>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
 Frame = +2

Query: 248  PAGCSRRIQGCPAMIRLQLQVFPVTELD-----------LSVMVASPGLPREQPSEASVR 394
            PAG   R  GCPAM  L  Q+F +T +D            S++V  PG  R   S    +
Sbjct: 1916 PAGLGGR-SGCPAMSPLSPQIFQLTCMDPADDDGQFQEQRSLVVTDPGSMRRSFSTIRDK 1974

Query: 395  RTAVSWKEGTSGSASARRTVAS 460
            R++ SW E  S   S+  T  S
Sbjct: 1975 RSSSSWLEEFSMERSSDNTYKS 1996

>ETOL2_ARATH (Q9LV01) ETO1-like protein 2 (Ethylene overproducer 1-like protein|
           2)
          Length = 925

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
 Frame = +2

Query: 53  LRTKVKSSAE------YQRHHAIFHTIQKNRALR*LAWRSRCLLQACRSALPSPERPRFP 214
           L  +++SS+E      Y   +A+  ++   + LR      RCLL A R A+  P +  F 
Sbjct: 79  LYRRIESSSESEASMLYLEQYAVLRSLGDAKLLR------RCLLNARRHAIDVPCKVVFS 132

Query: 215 AWSRSPRRHPAPAG-----CSRRIQGCP 283
           AW R  RR     G     C+     CP
Sbjct: 133 AWLRFFRREHELVGVESMDCNGLASECP 160

>SRP1_SCHPO (Q10193) Pre-mRNA-splicing factor srp1|
          Length = 275

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 273 WIRREQPAGAGCRRGERDHAGKRGRSGDGRADRHACSRHRLRHAS 139
           W ++  P+G G +RG R   G R     GR    + S H  R  S
Sbjct: 83  WAKQPPPSGPGSKRGGRRERGGRVHGDSGRLRSRSPSPHEARSRS 127

>XRCC1_RAT (Q9ESZ0) DNA-repair protein XRCC1 (X-ray repair cross-complementing|
           protein 1)
          Length = 631

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 188 PSPERPRFPAWSRSPRRHPAPAGCSRRIQGCP 283
           P+P+RP+ P  SR+P   PA     + + G P
Sbjct: 268 PAPKRPKLPVPSRTPAATPASTPAQKAVPGKP 299

>MOT6_HUMAN (O15375) Monocarboxylate transporter 6 (MCT 6) (MCT 5)|
          Length = 505

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 182 ALPSPERPRFPAWSRSPRRHPAPAGCSRRIQGCPAMIR 295
           A   P + R P       R P PAG ++ + GCPA  R
Sbjct: 442 AKDGPGKQRSPEIMCQSSRQPRPAGVNKHLWGCPASSR 479

>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Brain cyclic nucleotide
           gated channel 3) (BCNG-3)
          Length = 1186

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = -2

Query: 411 HDTAVRRT------DASDGCSRGNPGLATITDRSSSVTGNTWSWRRIIAGHPWIRREQPA 250
           HD+A  R       DAS G  R  PGLAT  +R ++         +  A  P  +  QPA
Sbjct: 123 HDSAEERRLIAAEGDASPGEDRTPPGLATEPERPATAA-------QPAASPPPQQPPQPA 175

Query: 249 GAGCRRGERDHAGK 208
            A C +   D A K
Sbjct: 176 SASCEQPSADTAIK 189

>XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cross-complementing|
           protein 1)
          Length = 633

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 194 PERPRFPAWSRSPRRHPAPAGCSRRIQGCP 283
           P+RP+ PA +R+P   P PA     + G P
Sbjct: 270 PKRPKLPAPTRTPATAPVPARAQGAVTGKP 299

>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -2

Query: 261 EQPAGAGCRRGERDHAGK-----RGRS-GDGRADRHACSRHRLRHAS 139
           EQ       R E+D   +     RGR+ GDG ADRH   R R R AS
Sbjct: 564 EQNVSRKDTRSEQDKCNREPSKGRGRATGDGLADRHKRERSRARRAS 610

>GP150_HUMAN (Q8NGU9) Probable G-protein coupled receptor 150|
          Length = 434

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +2

Query: 200 RPRFPA----WSRSPRRHPAPAGCSRRIQGCPAMIRLQLQVFPVTELDLSVMVASPGLPR 367
           RP+ PA    WS SP R PAP+   R                 V  L +S+++A   +  
Sbjct: 263 RPQAPAAAAPWSASPGRAPAPSALPRA---------------KVQSLKMSLLLALLFVGC 307

Query: 368 EQPSEASVRRTAVSWKEGTSG 430
           E P  A+  R A +W  G +G
Sbjct: 308 ELPYFAA--RLAAAWSSGPAG 326

>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4
          Length = 1198

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = -2

Query: 411 HDTAVRRT------DASDGCSRGNPGLATITDRSSSVTGNTWSWRRIIAGHPWIRREQPA 250
           HD+A  R       DAS G  R  PGLAT  +R  +         +  A  P  +  QPA
Sbjct: 123 HDSAEERRLIAAEGDASPGEDRTPPGLATEPERPGAAA-------QPAASPPPQQPPQPA 175

Query: 249 GAGCRRGERDHAGK 208
            A C +   D A K
Sbjct: 176 SASCEQPSADTAIK 189

>SUV3_DROME (P20193) Protein suppressor of variegation 3-7|
          Length = 1250

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 312 NTWSWRRIIAGHPWIRREQPAG 247
           N ++W R +  HPW+ R  P G
Sbjct: 293 NNFNWLRWLRWHPWLERSMPTG 314

>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1|
           zinc finger protein) (Scratch 1) (SCRT) (hScrt)
          Length = 348

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 16/63 (25%)
 Frame = -2

Query: 264 REQPAGAGCRRGERDHAGKRGRSGDGRA---DRHAC-------------SRHRLRHASYL 133
           R   +G G R G R  AG   R+G G A    RHAC             SRH+  H S  
Sbjct: 158 RSLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHACGECGKTYATSSNLSRHKQTHRSLD 217

Query: 132 SAL 124
           S L
Sbjct: 218 SQL 220

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +2

Query: 215  AWSRSPRRHPAPAGCSRRIQGCPAMIRLQLQVFPVTELDLSVMVASPGLPREQPSEASVR 394
            +++  PR  P P  C +  +G P  + L+ QV P  +  L     +PG P+  P  A+ +
Sbjct: 1237 SFTTQPRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPG-PQGPPGSATAK 1295

>MUC4_HUMAN (Q99102) Mucin-4 (Tracheobronchial mucin) (Fragment)|
          Length = 610

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -2

Query: 411 HDTAVRRTDASDGCSRGNPGLATITDRSSSVTGNTWS 301
           H T++  TDAS   S G+  L  +TD SS+ TG+T S
Sbjct: 136 HATSLHVTDASS-VSTGHATLLHVTDASSASTGHTTS 171

>S22A4_HUMAN (Q9H015) Organic cation/carnitine transporter 1 (Solute carrier|
           family 22 member 4) (Ergothioneine transporter) (ET
           transporter)
          Length = 551

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -2

Query: 330 SSSVTGNTWSWRRII--AGHPWIRREQPAGAGCRRGERDHAGKRGRSGDGRADRHACSRH 157
           S+S+  N ++   ++  AG P  R   P  A      R+++    R  DGR   H+CSR+
Sbjct: 26  SASIIPNGFNGMSVVFLAGTPEHRCRVPDAANLSSAWRNNSVPL-RLRDGREVPHSCSRY 84

Query: 156 RLRHASYLSAL 124
           RL   +  SAL
Sbjct: 85  RLATIANFSAL 95

>EGG3_SCHMA (P13396) Eggshell protein precursor (Chorion protein)|
          Length = 177

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 400 GGVMEGGDIGLGIGAPDGGVMEGGDIG 480
           GG   GGD G G G   GG   GGD G
Sbjct: 48  GGGCTGGDCGGGYGGGYGGGCSGGDCG 74

>EGG2_SCHMA (P12796) Eggshell protein precursor (Chorion protein)|
          Length = 177

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +1

Query: 400 GGVMEGGDIGLGIGAPDGGVMEGGDIG 480
           GG   GGD G G G   GG   GGD G
Sbjct: 48  GGGCTGGDCGGGYGGGYGGGCSGGDCG 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,447,655
Number of Sequences: 219361
Number of extensions: 978046
Number of successful extensions: 4369
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4356
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)