Clone Name | rbart12e12 |
---|---|
Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 52.0 bits (123), Expect = 7e-07 Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Frame = -2 Query: 449 KTXEERARAAGEVVSVLE----AXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLRASEAMC 282 KT EERA A + V+ LE A GW A + + Sbjct: 124 KTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLI 183 Query: 281 GVRTLDPARTPRLAAWAGRFGALDGVREIVPDAA 180 G R +DPARTP LAAW RF A D + +VPD A Sbjct: 184 GRRLIDPARTPALAAWEERFRATDAAKGVVPDDA 217
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 38.1 bits (87), Expect = 0.010 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 305 LRASEAMCGVRTLDPARTPRLAAWAGRFGALDGVREIVPDAAPLVEY 165 LRA E + G+ +D + TP L W+ RF A + ++PD +V++ Sbjct: 175 LRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221
>TLL_DROVI (O16845) Protein tailless| Length = 450 Score = 34.3 bits (77), Expect = 0.15 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +1 Query: 169 STSGAASGTISLTPSSAPNRPAHAASRGVLAGSRVRTPHMASDARN 306 ST A+ +I LT S +PN A A SRG+L S+V H +DARN Sbjct: 346 STEDLANSSI-LTGSGSPNSSASAESRGLLESSKVAAMH--NDARN 388
>TLL_DROME (P18102) Protein tailless| Length = 452 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = +1 Query: 169 STSGAASGTISLTPSSAPNRPAHAASRGVLAGSRVRTPHMASDARN 306 ST A+ +I LT S +PN A A SRG+L +V H +DAR+ Sbjct: 348 STEDLANSSI-LTGSGSPNSSASAESRGLLESGKVAAMH--NDARS 390
>GSTT2_HUMAN (P30712) Glutathione S-transferase theta-2 (EC 2.5.1.18) (GST| class-theta-2) Length = 243 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -2 Query: 251 PRLAAWAGRFGALDGVREIVPDAAPLVEYNLMKRARRGLPYLPPHQTQ 108 PRLAAW GR A G E+ +A ++ L + A++ LP P Q Sbjct: 187 PRLAAWRGRVEAFLGA-ELCQEAHSIILSILEQAAKKTLPTPSPEAYQ 233
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -2 Query: 296 SEAMCGVRTLDPARTPRLAAWAGRFGALDGVREIVPDAAPLVEYNLMKRARRGLP 132 S+ + RTL P +PRL GR G LD +RE+ P + +L +RA LP Sbjct: 431 SDGLAATRTLQPPESPRL----GRRG-LDSMRELPP-----LSPSLSRRALSPLP 475
>INHB_DROME (O61643) Inhibin beta chain precursor (Activin beta chain)| Length = 946 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +1 Query: 88 ELKLAIYCVWCGGRYGRPRRARFMRLYSTSGAASGTISLTPSSAPNRP 231 +L+L I C CGGRY + L+ TS G S S+ PNRP Sbjct: 777 KLRLLIDCTGCGGRYS-------LHLFQTS-KLRGNSSDYLSTNPNRP 816
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 276 HAAHGLGRAQPPDEPAEHHVHQPH 347 H H PP +P HH H PH Sbjct: 1007 HPPHHHHHHAPPPQPHHHHAHPPH 1030
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -2 Query: 251 PRLAAWAGRFGALDGVREIVPDAAPLVEY 165 PRLAAWA R G +D V + +P + ++ Sbjct: 192 PRLAAWARRCGRIDSVVKHLPSPEKVYDF 220
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 276 HAAHGLGRAQPPDEPAEHHVHQPH 347 H H PP +P HH H PH Sbjct: 999 HPPHHHHHHAPPPQPHHHHAHPPH 1022
>ENV_HV2CA (P24105) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 859 Score = 28.5 bits (62), Expect = 8.1 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +1 Query: 130 YGRPRRARF----MRLYSTSGAASGTISLTPSSAPNRPAHAASRGVLAG 264 +GRP+R F + +T+G A GT SLT S A SR +LAG Sbjct: 507 HGRPKRGAFVLGFLGFLTTAGVAMGTASLTLS--------AQSRTLLAG 547 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,880,978 Number of Sequences: 219361 Number of extensions: 610224 Number of successful extensions: 2482 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2414 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2482 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)