ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
2dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
3gb|AY103884.1| Zea mays PCO090977 mRNA sequence 202 8e-49
4gb|BT016671.1| Zea mays clone Contig504 mRNA sequence 174 2e-40
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
6dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
7dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
8gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds 76 1e-10
9dbj|D10422.1|RIC480 Oryza sativa mRNA for F1-ATPase (480 gene), ... 72 2e-09
10gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Ca... 46 0.11
11gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Canc... 46 0.11
12ref|XM_679703.1| PREDICTED: Danio rerio similar to IL-6 subfamil... 44 0.44
13ref|XM_678310.1| PREDICTED: Danio rerio similar to IL-6 subfamil... 44 0.44
14gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell ... 44 0.44
15emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in l... 44 0.44
16emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in... 44 0.44
17gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, co... 42 1.7
18gb|AY217336.1| Papaver somniferum S-adenosyl-L-methionine:coclau... 42 1.7
19ref|XM_686143.1| PREDICTED: Danio rerio similar to Heparin sulfa... 42 1.7
20gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosom... 42 1.7
21gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome... 42 1.7
22emb|BX649358.3| Zebrafish DNA sequence from clone CH211-69P6 in ... 42 1.7
23emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in l... 42 1.7
24gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, com... 42 1.7
25dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.7
26dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.7
27emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on ch... 42 1.7
28gb|AY441091.1| Armigeres subalbatus ASAP ID: 39599 putative: c-t... 40 6.9
29gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosom... 40 6.9
30emb|AL390959.12| Human DNA sequence from clone RP1-44L3 on chrom... 40 6.9
31emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chr... 40 6.9
32gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.9
33emb|AL139148.12| Human DNA sequence from clone RP4-630J13 on chr... 40 6.9
34gb|BC098580.1| Homo sapiens Rho GTPase activating protein 24, mR... 40 6.9
35emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chr... 40 6.9
36emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chr... 40 6.9
37gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, co... 40 6.9
38gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 6.9
39gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, com... 40 6.9
40gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, comple... 40 6.9
41gb|AC091629.1|AC091629 Mus musculus chromosome 11 map 11, 64cM, ... 40 6.9
42ref|XM_688792.1| PREDICTED: Danio rerio similar to bloodthirsty ... 40 6.9
43gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, com... 40 6.9
44tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein C... 40 6.9
45gb|AC131943.1| Homo sapiens BAC clone CTD-2242C10 from 4, comple... 40 6.9
46gb|AC096967.18| Homo sapiens 3 BAC RP11-200A1 (Roswell Park Canc... 40 6.9
47gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, comple... 40 6.9
48gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complet... 40 6.9
49gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Ca... 40 6.9
50emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chr... 40 6.9
51gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, com... 40 6.9
52emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on ch... 40 6.9
53gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromoso... 40 6.9
54emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on ch... 40 6.9
55gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, comple... 40 6.9
56dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.9
57emb|AL593843.9| Mouse DNA sequence from clone RP23-136D4 on chro... 40 6.9
58dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.9 
>dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I24, full
            insert sequence
          Length = 2362

 Score =  258 bits (130), Expect = 2e-65
 Identities = 235/270 (87%)
 Strand = Plus / Minus

                                                                        
Query: 238  cttttgatccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgct 297
            |||| ||||| ||||||||||| || |||||||||||||||||||||  |||||||||||
Sbjct: 2192 ctttcgatccaaaaggcagttagatatcaaggggttgcctcaagaacatctccatttgct 2133

                                                                        
Query: 298  tcgccctagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctc 357
            ||||||||||| |||||||||| ||||||||| |||||||||||| ||| || || ||||
Sbjct: 2132 tcgccctagtcttgatcgacatatcaaacaccttctgcccaaattgaataactagccctc 2073

                                                                        
Query: 358  ccatgatactctggtcaatcttttgttcaaccaagatggttttgtttttcccaaggatat 417
            ||||||| || | ||||||||| ||||||| |||||| |||||||| |||||||| ||||
Sbjct: 2072 ccatgatgctgtagtcaatcttctgttcaatcaagatagttttgttcttcccaagaatat 2013

                                                                        
Query: 418  ctcgcaaggtctccttaagttctttctcctccttctcaggaagtgcaacaacagtcctga 477
            || ||||||||||||||||||| |||||||| || || || |||| || ||| |||||||
Sbjct: 2012 cttgcaaggtctccttaagttccttctcctctttttcggggagtggaataactgtcctga 1953

                                          
Query: 478  caacaactttcacctcccccctgtgtgcca 507
            |||  || |||||||||||| | |||||||
Sbjct: 1952 caaggaccttcacctcccccttatgtgcca 1923



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 117  cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 176
            ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 2301 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaa--gatttatttcaagac 2244

                                    
Query: 177  cacatcgaagaagcagacatgagg 200
            || ||| ||| | |||||||||||
Sbjct: 2243 catatcaaagtaacagacatgagg 2220
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>dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086I22, full
           insert sequence
          Length = 1044

 Score =  258 bits (130), Expect = 2e-65
 Identities = 235/270 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 cttttgatccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgct 297
           |||| ||||| ||||||||||| || |||||||||||||||||||||  |||||||||||
Sbjct: 838 ctttcgatccaaaaggcagttagatatcaaggggttgcctcaagaacatctccatttgct 779

                                                                       
Query: 298 tcgccctagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctc 357
           ||||||||||| |||||||||| ||||||||| |||||||||||| ||| || || ||||
Sbjct: 778 tcgccctagtcttgatcgacatatcaaacaccttctgcccaaattgaataactagccctc 719

                                                                       
Query: 358 ccatgatactctggtcaatcttttgttcaaccaagatggttttgtttttcccaaggatat 417
           ||||||| || | ||||||||| ||||||| |||||| |||||||| |||||||| ||||
Sbjct: 718 ccatgatgctgtagtcaatcttctgttcaatcaagatagttttgttcttcccaagaatat 659

                                                                       
Query: 418 ctcgcaaggtctccttaagttctttctcctccttctcaggaagtgcaacaacagtcctga 477
           || ||||||||||||||||||| |||||||| || || || |||| || ||| |||||||
Sbjct: 658 cttgcaaggtctccttaagttccttctcctctttttcggggagtggaataactgtcctga 599

                                         
Query: 478 caacaactttcacctcccccctgtgtgcca 507
           |||  || |||||||||||| | |||||||
Sbjct: 598 caaggaccttcacctcccccttatgtgcca 569



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                       
Query: 117 cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 176
           ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 947 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaa--gatttatttcaagac 890

                                   
Query: 177 cacatcgaagaagcagacatgagg 200
           || ||| ||| | |||||||||||
Sbjct: 889 catatcaaagtaacagacatgagg 866
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>gb|AY103884.1| Zea mays PCO090977 mRNA sequence
          Length = 1134

 Score =  202 bits (102), Expect = 8e-49
 Identities = 216/254 (85%)
 Strand = Plus / Minus

                                                                       
Query: 244 atccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgcttcgccc 303
           |||| |||||| |||| | |||||| |||||||||||||||| |||||||||||||||||
Sbjct: 836 atccaaaaggctgttagaagtcaagtggttgcctcaagaacgcctccatttgcttcgccc 777

                                                                       
Query: 304 tagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctcccatga 363
           |  ||||||| || || |||| |||| ||||||| ||||||||||| | |||||||||||
Sbjct: 776 tgttcctgattgagatatcaagcaccttctgcccgaattcaatcactaatcctcccatga 717

                                                                       
Query: 364 tactctggtcaatcttttgttcaaccaagatggttttgtttttcccaaggatatctcgca 423
           | || | ||||||||| ||||||||||| || |||||||||| ||||||||||||  |||
Sbjct: 716 tgctgtagtcaatcttctgttcaaccaaaatagttttgttttccccaaggatatcctgca 657

                                                                       
Query: 424 aggtctccttaagttctttctcctccttctcaggaagtgcaacaacagtcctgacaacaa 483
           |||| ||||| |||||||||||||||| ||  |  |||| || ||| |||||||| ||||
Sbjct: 656 aggtttccttgagttctttctcctcctccttggtgagtgaaataactgtcctgaccacaa 597

                         
Query: 484 ctttcacctccccc 497
           | |||| |||||||
Sbjct: 596 ccttcatctccccc 583
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>gb|BT016671.1| Zea mays clone Contig504 mRNA sequence
          Length = 1081

 Score =  174 bits (88), Expect = 2e-40
 Identities = 200/236 (84%), Gaps = 1/236 (0%)
 Strand = Plus / Minus

                                                                       
Query: 263 gtcaaggggttgcctcaagaacgactccatttgcttcgccctagtcctgatcgac-atgt 321
           |||||| |||||||||||||||| ||||||||| ||||||||  ||||||| ||  || |
Sbjct: 775 gtcaagtggttgcctcaagaacgcctccatttggttcgccctgttcctgattgaggatat 716

                                                                       
Query: 322 caaacaccctctgcccaaattcaatcaccagtcctcccatgatactctggtcaatctttt 381
           ||| |||| ||||||| ||||||||||| | |||||||||||| || | ||||||||| |
Sbjct: 715 caagcaccttctgcccgaattcaatcactaatcctcccatgatgctgtagtcaatcttct 656

                                                                       
Query: 382 gttcaaccaagatggttttgtttttcccaaggatatctcgcaaggtctccttaagttctt 441
           |||||||||| || |||||||||| ||||||||||||  ||||||| ||||| |||||||
Sbjct: 655 gttcaaccaaaatagttttgttttccccaaggatatcctgcaaggtttccttgagttctt 596

                                                                   
Query: 442 tctcctccttctcaggaagtgcaacaacagtcctgacaacaactttcacctccccc 497
           ||||||||| ||  |  |||| || ||| |||||||| ||||| |||| |||||||
Sbjct: 595 tctcctcctccttggtgagtgaaataactgtcctgaccacaaccttcatctccccc 540
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  153 bits (77), Expect = 7e-34
 Identities = 125/141 (88%)
 Strand = Plus / Minus

                                                                            
Query: 238      cttttgatccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgct 297
                |||| ||||| ||||||||||| || |||||||||||||||||||||  |||||||||||
Sbjct: 26026981 ctttcgatccaaaaggcagttagatatcaaggggttgcctcaagaacatctccatttgct 26026922

                                                                            
Query: 298      tcgccctagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctc 357
                ||||||||||| |||||||||| ||||||||| |||||||||||| ||| || || ||||
Sbjct: 26026921 tcgccctagtcttgatcgacatatcaaacaccttctgcccaaattgaataactagccctc 26026862

                                     
Query: 358      ccatgatactctggtcaatct 378
                ||||||| || | ||||||||
Sbjct: 26026861 ccatgatgctgtagtcaatct 26026841



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 381      tgttcaaccaagatggttttgtttttcccaaggatatctcgcaaggtctccttaagttct 440
                ||||||| |||||| |||||||| |||||||| |||||| ||||||||||||||||||| 
Sbjct: 26026757 tgttcaatcaagatagttttgttcttcccaagaatatcttgcaaggtctccttaagttcc 26026698

                        
Query: 441      ttctcctc 448
                ||||||||
Sbjct: 26026697 ttctcctc 26026690



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                            
Query: 117      cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 176
                ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 26027090 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaa--gatttatttcaagac 26027033

                                        
Query: 177      cacatcgaagaagcagacatgagg 200
                || ||| ||| | |||||||||||
Sbjct: 26027032 catatcaaagtaacagacatgagg 26027009
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score =  153 bits (77), Expect = 7e-34
 Identities = 125/141 (88%)
 Strand = Plus / Minus

                                                                         
Query: 238   cttttgatccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgct 297
             |||| ||||| ||||||||||| || |||||||||||||||||||||  |||||||||||
Sbjct: 64839 ctttcgatccaaaaggcagttagatatcaaggggttgcctcaagaacatctccatttgct 64780

                                                                         
Query: 298   tcgccctagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctc 357
             ||||||||||| |||||||||| ||||||||| |||||||||||| ||| || || ||||
Sbjct: 64779 tcgccctagtcttgatcgacatatcaaacaccttctgcccaaattgaataactagccctc 64720

                                  
Query: 358   ccatgatactctggtcaatct 378
             ||||||| || | ||||||||
Sbjct: 64719 ccatgatgctgtagtcaatct 64699



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 381   tgttcaaccaagatggttttgtttttcccaaggatatctcgcaaggtctccttaagttct 440
             ||||||| |||||| |||||||| |||||||| |||||| ||||||||||||||||||| 
Sbjct: 64615 tgttcaatcaagatagttttgttcttcccaagaatatcttgcaaggtctccttaagttcc 64556

                     
Query: 441   ttctcctc 448
             ||||||||
Sbjct: 64555 ttctcctc 64548



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                         
Query: 117   cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 176
             ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 64948 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaa--gatttatttcaagac 64891

                                     
Query: 177   cacatcgaagaagcagacatgagg 200
             || ||| ||| | |||||||||||
Sbjct: 64890 catatcaaagtaacagacatgagg 64867
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062J02
          Length = 151636

 Score =  153 bits (77), Expect = 7e-34
 Identities = 125/141 (88%)
 Strand = Plus / Minus

                                                                        
Query: 238  cttttgatccgaaaggcagttacatgtcaaggggttgcctcaagaacgactccatttgct 297
            |||| ||||| ||||||||||| || |||||||||||||||||||||  |||||||||||
Sbjct: 6226 ctttcgatccaaaaggcagttagatatcaaggggttgcctcaagaacatctccatttgct 6167

                                                                        
Query: 298  tcgccctagtcctgatcgacatgtcaaacaccctctgcccaaattcaatcaccagtcctc 357
            ||||||||||| |||||||||| ||||||||| |||||||||||| ||| || || ||||
Sbjct: 6166 tcgccctagtcttgatcgacatatcaaacaccttctgcccaaattgaataactagccctc 6107

                                 
Query: 358  ccatgatactctggtcaatct 378
            ||||||| || | ||||||||
Sbjct: 6106 ccatgatgctgtagtcaatct 6086



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 381  tgttcaaccaagatggttttgtttttcccaaggatatctcgcaaggtctccttaagttct 440
            ||||||| |||||| |||||||| |||||||| |||||| ||||||||||||||||||| 
Sbjct: 6002 tgttcaatcaagatagttttgttcttcccaagaatatcttgcaaggtctccttaagttcc 5943

                    
Query: 441  ttctcctc 448
            ||||||||
Sbjct: 5942 ttctcctc 5935



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/84 (84%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 117  cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 176
            ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 6335 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaa--gatttatttcaagac 6278

                                    
Query: 177  cacatcgaagaagcagacatgagg 200
            || ||| ||| | |||||||||||
Sbjct: 6277 catatcaaagtaacagacatgagg 6254
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>gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds
          Length = 555

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 466 caacagtcctgacaacaactttcacctcccccctgtgtgcca 507
           |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 caacagtcctgacaacaactttcacctcccccctatgtgcca 500
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>dbj|D10422.1|RIC480 Oryza sativa mRNA for F1-ATPase (480 gene), partial sequence
          Length = 490

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                       
Query: 405 ttcccaaggatatctcgcaaggtctccttaagttctttctcctccttctcaggaagtgca 464
           |||||||| |||||| | ||||||||||||||| | |||||||| || || || |||| |
Sbjct: 228 ttcccaagaatatcttggaaggtctccttaagtgccttctcctctttttcggggagtgga 169

                                                      
Query: 465 acaacagtcctgacaacaactttcacctcccccctgtgtgcca 507
           | ||| ||||||||||  || |||||||||||| | |||||||
Sbjct: 168 ataactgtcctgacaagnaccttcacctcccccttatgtgcca 126
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>gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180454

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 146    ctcttgtaaaggaaagcttttatttca 172
              ||||||||||||||||| |||||||||
Sbjct: 134324 ctcttgtaaaggaaagcatttatttca 134350
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>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222518

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 146   ctcttgtaaaggaaagcttttatttca 172
             ||||||||||||||||| |||||||||
Sbjct: 27155 ctcttgtaaaggaaagcatttatttca 27181
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>ref|XM_679703.1| PREDICTED: Danio rerio similar to IL-6 subfamily-like cytokine M17
           (LOC556802), mRNA
          Length = 1083

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 443 ctcctccttctcaggaagtgca 464
           ||||||||||||||||||||||
Sbjct: 381 ctcctccttctcaggaagtgca 360
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>ref|XM_678310.1| PREDICTED: Danio rerio similar to IL-6 subfamily-like cytokine M17
           (LOC555717), mRNA
          Length = 1083

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 443 ctcctccttctcaggaagtgca 464
           ||||||||||||||||||||||
Sbjct: 381 ctcctccttctcaggaagtgca 360
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>gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 173810

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      caaaggaaaattacagacactt 22
              ||||||||||||||||||||||
Sbjct: 129602 caaaggaaaattacagacactt 129581
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>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete
              sequence
          Length = 243510

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 443    ctcctccttctcaggaagtgca 464
              ||||||||||||||||||||||
Sbjct: 171086 ctcctccttctcaggaagtgca 171107
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>emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in linkage group 7,
              complete sequence
          Length = 162525

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 443    ctcctccttctcaggaagtgca 464
              ||||||||||||||||||||||
Sbjct: 122444 ctcctccttctcaggaagtgca 122465
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>gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, complete sequence
          Length = 163348

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 437   ttctttctcctccttctcaggaagt 461
             ||||||||||||| |||||||||||
Sbjct: 40792 ttctttctcctccctctcaggaagt 40816
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>gb|AY217336.1| Papaver somniferum S-adenosyl-L-methionine:coclaurine
           N-methyltransferase mRNA, complete cds
          Length = 1286

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  atgtttttatccatgtttttc 72
           |||||||||||||||||||||
Sbjct: 968 atgtttttatccatgtttttc 948
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>ref|XM_686143.1| PREDICTED: Danio rerio similar to Heparin sulfate
            N-deacetylase/N-sulfotransferase (N-HSST) (N-heparin
            sulfate sulfotransferase) (Glucosaminyl
            N-deacetylase/N-sulfotransferase) (LOC562765), mRNA
          Length = 3737

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 15   agacacttgaattaaaaactttcca 39
            ||||||||||||||||| |||||||
Sbjct: 3258 agacacttgaattaaaagctttcca 3234
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>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence
          Length = 206481

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 427    tctccttaagttctttctcct 447
              |||||||||||||||||||||
Sbjct: 148893 tctccttaagttctttctcct 148913
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>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence
          Length = 177071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   gttctcttgtaaaggaaagct 163
             |||||||||||||||||||||
Sbjct: 62503 gttctcttgtaaaggaaagct 62523
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>emb|BX649358.3| Zebrafish DNA sequence from clone CH211-69P6 in linkage group 13,
            complete sequence
          Length = 181307

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 15   agacacttgaattaaaaactttcca 39
            ||||||||||||||||| |||||||
Sbjct: 8187 agacacttgaattaaaagctttcca 8211
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>emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in linkage group 13,
            complete sequence
          Length = 219382

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 15   agacacttgaattaaaaactttcca 39
            ||||||||||||||||| |||||||
Sbjct: 7880 agacacttgaattaaaagctttcca 7904
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>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence
          Length = 175751

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 427   tctccttaagttctttctcct 447
             |||||||||||||||||||||
Sbjct: 91396 tctccttaagttctttctcct 91376
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>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   tgtttttcccaaggatatctc 420
             |||||||||||||||||||||
Sbjct: 56199 tgtttttcccaaggatatctc 56219
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>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
              complete sequence
          Length = 133589

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    tgtttttcccaaggatatctc 420
              |||||||||||||||||||||
Sbjct: 128810 tgtttttcccaaggatatctc 128790
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>emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on chromosome 11, complete
             sequence
          Length = 189196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 437   ttctttctcctccttctcaggaagt 461
             ||||||||||||| |||||||||||
Sbjct: 83754 ttctttctcctccctctcaggaagt 83730
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>gb|AY441091.1| Armigeres subalbatus ASAP ID: 39599 putative: c-type lectin mRNA
           sequence
          Length = 613

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 398 tttgtttttcccaaggatatctcg 421
           |||||||||| |||||||||||||
Sbjct: 140 tttgtttttcgcaaggatatctcg 117
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>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete
             sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aggaaaattacagacacttg 23
             ||||||||||||||||||||
Sbjct: 57963 aggaaaattacagacacttg 57944
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>emb|AL390959.12| Human DNA sequence from clone RP1-44L3 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 105239

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   agttctttctcctccttctc 454
             ||||||||||||||||||||
Sbjct: 19179 agttctttctcctccttctc 19160
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>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete
              sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    aaggaaagcttttatttcaa 173
              ||||||||||||||||||||
Sbjct: 144253 aaggaaagcttttatttcaa 144234
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     ttcaagaccacatcgaagaa 188
               ||||||||||||||||||||
Sbjct: 1754831 ttcaagaccacatcgaagaa 1754812
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>emb|AL139148.12| Human DNA sequence from clone RP4-630J13 on chromosome 1p12-13.3
             Contains a high density lipoprotein binding protein
             (vigilin) (HDLBP) pseudogene, complete sequence
          Length = 92514

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tctcctcatgtttttatcca 64
             ||||||||||||||||||||
Sbjct: 53874 tctcctcatgtttttatcca 53855
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>gb|BC098580.1| Homo sapiens Rho GTPase activating protein 24, mRNA (cDNA clone
           MGC:111398 IMAGE:30923119), complete cds
          Length = 2768

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 ttctttctcctccttctcag 456
           ||||||||||||||||||||
Sbjct: 43  ttctttctcctccttctcag 24
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>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a
             PDZ domain containing guanine (Pdzgef1) pseudogene, a
             tubulin alpha 4 (Tuba4) pseudogene , an olfactory receptor
             pseudogene, a novel pseudogene and the 3' end of a novel
             gene, complete sequence
          Length = 108424

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   cttaagttctttctcctcct 450
             ||||||||||||||||||||
Sbjct: 73833 cttaagttctttctcctcct 73814
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>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a
              ribosomal protein 7a (Rpl7a) pseudogene, complete sequence
          Length = 161600

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     actttccatgacctctcctc 51
              ||||||||||||||||||||
Sbjct: 104488 actttccatgacctctcctc 104507
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>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence
          Length = 155985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    tccttaagttctttctcctc 448
              ||||||||||||||||||||
Sbjct: 108376 tccttaagttctttctcctc 108357
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 429     tccttaagttctttctcctc 448
               ||||||||||||||||||||
Sbjct: 1748625 tccttaagttctttctcctc 1748606
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>gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, complete sequence
          Length = 175125

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttctttctcctccttctcag 456
             ||||||||||||||||||||
Sbjct: 72524 ttctttctcctccttctcag 72543
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>gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, complete sequence
          Length = 160853

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ttctttctcctccttctcag 456
              ||||||||||||||||||||
Sbjct: 121147 ttctttctcctccttctcag 121128
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>gb|AC091629.1|AC091629 Mus musculus chromosome 11 map 11, 64cM, Band E1, complete sequence
          Length = 161334

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   tttctcctccttctcaggaa 459
             ||||||||||||||||||||
Sbjct: 66419 tttctcctccttctcaggaa 66438
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>ref|XM_688792.1| PREDICTED: Danio rerio similar to bloodthirsty (LOC565512), mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 accacatcgaagaagcagac 194
           ||||||||||||||||||||
Sbjct: 341 accacatcgaagaagcagac 322
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>gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, complete sequence
          Length = 191682

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaatgaaattaagattgttc 97
             ||||||||||||||||||||
Sbjct: 37630 aaatgaaattaagattgttc 37611
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>tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein COP1 gene, complete cds
          Length = 421987

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ttctttctcctccttctcag 456
              ||||||||||||||||||||
Sbjct: 322419 ttctttctcctccttctcag 322400
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>gb|AC131943.1| Homo sapiens BAC clone CTD-2242C10 from 4, complete sequence
          Length = 135585

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cgaagaagcagacatgaggg 201
             ||||||||||||||||||||
Sbjct: 93455 cgaagaagcagacatgaggg 93436
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>gb|AC096967.18| Homo sapiens 3 BAC RP11-200A1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 123251

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 429   tccttaagttctttctcctccttc 452
             ||||||| ||||||||||||||||
Sbjct: 76658 tccttaacttctttctcctccttc 76635
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>gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, complete sequence
          Length = 199218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     atgtttttatccatgttttt 71
              ||||||||||||||||||||
Sbjct: 194816 atgtttttatccatgttttt 194797
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>gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complete sequence
          Length = 207516

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   ttctttctcctccttctcag 456
             ||||||||||||||||||||
Sbjct: 86718 ttctttctcctccttctcag 86699
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>gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188972

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gtaaaggaaagcttttattt 170
              ||||||||||||||||||||
Sbjct: 143151 gtaaaggaaagcttttattt 143132
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>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete
              sequence
          Length = 192196

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    ctcttgtaaaggaaagcttttatt 169
              ||||||||||||||||| ||||||
Sbjct: 165500 ctcttgtaaaggaaagcatttatt 165523
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>gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, complete sequence
          Length = 203785

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaatgaaattaagattgttc 97
             ||||||||||||||||||||
Sbjct: 86551 aaatgaaattaagattgttc 86570
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>emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on chromosome 2, complete
             sequence
          Length = 206918

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   aacaacagtcctgacaacaa 483
             ||||||||||||||||||||
Sbjct: 80601 aacaacagtcctgacaacaa 80620
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>gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromosome ul, complete sequence
          Length = 245010

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 437    ttctttctcctccttctcaggaag 460
              |||||||||||||||||| |||||
Sbjct: 236807 ttctttctcctccttctctggaag 236830
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>emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on chromosome 1 Contains part
             of the gene for constitutive photomorphogenic protein
             (COP1) and a novel gene, complete sequence
          Length = 178223

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttctttctcctccttctcag 456
             ||||||||||||||||||||
Sbjct: 20151 ttctttctcctccttctcag 20170
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>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence
          Length = 172079

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      aaattacagacacttgaattaaaa 31
              ||||||||||||||||| ||||||
Sbjct: 103111 aaattacagacacttgacttaaaa 103088
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>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete
             sequence
          Length = 171200

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    catgtttttcggtagaaatgaaat 86
             |||||||||||| |||||||||||
Sbjct: 54816 catgtttttcggaagaaatgaaat 54839
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>emb|AL593843.9| Mouse DNA sequence from clone RP23-136D4 on chromosome 11, complete
              sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    tttctcctccttctcaggaa 459
              ||||||||||||||||||||
Sbjct: 159312 tttctcctccttctcaggaa 159331
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>dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1931E2, complete
              sequence
          Length = 159287

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ttctttctcctccttctcag 456
              ||||||||||||||||||||
Sbjct: 135651 ttctttctcctccttctcag 135632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,247,720
Number of Sequences: 3902068
Number of extensions: 7247720
Number of successful extensions: 165566
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165324
Number of HSP's gapped (non-prelim): 236
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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