ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46... 29 2.9

>DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 292

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -2

Query: 208 GCHPQDDVARGKMKRVLARVMLSG---AFLSSVCYCFLCSC 95
           G HP++ V+ GK+K    RV++ G     L  + YC L  C
Sbjct: 251 GAHPREAVSWGKIKESSRRVVVYGDATITLPVIAYCLLHGC 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,538,604
Number of Sequences: 219361
Number of extensions: 382552
Number of successful extensions: 906
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top