ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLD2_MOUSE (P97813) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choli... 37 0.035
2NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 29 0.23
3LGUL_MOUSE (Q9CPU0) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 33 0.30
4LGUL_RAT (Q6P7Q4) Lactoylglutathione lyase (EC 4.4.1.5) (Methylg... 33 0.39
5LGUL_MACFA (Q4R5F2) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 33 0.51
6LGUL_HUMAN (Q04760) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 33 0.51
7PLD2_HUMAN (O14939) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choli... 32 0.87
8BLNK_CHICK (Q9YGC1) B-cell linker protein (Cytoplasmic adapter p... 30 3.3
9PLD2_RAT (P70498) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline... 30 3.3
10CN021_MOUSE (Q8BMC4) Protein C14orf21 homolog 29 5.6
11PEPX_STRMU (Q8DVS2) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) ... 29 5.6
12FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (... 29 5.6
13WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11) 26 7.0
14NPBL_COPCI (Q00333) Protein rad9 (SCC2 homolog) 29 7.3
15TRMB_IDILO (Q5QY61) tRNA (guanine-N(7)-)-methyltransferase (EC 2... 29 7.3
16SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor ... 29 7.3
17CU121_HUMAN (Q8N0V1) Protein C21orf121 28 9.6
18LGUL_BRAJU (O04885) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 28 9.6
19ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) ... 28 9.6

>PLD2_MOUSE (P97813) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase|
            2) (Phosphatidylcholine-hydrolyzing phospholipase D2)
            (PLD1C) (mPLD2)
          Length = 933

 Score = 36.6 bits (83), Expect = 0.035
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 324  REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQPPLDSHHAL 476
            RE VAV  L   +  + + +L H+   L+H PL  L+ + L PPL S   +
Sbjct: 876  REYVAVESLATVSPSLAQSELAHIQGHLVHFPLKFLEDESLLPPLGSKEGM 926



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 28.9 bits (63), Expect(2) = 0.23
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 131 RTRYAPHPQRRRAASPGLAPECTVWPPPAE 220
           R+   PHP++R  ASP  +P  +  P P+E
Sbjct: 180 RSTPIPHPRKRSPASPSPSPSLSKSPSPSE 209



 Score = 23.9 bits (50), Expect(2) = 0.23
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 51  KSTTPLSLPPVRRPGYPRLPSPS 119
           +S+TP+  PP R    P  PSPS
Sbjct: 146 RSSTPIPHPPRRSLPSPPSPSPS 168



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>LGUL_MOUSE (Q9CPU0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde
           mutase) (S-D-lactoylglutathione methylglyoxal lyase)
          Length = 183

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICNCDNLPVV 318
           +R +ELG++++K+   + G      F  DPDG+ IEI N + +  +
Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILNPNKIATI 182



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>LGUL_RAT (Q6P7Q4) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde
           mutase) (S-D-lactoylglutathione methylglyoxal lyase)
          Length = 183

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICNCDNLPVV 318
           +R +ELG++++K+   + G      F  DPDG+ IEI N + +  +
Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFVQDPDGYWIEILNPNKMATI 182



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>LGUL_MACFA (Q4R5F2) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde
           mutase) (S-D-lactoylglutathione methylglyoxal lyase)
          Length = 183

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICN 339
           +R +ELG++++K+   + G      F  DPDG+ IEI N
Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILN 175



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>LGUL_HUMAN (Q04760) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde
           mutase) (S-D-lactoylglutathione methylglyoxal lyase)
          Length = 183

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEICN 339
           +R +ELG++++K+   + G      F  DPDG+ IEI N
Sbjct: 139 KRFEELGVKFVKK--PDDGKMKGLAFIQDPDGYWIEILN 175



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>PLD2_HUMAN (O14939) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase|
            2) (Phosphatidylcholine-hydrolyzing phospholipase D2)
            (PLD1C) (hPLD2)
          Length = 933

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 324  REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQPPLDSHHAL 476
            RE VAV  L   +  +   +L  V   L+H PL  L+ + L PPL S   +
Sbjct: 876  REYVAVEPLATVSPPLARSELTQVQGHLVHFPLKFLEDESLLPPLGSKEGM 926



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>BLNK_CHICK (Q9YGC1) B-cell linker protein (Cytoplasmic adapter protein)|
           (B-cell adapter SH2 domain-containing protein)
          Length = 552

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +3

Query: 54  STTPLSLPPVRR----PGYPRLPSPSHPSRARDMRHI 152
           ST P + PPV R    P    LP+P  PS A DM+ +
Sbjct: 212 STPPPAKPPVNRFMKPPAKSALPTPPKPSLASDMQEV 248



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>PLD2_RAT (P70498) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase|
            2) (Phosphatidylcholine-hydrolyzing phospholipase D2)
            (PLD1C) (rPLD2)
          Length = 933

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 324  REVVAVADLDHEAVGVVEEDLVHVDAPLLHAPLDVLDAQLLQP 452
            RE VAV  L   +  + + +L H+   L+H PL  L+ + L P
Sbjct: 876  REYVAVESLATVSPSLAQSELAHIRGHLVHFPLKFLEDESLLP 918



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>CN021_MOUSE (Q8BMC4) Protein C14orf21 homolog|
          Length = 636

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 75  PPVRRPGYPRLPSPSHPSRARDMRHILSADAL 170
           PP  R GYPRLP+ +   +A +    LS +AL
Sbjct: 31  PPPGRDGYPRLPAAARAEQAPEALPHLSPEAL 62



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>PEPX_STRMU (Q8DVS2) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro|
           dipeptidyl-peptidase) (X-prolyl-dipeptidyl
           aminopeptidase) (X-PDAP)
          Length = 758

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 473 SMVAVERRLKELGIQYIKRCVEEGGIN--VDQIFFHDPD 363
           S+   E+ LKELG Q   +   +  +   V Q++FH+PD
Sbjct: 12  SVSQAEKELKELGFQISSQKTNKANLATFVSQVYFHNPD 50



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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 458 ERRLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEI 345
           E++L +LG+  +K      G + D I+F DPDG   E+
Sbjct: 84  EKKLHDLGVNVLKGRKRHEG-DRDSIYFSDPDGHKFEL 120



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>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)|
          Length = 640

 Score = 25.8 bits (55), Expect(2) = 7.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 146 PHPQRRRAASPGLAPECTVWPPP 214
           P P   RA  P +AP  +++PPP
Sbjct: 467 PPPPPPRAGPPRMAPPLSLFPPP 489



 Score = 21.6 bits (44), Expect(2) = 7.0
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 63  PLSLPPVRRPGYPRLPSPSHP 125
           P  LPP   PG P  P P  P
Sbjct: 421 PRLLPPGPPPGRPPGPPPGPP 441



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>NPBL_COPCI (Q00333) Protein rad9 (SCC2 homolog)|
          Length = 2157

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 143 APHPQRRRAASPGLAPECTVWPPPA 217
           AP PQ   A  P   P+ TV+PPP+
Sbjct: 230 APLPQPAPAPQPAPVPQATVFPPPS 254



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>TRMB_IDILO (Q5QY61) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 245

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 455 RRLKELGIQYIKRCVEEGGINVDQIFFHDP 366
           R   E  ++ +K+C+ +  +N  QIFF DP
Sbjct: 116 RVFHEDAVEVLKQCIPDNSLNCVQIFFPDP 145



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>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)|
          Length = 485

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +3

Query: 36  SYQCTKSTTPLSLPPVRRPGYPRLPSPSHP 125
           S Q T S+ P S PP  RP  P  PSPS P
Sbjct: 232 SPQPTASSRPPSPPPSPRPPSPPPPSPSPP 261



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>CU121_HUMAN (Q8N0V1) Protein C21orf121|
          Length = 137

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 6   CSHVLFIRALSYQCTKSTTPLSLPPVRRPGYPRLPSPSHPSRA 134
           C+ +  + A+++  TK   PLS   + RPG+  LP PS P  A
Sbjct: 64  CASLCRVLAVTWSLTKLPFPLSPILLSRPGW--LPQPSSPGPA 104



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>LGUL_BRAJU (O04885) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde
           mutase) (S-D-lactoylglutathione methylglyoxal lyase)
          Length = 185

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 452 RLKELGIQYIKRCVEEGGINVDQIFFHDPDGFMIEI 345
           R ++LG++++K+  +    N+   F  DPDG+ IEI
Sbjct: 138 RFEQLGVEFVKKPHDGKMKNI--AFIKDPDGYWIEI 171



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>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 261 LDGGEPLAGGH-GERLVGERDDREVVAVADLDHEAV 365
           L+  EP+ G H G R++    D+E V  ADLD EA+
Sbjct: 452 LEEAEPIPGIHWGVRVLHPPPDQENVQYADLDFEAI 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,191,510
Number of Sequences: 219361
Number of extensions: 1130754
Number of successful extensions: 5521
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5505
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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