>YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sulfhydrylase|
           3'region
          Length = 137

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIK 356
           +VMG R  G V  +FLGS S   +    CPV++++
Sbjct: 103 IVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137

>Y1388_SYNY3 (P74148) Hypothetical protein sll1388|
          Length = 154

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIK 356
           +V+G R    +  +FLGSVS+Y I+ V C V++++
Sbjct: 119 VVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIK 356
           +VMG R    +K + LGS SNY +N    PV+V +
Sbjct: 535 VVMGSRGRSHLKGVLLGSFSNYLVNKSSVPVMVAR 569

>Y2028_MYCBO (P64922) Hypothetical protein Mb2028c|
          Length = 295

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVI 359
           +V+G    G + R  LGSVS+  +   GCPV VI
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147

>Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061|
          Length = 295

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVI 359
           +V+G    G + R  LGSVS+  +   GCPV VI
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147

>Y531_METJA (Q57951) Hypothetical protein MJ0531|
          Length = 170

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIK 356
           +VMG      ++R+ LGSV+   I +  CPV+V+K
Sbjct: 131 IVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVK 165

>YXIE_BACSU (P42297) Hypothetical protein yxiE precursor|
          Length = 148

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIK 356
           +V+G R    +K M LGSVS+       CPV++++
Sbjct: 114 IVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148

>Y2346_MYCBO (P64996) Hypothetical protein Mb2346c|
          Length = 292

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIKG 353
           L +G   FG V R+FLGS S   I     PV+V+ G
Sbjct: 257 LALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG 292

>Y2319_MYCTU (P64995) Hypothetical protein Rv2319c/MT2382|
          Length = 292

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVIKG 353
           L +G   FG V R+FLGS S   I     PV+V+ G
Sbjct: 257 LALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG 292

>CNG_DROME (Q24278) Cyclic nucleotide-gated cation channel (CNG channel)|
          Length = 665

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 179 WMRPKNCSGLYIPCVEIAKL 120
           W  P+ CS LY+PC  I +L
Sbjct: 204 WWPPETCSSLYLPCPVIVRL 223

>COBS_RALSO (Q8XWS4) Cobalamin synthase (EC 2.-.-.-)|
          Length = 258

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 91  GLFPRIPQPTNLAISTHGMYRPEQFFGLI 177
           G F RIP P ++  S  G+ R  +FF L+
Sbjct: 17  GYFTRIPVPASVGFSQDGLNRAARFFPLV 45

>Y1654_SYNY3 (P72817) Hypothetical protein sll1654|
          Length = 157

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 460 LVMGCRAFGPVKRMFLGSVSNYCINSVGCPVVVI 359
           +VMGCR  G        SV+   IN   CPV+V+
Sbjct: 123 IVMGCRGLGLTTEGVAESVTARVINLSPCPVLVV 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,799,008
Number of Sequences: 219361
Number of extensions: 1290066
Number of successful extensions: 3169
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)