ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106744.1| Zea mays PCO111647 mRNA sequence 244 2e-61
2emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosyla... 161 3e-36
3ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group... 86 1e-13
4ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mR... 86 1e-13
7dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
9dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
10gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence 84 5e-13
11gb|AY105107.1| Zea mays PCO140468 mRNA sequence 84 5e-13
12gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase ... 80 8e-12
13gb|AY107002.1| Zea mays PCO111646 mRNA sequence 74 5e-10
14gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence 70 7e-09
15gb|AY106262.1| Zea mays PCO111648 mRNA sequence 70 7e-09
16gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase ... 68 3e-08
17gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase ... 68 3e-08
18emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransgl... 66 1e-07
19emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein 60 7e-06
20emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransgly... 60 7e-06
21gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase ... 60 7e-06
22gb|AY821734.1| Bromus tectorum beta amylase gene, partial cds 42 1.6
23ref|XM_603915.2| PREDICTED: Bos taurus similar to Neurturin prec... 42 1.6
24gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete se... 42 1.6
25gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 1.6
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28emb|BX640457.5| Zebrafish DNA sequence from clone DKEY-17A19 in ... 42 1.6
29gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 6.5
30ref|NM_195670.1| Oryza sativa (japonica cultivar-group) putative... 40 6.5
31gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, co... 40 6.5
32ref|XM_365763.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.5
33gb|AC006980.3| Homo sapiens BAC clone GS1-165G20 from 7, complet... 40 6.5
34ref|XM_390179.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.5
35gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, com... 40 6.5
36emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chr... 40 6.5
37emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chr... 40 6.5
38gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hos... 40 6.5
39emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 6.5
40emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.5
41gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
42emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chr... 40 6.5
43emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on ch... 40 6.5
44gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp... 40 6.5
45gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.5
46gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 40 6.5
47emb|CR407306.1| Gallus gallus finished cDNA, clone ChEST642m10 40 6.5
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
49gb|AF463767.1| Mus musculus strain C57BL/6J cytokine gene cluste... 40 6.5
50gb|AC098808.3| Papio anubis clone RP41-17K4, complete sequence 40 6.5
51gb|AC012527.7| Homo sapiens chromosome 15, clone RP11-44J20, com... 40 6.5
52dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
53gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
54emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, co... 40 6.5 
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence
          Length = 1267

 Score =  244 bits (123), Expect = 2e-61
 Identities = 263/309 (85%), Gaps = 3/309 (0%)
 Strand = Plus / Minus

                                                                       
Query: 171 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 230
           |||||| ||||  ||||||||||||||  || || ||||||||  | |||||   |||||
Sbjct: 936 atcagtggcgggcgcactcggcggggagtccttgcgggaacctccacccatcctggcagt 877

                                                                       
Query: 231 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 290
           |||||||||||||| | ||  ||||||||||| |||||||||||||||||| || ||| |
Sbjct: 876 agttgtagcgcatgaagttgcgctccgcccacctgacggtgccccactcggcgctgtcaa 817

                                                                       
Query: 291 gctgcctgttcatccacccgtcgctgccggcat---ggcaagcgccgccgctggcgcagg 347
           |||||||||||||||||||| ||||||||||     |||| |||||||||||| ||||||
Sbjct: 816 gctgcctgttcatccacccgccgctgccggcggcccggcacgcgccgccgctgacgcagg 757

                                                                       
Query: 348 cgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtcgatgggga 407
           || ||||||||||| |   |||  |||||  |||||| |||| |||||||||||||  ||
Sbjct: 756 cgctggcgtagtagctgcggtaggagacgacgaagggcgcgtcggaccagtcgatgccga 697

                                                                       
Query: 408 ccttgcccttctcggtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgg 467
           || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 696 ccctgcccttctcggtggcccagtagctgccgtcccacagcgtggcgtgcagcgtcatgg 637

                    
Query: 468 gcttggagc 476
           || ||||||
Sbjct: 636 gcctggagc 628



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 44/48 (91%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                            
Query: 72   cagggctgctttttaattacaaaattcacaaagaagaacaagaatcat 119
            ||||||||||||||||| || |||| ||||||||||| ||||||||||
Sbjct: 1041 cagggctgctttttaatcac-aaatccacaaagaagagcaagaatcat 995
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>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1
           gene), cultivated variety W64A
          Length = 1225

 Score =  161 bits (81), Expect = 3e-36
 Identities = 242/295 (82%), Gaps = 3/295 (1%)
 Strand = Plus / Minus

                                                                       
Query: 178 gcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgta 237
           ||||||||||||||  ||||  ||||| |||||||   |||| ||  |||||||||||||
Sbjct: 933 gcggctgcactcgggcgggaggccctgggggaaccgccagccgtcgtcgcagtagttgta 874

                                                                       
Query: 238 gcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcgagctgcct 297
           ||||||||| ||   ||| ||||||  ||||||||||||||||| | ||||| ||||| |
Sbjct: 873 gcgcatgtagttgctctcggcccaccggacggtgccccactcggcgtcgtcgggctgctt 814

                                                                       
Query: 298 gttcatccacccgtcg---ctgccggcatggcaagcgccgccgctggcgcaggcgttggc 354
           | ||||||||||||||   | |||| |   ||| || ||||||||| |||||||||||||
Sbjct: 813 gctcatccacccgtcgtcgccgccgccgccgcaggccccgccgctgacgcaggcgttggc 754

                                                                       
Query: 355 gtagtagtttttgtacaagacgttgaagggtgcgttggaccagtcgatggggaccttgcc 414
           | |||||     |||  |||||  |||||| |||  ||||||||| | ||| ||||||||
Sbjct: 753 ggagtagccccggtaggagacgacgaagggcgcggcggaccagtccacgggcaccttgcc 694

                                                                  
Query: 415 cttctcggtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggc 469
           ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 693 cttctcggtggcccagtagctgccgtcccacagcgtggcgtgcagcgccatgggc 639
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>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA
          Length = 1127

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 642 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 592



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 184 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 904 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 845

                                                             
Query: 244 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 844 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 795
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>ref|XM_480868.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1111

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 647 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 597



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 184 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 909 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 850

                                                             
Query: 244 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 849 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 800
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                  
Query: 422     gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
               ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 8322413 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 8322363



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                           
Query: 184     gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
               ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 8322675 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 8322616

                                                                 
Query: 244     gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
               ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 8322615 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 8322566
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>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
           endotransglycosylase-related protein 5, complete cds
          Length = 1280

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 638 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 588



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 184 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 900 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 841

                                                             
Query: 244 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 840 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 791
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>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0682A06
          Length = 142023

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                
Query: 422   gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
             ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 62522 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 62472



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                         
Query: 184   gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
             ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 62784 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 62725

                                                               
Query: 244   gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
             ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 62724 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 62675
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>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full
           insert sequence
          Length = 1111

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 647 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 597



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 184 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 909 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 850

                                                             
Query: 244 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 849 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 800
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>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full
           insert sequence
          Length = 1127

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggcttg 472
           ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 642 gtcgcccagtagctgccgtcccacagcgtcgcgtgcagcctcatcggcttg 592



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 184 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 243
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 904 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 845

                                                             
Query: 244 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 293
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 844 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 795
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>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence
          Length = 1156

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 340 ggcgcaggcgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtc 399
           ||||||||||||||||  ||||| |  |||  |||||  |||||| ||| ||||||||||
Sbjct: 624 ggcgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtc 565

                                                                       
Query: 400 gatggggaccttgcccttctcggtcgcccagtagctgccgtcccacagcgtggcgtgcag 459
           |||   ||||| ||||||    || |||||||||||||||||||||||||||||||||| 
Sbjct: 564 gatcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagcgtggcgtgcac 505

                         
Query: 460 cctcatgggcttgg 473
           |  |||||||||||
Sbjct: 504 cgccatgggcttgg 491
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>gb|AY105107.1| Zea mays PCO140468 mRNA sequence
          Length = 1297

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 340 ggcgcaggcgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtc 399
           ||||||||||||||||  ||||| |  |||  |||||  |||||| ||| ||||||||||
Sbjct: 788 ggcgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtc 729

                                                                       
Query: 400 gatggggaccttgcccttctcggtcgcccagtagctgccgtcccacagcgtggcgtgcag 459
           |||   ||||| ||||||    || |||||||||||||||||||||||||||||||||| 
Sbjct: 728 gatcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagcgtggcgtgcac 669

                         
Query: 460 cctcatgggcttgg 473
           |  |||||||||||
Sbjct: 668 cgccatgggcttgg 655
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>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA,
           complete cds
          Length = 1100

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                           
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggc 469
           ||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 639 gtcgcccagtagctgccgtcccacagcgtggcgtgcaccgtcatgggc 592



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 185 cactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtag 238
           |||||| ||||||| ||||  ||||||||  |||| || |||||||||||||||
Sbjct: 891 cactcgccggggaatcccttggggaacctccagccgtcggcgcagtagttgtag 838
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>gb|AY107002.1| Zea mays PCO111646 mRNA sequence
          Length = 776

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 60/65 (92%), Gaps = 2/65 (3%)
 Strand = Plus / Minus

                                                                       
Query: 407 accttgcccttctcggtcgccc-agtagctgccgtccc-acagcgtggcgtgcagcctca 464
           ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||  ||
Sbjct: 728 accttgcccttctcggtggccccagtagctgccgtccccacagcgtggcgtgcagcgcca 669

                
Query: 465 tgggc 469
           |||||
Sbjct: 668 tgggc 664
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>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 122/151 (80%)
 Strand = Plus / Minus

                                                                       
Query: 171 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 230
           |||||| ||||  ||||||||||||||| ||||| ||||| |   |||| ||  ||||||
Sbjct: 513 atcagttgcgggagcactcggcggggaagccctgcgggaatcgccagccgtcgtcgcagt 454

                                                                       
Query: 231 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 290
           |||||||| ||||||| || |||   |||||   ||||||||||||||||| | ||||||
Sbjct: 453 agttgtagtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcga 394

                                          
Query: 291 gctgcctgttcatccacccgtcgctgccggc 321
           |||| | | ||||||| | |||| |||||||
Sbjct: 393 gctggcggctcatccagcggtcggtgccggc 363



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggctt 471
           |||||||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 244 gcccagtagctgccgtcccacagcgtggcgtgcaccgacatgggctt 198
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>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 122/151 (80%)
 Strand = Plus / Minus

                                                                       
Query: 171 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 230
           |||||| ||||  ||||||||||||||| ||||| ||||| |   |||| ||  ||||||
Sbjct: 991 atcagttgcgggagcactcggcggggaagccctgcgggaagcgccagccgtcgtcgcagt 932

                                                                       
Query: 231 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 290
           |||||||| ||||||| || |||   |||||   ||||||||||||||||| | ||||||
Sbjct: 931 agttgtagtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcga 872

                                          
Query: 291 gctgcctgttcatccacccgtcgctgccggc 321
           |||| | | ||||||| | |||| |||||||
Sbjct: 871 gctggcggctcatccagcggtcggtgccggc 841



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggctt 471
           |||||||||||||||||||||||||||||||||| |  |||||||||
Sbjct: 722 gcccagtagctgccgtcccacagcgtggcgtgcaccgacatgggctt 676
to top
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA,
           complete cds
          Length = 938

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 421 ggtcgcccagtagctgccgtcccacagcgtggcgtgca 458
           |||||||||||||||||||||||| |||||||||||||
Sbjct: 643 ggtcgcccagtagctgccgtcccagagcgtggcgtgca 606



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 168 tggatcagtagcggctgcactcggcggggaa 198
           ||||||||| |||| ||||||||||||||||
Sbjct: 905 tggatcagttgcgggtgcactcggcggggaa 875



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 283 gccgtcgagctgcctgttcatccacccgtcgctgccggc 321
           |||| |||||| | ||||||||||| |||||||||||||
Sbjct: 790 gccgccgagctccgtgttcatccacgcgtcgctgccggc 752
to top
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA,
           complete cds
          Length = 958

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgcagcctcatgggct 470
           |||||||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 640 gcccagtagctgccgtcccagagcgtggcgtgcaccgtcatgggct 595



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 168 tggatcagtagcggctgcactcggcggggaa 198
           ||||||||| |||| ||||||||||||||||
Sbjct: 906 tggatcagttgcggttgcactcggcggggaa 876



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 283 gccgtcgagctgcctgttcatccacccgtcgctgccggc 321
           |||||||||||   ||||||||||| |||||||||||||
Sbjct: 791 gccgtcgagctctgtgttcatccacgcgtcgctgccggc 753
to top
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
          Length = 1110

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 422 gtcgcccagtagctgccgtcccacagcgtggcgtgca 458
           ||||||||||||||||||||||||||||| |||||||
Sbjct: 630 gtcgcccagtagctgccgtcccacagcgtcgcgtgca 594
to top
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein
          Length = 1189

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgca 458
           |||||||||||||||||||||||||| |||||||
Sbjct: 644 gcccagtagctgccgtcccacagcgtcgcgtgca 611
to top
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (PM5)
          Length = 1188

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgca 458
           |||||||||||||||||||| |||||||||||||
Sbjct: 651 gcccagtagctgccgtcccagagcgtggcgtgca 618
to top
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA,
           complete cds
          Length = 1107

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 425 gcccagtagctgccgtcccacagcgtggcgtgca 458
           |||||||||||||||||||| |||||||||||||
Sbjct: 640 gcccagtagctgccgtcccagagcgtggcgtgca 607



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 283 gccgtcgagctgcctgttcatccacccgtcgctgccggc 321
           ||||||||||| | ||||||||||| |||||||||||||
Sbjct: 791 gccgtcgagctccgtgttcatccacgcgtcgctgccggc 753



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 168 tggatcagtagcggctgcactcggcggggaa 198
           ||||||||| |||| ||||||||||||||||
Sbjct: 906 tggatcagttgcggttgcactcggcggggaa 876
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>gb|AY821734.1| Bromus tectorum beta amylase gene, partial cds
          Length = 1394

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 98  cacaaagaagaacaagaatca 118
           |||||||||||||||||||||
Sbjct: 287 cacaaagaagaacaagaatca 267
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>ref|XM_603915.2| PREDICTED: Bos taurus similar to Neurturin precursor (LOC525562),
           mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 330 cgccgccgctggcgcaggcgt 350
           |||||||||||||||||||||
Sbjct: 490 cgccgccgctggcgcaggcgt 470
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>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence
          Length = 195266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     aattacaaaattcacaaagaa 106
              |||||||||||||||||||||
Sbjct: 113004 aattacaaaattcacaaagaa 112984
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      aattacaaaattcacaaagaa 106
               |||||||||||||||||||||
Sbjct: 1248412 aattacaaaattcacaaagaa 1248392
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 85      taattacaaaattcacaaagaagaa 109
               ||||||||||||| |||||||||||
Sbjct: 6975959 taattacaaaattaacaaagaagaa 6975983
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>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0061B07
          Length = 124766

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 85    taattacaaaattcacaaagaagaa 109
             ||||||||||||| |||||||||||
Sbjct: 35386 taattacaaaattaacaaagaagaa 35410
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>emb|BX640457.5| Zebrafish DNA sequence from clone DKEY-17A19 in linkage group 19,
             complete sequence
          Length = 36582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     aataaaaattacatgcttctt 29
             |||||||||||||||||||||
Sbjct: 16293 aataaaaattacatgcttctt 16313
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       aaaggcgcaataaaaattac 20
               ||||||||||||||||||||
Sbjct: 1653215 aaaggcgcaataaaaattac 1653196
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>ref|NM_195670.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase
           (OSJNAa0053D03.20), mRNA
          Length = 549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cgccgccgctggcgcaggcg 349
           ||||||||||||||||||||
Sbjct: 183 cgccgccgctggcgcaggcg 202
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>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence
          Length = 184327

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 54     atcgcccacacgctgcctcagggctgcttttt 85
              ||||| ||||||||||||||||| ||| ||||
Sbjct: 172785 atcgctcacacgctgcctcagggatgcctttt 172816
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>ref|XM_365763.1| Magnaporthe grisea 70-15 hypothetical protein (MG02465.4) partial
            mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tggcgcaggcgttggcgtag 358
            ||||||||||||||||||||
Sbjct: 1177 tggcgcaggcgttggcgtag 1158
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>gb|AC006980.3| Homo sapiens BAC clone GS1-165G20 from 7, complete sequence
          Length = 25911

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   cagcctcatgggcttggagc 476
             ||||||||||||||||||||
Sbjct: 13349 cagcctcatgggcttggagc 13330
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>ref|XM_390179.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10003.1)
            partial mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tggcgcaggcgttggcgtag 358
            ||||||||||||||||||||
Sbjct: 1204 tggcgcaggcgttggcgtag 1185
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>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 54     atcgcccacacgctgcctcagggctgcttttt 85
              ||||| ||||||||||||||||| ||| ||||
Sbjct: 176101 atcgctcacacgctgcctcagggatgcctttt 176070
to top
>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a
             novel gene, the 5' end of the CAMTA1 gene for calmodulin
             binding transcription activator 1, a ribosomal protein L37
             (RPL37) pseudogene and a CpG island, complete sequence
          Length = 204394

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ctgctttttaattacaaaat 96
             ||||||||||||||||||||
Sbjct: 37640 ctgctttttaattacaaaat 37621
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>emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chromosome 9, complete
             sequence
          Length = 142368

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    aattacaaaattcacaaagaagaa 109
             ||||||||||| ||||||||||||
Sbjct: 60933 aattacaaaatacacaaagaagaa 60910
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>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     tcttttctgtaggaaaaatg 45
              ||||||||||||||||||||
Sbjct: 147012 tcttttctgtaggaaaaatg 146993
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     tttaattacaaaattcacaaagaa 106
              |||||| |||||||||||||||||
Sbjct: 970451 tttaataacaaaattcacaaagaa 970474
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      ttacaaaattcacaaagaag 107
               ||||||||||||||||||||
Sbjct: 1193603 ttacaaaattcacaaagaag 1193584
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>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0053D03,
              complete sequence
          Length = 150496

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    cgccgccgctggcgcaggcg 349
              ||||||||||||||||||||
Sbjct: 142636 cgccgccgctggcgcaggcg 142655
to top
>emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chromosome 11 Contains three
              novel genes, a ribosomal protein L9 (Rpl9) pseudogene, a
              transcription elongation factor A (SII) 3 (Tcea3)
              pseudogene and the 3' end of the Fbxw1b gene for F-box and
              WD-40 domain protein 1B, complete sequence
          Length = 251085

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     aaaattcacaaagaagaacaagaa 115
              |||||||||||||||||| |||||
Sbjct: 200549 aaaattcacaaagaagaaaaagaa 200526
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>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the
             3' end of the Vdac1 gene for voltage-dependent anion
             channel 1, a novel gene (9530068E07Rik), a
             ubiquinol-cytochrome c reductase subunit (Uqcr)
             pseudogene, a novel pseudogene, a ribosomal protein S28
             (Rps28) pseudogene and a CpG island, complete sequence
          Length = 165536

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    acatgcttcttttctgtagg 38
             ||||||||||||||||||||
Sbjct: 12000 acatgcttcttttctgtagg 12019
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>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    acaaaattcacaaagaagaa 109
             ||||||||||||||||||||
Sbjct: 19830 acaaaattcacaaagaagaa 19811
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>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0004A10, from chromosome 10, complete sequence
          Length = 144271

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cgccgccgctggcgcaggcg 349
             ||||||||||||||||||||
Sbjct: 92132 cgccgccgctggcgcaggcg 92113
to top
>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tgtaattttgctccgcccac 262
             ||||||||||||||||||||
Sbjct: 55134 tgtaattttgctccgcccac 55115
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>emb|CR407306.1| Gallus gallus finished cDNA, clone ChEST642m10
          Length = 1063

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 17  ttacatgcttcttttctgtaggaa 40
           |||||||||||||||||| |||||
Sbjct: 546 ttacatgcttcttttctggaggaa 523
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cgccgccgctggcgcaggcg 349
               ||||||||||||||||||||
Sbjct: 8339114 cgccgccgctggcgcaggcg 8339133
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>gb|AF463767.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 29772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    acatgcttcttttctgtagg 38
             ||||||||||||||||||||
Sbjct: 19259 acatgcttcttttctgtagg 19240
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>gb|AC098808.3| Papio anubis clone RP41-17K4, complete sequence
          Length = 157557

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    cagcctcatgggcttggagc 476
              ||||||||||||||||||||
Sbjct: 107255 cagcctcatgggcttggagc 107236
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>gb|AC012527.7| Homo sapiens chromosome 15, clone RP11-44J20, complete sequence
          Length = 162955

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   cagcctcatgggcttggagc 476
             ||||||||||||||||||||
Sbjct: 47555 cagcctcatgggcttggagc 47574
to top
>dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D10, full
           insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cgccgccgctggcgcaggcg 349
           ||||||||||||||||||||
Sbjct: 219 cgccgccgctggcgcaggcg 238
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     cgccgccgctggcgcaggcg 349
               ||||||||||||||||||||
Sbjct: 8344213 cgccgccgctggcgcaggcg 8344232
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>emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, complete sequence
          Length = 172942

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    aaaaattacatgcttcttttctgt 35
             |||||||| |||||||||||||||
Sbjct: 39067 aaaaattatatgcttcttttctgt 39090


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,411,217
Number of Sequences: 3902068
Number of extensions: 4411217
Number of successful extensions: 106447
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106179
Number of HSP's gapped (non-prelim): 253
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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