ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465282.1| Oryza sativa (japonica cultivar-group), mRNA 424 e-115
2dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
3dbj|AK059237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
4dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mR... 424 e-115
5gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase... 331 1e-87
6gb|AY104317.1| Zea mays PCO132144 mRNA sequence 317 2e-83
7gb|BT016898.1| Zea mays clone Contig731 mRNA sequence 315 7e-83
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
9dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
10gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence 163 7e-37
11emb|AJ006095.1|CAR6095 Cicer arietinum mRNA for putative 26S pro... 155 2e-34
12gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds 155 2e-34
13gb|AY112326.1| Zea mays CL40761_1 mRNA sequence 94 5e-16
14ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RP... 90 8e-15
15gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds 90 8e-15
16gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, c... 90 8e-15
17gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-A... 90 8e-15
18dbj|AK174288.1| Ciona intestinalis cDNA, clone:cicl025a20, full ... 88 3e-14
19dbj|AK117042.1| Ciona intestinalis cDNA, clone:cits021e02, full ... 80 8e-12
20emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
21emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
22emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
23ref|XM_662535.1| Cryptosporidium hominis TU502 26S proteasome AA... 68 3e-08
24ref|XM_625842.1| Cryptosporidium parvum Iowa II 26S proteasome r... 68 3e-08
25dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
26gb|AY431597.1| Aedes aegypti ASAP ID: 36999 proteasome regulator... 50 0.007
27gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete ... 50 0.007
28ref|XM_643629.1| Entamoeba histolytica HM-1:IMSS 26s proteasome ... 46 0.11
29gb|AY609898.1| Sus scrofa clone Clu_40992.scr.msk.p1.Contig1, mR... 46 0.11
30emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephal... 46 0.11
31gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 0.42
32ref|NM_211296.1| Eremothecium gossypii AFR394Wp (AFR394W), mRNA 44 0.42
33emb|BX067091.1|CNS09NXJ Single read from an extremity of a full-... 42 1.7
34emb|BX064829.1|CNS09M6P Single read from an extremity of a full-... 42 1.7
35emb|BX064588.1|CNS09M00 Single read from an extremity of a full-... 42 1.7
36emb|BX057192.1|CNS09GAK Single read from an extremity of a full-... 42 1.7
37emb|BX048935.1|CNS099X7 Single read from an extremity of a full-... 42 1.7
38emb|BX047011.1|CNS098FR Single read from an extremity of a full-... 42 1.7
39emb|BX031109.1|CNS08W61 Single read from an extremity of a full-... 42 1.7
40emb|BX030223.1|CNS08VHF Single read from an extremity of a full-... 42 1.7
41emb|Z38135.1|MSDBATPMR M.sexta mRNA for DEAD-box ATPase 42 1.7
42emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in ... 42 1.7
43gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosom... 42 1.7
44gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, comp... 42 1.7
45ref|XM_679369.1| PREDICTED: Danio rerio similar to B4galt3-prov ... 42 1.7
46gb|AC154832.2| Mus musculus BAC clone RP24-568D4 from chromosome... 42 1.7
47ref|XM_311871.2| Anopheles gambiae str. PEST ENSANGP00000023984 ... 42 1.7
48ref|XM_311870.2| Anopheles gambiae str. PEST ENSANGP00000017654 ... 42 1.7
49gb|AC174644.2| Mus musculus BAC clone RP23-432C18 from chromosom... 42 1.7
50gb|AY609476.1| Sus scrofa clone Clu_12870.scr.msk.p1.Contig3, mR... 42 1.7
51emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, ... 42 1.7
52gb|AC158981.2| Mus musculus BAC clone RP23-230C10 from chromosom... 42 1.7
53ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE... 40 6.6
54ref|NM_103934.3| Arabidopsis thaliana unknown protein AT1G50510 ... 40 6.6
55gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BA... 40 6.6
56ref|XM_777098.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.6
57ref|XM_789501.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.6
58emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph... 40 6.6
59gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosom... 40 6.6
60gb|AC091991.2| Homo sapiens chromosome 5 clone RP11-86C20, compl... 40 6.6
61gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, com... 40 6.6
62gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Can... 40 6.6
63gb|AY065076.1| Arabidopsis thaliana putative transitional endopl... 40 6.6
64dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitio... 40 6.6
65gb|AC010244.6| Homo sapiens chromosome 5 clone CTC-364B20, compl... 40 6.6
66emb|BX814123.1|CNS0AEBL Arabidopsis thaliana Full-length cDNA Co... 40 6.6
67emb|BX814920.1|CNS0AE2A Arabidopsis thaliana Full-length cDNA Co... 40 6.6
68emb|BX841857.1|CNS09Y38 Arabidopsis thaliana Full-length cDNA Co... 40 6.6
69gb|AC096765.3| Homo sapiens BAC clone RP11-678F16 from 2, comple... 40 6.6
70gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17... 40 6.6
71gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell ... 40 6.6
72gb|BT004358.1| Arabidopsis thaliana clone U20176 unknown protein... 40 6.6
73gb|BT002789.1| Arabidopsis thaliana clone RAFL15-04-J16 (R20176)... 40 6.6
74gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11... 40 6.6
75emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chro... 40 6.6
76emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in... 40 6.6
77gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle pr... 40 6.6 
>ref|XM_465282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1517

 Score =  424 bits (214), Expect = e-115
 Identities = 277/298 (92%)
 Strand = Plus / Minus

                                                                        
Query: 185  tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
            |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1315 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1256

                                                                        
Query: 245  ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1255 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 1196

                                                                        
Query: 305  cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 364
            |||| || || |||||||  |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 1195 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 1136

                                                                        
Query: 365  cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 424
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1135 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 1076

                                                                      
Query: 425  tcttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacg 482
            |||||||||  ||||| || ||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 1075 tcttctgccgacgatctggaagagggaactcgattttcctgtccaatctacctggacg 1018
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>dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H23, full
            insert sequence
          Length = 1518

 Score =  424 bits (214), Expect = e-115
 Identities = 277/298 (92%)
 Strand = Plus / Minus

                                                                        
Query: 185  tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
            |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1315 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1256

                                                                        
Query: 245  ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1255 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 1196

                                                                        
Query: 305  cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 364
            |||| || || |||||||  |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 1195 cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 1136

                                                                        
Query: 365  cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 424
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1135 cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 1076

                                                                      
Query: 425  tcttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacg 482
            |||||||||  ||||| || ||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 1075 tcttctgccgacgatctggaagagggaactcgattttcctgtccaatctacctggacg 1018
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>dbj|AK059237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F02, full
            insert sequence
          Length = 1293

 Score =  424 bits (214), Expect = e-115
 Identities = 277/298 (92%)
 Strand = Plus / Minus

                                                                        
Query: 185  tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
            |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1066 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1007

                                                                        
Query: 245  ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1006 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 947

                                                                        
Query: 305  cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 364
            |||| || || |||||||  |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 946  cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 887

                                                                        
Query: 365  cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 424
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 886  cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 827

                                                                      
Query: 425  tcttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacg 482
            |||||||||  ||||| || ||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 826  tcttctgccgacgatctggaagagggaactcgattttcctgtccaatctacctggacg 769
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>dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mRNA for 26S proteasome
            regulatory particle triple-A ATPase subunit3, partial cds
          Length = 1375

 Score =  424 bits (214), Expect = e-115
 Identities = 277/298 (92%)
 Strand = Plus / Minus

                                                                        
Query: 185  tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
            |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 1114 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 1055

                                                                        
Query: 245  ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1054 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 995

                                                                        
Query: 305  cttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataat 364
            |||| || || |||||||  |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 994  cttcttgacagatagcagcaatatcagcagcactaattttatctggtctggaaacataat 935

                                                                        
Query: 365  cttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcc 424
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 934  cttccaaatcaacctcatcactcaagttcattttagcagtacagacttggaaaacaagcc 875

                                                                      
Query: 425  tcttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacg 482
            |||||||||  ||||| || ||||||||||| ||||||||||||| ||| ||||||||
Sbjct: 874  tcttctgccgacgatctggaagagggaactcgattttcctgtccaatctacctggacg 817
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>gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase RPT3 mRNA, complete
            cds
          Length = 1251

 Score =  331 bits (167), Expect = 1e-87
 Identities = 266/299 (88%)
 Strand = Plus / Minus

                                                                        
Query: 186  gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 245
            |||| ||||||||||||| |||||||||| ||| |||||||| || ||||||||||| ||
Sbjct: 1068 gttgactcatttgtagaaatcaaagtctgtctcgggcttcttcacgttggttcggtagcc 1009

                                                                        
Query: 246  cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 305
            ||| || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 1008 cttttcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 949

                                                                        
Query: 306  ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 365
             || ||||| |||||||  ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 948  ctcttggcagatagcagcaatatcagcagcactgatcttatccggtctggaaacataatc 889

                                                                        
Query: 366  ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 425
            |||||||||||||||||| |||| |||||| || ||||| |||||||| |||||||||||
Sbjct: 888  ttccaaatcaacctcatcgctcaggttcattttggcagtgcaaacttgaaaaacaagcct 829

                                                                       
Query: 426  cttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacgca 484
            |||||| | ||| || |||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 828  cttctgacgccggtctggcagagggaactcaattttcctgtcaagtctaccaggacgca 770
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>gb|AY104317.1| Zea mays PCO132144 mRNA sequence
          Length = 1654

 Score =  317 bits (160), Expect = 2e-83
 Identities = 266/300 (88%), Gaps = 1/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 186  gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 245
            |||| ||||||||||||| |||||||||| ||| |||||||| || ||||||||||| ||
Sbjct: 1379 gttgactcatttgtagaaatcaaagtctgtctcgggcttcttcacgttggttcggtagcc 1320

                                                                        
Query: 246  cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 305
            ||| || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 1319 cttttcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 1260

                                                                        
Query: 306  ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 365
             || ||||| |||||||  ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1259 ctcttggcagatagcagcaatatcagcagcactgatcttatccggtctggaaacataatc 1200

                                                                        
Query: 366  ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 425
            |||||||||||||||||| |||| |||||| || ||||| |||||||| |||||||||||
Sbjct: 1199 ttccaaatcaacctcatcgctcaggttcattttggcagtgcaaacttgaaaaacaagcct 1140

                                                                        
Query: 426  cttctgcctccgatccgg-cagagggaactcaattttcctgtccagtcttcctggacgca 484
            |||||| | ||| || || |||||||||||||||||||||||| ||||| || |||||||
Sbjct: 1139 cttctgacgccggtctggccagagggaactcaattttcctgtcaagtctaccaggacgca 1080
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>gb|BT016898.1| Zea mays clone Contig731 mRNA sequence
          Length = 1066

 Score =  315 bits (159), Expect = 7e-83
 Identities = 264/299 (88%)
 Strand = Plus / Minus

                                                                       
Query: 186 gttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacc 245
           |||||||||||||||||| || ||||| | ||||||||| || || ||||||||||| ||
Sbjct: 397 gttgcctcatttgtagaaatcgaagtccgtctcaggctttttcacgttggttcggtagcc 338

                                                                       
Query: 246 cttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccagc 305
           |||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 337 cttctcaaagtccttggggaggatgacatatcggtttttgcggacagcatgcatgccagc 278

                                                                       
Query: 306 ttcctggcaaatagcagtgatatcagcagcactgattttatcaggtctggagacataatc 365
           ||| || || |||||||  ||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct: 277 ttcttgacagatagcagcaatatcagcagcactgatcttatccggtctggaaacatagtc 218

                                                                       
Query: 366 ttccaaatcaacctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcct 425
           ||||||||||||||| ||||||| |||||| || ||||| || |||||||||||||||||
Sbjct: 217 ttccaaatcaacctcgtcactcaggttcattttggcagtgcagacttggaaaacaagcct 158

                                                                      
Query: 426 cttctgcctccgatccggcagagggaactcaattttcctgtccagtcttcctggacgca 484
           |||||| | ||| || |||| ||||||||||||||||||||| ||||| || |||||||
Sbjct: 157 cttctgacgccggtctggcaaagggaactcaattttcctgtcaagtctaccaggacgca 99
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  218 bits (110), Expect = 1e-53
 Identities = 131/138 (94%)
 Strand = Plus / Minus

                                                                            
Query: 185      tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
                |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 13062628 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 13062569

                                                                            
Query: 245      ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 13062568 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 13062509

                                  
Query: 305      cttcctggcaaatagcag 322
                |||| || || |||||||
Sbjct: 13062508 cttcttgacagatagcag 13062491



 Score =  133 bits (67), Expect = 6e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                            
Query: 327      atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 386
                |||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 13061702 atcagcagcactaattttatctggtctggaaacataatcttccaaatcaacctcatcact 13061643

                                               
Query: 387      caagttcatcttagcagtacaaacttggaaa 417
                ||||||||| ||||||||||| || ||||||
Sbjct: 13061642 caagttcattttagcagtacagacctggaaa 13061612



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                            
Query: 409      acttggaaaacaagcctcttctgcctccgatccggcagagggaactcaattttcctgtcc 468
                |||||||||||||||||||||||||  ||||| || ||||||||||| ||||||||||||
Sbjct: 13060637 acttggaaaacaagcctcttctgccgacgatctggaagagggaactcgattttcctgtcc 13060578

                              
Query: 469      agtcttcctggacg 482
                | ||| ||||||||
Sbjct: 13060577 aatctacctggacg 13060564
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>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476C12
          Length = 157570

 Score =  218 bits (110), Expect = 1e-53
 Identities = 131/138 (94%)
 Strand = Plus / Minus

                                                                         
Query: 185   tgttgcctcatttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaac 244
             |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 39205 tgttgcctcatttgtagaagtcaaagtcagtctcaggcttcttgacattggttcggtaac 39146

                                                                         
Query: 245   ccttctcgaagtccttggggaggataacataccgatttttgcggacagcatgcatgccag 304
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 39145 ccttctcgaagtccttggggaggataacataccgatttttgcgcacagcatgcataccag 39086

                               
Query: 305   cttcctggcaaatagcag 322
             |||| || || |||||||
Sbjct: 39085 cttcttgacagatagcag 39068



 Score =  133 bits (67), Expect = 6e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                         
Query: 327   atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 386
             |||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 38279 atcagcagcactaattttatctggtctggaaacataatcttccaaatcaacctcatcact 38220

                                            
Query: 387   caagttcatcttagcagtacaaacttggaaa 417
             ||||||||| ||||||||||| || ||||||
Sbjct: 38219 caagttcattttagcagtacagacctggaaa 38189



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                         
Query: 409   acttggaaaacaagcctcttctgcctccgatccggcagagggaactcaattttcctgtcc 468
             |||||||||||||||||||||||||  ||||| || ||||||||||| ||||||||||||
Sbjct: 37214 acttggaaaacaagcctcttctgccgacgatctggaagagggaactcgattttcctgtcc 37155

                           
Query: 469   agtcttcctggacg 482
             | ||| ||||||||
Sbjct: 37154 aatctacctggacg 37141
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>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence
          Length = 1608

 Score =  163 bits (82), Expect = 7e-37
 Identities = 220/266 (82%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| |||||||| | ||||||||| || |||||||||||||| || ||||| |||
Sbjct: 1269 ggcttcttcacattggtcctgtaacccttttcaaagtccttggggagtatgacatatcga 1210

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| || |||||||| || ||||| |  || ||||||||||| 
Sbjct: 1209 ttctttcgcactgcatgcatacctgcttcctgacatatagctgcaatctcagcagcacta 1150

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||||||||| |  || |||||||||||||| |||||||| ||||  ||||||||||||
Sbjct: 1149 attttatcagggcgagaaacataatcttccaagtcaacctcgtcacctaagttcatctta 1090

                                                                        
Query: 400  gcagtacaaacttggaaaacaagcctcttctgcctccgatccggcagagggaactcaatt 459
            |||||||| || || |||||||||||||| || | || ||| |||| ||| || ||||| 
Sbjct: 1089 gcagtacagacctgaaaaacaagcctcttttgacgcctatcaggcaaaggaaattcaatc 1030

                                      
Query: 460  ttcctgtccagtcttcctggacgcag 485
            ||||  || || ||||| ||||||||
Sbjct: 1029 ttccgatcaagccttccaggacgcag 1004
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>emb|AJ006095.1|CAR6095 Cicer arietinum mRNA for putative 26S protease regulatory subunit
           6, partial
          Length = 763

 Score =  155 bits (78), Expect = 2e-34
 Identities = 219/266 (82%)
 Strand = Plus / Minus

                                                                       
Query: 196 ttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacccttctcgaag 255
           ||||| || |||||||| |  ||||||||||| ||||| || | ||||||||||||||||
Sbjct: 531 ttgtaaaattcaaagtccgtatcaggcttcttcacatttgtcctgtaacccttctcgaag 472

                                                                       
Query: 256 tccttggggaggataacataccgatttttgcggacagcatgcatgccagcttcctggcaa 315
           ||||| || || || ||||| | ||| || || ||||||||||| || ||||| || |||
Sbjct: 471 tccttcggcagtatgacatatctattcttacgaacagcatgcattcctgcttcttgacaa 412

                                                                       
Query: 316 atagcagtgatatcagcagcactgattttatcaggtctggagacataatcttccaaatca 375
           |||||||  || ||||||||||| ||||| ||||| | ||| |||||||| ||||  || 
Sbjct: 411 atagcagatatctcagcagcactaattttgtcaggacgggaaacataatcctccaggtcc 352

                                                                       
Query: 376 acctcatcactcaagttcatcttagcagtacaaacttggaaaacaagcctcttctgcctc 435
           |||||||||||||||||||| || || || ||||| || || ||||||||||| ||||  
Sbjct: 351 acctcatcactcaagttcattttggctgtgcaaacctgaaatacaagcctcttttgccgt 292

                                     
Query: 436 cgatccggcagagggaactcaatttt 461
           | ||| |||| |||||||||||||||
Sbjct: 291 ctatcaggcaaagggaactcaatttt 266
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>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds
          Length = 1473

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                        
Query: 196  ttgtagaagtcaaagtctgactcaggcttcttgacattggttcggtaacccttctcgaag 255
            |||||||| |||||||| |  ||||||||||| || || || | ||||||||| || |||
Sbjct: 1260 ttgtagaattcaaagtcagtgtcaggcttcttcacgtttgtcctgtaacccttttcaaag 1201

                                                                        
Query: 256  tccttggggaggataacataccgatttttgcggacagcatgcatgccagcttcctggcaa 315
            ||||| || ||||| ||||| ||||| ||||| || |||||||| |||||||| || || 
Sbjct: 1200 tcctttggaaggatgacatatcgattcttgcgcactgcatgcataccagcttcttgacag 1141

                                                                        
Query: 316  atagcagtgatatcagcagcactgattttatcaggtctggagacataatcttccaaatca 375
            ||||| || || ||||||||||||||||||||||| |  || |||||||||||||| |||
Sbjct: 1140 atagccgtaatctcagcagcactgattttatcagggcgagaaacataatcttccaagtca 1081

                                      
Query: 376  acctcatcactcaagttcatcttagc 401
            ||||||||||  ||||||||||||||
Sbjct: 1080 acctcatcacctaagttcatcttagc 1055
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>gb|AY112326.1| Zea mays CL40761_1 mRNA sequence
          Length = 1098

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 327 atcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcact 386
           ||||| ||||||||| ||||| |||||| | |||||||||||||||||| ||||||||||
Sbjct: 575 atcagtagcactgatcttatccggtctgcaaacataatcttccaaatcagcctcatcact 634

                              
Query: 387 caagttcatcttagcagta 405
           ||| | |||||||||||||
Sbjct: 635 caaatccatcttagcagta 653
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>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RPT3) mRNA, complete cds
          Length = 1518

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 168/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1276 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1217

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1216 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1157

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||||||||| |  || ||||| |||||||| ||||||||||| || | |||||| || 
Sbjct: 1156 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1097

                                         
Query: 400  gcagtacaaacttggaaaacaagcctctt 428
            |  || || || |||||||||||||||||
Sbjct: 1096 gaggtgcatacctggaaaacaagcctctt 1068
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>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds
          Length = 1227

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 168/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1199 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1140

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1139 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1080

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||||||||| |  || ||||| |||||||| ||||||||||| || | |||||| || 
Sbjct: 1079 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1020

                                         
Query: 400  gcagtacaaacttggaaaacaagcctctt 428
            |  || || || |||||||||||||||||
Sbjct: 1019 gaggtgcatacctggaaaacaagcctctt 991
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>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds
          Length = 1950

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 168/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1715 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1656

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1655 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1596

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||||||||| |  || ||||| |||||||| ||||||||||| || | |||||| || 
Sbjct: 1595 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1536

                                         
Query: 400  gcagtacaaacttggaaaacaagcctctt 428
            |  || || || |||||||||||||||||
Sbjct: 1535 gaggtgcatacctggaaaacaagcctctt 1507
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>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3)
            mRNA, complete cds
          Length = 1301

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 168/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1240 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1181

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1180 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1121

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||||||||| |  || ||||| |||||||| ||||||||||| || | |||||| || 
Sbjct: 1120 attttatcaggccgtgaaacatagtcttccaagtcaacctcatcgctaaggttcattttg 1061

                                         
Query: 400  gcagtacaaacttggaaaacaagcctctt 428
            |  || || || |||||||||||||||||
Sbjct: 1060 gaggtgcatacctggaaaacaagcctctt 1032
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>dbj|AK174288.1| Ciona intestinalis cDNA, clone:cicl025a20, full insert sequence
          Length = 1481

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 271  acataccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatca 330
            |||||||| ||||  || || ||| ||||||| ||||| |||||||| ||| | ||||||
Sbjct: 1226 acataccggttttcacgaactgcaagcatgcctgcttcttggcaaattgcatttatatca 1167

                                                                        
Query: 331  gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 390
            ||| || ||||||| ||||||||||  ||||||||||||||||| || ||||| || | |
Sbjct: 1166 gcaccagtgattttgtcaggtctggcaacataatcttccaaatccacttcatcgctgagg 1107

                    
Query: 391  ttcatctt 398
            ||||||||
Sbjct: 1106 ttcatctt 1099
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>dbj|AK117042.1| Ciona intestinalis cDNA, clone:cits021e02, full insert sequence
          Length = 1474

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 271  acataccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatca 330
            |||||||| ||||  || || ||| ||||||| ||||| |||||||| ||| | ||||||
Sbjct: 1219 acataccggttttcacgaactgcaagcatgcctgcttcttggcaaattgcatttatatca 1160

                                                                        
Query: 331  gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 390
            ||| || ||||||| ||||||| ||  ||||||||||||||||| || ||||| || | |
Sbjct: 1159 gcaccagtgattttgtcaggtcgggcaacataatcttccaaatccacttcatcgctgagg 1100

                    
Query: 391  ttcatctt 398
            ||||||||
Sbjct: 1099 ttcatctt 1092
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>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS60ZH10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 168/210 (80%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1250 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1191

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1190 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1131

                                                                        
Query: 340  attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 398
            ||||||||||| |  || || ||| |||||||| ||||||||||| || | |||||| ||
Sbjct: 1130 attttatcaggccgtgaaacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1071

                                          
Query: 399  agcagtacaaacttggaaaacaagcctctt 428
             |  || || || |||||||||||||||||
Sbjct: 1070 ggaggtgcatacctggaaaacaagcctctt 1041
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>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS60ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1414

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 168/210 (80%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1230 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1171

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1170 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1111

                                                                        
Query: 340  attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 398
            ||||||||||| |  || || ||| |||||||| ||||||||||| || | |||||| ||
Sbjct: 1110 attttatcaggccgtgaaacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1051

                                          
Query: 399  agcagtacaaacttggaaaacaagcctctt 428
             |  || || || |||||||||||||||||
Sbjct: 1050 ggaggtgcatacctggaaaacaagcctctt 1021
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>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS90ZD08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1389

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 168/210 (80%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 1305 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 1246

                                                                        
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactg 339
            || || || || |||||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 1245 ttctttcgcaccgcatgcataccagcttcctggcaaattgctgctatctcagcagcgcta 1186

                                                                        
Query: 340  attttatcaggtctggagac-ataatcttccaaatcaacctcatcactcaagttcatctt 398
            ||||||||||| |  ||||| ||| |||||||| ||||||||||| || | |||||| ||
Sbjct: 1185 attttatcaggccgtgagacgatagtcttccaagtcaacctcatcgctaaggttcatttt 1126

                                          
Query: 399  agcagtacaaacttggaaaacaagcctctt 428
             |  || || || |||||||| ||||||||
Sbjct: 1125 ggaggtgcatacctggaaaacgagcctctt 1096
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>ref|XM_662535.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit RPT3
            (Chro.40284) partial mRNA
          Length = 1206

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||| || |||||||||||||| ||||| | |||||| || ||||||||||||||||| 
Sbjct: 1055 attttttctggtctggagacatattcttcaagatcaacttcttcactcaagttcatcttt 996

                  
Query: 400  gcagta 405
            ||||||
Sbjct: 995  gcagta 990
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>ref|XM_625842.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit 26b
            like AAA ATpase (cgd4_2540), partial mRNA
          Length = 1206

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 340  attttatcaggtctggagacataatcttccaaatcaacctcatcactcaagttcatctta 399
            ||||| || |||||||||||||| ||||| | |||||| || ||||||||||||||||| 
Sbjct: 1055 attttttctggtctggagacatattcttcaagatcaacttcttcactcaagttcatcttt 996

                  
Query: 400  gcagta 405
            ||||||
Sbjct: 995  gcagta 990
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>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7
          Length = 87090

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                         
Query: 220   ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
             |||||||| ||||| |  ||||| ||||||||||| ||||| || || || ||||| |  
Sbjct: 44216 ggcttcttaacatttgcgcggtagcccttctcgaaatccttaggtagtatcacatatctg 44157

                                                   
Query: 280   tttttgcggacagcatgcatgccagcttcctggcaaat 317
             || || || || |||||||| |||||||||||||||||
Sbjct: 44156 ttctttcgcaccgcatgcataccagcttcctggcaaat 44119



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 328   tcagcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatc 383
             |||||||| || ||||||||||| |  || ||||| |||||||| |||||||||||
Sbjct: 43785 tcagcagcgctaattttatcaggccgtgaaacatagtcttccaagtcaacctcatc 43730
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>gb|AY431597.1| Aedes aegypti ASAP ID: 36999 proteasome regulatory particle subunit
            mRNA sequence
          Length = 1252

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 274  taccgatttttgcggacagcatgcatgccagcttcctggcaaatagcagtgat 326
            |||| ||||| ||| ||||| ||||||||||||||||| ||||| ||| ||||
Sbjct: 1181 tacctattttcgcgcacagcgtgcatgccagcttcctgacaaattgcattgat 1129
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>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence
          Length = 128621

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 331  gcagcactgattttatcaggtctggagacataatcttccaaatcaacctcatcactcaag 390
            |||||||| ||||| ||||| | ||| |||||||||||||  || || ||||||||||| 
Sbjct: 6321 gcagcactaattttgtcagggcgggaaacataatcttccaggtccacttcatcactcaaa 6380

                 
Query: 391  ttcat 395
            |||||
Sbjct: 6381 ttcat 6385



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 83/103 (80%)
 Strand = Plus / Plus

                                                                        
Query: 220  ggcttcttgacattggttcggtaacccttctcgaagtccttggggaggataacataccga 279
            |||||||| || ||||| |  ||||| ||||| |||||||| || || || ||||| | |
Sbjct: 5605 ggcttcttcacgttggtcctataacctttctcaaagtcctttggtagtatgacatatcta 5664

                                                       
Query: 280  tttttgcggacagcatgcatgccagcttcctggcaaatagcag 322
            || || || ||||||||||| || ||||| || ||||||||||
Sbjct: 5665 ttcttacgaacagcatgcattcctgcttcttgacaaatagcag 5707
to top
>ref|XM_643629.1| Entamoeba histolytica HM-1:IMSS 26s proteasome subunit P45 family
            protein (402.t00003) partial mRNA
          Length = 1170

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 292  gcatgcatgccagcttcctggcaaatagcagtgatatcagcagcactgattttatcagg 350
            |||||||| |||||||| || ||||||| ||  || || ||| ||||||||||||||||
Sbjct: 1070 gcatgcataccagcttcttgacaaatagaagctatttctgcaccactgattttatcagg 1012
to top
>gb|AY609898.1| Sus scrofa clone Clu_40992.scr.msk.p1.Contig1, mRNA sequence
          Length = 1412

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 358  acataatcttccaaatcaacctc 380
            |||||||||||||||||||||||
Sbjct: 1131 acataatcttccaaatcaacctc 1109
to top
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 442    ggcagagggaactcaattttcctgtccagtcttcc 476
              ||||||||||||||||| |||||||| || |||||
Sbjct: 201203 ggcagagggaactcaatcttcctgtcgagccttcc 201237
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 448     gggaactcaattttcctgtccagtct 473
               |||||||||||||||||||| |||||
Sbjct: 1145024 gggaactcaattttcctgtcaagtct 1144999
to top
>ref|NM_211296.1| Eremothecium gossypii AFR394Wp (AFR394W), mRNA
          Length = 1419

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 448  gggaactcaattttcctgtccagtct 473
            |||||||||||||||||||| |||||
Sbjct: 1139 gggaactcaattttcctgtcaagtct 1114
to top
>emb|BX067091.1|CNS09NXJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC50CE06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 165 gtaacccttctcgaagtcctt 185
to top
>emb|BX064829.1|CNS09M6P Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC48BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 655

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 173 gtaacccttctcgaagtcctt 193
to top
>emb|BX064588.1|CNS09M00 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC46DG01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 522

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 174 gtaacccttctcgaagtcctt 194
to top
>emb|BX057192.1|CNS09GAK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC37AB06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 178 gtaacccttctcgaagtcctt 198
to top
>emb|BX048935.1|CNS099X7 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC24BG11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 153

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 117 gtaacccttctcgaagtcctt 137
to top
>emb|BX047011.1|CNS098FR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20DH12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 127

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 92  gtaacccttctcgaagtcctt 112
to top
>emb|BX031109.1|CNS08W61 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46BG01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 794

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 178 gtaacccttctcgaagtcctt 198
to top
>emb|BX030223.1|CNS08VHF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA45AE10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 138

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gtaacccttctcgaagtcctt 260
           |||||||||||||||||||||
Sbjct: 114 gtaacccttctcgaagtcctt 134
to top
>emb|Z38135.1|MSDBATPMR M.sexta mRNA for DEAD-box ATPase
          Length = 1341

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 445  agagggaactcaattttcctgtcca 469
            |||||||||||||||||||| ||||
Sbjct: 1027 agagggaactcaattttcctatcca 1003
to top
>emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in linkage group 16,
             complete sequence
          Length = 162349

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 448   gggaactcaattttcctgtccagtcttcctggacgcagcag 488
             ||||||||||| || | ||||| ||| ||||||||||||||
Sbjct: 58291 gggaactcaatcttacggtccaatctacctggacgcagcag 58331
to top
>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete
            sequence
          Length = 196765

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 33   acagacaagtagcttaacaaggatg 57
            |||||||| ||||||||||||||||
Sbjct: 6261 acagacaattagcttaacaaggatg 6285
to top
>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence
          Length = 187924

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 375    aacctcatcactcaagttcat 395
              |||||||||||||||||||||
Sbjct: 159050 aacctcatcactcaagttcat 159070
to top
>ref|XM_679369.1| PREDICTED: Danio rerio similar to B4galt3-prov protein (LOC556544),
            mRNA
          Length = 4364

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 448  gggaactcaattttcctgtccagtcttcctggacgcagcag 488
            ||||||||||| || | ||||| ||| ||||||||||||||
Sbjct: 1190 gggaactcaatcttacggtccaatctacctggacgcagcag 1150
to top
>gb|AC154832.2| Mus musculus BAC clone RP24-568D4 from chromosome 14, complete sequence
          Length = 134900

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   gtagaaaataaagcatcctct 176
             |||||||||||||||||||||
Sbjct: 99844 gtagaaaataaagcatcctct 99864
to top
>ref|XM_311871.2| Anopheles gambiae str. PEST ENSANGP00000023984 (ENSANGG00000015165),
            partial mRNA
          Length = 1374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 240  gtaacccttctcgaagtcctt 260
            |||||||||||||||||||||
Sbjct: 1197 gtaacccttctcgaagtcctt 1177
to top
>ref|XM_311870.2| Anopheles gambiae str. PEST ENSANGP00000017654 (ENSANGG00000015165),
            partial mRNA
          Length = 1449

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 240  gtaacccttctcgaagtcctt 260
            |||||||||||||||||||||
Sbjct: 1272 gtaacccttctcgaagtcctt 1252
to top
>gb|AC174644.2| Mus musculus BAC clone RP23-432C18 from chromosome 9, complete sequence
          Length = 199707

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 33    acagacaagtagcttaacaaggatg 57
             |||||||| ||||||||||||||||
Sbjct: 58112 acagacaattagcttaacaaggatg 58136
to top
>gb|AY609476.1| Sus scrofa clone Clu_12870.scr.msk.p1.Contig3, mRNA sequence
          Length = 1571

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 451  aactcaattttcctgtccagtcttcctgg 479
            |||||||| |||||||||||||| |||||
Sbjct: 1099 aactcaatcttcctgtccagtctccctgg 1071
to top
>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence
          Length = 136892

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 448    gggaactcaattttcctgtccagtcttcctggacgcagcag 488
              ||||||||||| || | ||||| ||| ||||||||||||||
Sbjct: 105952 gggaactcaatcttacggtccaatctacctggacgcagcag 105912
to top
>gb|AC158981.2| Mus musculus BAC clone RP23-230C10 from chromosome 14, complete
             sequence
          Length = 213277

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     agagaaactttaggaagaaggaatt 30
             |||| ||||||||||||||||||||
Sbjct: 21303 agagcaactttaggaagaaggaatt 21327
to top
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding /
            ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide
            binding AT3G09840 (CDC48) mRNA, complete cds
          Length = 2797

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 309  ctggcaaatagcagtgatatcagcagcactga 340
            |||||||||  |||||||||||||| ||||||
Sbjct: 2242 ctggcaaatctcagtgatatcagcaccactga 2211
to top
>ref|NM_103934.3| Arabidopsis thaliana unknown protein AT1G50510 mRNA, complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 630 aatagcagtgatatcagcag 649
to top
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence,
             complete sequence
          Length = 72902

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 309   ctggcaaatagcagtgatatcagcagcactga 340
             |||||||||  |||||||||||||| ||||||
Sbjct: 44321 ctggcaaatctcagtgatatcagcaccactga 44352
to top
>ref|XM_777098.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease
           regulatory subunit 6A (TAT-binding protein 1) (TBP-1)
           (Spermatogenic cell/sperm-associated TAT-binding protein
           homolog SATA) (LOC576830), mRNA
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 447 agggaactcaattttcctgtccagtcttcctg 478
           |||||| ||||| ||||||||||| |||||||
Sbjct: 789 agggaattcaatcttcctgtccagccttcctg 758
to top
>ref|XM_789501.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease
           regulatory subunit 7 (MSS1 protein) (LOC589870), mRNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 ttcctgtccagtcttcctgg 479
           ||||||||||||||||||||
Sbjct: 956 ttcctgtccagtcttcctgg 937
to top
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   ctgtccagtcttcctggacg 482
             ||||||||||||||||||||
Sbjct: 25103 ctgtccagtcttcctggacg 25122
to top
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence
          Length = 205094

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    atgcatgccagcttcctggc 313
              ||||||||||||||||||||
Sbjct: 100096 atgcatgccagcttcctggc 100077
to top
>gb|AC091991.2| Homo sapiens chromosome 5 clone RP11-86C20, complete sequence
          Length = 170219

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    ttgttgcctcatttgtagaagtca 207
              ||||| ||||||||||||||||||
Sbjct: 129683 ttgtttcctcatttgtagaagtca 129660
to top
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds
          Length = 2628

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 309  ctggcaaatagcagtgatatcagcagcactga 340
            |||||||||  |||||||||||||| ||||||
Sbjct: 2198 ctggcaaatctcagtgatatcagcaccactga 2167
to top
>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 170004

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   gcagagggaactcaattttc 462
             ||||||||||||||||||||
Sbjct: 25479 gcagagggaactcaattttc 25460
to top
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum
            ATPase (F8A24.11) mRNA, complete cds
          Length = 2730

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 309  ctggcaaatagcagtgatatcagcagcactga 340
            |||||||||  |||||||||||||| ||||||
Sbjct: 2232 ctggcaaatctcagtgatatcagcaccactga 2201
to top
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic
           reticulum ATPase, complete cds, clone: RAFL22-93-G21
          Length = 697

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 309 ctggcaaatagcagtgatatcagcagcactga 340
           |||||||||  |||||||||||||| ||||||
Sbjct: 132 ctggcaaatctcagtgatatcagcaccactga 101
to top
>gb|AC010244.6| Homo sapiens chromosome 5 clone CTC-364B20, complete sequence
          Length = 134937

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 184   ttgttgcctcatttgtagaagtca 207
             ||||| ||||||||||||||||||
Sbjct: 14573 ttgtttcctcatttgtagaagtca 14596
to top
>emb|BX814123.1|CNS0AEBL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZC05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1265

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 612 aatagcagtgatatcagcag 631
to top
>emb|BX814920.1|CNS0AE2A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS19ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1276

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 583 aatagcagtgatatcagcag 602
to top
>emb|BX841857.1|CNS09Y38 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS91ZC02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 817

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 630 aatagcagtgatatcagcag 649
to top
>gb|AC096765.3| Homo sapiens BAC clone RP11-678F16 from 2, complete sequence
          Length = 131691

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     aagagaaactttaggaagaaggaa 28
             ||||||||||||| ||||||||||
Sbjct: 50764 aagagaaactttaagaagaaggaa 50741
to top
>gb|AC079279.4|AC079279 Arabidopsis thaliana chromosome 1 BAC F17J6 genomic sequence, complete
             sequence
          Length = 92745

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aatagcagtgatatcagcag 334
             ||||||||||||||||||||
Sbjct: 18795 aatagcagtgatatcagcag 18814
to top
>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168134

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   gcagagggaactcaattttc 462
             ||||||||||||||||||||
Sbjct: 58789 gcagagggaactcaattttc 58808
to top
>gb|BT004358.1| Arabidopsis thaliana clone U20176 unknown protein (At1g50510) mRNA,
           complete cds
          Length = 1024

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 528 aatagcagtgatatcagcag 547
to top
>gb|BT002789.1| Arabidopsis thaliana clone RAFL15-04-J16 (R20176) unknown protein
           (At1g50510) mRNA, complete cds
          Length = 1225

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatagcagtgatatcagcag 334
           ||||||||||||||||||||
Sbjct: 616 aatagcagtgatatcagcag 635
to top
>gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11F12 genomic sequence, complete
             sequence
          Length = 105733

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   aatagcagtgatatcagcag 334
             ||||||||||||||||||||
Sbjct: 58974 aatagcagtgatatcagcag 58955
to top
>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete
              sequence
          Length = 227133

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    ccagcttcctggcaaatagc 320
              ||||||||||||||||||||
Sbjct: 202096 ccagcttcctggcaaatagc 202077
to top
>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18,
              complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    aaatagcagtgatatcagca 333
              ||||||||||||||||||||
Sbjct: 148042 aaatagcagtgatatcagca 148061
to top
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA,
            complete cds
          Length = 2638

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 309  ctggcaaatagcagtgatatcagcagcactga 340
            |||||||||  |||||||||||||| ||||||
Sbjct: 2181 ctggcaaatctcagtgatatcagcaccactga 2150


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,600,805
Number of Sequences: 3902068
Number of extensions: 4600805
Number of successful extensions: 80803
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80631
Number of HSP's gapped (non-prelim): 154
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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