Clone Name | rbart12f04 |
---|---|
Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 127 bits (320), Expect = 1e-29 Identities = 68/130 (52%), Positives = 78/130 (60%), Gaps = 7/130 (5%) Frame = -3 Query: 523 NAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGG 344 N Q FN +LKE VA+LR LP A F +VD+Y+ Y L SE +K GF PL CCGY G Sbjct: 251 NEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGY-G 309 Query: 343 GQYNFDKNIRCGDPVLEGK-------SCEDPSKSVSWDGVHLTEAAYKFIFDQIVDGALS 185 G+YNF CGD V SC PS V+WDG H TEAA ++ FDQI GA S Sbjct: 310 GKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFS 369 Query: 184 DPPVPLRGAC 155 DPPVPL AC Sbjct: 370 DPPVPLNMAC 379
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 106 bits (264), Expect = 4e-23 Identities = 56/113 (49%), Positives = 71/113 (62%), Gaps = 7/113 (6%) Frame = -3 Query: 511 QFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYN 332 Q FN LK+ V LR +L EAA TYVDVY+ ++L A+ GF L CCG+ GG+YN Sbjct: 253 QQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGH-GGKYN 311 Query: 331 FDKNIRC-------GDPVLEGKSCEDPSKSVSWDGVHLTEAAYKFIFDQIVDG 194 ++K I C G V GK C++P K+V WDGVH T+AA KFIFD+I G Sbjct: 312 YNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKIAPG 364
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 55.8 bits (133), Expect = 7e-08 Identities = 31/103 (30%), Positives = 47/103 (45%) Frame = -3 Query: 523 NAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGG 344 N Q FN++L + +L LP + F Y+D+Y +++ +GF + + CC G Sbjct: 424 NYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTG- 482 Query: 343 GQYNFDKNIRCGDPVLEGKSCEDPSKSVSWDGVHLTEAAYKFI 215 C K C + S + WDGVH T+ AYK I Sbjct: 483 ---LLSAGALCKKST--SKICPNTSSYLFWDGVHPTQRAYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 50.4 bits (119), Expect = 3e-06 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%) Frame = -3 Query: 523 NAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYG- 347 N Q FN++L + +L LP + Y D+Y+ K++ + +GF + + CC G Sbjct: 341 NYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGL 400 Query: 346 --GGQYNFDKNIRCGDPVLEGKSCEDPSKSVSWDGVHLTEAAYK 221 GG + ++ + K+ + S + WDG+H ++ AY+ Sbjct: 401 TKGGVFCKERTL---------KNMSNASSYLFWDGLHPSQRAYE 435
>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)| Length = 1150 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 123 NEHHAHCPLPWQAPR--KGTGGSERAPSTIWSKMNL*AASVKCTPSQLTLFDGSSQDFPS 296 NE+ CP P P G G E++P +W+ A KCT ++ D ++ PS Sbjct: 915 NENKTGCPAPLPPPPVCHGPLGEEKSPGDVWT-----ANCHKCTCTEAKTVDCKPKECPS 969
>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)| Length = 700 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 10/115 (8%) Frame = -3 Query: 511 QFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYN 332 Q N +L + V R +PE V S + G+ P CC G + + Sbjct: 573 QTHNGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTGKCCCSPGWEGD 632 Query: 331 FDKNIRCGDPVLEGKSCEDPSKSVSWDGV----------HLTEAAYKFIFDQIVD 197 F + +C G C P+K + G ++ I DQI+D Sbjct: 633 FCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVTRAGILDQIID 687
>RIP_RAT (Q4G2Y1) RPA-interacting protein| Length = 219 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +3 Query: 108 IQNLINEHHAHCPLPWQAPR-KGTGGSERAPSTIWS 212 ++ +NEH AHCP P TGG+E PS + S Sbjct: 176 LEGNVNEHSAHCP---HIPEFSVTGGTEEKPSLLMS 208
>TRSF_DROER (Q23935) Female-specific protein transformer| Length = 178 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 282 QDFPSRTGSPHRMFLSKLYWPPPYPQHTRRGSPKPNFLAS 401 QDF +G R +L PPP+P R +P FL + Sbjct: 126 QDFYGMSGMQQRFGYQRLPHPPPFPPAPYRFRQRPPFLGA 165
>EYA4_HUMAN (O95677) Eyes absent homolog 4 (EC 3.1.3.48)| Length = 639 Score = 28.9 bits (63), Expect = 9.0 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = +3 Query: 75 LEYGCLEK*SYIQNLINEHHAHCPLPWQAPRKGTGGSERAPS-TIWSKMNL*AASVKCTP 251 L+ GCL SY P +Q P GS APS TI++ ++ Sbjct: 215 LQSGCL---SYSPGFSTPQPGQTPYSYQMP-----GSSFAPSSTIYANNSV--------- 257 Query: 252 SQLTLFDGSSQDFPSRT 302 S T F GS QD+PS T Sbjct: 258 SNSTNFSGSQQDYPSYT 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,141,714 Number of Sequences: 219361 Number of extensions: 1682742 Number of successful extensions: 4513 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4344 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4504 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)