ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY666013.1| Triticum aestivum cold acclimation induced protei... 387 e-104
2gb|AY666014.1| Thinopyrum elongatum early salt stress and cold a... 343 3e-91
3gb|AY666012.1| Thinopyrum elongatum early salt stress and cold a... 236 6e-59
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
6dbj|AK107980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
7gb|U51997.1| Caenorhabditis elegans cosmid F19G12, complete sequ... 42 1.7
8emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, c... 42 1.7
9emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.7
10gb|AF039080.1|AF039080 Sphaeropsis sapinea RNA virus 2, complete... 42 1.7
11gb|U56963.1| Caenorhabditis elegans cosmid T13A10, complete sequ... 42 1.7
12gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, com... 40 6.6
13gb|AC119870.17| Mus musculus chromosome 3, clone RP24-261K17, co... 40 6.6
14gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.6
15gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete... 40 6.6
16gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.6
17ref|XM_428882.1| PREDICTED: Gallus gallus similar to leucine zip... 40 6.6
18gb|AC129014.4| Mus musculus BAC clone RP24-317F20 from chromosom... 40 6.6
19emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.6
20emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.6
21emb|CR558305.6| Zebrafish DNA sequence from clone DKEYP-87C9 in ... 40 6.6
22gb|AC005182.2| Homo sapiens 12p13.3 PAC RPCI1-29K11 (Roswell Par... 40 6.6
23gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Par... 40 6.6
24gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome ... 40 6.6
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
26gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.6
27gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complet... 40 6.6
28gb|AC093083.4| Homo sapiens BAC clone RP11-558I16 from 2, comple... 40 6.6
29gb|AC151730.5| Mus musculus BAC clone RP24-84E18 from chromosome... 40 6.6
30emb|AL954848.9| Zebrafish DNA sequence from clone CH211-281G7, c... 40 6.6
31gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 6.6
32emb|AL139175.15| Human DNA sequence from clone RP4-615P17 on chr... 40 6.6 
>gb|AY666013.1| Triticum aestivum cold acclimation induced protein 2-1 mRNA, complete
            cds
          Length = 1243

 Score =  387 bits (195), Expect = e-104
 Identities = 344/391 (87%), Gaps = 12/391 (3%)
 Strand = Plus / Minus

                                                                        
Query: 3    agctcaaacgtatctcttattattatttcacaatcggaaaacaaatact----cctacgt 58
            ||||||||||||||||||||||| ||||||| | ||||||||||||| |    | ||| |
Sbjct: 1225 agctcaaacgtatctcttattataatttcaccagcggaaaacaaatagtattacatacat 1166

                                                                        
Query: 59   acaaaggtaaaatcctctgcagagtatcagcggcatcatgcaatttttcacactatacaa 118
            ||||||||||| ||||||| ||||||| || ||||||  |||||||  ||||||||||||
Sbjct: 1165 acaaaggtaaa-tcctctgaagagtatgagtggcatctcgcaattta-cacactatacaa 1108

                                                                        
Query: 119  aagaacagagcactcagatagctagcatggcgtagccgatgcctgctgcaagcgtgccga 178
            ||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 aaggaaagaacactcagatagctagcatggcgtagccgatgcctgctgcaagcgtgccga 1048

                                                                        
Query: 179  tcagccctgccgtcaccggagcggccgcgcttcccggcgtggtcgcgctcgccccgccgg 238
            |||| ||||||||||||||||| |||||||||||||||||||||| | |||||||| |||
Sbjct: 1047 tcaggcctgccgtcaccggagcagccgcgcttcccggcgtggtcgagttcgccccgtcgg 988

                                                                        
Query: 239  cacccggcgccggcgggctgttcgcgtcggatccaggggtgcccggcgatgatccgcctc 298
            |  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||   
Sbjct: 987  cggccggcgccggcgggctgctcgtgtcggatccaggggtgcccggcgatgatccgc--- 931

                                                                        
Query: 299  cagctccaggtgttcccggtgacggagctagacctgtcggtgatggtggcgagtccgggg 358
               |||||||||| ||||| ||||||||| |||||| |||||||| ||||||| ||||||
Sbjct: 930  ---ctccaggtgtacccggcgacggagctggacctgccggtgatgctggcgagaccgggg 874

                                           
Query: 359  ttgccacgggagcaaccgtcggaggcatcgg 389
            ||| | |||||||| ||| ||||| ||||||
Sbjct: 873  ttgtcccgggagcagccgccggagtcatcgg 843



 Score =  141 bits (71), Expect = 2e-30
 Identities = 98/107 (91%)
 Strand = Plus / Minus

                                                                       
Query: 382 ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
           ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 838 ggcatcggttcgctggacggcggtgccatggaaggaggggacatcgggctgggcatcggc 779

                                                          
Query: 442 gcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
           ||| ||||||| || ||||||||||| || ||||||||||| |||||
Sbjct: 778 gcggcggacggcggtgtcatggaaggcggcgacatcgggctgggcat 732



 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                       
Query: 397 gacggcggtgtcatggaaggaggggacatcgggctcggcatcggcgcgccggacggtggc 456
           ||||||||||||||||| || || |||||||||||||||||||||||| ||||||| |||
Sbjct: 670 gacggcggtgtcatggacggtggtgacatcgggctcggcatcggcgcggcggacggcggc 611

                                           
Query: 457 gtcatggaaggaggggacatcgggctcggcat 488
           |||||||||||||| ||||||||||| |||||
Sbjct: 610 gtcatggaaggaggcgacatcgggctgggcat 579



 Score =  109 bits (55), Expect = 9e-21
 Identities = 94/107 (87%)
 Strand = Plus / Minus

                                                                       
Query: 382 ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
           ||||||||| || ||||||||||||||||||| || || ||||||||||| |||||||||
Sbjct: 736 ggcatcggtgcggcggacggcggtgtcatggacggtggtgacatcgggctgggcatcggc 677

                                                          
Query: 442 gcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
           ||| | ||||| || |||||||| || || |||||||||||||||||
Sbjct: 676 gcggctgacggcggtgtcatggacggtggtgacatcgggctcggcat 630



 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                       
Query: 382 ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
           ||||||||  || |||||||||||||||||||||| || ||||||||||| |||||||| 
Sbjct: 787 ggcatcggcgcggcggacggcggtgtcatggaaggcggcgacatcgggctgggcatcggt 728

                                                          
Query: 442 gcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
           ||| ||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 727 gcggcggacggcggtgtcatggacggtggtgacatcgggctgggcat 681



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 423 catcgggctcggcatcggcgcgccggacggtggcgtcatggaaggaggggacatcgggct 482
           ||||||||||||||||||  ||| |||||| || | ||||||||||||||||||||||||
Sbjct: 848 catcgggctcggcatcggttcgctggacggcggtgccatggaaggaggggacatcgggct 789

                 
Query: 483 cggcat 488
            |||||
Sbjct: 788 gggcat 783



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 382 ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
           ||||||||  || |||||||||| |||||||||||||| ||||||||||| ||||| |||
Sbjct: 634 ggcatcggcgcggcggacggcggcgtcatggaaggaggcgacatcgggctgggcatgggc 575

            
Query: 442 g 442
           |
Sbjct: 574 g 574
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>gb|AY666014.1| Thinopyrum elongatum early salt stress and cold acclimation-induced
            protein 2-1 (Esi2) gene, complete cds
          Length = 3027

 Score =  343 bits (173), Expect = 3e-91
 Identities = 335/387 (86%), Gaps = 14/387 (3%)
 Strand = Plus / Minus

                                                                        
Query: 3    agctcaaacgtatctcttattattatttcacaatcggaaaacaaatactcctacgtacaa 62
            ||||||||||||||||||||||| ||||||| ||||||||||||||||      ||||||
Sbjct: 2767 agctcaaacgtatctcttattataatttcaccatcggaaaacaaatac------gtacaa 2714

                                                                        
Query: 63   aggtaaaatcctctgcagagtatcagcggcatcatgcaatttttcacactatacaaaaga 122
            |||||||  |||||| |||||||  | | ||||  ||||||||| |||||||||||||||
Sbjct: 2713 aggtaaac-cctctgtagagtatgtgtgtcatctcgcaattttt-acactatacaaaaga 2656

                                                                        
Query: 123  acagagcactcagatagctagcatggcgtagccgatgcctgctgcaagcgtgccgatcag 182
            | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2655 aaagaacactcagatagcgagcatggcgtagccgatgcctgctgcaagcgtgccgatcag 2596

                                                                        
Query: 183  ccctgccgtcaccggagcggccgcgcttcccggcgtggtcgcgctcgccccgccggcacc 242
             |||||| || ||||||| ||| |||| || |||||||||| | |||||||| | || ||
Sbjct: 2595 gcctgccatcgccggagcagccccgctccctggcgtggtcgagttcgccccgtcagcgcc 2536

                                                                        
Query: 243  cggcgccggcgggctgttcgcgtcggatccaggggtgcccggcgatgatccgcctccagc 302
            |||||||||||||||| ||| ||||||||||||||||||||||||||||||||      |
Sbjct: 2535 cggcgccggcgggctgctcgtgtcggatccaggggtgcccggcgatgatccgc------c 2482

                                                                        
Query: 303  tccaggtgttcccggtgacggagctagacctgtcggtgatggtggcgagtccggggttgc 362
            ||||||||| ||||| ||||||||| |||   | ||||||||||||||||||||||||||
Sbjct: 2481 tccaggtgtacccggcgacggagctggactcattggtgatggtggcgagtccggggttgc 2422

                                       
Query: 363  cacgggagcaaccgtcggaggcatcgg 389
            | |||||||| ||| ||||| ||||||
Sbjct: 2421 cccgggagcagccgccggagacatcgg 2395



 Score =  125 bits (63), Expect = 1e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                        
Query: 382  ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
            ||||||||  || ||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 2390 ggcatcggcgcggcggacggcggtgtcatggaaggaggggacatcgggctgggcatgggc 2331

                                                           
Query: 442  gcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
            ||| ||||||| || ||||||||||| || ||||||||||| |||||
Sbjct: 2330 gcggcggacggcggtgtcatggaaggcggagacatcgggctgggcat 2284



 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  cggacggcggtgtcatggaaggaggggacatcgggctcggcatcggcgcgccggacggtg 454
            |||||||||||||||||||||| || ||||||||||| ||||| |||||| ||||||| |
Sbjct: 2326 cggacggcggtgtcatggaaggcggagacatcgggctgggcatgggcgcggcggacggcg 2267

                                              
Query: 455  gcgtcatggaaggaggggacatcgggctcggcat 488
            | ||||||||||| || ||||||||||| |||||
Sbjct: 2266 gtgtcatggaaggcggagacatcgggctgggcat 2233



 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  cggacggcggtgtcatggaaggaggggacatcgggctcggcatcggcgcgccggacggtg 454
            |||||||||||||||||||||| || ||||||||||| ||||| |||||| |||| || |
Sbjct: 2275 cggacggcggtgtcatggaaggcggagacatcgggctgggcatgggcgcggcggatggcg 2216

                                              
Query: 455  gcgtcatggaaggaggggacatcgggctcggcat 488
            | |||||||||||||| ||||||||||| |||||
Sbjct: 2215 gtgtcatggaaggaggcgacatcgggctgggcat 2182



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcgggctcggcatcggcgcgccggacggtggcgtcatggaaggaggggacatcggg 480
            |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 2402 gacatcgggctcggcatcggcgcggcggacggcggtgtcatggaaggaggggacatcggg 2343

                    
Query: 481  ctcggcat 488
            || |||||
Sbjct: 2342 ctgggcat 2335



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 395  cggacggcggtgtcatggaaggaggggacatcgggctcggcatcggcg 442
            |||| |||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 2224 cggatggcggtgtcatggaaggaggcgacatcgggctgggcatgggcg 2177
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>gb|AY666012.1| Thinopyrum elongatum early salt stress and cold acclimation-induced
            protein 2-3 (Esi2) mRNA, complete cds
          Length = 1220

 Score =  236 bits (119), Expect = 6e-59
 Identities = 176/195 (90%)
 Strand = Plus / Minus

                                                                        
Query: 107  cacactatacaaaagaacagagcactcagatagctagcatggcgtagccgatgcctgctg 166
            |||||| |||||||| | ||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 1111 cacactgtacaaaaggaaagaacactcagatagccagcatggcgtagccgatgcctgctg 1052

                                                                        
Query: 167  caagcgtgccgatcagccctgccgtcaccggagcggccgcgcttcccggcgtggtcgcgc 226
            |||||||||||||||| |||||| || ||||||| ||||||||||| |||||||||| | 
Sbjct: 1051 caagcgtgccgatcaggcctgccatcgccggagcagccgcgcttcctggcgtggtcgagt 992

                                                                        
Query: 227  tcgccccgccggcacccggcgccggcgggctgttcgcgtcggatccaggggtgcccggcg 286
             ||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 991  ccgccccatcggcacccggcgccggcgggctgttcgtgccggatccaggggtgcccggcg 932

                           
Query: 287  atgatccgcctccag 301
            |||| || |||||||
Sbjct: 931  atgacccccctccag 917



 Score =  127 bits (64), Expect = 4e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                       
Query: 381 aggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcgg 440
           |||||||||  | ||||| ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 639 aggcatcggcgcaccggatggcggtgtcatggaaggcggcgacatcgggctcggcatcgg 580

                                                           
Query: 441 cgcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
           |||| ||||||| |||||||||||||||||||||   |||||||||||
Sbjct: 579 cgcggcggacggcggcgtcatggaaggaggggacggggggctcggcat 532



 Score =  125 bits (63), Expect = 1e-25
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                       
Query: 394 ccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggcgcgccggacggt 453
           |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| 
Sbjct: 779 ccggacggcggtgtcatggaaggaggagacatcgggctgggcatcggcgcggcggacggc 720

                                              
Query: 454 ggcgtcatggaaggaggggacatcgggctcggcat 488
           || ||||||||||| || ||||||||||| |||||
Sbjct: 719 ggtgtcatggaaggcggcgacatcgggcttggcat 685



 Score =  125 bits (63), Expect = 1e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                       
Query: 382 ggcatcggttcgccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggc 441
           ||||||||  || |||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 740 ggcatcggcgcggcggacggcggtgtcatggaaggcggcgacatcgggcttggcatcggc 681

                                                          
Query: 442 gcgccggacggtggcgtcatggaaggaggggacatcgggctcggcat 488
           || |||||||| || |||||||||||||| ||||||||||| |||||
Sbjct: 680 gcaccggacggcggtgtcatggaaggaggagacatcgggctaggcat 634



 Score =  125 bits (63), Expect = 1e-25
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                       
Query: 394 ccggacggcggtgtcatggaaggaggggacatcgggctcggcatcggcgcgccggacggt 453
           |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| || 
Sbjct: 677 ccggacggcggtgtcatggaaggaggagacatcgggctaggcatcggcgcaccggatggc 618

                                              
Query: 454 ggcgtcatggaaggaggggacatcgggctcggcat 488
           || ||||||||||| || |||||||||||||||||
Sbjct: 617 ggtgtcatggaaggcggcgacatcgggctcggcat 583



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcgggctcggcatcggcgcgccggacggtggcgtcatggaaggaggggacatcggg 480
           ||||||||||||||| ||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 803 gacatcgggctcggcgtcggcgcaccggacggcggtgtcatggaaggaggagacatcggg 744

                   
Query: 481 ctcggcat 488
           || |||||
Sbjct: 743 ctgggcat 736



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 6    tcaaacgtatctcttattattatttcacaatcggaaaacaaatac 50
            |||||||| ||||||||||| ||||||| ||||||||| ||||||
Sbjct: 1202 tcaaacgtttctcttattataatttcaccatcggaaaataaatac 1158



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 343 ggtggcgagtccggggttgccacgggagcaa 373
           |||||||||||||| |||||| |||||||||
Sbjct: 902 ggtggcgagtccggagttgccccgggagcaa 872
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 132      tcagatagctagcatggcgtagccgatg 159
                ||||||||||||||||||||||||||||
Sbjct: 28004896 tcagatagctagcatggcgtagccgatg 28004923
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0547F09
          Length = 140615

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 132   tcagatagctagcatggcgtagccgatg 159
             ||||||||||||||||||||||||||||
Sbjct: 49715 tcagatagctagcatggcgtagccgatg 49742
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>dbj|AK107980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-E05, full
           insert sequence
          Length = 1091

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 132 tcagatagctagcatggcgtagccgatg 159
           ||||||||||||||||||||||||||||
Sbjct: 917 tcagatagctagcatggcgtagccgatg 890
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>gb|U51997.1| Caenorhabditis elegans cosmid F19G12, complete sequence
          Length = 28537

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   aatttttcacactatacaaaa 120
             |||||||||||||||||||||
Sbjct: 25592 aatttttcacactatacaaaa 25612
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>emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, complete sequence
          Length = 81343

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    atctcttattattatttcaca 34
             |||||||||||||||||||||
Sbjct: 64941 atctcttattattatttcaca 64921
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 209     ttcccggcgtggtcgcgctcg 229
               |||||||||||||||||||||
Sbjct: 1316956 ttcccggcgtggtcgcgctcg 1316976
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>gb|AF039080.1|AF039080 Sphaeropsis sapinea RNA virus 2, complete genome
          Length = 5202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 241  cccggcgccggcgggctgttc 261
            |||||||||||||||||||||
Sbjct: 1274 cccggcgccggcgggctgttc 1294
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>gb|U56963.1| Caenorhabditis elegans cosmid T13A10, complete sequence
          Length = 33735

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  aatttttcacactatacaaaa 120
            |||||||||||||||||||||
Sbjct: 1658 aatttttcacactatacaaaa 1678
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>gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, complete sequence
          Length = 196761

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 117    aaaagaacagagcactcagatagctagc 144
              |||||||||||||||||| ||| |||||
Sbjct: 176739 aaaagaacagagcactcaaatacctagc 176712
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>gb|AC119870.17| Mus musculus chromosome 3, clone RP24-261K17, complete sequence
          Length = 144502

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 117  aaaagaacagagcactcagatagctagc 144
            |||||||||||||||||| ||| |||||
Sbjct: 7605 aaaagaacagagcactcaaatacctagc 7578
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 422    acatcgggctcggcatcggcgcgc 445
              |||||||| |||||||||||||||
Sbjct: 939796 acatcgggttcggcatcggcgcgc 939819
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>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence
          Length = 114178

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   gtcgcgctcgccccgccggc 239
             ||||||||||||||||||||
Sbjct: 65872 gtcgcgctcgccccgccggc 65891
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ccgccggcacccggcgccggcggg 255
              ||||||||||||||||||| ||||
Sbjct: 340557 ccgccggcacccggcgccgccggg 340580
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>ref|XM_428882.1| PREDICTED: Gallus gallus similar to leucine zipper, putative tumor
            suppressor 1; F37/Esophageal cancer-related gene-coding
            leucine-zipper motif (LOC431331), mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  cctccagctccaggtgttcc 314
            ||||||||||||||||||||
Sbjct: 1011 cctccagctccaggtgttcc 1030
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>gb|AC129014.4| Mus musculus BAC clone RP24-317F20 from chromosome 19, complete sequence
          Length = 175855

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    gtcatggaaggaggggacat 425
              ||||||||||||||||||||
Sbjct: 155363 gtcatggaaggaggggacat 155382



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    gtcatggaaggaggggacat 476
              ||||||||||||||||||||
Sbjct: 155363 gtcatggaaggaggggacat 155382
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ccgccggcacccggcgccggcggg 255
              ||||||||||||||||||| ||||
Sbjct: 340495 ccgccggcacccggcgccgccggg 340518
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ccgccggcacccggcgccggcggg 255
              ||||||||||||||||||| ||||
Sbjct: 341497 ccgccggcacccggcgccgccggg 341520
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>emb|CR558305.6| Zebrafish DNA sequence from clone DKEYP-87C9 in linkage group 13,
             complete sequence
          Length = 86313

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tttcacactatacaaaagaa 123
             ||||||||||||||||||||
Sbjct: 85271 tttcacactatacaaaagaa 85290
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>gb|AC005182.2| Homo sapiens 12p13.3 PAC RPCI1-29K11 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 76201

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tttcacaatcggaaaacaaa 47
             ||||||||||||||||||||
Sbjct: 63823 tttcacaatcggaaaacaaa 63804
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>gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 212176

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    aaaagaacagagcactcaga 136
              ||||||||||||||||||||
Sbjct: 120600 aaaagaacagagcactcaga 120619
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>gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome 16, complete sequence
          Length = 172923

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tatctcttattattatttca 32
             ||||||||||||||||||||
Sbjct: 98278 tatctcttattattatttca 98297
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 424     atcgggctcggcatcggcgc 443
               ||||||||||||||||||||
Sbjct: 3438269 atcgggctcggcatcggcgc 3438288



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cccggcgtggtcgcgctcgc 230
              ||||||||||||||||||||
Sbjct: 650947 cccggcgtggtcgcgctcgc 650966
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     gccgatgcctgctgcaagcg 172
               ||||||||||||||||||||
Sbjct: 2433206 gccgatgcctgctgcaagcg 2433225
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>gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complete sequence
          Length = 167011

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 109   cactatacaaaagaacagagcactcaga 136
             ||||||| || |||||||||||||||||
Sbjct: 39391 cactatagaacagaacagagcactcaga 39418
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>gb|AC093083.4| Homo sapiens BAC clone RP11-558I16 from 2, complete sequence
          Length = 97512

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    cggaaaacaaatactcctac 56
             ||||||||||||||||||||
Sbjct: 83834 cggaaaacaaatactcctac 83853
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>gb|AC151730.5| Mus musculus BAC clone RP24-84E18 from chromosome 19, complete sequence
          Length = 222459

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   gtcatggaaggaggggacat 425
             ||||||||||||||||||||
Sbjct: 99392 gtcatggaaggaggggacat 99411



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   gtcatggaaggaggggacat 476
             ||||||||||||||||||||
Sbjct: 99392 gtcatggaaggaggggacat 99411
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>emb|AL954848.9| Zebrafish DNA sequence from clone CH211-281G7, complete sequence
          Length = 170178

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 tttcacactatacaaaagaa 123
           ||||||||||||||||||||
Sbjct: 958 tttcacactatacaaaagaa 977
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tcttattattatttcacaat 36
              ||||||||||||||||||||
Sbjct: 884561 tcttattattatttcacaat 884542
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>emb|AL139175.15| Human DNA sequence from clone RP4-615P17 on chromosome 1p13-14.3,
             complete sequence
          Length = 103718

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   ggtgtcatggaaggagggga 422
             ||||||||||||||||||||
Sbjct: 92706 ggtgtcatggaaggagggga 92725


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,083,778
Number of Sequences: 3902068
Number of extensions: 5083778
Number of successful extensions: 99113
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98267
Number of HSP's gapped (non-prelim): 841
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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