67 |||||||||||||||||||| Sbjct: 11114 tatttttattacatataaat 11095
>dbj|AK036017.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630027H07 product:TRANSMEMBRANE PROTEIN VEZATIN homolog [Homo sapiens], full insert sequence Length = 4480 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 1875 gctgtgttgacatccttgtctcct 1898
>dbj|AK031848.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330418D12 product:TRANSMEMBRANE PROTEIN VEZATIN homolog [Homo sapiens], full insert sequence Length = 2956 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 1938 gctgtgttgacatccttgtctcct 1961
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8, complete sequence Length = 168607 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 atatttttattacatataaa 66 |||||||||||||||||||| Sbjct: 155655 atatttttattacatataaa 155636
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atttttattacatataaatt 68 |||||||||||||||||||| Sbjct: 23582165 atttttattacatataaatt 23582184
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tgtgtggacatccttgtctcctct 224 ||||||||||||||| |||||||| Sbjct: 3700714 tgtgtggacatccttctctcctct 3700737
>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete sequence Length = 193804 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acatataaattcaaaaaacc 77 |||||||||||||||||||| Sbjct: 46144 acatataaattcaaaaaacc 46163
>gb|AC078846.2|AC078846 Homo sapiens chromosome 7 clone RP11-448A19, complete sequence Length = 219428 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggcagtgttgggcagagctt 278 |||||||||||||||||||| Sbjct: 65412 ggcagtgttgggcagagctt 65431
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ataaattcaaaaaaccaaac 81 |||||||||||||||||||| Sbjct: 110820 ataaattcaaaaaaccaaac 110839
>gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complete sequence Length = 134911 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tatttttattacatataaat 67 |||||||||||||||||||| Sbjct: 81113 tatttttattacatataaat 81094
>dbj|AP006435.1| Sus scrofa CC chemokine receptor genes (CCR3, CCR2, CCR5, CCRL2, LTF), complete and partial cds, clone: 0479G08 Length = 144233 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 atcacttgtccatcagcatc 491 |||||||||||||||||||| Sbjct: 95628 atcacttgtccatcagcatc 95647
>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7, LRRC2), complete cds, clone: 0475A03 Length = 165558 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 atcacttgtccatcagcatc 491 |||||||||||||||||||| Sbjct: 27023 atcacttgtccatcagcatc 27042
>gb|AC066615.7|AC066615 Homo sapiens chromosome 15 clone RP11-90J19 map 15q21.1, complete sequence Length = 175001 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acatataaattcaaaaaacc 77 |||||||||||||||||||| Sbjct: 141624 acatataaattcaaaaaacc 141643
>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete sequence Length = 176639 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tcacactatcatattcagca 393 |||||||||||||||||||| Sbjct: 120979 tcacactatcatattcagca 120960
>gb|BC020913.1| Homo sapiens, clone IMAGE:4733200, mRNA Length = 857 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggcagtgttgggcagagctt 278 |||||||||||||||||||| Sbjct: 380 ggcagtgttgggcagagctt 399
>gb|AC009477.4| Homo sapiens BAC clone RP11-209H16 from 2, complete sequence Length = 173071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 atgtctccagggcagggatg 321 |||||||||||||||||||| Sbjct: 90527 atgtctccagggcagggatg 90508
>gb|AF435978.1| Clostridium cellulovorans hypothetical protein gene, complete cds; dxylA pseudogene, complete sequence; and xylanase (xynA) gene, complete cds Length = 8737 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 atttttattacatataaatt 68 |||||||||||||||||||| Sbjct: 1268 atttttattacatataaatt 1249
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atttttattacatataaatt 68 |||||||||||||||||||| Sbjct: 63129 atttttattacatataaatt 63148
>emb|BX510933.4| Zebrafish DNA sequence from clone CH211-271G16 in linkage group 4, complete sequence Length = 151440 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tataaattcaaaaaaccaaa 80 |||||||||||||||||||| Sbjct: 46411 tataaattcaaaaaaccaaa 46430
>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G09 Length = 140067 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tgtgtggacatccttgtctcctct 224 ||||||||||||||| |||||||| Sbjct: 41031 tgtgtggacatccttctctcctct 41054
>dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, map 22, complete sequences Length = 193756 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cttgtctcctcttccactgc 232 |||||||||||||||||||| Sbjct: 54551 cttgtctcctcttccactgc 54532
>emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in linkage group 4, complete sequence Length = 186500 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atatttttattacatataaa 66 |||||||||||||||||||| Sbjct: 175858 atatttttattacatataaa 175877
>dbj|AB102786.1| Cycloclasticus sp. A5 orf1, phnA1b, phnA1, phnA2, phnC, trpB, orf7, phnA4, phnA3 and phnD genes for hypothetical protein, aromatic dioxygenase large subunit, PAH dioxygenase iron sulfer protein large subunit, PAH dioxygenase iron sulfer protein small subunit, extradiol dioxygenase, tryptophan synthase b subunit, hypothetical protein, ferredoxin reductase, ferredoxin and isomerase, complete and partial cds Length = 10580 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 418 tgctcaggtccaacacctgggtaatccaaccc 449 |||| ||||||||| ||||| ||||||||||| Sbjct: 7613 tgctgaggtccaacccctggataatccaaccc 7582
>emb|AJ328899.1|HSA328899 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PJ9R Length = 851 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 catcagcatcctgcaataca 501 |||||||||||||||||||| Sbjct: 342 catcagcatcctgcaataca 323
>gb|AC156636.2| Mus musculus BAC clone RP24-401F19 from chromosome 12, complete sequence Length = 170370 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 atatttttattacatataaattcaaaaa 74 |||| |||||||||||||||||| |||| Sbjct: 106213 atatatttattacatataaattctaaaa 106186
>dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, section 49/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cttgtctcctcttccactgc 232 |||||||||||||||||||| Sbjct: 261965 cttgtctcctcttccactgc 261946
>gb|U77666.1|BRU77666 Brassica rapa pollen coat protein homolog (BAN103) gene, complete cds Length = 2539 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acatatttttattacatata 64 |||||||||||||||||||| Sbjct: 2447 acatatttttattacatata 2428
>emb|CT030234.9| M.truncatula DNA sequence from clone MTH2-22I15 on chromosome 3, complete sequence Length = 112511 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 ctatgctcaggtccaacacctgggtaatccaa 446 ||||| |||||||||||||| ||||| ||||| Sbjct: 22660 ctatgttcaggtccaacaccagggtagtccaa 22691 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 298 tgggatgtctccagggcagggatgatgccttc 329 |||||||||||||| || || ||||||||||| Sbjct: 21582 tgggatgtctccagagctggaatgatgccttc 21613
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 289 gccagggcgtgggatgtctccagggcagggatgatgccttccag 332 |||| ||||||||| | |||||||| || |||||||||||||| Sbjct: 92502 gccaaggcgtgggagctttccagggctggaatgatgccttccag 92545
>dbj|AP000239.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-32A2, complete sequence Length = 119326 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cttgtctcctcttccactgc 232 |||||||||||||||||||| Sbjct: 77045 cttgtctcctcttccactgc 77026
>gb|AF042321.1|AF042321 Camptotheca acuminata tryptophan synthase beta (TSB) gene, complete cds Length = 9645 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 197 tggctgtgtggacatccttgtctcctcttccactgcagtt 236 ||||||| || || |||||||| ||||| ||||||||||| Sbjct: 8584 tggctgtatgaacgtccttgtcacctctgccactgcagtt 8545
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 atacaacatatttttattacatataaat 67 ||||||||||||||| ||||||||||| Sbjct: 156370 atacaacatatttttggtacatataaat 156397
>emb|AL928821.6| Zebrafish DNA sequence from clone CH211-127N10, complete sequence Length = 153232 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 atatttttattacatataaa 66 |||||||||||||||||||| Sbjct: 939 atatttttattacatataaa 920
>emb|X96607.1|MMIGHALP M.musculus IgH 3' alpha enhancer DNA Length = 17956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 ttgtccatcagcatcctgca 496 |||||||||||||||||||| Sbjct: 15812 ttgtccatcagcatcctgca 15831
>gb|AY753561.1| Mus musculus vezatin isoform 2.4 mRNA, complete cds, alternatively spliced Length = 2343 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gctgtgtggacatccttgtctcct 222 ||||||| |||||||||||||||| Sbjct: 1831 gctgtgttgacatccttgtctcct 1854
>gb|M81620.1|ATHTRPSB A.thaliana tryptophan synthase beta-subunit (TSB2) gene, complete cds Length = 3007 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 411 gaaactatgctcaggtccaacacctgggtaatccaa 446 |||||||||||||||||| || || ||||| ||||| Sbjct: 2172 gaaactatgctcaggtccgactccagggtagtccaa 2137
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 265 gttgggcagagcttctccaggtaagccagggcgtgggatgtctccagggcagggatgatg 324 ||||| ||||||||||| |||| ||| | ||||||| ||| ||||| || || |||||| Sbjct: 2228082 gttggacagagcttctcaaggtgagcaaaagcgtgggctgtttccagcgccggaatgatg 2228023 Query: 325 ccttccag 332 || ||||| Sbjct: 2228022 ccctccag 2228015
>dbj|AP000199.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 5/8, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cttgtctcctcttccactgc 232 |||||||||||||||||||| Sbjct: 16026 cttgtctcctcttccactgc 16045
>dbj|AP000095.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 5/7 Length = 100000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cttgtctcctcttccactgc 232 |||||||||||||||||||| Sbjct: 16026 cttgtctcctcttccactgc 16045 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,220,790 Number of Sequences: 3902068 Number of extensions: 5220790 Number of successful extensions: 136615 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 135921 Number of HSP's gapped (non-prelim): 692 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
