>emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in linkage group 25,
             complete sequence
          Length = 182806

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 59    tgacagctgaaactattagcacaacaa 85
             |||| ||||||||||||||||||||||
Sbjct: 98251 tgactgctgaaactattagcacaacaa 98277

>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
             complete sequence
          Length = 229078

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 36    tatgaaattattaattgttacattg 60
             ||||||||||||||||| |||||||
Sbjct: 65232 tatgaaattattaattgatacattg 65208

>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8,
             complete sequence
          Length = 219913

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 36    tatgaaattattaattgttacattg 60
             ||||||||||||||||| |||||||
Sbjct: 83173 tatgaaattattaattgatacattg 83149

>gb|AC025566.22| Homo sapiens 3 BAC RP11-501O2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 200398

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     aattgttacattgacagctga 68
              |||||||||||||||||||||
Sbjct: 196642 aattgttacattgacagctga 196622

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 43      ttattaattgttacattgacagct 66
               |||||||||||| |||||||||||
Sbjct: 1247890 ttattaattgttgcattgacagct 1247913

>gb|AC155806.3| Mus musculus BAC clone RP24-308M10 from chromosome 7, complete sequence
          Length = 202336

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tccccaggggcggggtctag 168
             ||||||||||||||||||||
Sbjct: 48026 tccccaggggcggggtctag 48045

>gb|AC152499.17| Medicago truncatula clone mth2-56f20, complete sequence
          Length = 125561

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    aatactagtatgaaattattaatt 51
             ||||||||||| ||||||||||||
Sbjct: 59298 aatactagtatcaaattattaatt 59275

>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              4/6
          Length = 282183

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     ttattaattgttacattgacagct 66
              |||||||||||| |||||||||||
Sbjct: 186992 ttattaattgttgcattgacagct 187015

>gb|AC108725.5| Homo sapiens 3 BAC RP11-451J24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 84562

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaacatcagcagcacatgac 144
             ||||||||||||||||||||
Sbjct: 84542 aaacatcagcagcacatgac 84561

>tpg|BK002599.1| TPA: TPA_inf: Drosophila melanogaster HDC14054 (HDC14054) gene,
           complete cds
          Length = 1479

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 77  gcacaacaaaatgtccccaacggacagg 104
           |||||||||||||||||  |||||||||
Sbjct: 53  gcacaacaaaatgtcccttacggacagg 26

>gb|AC037441.12| Homo sapiens chromosome , clone RP11-87E22, complete sequence
          Length = 163147

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    tgacaggcaggaagggaaggctgg 293
              |||||||||||||||| |||||||
Sbjct: 107680 tgacaggcaggaagggtaggctgg 107657

>ref|NM_079884.3| Drosophila melanogaster Zn finger homeodomain 2 CG1449-RA (zfh2), mRNA
          Length = 10571

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaattattaattgttacattgaca 63
             ||||||||||| ||||||||||||
Sbjct: 10428 aaattattaatagttacattgaca 10405

>gb|AC093503.2| Homo sapiens chromosome 19 clone CTB-12A17, complete sequence
          Length = 147598

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    gacaggcaggaagggaaggc 290
              ||||||||||||||||||||
Sbjct: 101042 gacaggcaggaagggaaggc 101061

>gb|AC018478.4| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone
             BACH57F14, complete sequence
          Length = 103809

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaattattaattgttacattgaca 63
             ||||||||||| ||||||||||||
Sbjct: 84181 aaattattaatagttacattgaca 84158

>gb|AC010668.7| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone
             BACR44L03, complete sequence
          Length = 172190

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaattattaattgttacattgaca 63
             ||||||||||| ||||||||||||
Sbjct: 23971 aaattattaatagttacattgaca 23948

>gb|AC158231.2| Mus musculus BAC clone RP24-510K1 from chromosome 7, complete sequence
          Length = 207943

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    tccccaggggcggggtctag 168
              ||||||||||||||||||||
Sbjct: 121267 tccccaggggcggggtctag 121286

>gb|M63450.1|DROZFH2 Drosophila melanogaster zinc-finger homeodomain protein 2 (zfh-2) mRNA,
             complete cds
          Length = 10571

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaattattaattgttacattgaca 63
             ||||||||||| ||||||||||||
Sbjct: 10428 aaattattaatagttacattgaca 10405

>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
             BACR01E04, complete sequence
          Length = 172674

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 77    gcacaacaaaatgtccccaacggacagg 104
             |||||||||||||||||  |||||||||
Sbjct: 34003 gcacaacaaaatgtcccttacggacagg 33976

>gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
              BACR03M20, complete sequence
          Length = 175335

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 77     gcacaacaaaatgtccccaacggacagg 104
              |||||||||||||||||  |||||||||
Sbjct: 153856 gcacaacaaaatgtcccttacggacagg 153829

>gb|AC108702.3| Homo sapiens 3 BAC RP11-20B7 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 171106

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  aaacatcagcagcacatgac 144
            ||||||||||||||||||||
Sbjct: 1984 aaacatcagcagcacatgac 2003

>emb|BX004794.14| Zebrafish DNA sequence from clone DKEYP-79B10 in linkage group 12,
             complete sequence
          Length = 207058

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     atgaagccagcaagcagacg 22
             ||||||||||||||||||||
Sbjct: 93631 atgaagccagcaagcagacg 93612

>gb|AE003716.5| Drosophila melanogaster chromosome 3R, section 54 of 118 of the
             complete sequence
          Length = 220035

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 77    gcacaacaaaatgtccccaacggacagg 104
             |||||||||||||||||  |||||||||
Sbjct: 20578 gcacaacaaaatgtcccttacggacagg 20551

>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete
             sequence
          Length = 328561

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aaattattaattgttacattgaca 63
             ||||||||||| ||||||||||||
Sbjct: 70300 aaattattaatagttacattgaca 70277

>gb|AC103352.8| Mus musculus chromosome 8, clone RP23-418G1, complete sequence
          Length = 207330

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      catgaagccagcaagcagac 21
              ||||||||||||||||||||
Sbjct: 117805 catgaagccagcaagcagac 117786

>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence
          Length = 214994

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     catgaagccagcaagcagac 21
             ||||||||||||||||||||
Sbjct: 11782 catgaagccagcaagcagac 11763


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,186,338
Number of Sequences: 3902068
Number of extensions: 3186338
Number of successful extensions: 58241
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58198
Number of HSP's gapped (non-prelim): 43
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)