>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score =  640 bits (323), Expect = 0.0
 Identities = 332/335 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggcaccaacgttgctataattgatttagggaagtgcataggctaaaacattaggaccaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 ggcaccaacgttgctataattgatttagggaagtgcataggctaaaacattaggaccaca 1337

                                                                        
Query: 61   agttccgcaaaaagcgggagtaatacaaacagccaggccttgtatataaagtttctaata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 agttccgcaaaaagcgggagtaatacaaacagccaggccttgtatataaagtttctaata 1277

                                                                        
Query: 121  atacaatctttcaagggaacgacaaaggggtaattggtttattggaactcaaattccgta 180
            ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1276 atacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccgta 1217

                                                                        
Query: 181  acgaaacacagcaacgaatattgacgaacccagccaactatgagtatgctctggcaaatt 240
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1216 acgaaacacagcaacgaatattgacgaacccacccaactatgagtatgctctggcaaatt 1157

                                                                        
Query: 241  ggtgatgtacgccaaacgcagggaagtggccttaggccttggccttcttgggcactgcca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 ggtgatgtacgccaaacgcagggaagtggccttaggccttggccttcttgggcactgcca 1097

                                               
Query: 301  aacgctcccggaagtcgtcctccatgagcaccaag 335
            |||||||||||||||||||||||||||||||||||
Sbjct: 1096 aacgctcccggaagtcgtcctccatgagcaccaag 1062

>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 272  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 331
            ||||||||| | || ||||||||| ||||  |||||||||||||| ||||||||||||||
Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232

                
Query: 332  caag 335
            ||||
Sbjct: 1231 caag 1228



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 119  taatacaatctttcaagggaacgacaaaggggtaattggtttattggaactcaaattccg 178
            ||||||||||||||||  ||||||||| |  ||| |  ||||||||||||||||||||||
Sbjct: 1419 taatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccg 1360

                    
Query: 179  taacgaaa 186
            ||| ||||
Sbjct: 1359 taatgaaa 1352



 Score = 46.1 bits (23), Expect = 0.072
 Identities = 61/71 (85%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                        
Query: 6    caacgttgctataattgatttagggaagtgcataggcta-aaacattaggaccacaagtt 64
            |||| |||||||||| |||||||||| || |||| |||| |||||| || ||||||||||
Sbjct: 1527 caacattgctataatcgatttaggga-gtacataagctacaaacataagtaccacaagtt 1469

                       
Query: 65   ccgcaaaaagc 75
            | | |||||||
Sbjct: 1468 ctgtaaaaagc 1458

>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 272  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 331
            |||||||||||  ||||||||||| ||||  ||||||||||| || ||||||||||||||
Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476

                
Query: 332  caag 335
            ||||
Sbjct: 1475 caag 1472



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 157  gtttattggaactcaaattccgtaacgaaa 186
            ||||||||||||||||||||||||| ||||
Sbjct: 1639 gtttattggaactcaaattccgtaatgaaa 1610

>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 304 gctcccggaagtcgtcctccatgagcaccaag 335
           |||||||||| || ||||||||||||||||||
Sbjct: 787 gctcccggaaatcatcctccatgagcaccaag 756



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 162 ttggaactcaaattccgtaacgaaa 186
           |||||||||||||||||||| ||||
Sbjct: 921 ttggaactcaaattccgtaatgaaa 897

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 271     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233

                    
Query: 331     ccaag 335
               |||||
Sbjct: 9412232 ccaag 9412228



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 6       caacgttgctataattgatttagg 29
               |||| |||||||||||||||||||
Sbjct: 9412547 caacattgctataattgatttagg 9412524

>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190237

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 139   acgacaaaggggtaattggtttatt 163
             |||||||| ||||||||||||||||
Sbjct: 10491 acgacaaaagggtaattggtttatt 10467

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 271    cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
              ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633

                   
Query: 331    ccaag 335
              |||||
Sbjct: 109632 ccaag 109628



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      caacgttgctataattgatttagg 29
              |||| |||||||||||||||||||
Sbjct: 109947 caacattgctataattgatttagg 109924

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 271     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354

                    
Query: 331     ccaag 335
               |||||
Sbjct: 9410353 ccaag 9410349



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 6       caacgttgctataattgatttagg 29
               |||| |||||||||||||||||||
Sbjct: 9410668 caacattgctataattgatttagg 9410645

>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1053

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 303  cgctcccggaagtcgtcctccatgagcaccaag 335
            ||||||||||| || || |||||||||||||||
Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaag 990

>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 271  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483

                 
Query: 331  ccaag 335
            |||||
Sbjct: 1482 ccaag 1478



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 6    caacgttgctataattgatttagg 29
            |||| |||||||||||||||||||
Sbjct: 1797 caacattgctataattgatttagg 1774

>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 271 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
           ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148

                
Query: 331 ccaag 335
           |||||
Sbjct: 147 ccaag 143



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   caacgttgctataattgatttagg 29
           |||| |||||||||||||||||||
Sbjct: 462 caacattgctataattgatttagg 439

>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 271  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 330
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094

                 
Query: 331  ccaag 335
            |||||
Sbjct: 1093 ccaag 1089



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 6    caacgttgctataattgatttagg 29
            |||| |||||||||||||||||||
Sbjct: 1408 caacattgctataattgatttagg 1385

>gb|AC155284.7| Mus musculus 6 BAC RP23-241L3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205924

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 139   acgacaaaggggtaattggtttatt 163
             |||||||| ||||||||||||||||
Sbjct: 44415 acgacaaaagggtaattggtttatt 44391

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     taattgatttagggaagtgc 36
              ||||||||||||||||||||
Sbjct: 657464 taattgatttagggaagtgc 657445

>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence
          Length = 35325

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aaagtttctaataatacaat 127
             ||||||||||||||||||||
Sbjct: 20319 aaagtttctaataatacaat 20300

>gb|BC059333.1| Xenopus laevis hypothetical protein MGC69081, mRNA (cDNA clone
           MGC:69081 IMAGE:4968949), complete cds
          Length = 3895

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 127 tctttcaagggaacgacaaaggggtaattggt 158
           |||||||||||||||||| ||  |||||||||
Sbjct: 938 tctttcaagggaacgacacagatgtaattggt 907

>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part
              of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G)
              and a novel gene, complete sequence
          Length = 145136

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    aaagtttctaataatacaat 127
              ||||||||||||||||||||
Sbjct: 103537 aaagtttctaataatacaat 103518

>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18,
              complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    taaagtttctaataatacaa 126
              ||||||||||||||||||||
Sbjct: 107638 taaagtttctaataatacaa 107657

>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence
          Length = 195101

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   tatataaagtttctaataat 122
             ||||||||||||||||||||
Sbjct: 13115 tatataaagtttctaataat 13096

>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence
          Length = 193884

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    ttggccttcttgggcactgc 298
              ||||||||||||||||||||
Sbjct: 153079 ttggccttcttgggcactgc 153098

>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18,
              complete sequence
          Length = 176163

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    taaagtttctaataatacaa 126
              ||||||||||||||||||||
Sbjct: 165685 taaagtttctaataatacaa 165666

>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
              sequence
          Length = 231197

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    tatgagtatgctctggcaaa 238
              ||||||||||||||||||||
Sbjct: 208325 tatgagtatgctctggcaaa 208306

>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete
             sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   ttggccttcttgggcactgc 298
             ||||||||||||||||||||
Sbjct: 53068 ttggccttcttgggcactgc 53049


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,541,220
Number of Sequences: 3902068
Number of extensions: 2541220
Number of successful extensions: 44463
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44380
Number of HSP's gapped (non-prelim): 82
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)