>SSPB_SHIFL (Q83Q08) Stringent starvation protein B|
          Length = 165

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 354 DEPTGVGNESPMLIAAGGKLC**PGADPGRPQHESHAHPEDEPTAP 491
           DE     NE+ M +  G K           P H+   HP+DEP  P
Sbjct: 119 DEEASADNETVMSVIDGDK-----------PDHDDDTHPDDEPPQP 153

>SSPB_ECOLI (P0AFZ3) Stringent starvation protein B|
          Length = 165

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 354 DEPTGVGNESPMLIAAGGKLC**PGADPGRPQHESHAHPEDEPTAP 491
           DE     NE+ M +  G K           P H+   HP+DEP  P
Sbjct: 119 DEEASADNETVMSVIDGDK-----------PDHDDDTHPDDEPPQP 153

>SSPB_ECO57 (P0AFZ4) Stringent starvation protein B|
          Length = 165

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 354 DEPTGVGNESPMLIAAGGKLC**PGADPGRPQHESHAHPEDEPTAP 491
           DE     NE+ M +  G K           P H+   HP+DEP  P
Sbjct: 119 DEEASADNETVMSVIDGDK-----------PDHDDDTHPDDEPPQP 153

>FOXC2_MOUSE (Q61850) Forkhead box protein C2 (Forkhead-related protein FKHL14)|
           (Mesenchyme fork head protein 1) (MFH-1 protein)
           (Transcription factor FKH-14)
          Length = 494

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 354 DEPTGVGNESPML-IAAG--GKLC**PGADPGRPQHESHAHPEDEPTAP 491
           D P+G G+    L +AAG  G L    GA     QH  H HP+  P AP
Sbjct: 359 DHPSGPGSPLGALNLAAGQEGAL----GASGHHHQHHGHLHPQAPPPAP 403


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,596,635
Number of Sequences: 219361
Number of extensions: 1169348
Number of successful extensions: 2283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)