>SC6A2_BOVIN (P51143) Sodium-dependent noradrenaline transporter (Norepinephrine|
           transporter) (NET)
          Length = 615

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -1

Query: 179 WR--WPFMELTLKYSVVAKS--DM*PFFVDDYVFP--AHWIFWLVPG 57
           WR  W F+       VV  S  +  P   DDY+FP  A+W+ W + G
Sbjct: 515 WRLCWKFVSPAFLLFVVIVSIINFKPLTYDDYIFPLWANWVGWGIAG 561

>YJA1_SCHPO (Q9USN4) Putative transporter C1529.01|
          Length = 462

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 80  WIFWLVPGKGGFIYFGSHPVLTETF 6
           WIFW      GFI+  S P+L ET+
Sbjct: 202 WIFWSTTIFSGFIFALSLPLLAETY 226

>ESPP_ECOLI (O32591) Serine protease espP precursor (EC 3.4.21.-)|
           (Extracellular serine protease plasmid-encoded espP)
          Length = 1300

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 94  T*SSTKKGHISLFATTEYFNVSSMNGHLHALCIYHDNPKKE 216
           T +STKK  +SL  T +Y    ++NG+L  L   H   KKE
Sbjct: 502 TNTSTKKSILSLNNTADYIYHGNINGNLDVL--QHHETKKE 540

>ESPP_ECO57 (Q7BSW5) Serine protease espP precursor (EC 3.4.21.-)|
           (Extracellular serine protease plasmid-encoded espP)
          Length = 1300

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 94  T*SSTKKGHISLFATTEYFNVSSMNGHLHALCIYHDNPKKE 216
           T +STKK  +SL  T +Y    ++NG+L  L   H   KKE
Sbjct: 502 TNTSTKKSILSLNNTADYIYHGNINGNLDVL--QHHETKKE 540

>RP1_PAPHA (Q8MJ06) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1|
           protein homolog)
          Length = 2152

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 55  LPGTSQKIQ*AGNT*SSTKK--GHISLFATTEYFNVSSMNGH 174
           LPG SQ++   GN  S ++K   H+S  + ++ ++VSS   H
Sbjct: 243 LPGISQRVYPKGNAKSESRKISTHMSSSSRSQIYSVSSEKTH 284

>RP1_HUMAN (P56715) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1|
           protein) (Retinitis pigmentosa 1 protein)
          Length = 2156

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 55  LPGTSQKIQ*AGNT*SSTKK--GHISLFATTEYFNVSSMNGH 174
           LPG SQ++   GN  S ++K   H+S  + ++ ++VSS   H
Sbjct: 243 LPGISQRVYPKGNAKSESRKISTHMSSSSRSQIYSVSSEKTH 284

>RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1|
           protein homolog)
          Length = 2141

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 55  LPGTSQKIQ*AGNT*SSTKK--GHISLFATTEYFNVSSMNGHLHALCIYHDN 204
           LPGTS  +   GNT S ++K   H+     ++ ++VSS  G +H    Y D+
Sbjct: 245 LPGTSHHVYIKGNTRSESRKMSTHVPSSPRSQIYSVSS--GKMHNNDCYSDH 294

>SC6A2_HUMAN (P23975) Sodium-dependent noradrenaline transporter (Norepinephrine|
           transporter) (NET)
          Length = 617

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 179 WR--WPFMELTLKYSVVAKS--DM*PFFVDDYVFP--AHWIFW 69
           WR  W F+       VV  S  +  P   DDY+FP  A+W+ W
Sbjct: 517 WRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYIFPPWANWVGW 559

>K0776_HUMAN (O94874) Protein KIAA0776|
          Length = 794

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 53  LYRALAKRSSEPEIHNHPQRKVTYHSLQQLNILTS 157
           L+R L  + +E E+ N+P   +T   L+Q++ L S
Sbjct: 375 LFRELMHQKAEKEMKNNPVHLITEEDLKQISTLES 409

>RDRP_BPFR (P15965) RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA|
           replicase beta chain)
          Length = 545

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 152 LKYSVVAKSDM*PFFVDDYVFPAHWIFWLVPGKGGF 45
           LK +V+ K    P+    +VFP  + F LV G G F
Sbjct: 159 LKAAVLVKDQCSPWIRHSHVFPESYTFRLVGGNGVF 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,110,351
Number of Sequences: 219361
Number of extensions: 921219
Number of successful extensions: 1896
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)