Clone Name | rbart12f12 |
---|---|
Clone Library Name | barley_pub |
>PLD2_MOUSE (P97813) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase| 2) (Phosphatidylcholine-hydrolyzing phospholipase D2) (PLD1C) (mPLD2) Length = 933 Score = 36.6 bits (83), Expect = 0.035 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 324 REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQPPLDSHHAL 476 RE VAV L + + + +L H+ L+H PL L+ + L PPL S + Sbjct: 876 REYVAVESLATVSPSLAQSELAHIQGHLVHFPLKFLEDESLLPPLGSKEGM 926
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 28.9 bits (63), Expect(2) = 0.23 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 131 RTRYAPHPQRRRAASPGLAPECTVWPPPAE 220 R+ PHP++R ASP +P + P P+E Sbjct: 180 RSTPIPHPRKRSPASPSPSPSLSKSPSPSE 209 Score = 23.9 bits (50), Expect(2) = 0.23 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 Query: 51 KSTTPLSLPPVRRPGYPRLPSPS 119 +S+TP+ PP R P PSPS Sbjct: 146 RSSTPIPHPPRRSLPSPPSPSPS 168
>LGUL_MOUSE (Q9CPU0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 183 Score = 33.5 bits (75), Expect = 0.30 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -3 Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICNCDNLPVV 318 +R +ELG++++K+ + G F DPDG+ IEI N + + + Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILNPNKIATI 182
>LGUL_RAT (Q6P7Q4) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 183 Score = 33.1 bits (74), Expect = 0.39 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = -3 Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICNCDNLPVV 318 +R +ELG++++K+ + G F DPDG+ IEI N + + + Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFVQDPDGYWIEILNPNKMATI 182
>LGUL_MACFA (Q4R5F2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 183 Score = 32.7 bits (73), Expect = 0.51 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -3 Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICN 339 +R +ELG++++K+ + G F DPDG+ IEI N Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILN 175
>LGUL_HUMAN (Q04760) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 183 Score = 32.7 bits (73), Expect = 0.51 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -3 Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICN 339 +R +ELG++++K+ + G F DPDG+ IEI N Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILN 175
>PLD2_HUMAN (O14939) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase| 2) (Phosphatidylcholine-hydrolyzing phospholipase D2) (PLD1C) (hPLD2) Length = 933 Score = 32.0 bits (71), Expect = 0.87 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +3 Query: 324 REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQPPLDSHHAL 476 RE VAV L + + +L V L+H PL L+ + L PPL S + Sbjct: 876 REYVAVEPLATVSPPLARSELTQVQGHLVHFPLKFLEDESLLPPLGSKEGM 926
>BLNK_CHICK (Q9YGC1) B-cell linker protein (Cytoplasmic adapter protein)| (B-cell adapter SH2 domain-containing protein) Length = 552 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +3 Query: 54 STTPLSLPPVRR----PGYPRLPSPSHPSRARDMRHI 152 ST P + PPV R P LP+P PS A DM+ + Sbjct: 212 STPPPAKPPVNRFMKPPAKSALPTPPKPSLASDMQEV 248
>PLD2_RAT (P70498) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase| 2) (Phosphatidylcholine-hydrolyzing phospholipase D2) (PLD1C) (rPLD2) Length = 933 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +3 Query: 324 REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQP 452 RE VAV L + + + +L H+ L+H PL L+ + L P Sbjct: 876 REYVAVESLATVSPSLAQSELAHIRGHLVHFPLKFLEDESLLP 918
>CN021_MOUSE (Q8BMC4) Protein C14orf21 homolog| Length = 636 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 75 PPVRRPGYPRLPSPSHPSRARDMRHILSADAL 170 PP R GYPRLP+ + +A + LS +AL Sbjct: 31 PPPGRDGYPRLPAAARAEQAPEALPHLSPEAL 62
>PEPX_STRMU (Q8DVS2) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro| dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 758 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -3 Query: 473 SMVAVERRLKELGIQYIKRCVEEGGIN--VDQIFFHDPD 363 S+ E+ LKELG Q + + + V Q++FH+PD Sbjct: 12 SVSQAEKELKELGFQISSQKTNKANLATFVSQVYFHNPD 50
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -3 Query: 458 ERRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEI 345 E++L +LG+ +K G + D I+F DPDG E+ Sbjct: 84 EKKLHDLGVNVLKGRKRHEG-DRDSIYFSDPDGHKFEL 120
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 25.8 bits (55), Expect(2) = 7.0 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 146 PHPQRRRAASPGLAPECTVWPPP 214 P P RA P +AP +++PPP Sbjct: 467 PPPPPPRAGPPRMAPPLSLFPPP 489 Score = 21.6 bits (44), Expect(2) = 7.0 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = +3 Query: 63 PLSLPPVRRPGYPRLPSPSHP 125 P LPP PG P P P P Sbjct: 421 PRLLPPGPPPGRPPGPPPGPP 441
>NPBL_COPCI (Q00333) Protein rad9 (SCC2 homolog)| Length = 2157 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 143 APHPQRRRAASPGLAPECTVWPPPA 217 AP PQ A P P+ TV+PPP+ Sbjct: 230 APLPQPAPAPQPAPVPQATVFPPPS 254
>TRMB_IDILO (Q5QY61) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 245 Score = 28.9 bits (63), Expect = 7.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDP 366 R E ++ +K+C+ + +N QIFF DP Sbjct: 116 RVFHEDAVEVLKQCIPDNSLNCVQIFFPDP 145
>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)| Length = 485 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = +3 Query: 36 SYQCTKSTTPLSLPPVRRPGYPRLPSPSHP 125 S Q T S+ P S PP RP P PSPS P Sbjct: 232 SPQPTASSRPPSPPPSPRPPSPPPPSPSPP 261
>CU121_HUMAN (Q8N0V1) Protein C21orf121| Length = 137 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 Query: 6 CSHVLFIRALSYQCTKSTTPLSLPPVRRPGYPRLPSPSHPSRA 134 C+ + + A+++ TK PLS + RPG+ LP PS P A Sbjct: 64 CASLCRVLAVTWSLTKLPFPLSPILLSRPGW--LPQPSSPGPA 104
>LGUL_BRAJU (O04885) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) Length = 185 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -3 Query: 452 RLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEI 345 R ++LG++++K+ + N+ F DPDG+ IEI Sbjct: 138 RFEQLGVEFVKKPHDGKMKNI--AFIKDPDGYWIEI 171
>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +3 Query: 261 LDGGEPLAGGH-GERLVGERDDREVVAVADLDHEAV 365 L+ EP+ G H G R++ D+E V ADLD EA+ Sbjct: 452 LEEAEPIPGIHWGVRVLHPPPDQENVQYADLDFEAI 487 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,191,510 Number of Sequences: 219361 Number of extensions: 1130754 Number of successful extensions: 5521 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 5018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5505 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)